jgi.p|Nanoce1779_2|527081, mRNA_4089 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|527081
Unique Name	mRNA_4089
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4251
Alignment location	scaffold_8:808359..812741 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	527167
Track	FilteredModels2
ProteinId	527081

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_8	supercontig	scaffold_8:808359..812741 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|527081	gene_4089	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|527081	mRNA_4089-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_4089	CDS_4089	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_8:808359..812741+
coding sequence from alignment at scaffold_8:808359..812741+

mRNA sequence

>mRNA_4089 ID=mRNA_4089|Name=jgi.p|Nanoce1779_2|527081|organism=Nannochloropsis oceanica|type=mRNA|length=4251bp
ATGAAGGGCGAGACTGTAGCCTGGGCCGGCCTCTATAAGGTACGCCTGGG
GGGAGCGCGGCTCGACTTTCTACCCTTCCTCGTCATCTACGTCGCCCTTG
TTGCGGGAGTTTTTGCCCCTCTCTCACCTGAAAAGGCAGGCGAGGACCAA
AGCAGCAGCACTAGCAGCAGCACCACCAGCACCACCAGCCTTAGTACTGA
CAGCGGCGTAGCGCCCCTCTGGGTCTTGATCGTCTGGCCCTTGGTGTTGT
TGGCCCACCTGCTCACTCACCTCTCCACGCATTGGTCTGTGGCTTGCGAC
GCGACTGTCTCGTACGCGCGGGTTTCAACGGCACGTGAAGCCACTCACGT
CCGTGTCCGTCCGCCGCCCAACTCGGGGTCAGAGGAGATGGTGCCATTGC
TGCGCGTGGACGATGAAAGAGTGAGTGCAGAGAATTCATCGATTACGAGC
ATCACAGTAGTGGGACAAGAGCACCGCTTGCCTTTCGCGCGGTTCAGCTT
CCAGAAAACCCACTTTTGTTATTGGGACCGGATGGCGACTGCTCATGAAT
TTACGCGCTTGTCTTACCCGACCACGGGGCTCGTCCACCATTTCCTGCAA
CGACAGGGGTATGCAGAAGAAGGGGAGGTGAAATTGGCCACGCGACTGTG
GGGTGAAAATGTGTTTGACATCCCTCTTCCTCCCTTTCGGGACCTCTTCA
AGGAACATGCTGTGGCTCCGTTTTTTGTTTTCCAGGTATTGTGCGTGTTG
TTGTGGAGTCTGGATGAGTATTGGTACTACTCTTTATTTACCCTTGTTTT
GCTCGTGGTCTTTGAGTCGACTGTTTGCTATCAGCGGCAAAGGTCCTTGG
AAATGCTTCGTTCCATGCGTCGGCCTCCTTATCGTGTCTGGTGCTACAGG
GGAGAGCGCTGGCGCCTCCTTTCCAGTGAAGACCTCCTTCCAGGCGATTT
GATCTCACTAGGGAGGATGAATGCTCACCCTTCTTCTGGGGCCGATGCAG
AGGAAGAGGAGGAAGAAGCGGGATGTGGCCCCAAACGACGAGCAGCGGCA
GGAGGAGGATCGCTAGCCAAGTTTAAGGGCAGGGGAGGAGGAGCGCGTCG
AAGGGCAGGCTATCAACCACCACCACCACCACCACCAGAGCAGGAGGAGG
AGGCGACGCCGTCGGAGCGTCTGGTGCCGTGTGACTTATTGTTGTTGAGC
GGAACATGTATTGTGAACGAGGCGATGTTAACGGGGGAGAGCACTCCGCA
ATTGAAGGAGTTTTTGGAGATAGAAAATAGCAGATGGAGTAGCTGTAGTA
ATGGTAGTAGTGGCAAAATACGGTCCCACGTTGTCTTTGGAGGGACCAAG
ATCTTACAATTGGGTGGCACCAAGCAAGCCACCAACAGCAGCAGGAGCGG
CGGCAGCAGCAGCAGCGGCAGTGTTCCTGCACCACCAGACAAGGGAGGGG
CGGTCGCCTTCGTCCTCCGAACGGGGTTTGAGACAAGCCAAGGCCAATTG
ATGCGGACCATCATATTCGCCACGCGTCGGGTCACAGCCGGTTCGGCTGA
AACAGCCGTATTTATTGGTATTCTCCTCCTCTTCGCCGTGGTTGCCTCCG
GGATAGTCCTCCTTGAGGGCCTGAAGGACGAAAGCCGGAATCGGTTCAAA
CTGCTCTTGCATTGCATCATGATTATAACCTCGGTTGTGCCCCCTGAGCT
ACCCATGGAGCTTTCTCTCGCTGTGACCAACTCGCTCGCAGCGCTGACGA
AGAGTTTGGTTTACTGCACAGAGCCGTTTCGGATACCATACGCAGGCAAG
GTCACCGTGTGTTGTTTCGACAAAACAGGGACCCTGACGTCGGACGACTT
AGTCTTGCGAGGAGTGGTGCCGCTCGTTAGCGACAGCAGTGGAAAGGAGG
GAGAGCTGGAGGGAGGAAAAGATGGTAGCATCATCGTCAATGGAGGTACA
AGTGGGAATGGAGGAAAGAAGAAGGTGGTGGAGGAAACGATACTTTCCCC
TGATCAAGTGGCCGGGCCGGCATTATGGGTGTTGGTGGCTTGTCATTCGT
TGATGACGGTCGAGGGGAGGGTAGCTGGTGACCCGATGGAGTGTGCAGCA
GTGGATGGGTTAGGCTGGATGGTTGCGAGCAATGGGGACGCTGTTATGCC
GAACCCGACGTCGACATCGATGCGCCAGCAGCAGCAGCAGCAAAAGCAAC
AACAACAAGGAAAGGCGGAGAGAGGGGAGATGAATGAGGATCTTGCGCCT
ATTAGGCTTCACCATCGATATCCGTTCAACTCCACCCTGCGTCGGATGTC
CGTCCTTGCCTCCCGCTCCTTGCCCTCCGCTTCGCCCCATTCTTCTTCCC
ATCAACAACAACTCCTCATCCTCACTAAAGGCGCCCCCGAAGCAATTCGC
CCTCTTCTTTCCACCGTGCCCCCCCACTACACCTCCACCTACCTCTACCA
CATGGGCCGCGGTCGTCGTGTGCTTGCCCTTGCATATCGCATCCTGCCCC
CTGAGACCCAATATGAGACTGTCCGCCATTTCTCCCGAGAAGATGTGGAG
GAGAAGTTGCACCTTGCTGGTCTATTAATTGTTGACTGTCCCTTGAAAAA
AGATACGGGGGGCGTGATCAAGGCGCTGCGCGAATCCAGACATCGTACTG
TGATGATAACGGGGGACTCTGCCTTAACAGCAGCCGAGGTAGCGAGGCAG
ATTAGAATGGTACCACACGGACCAGAGAGGACGTTGCAGTTGGTTCGTAG
GAGGATGAGCGGGGGGAAAGAAGGGAAGACGGGCAGGAGGGGGGAGATGG
GATGGGAGCCTATGGCGAATATGGTGGAGGAGGTGGTGAAGCACGAGGGG
GACGGGAAAGGGAGAGAAGGAGCGAGATTTATCCCGTTCAGGGCAGAGGA
GATGAGGAGTTTGGCGGAGAAGTTTTCTTTGTGTGTGGGAGGCGAGGCAT
TGGCTGATCTTGTGGAAAGAGAGGCGCGTTCCTTCTCCTCGTCCTCCCAC
ACCTCCGCGGCATTGTTCACAGCGGAGAAAGAGGGATTAGACAGCAGCAT
CAACGGTGCCACGACCACCTCCAGCAACAGTCGAGCAGGGAGCATGTCTC
GGGAAACCCTCCGTTGGCTCTCTAAAATCTGTCCGCACGTCGTGGTCTTC
GCCCGCGTCGCCCCCGACCAAAAAGAAATGCTTATTGCTTCCCTGAACGA
AGCAGGGGATGTGACGTTGATGTGTGGAGATGGGACAAATGACGTAGGGG
CCTTAAAGCAAGCCCATGTCGGCGTTTCCATAATCAATTCACCGGAGCTC
GAAAAGCGCACAGAGGCCACTAGTGCCAAATATGAATTCAAGTTGGCTGC
AATGGGTGCAGGGAAAAAGGGAAATGCTTCTCGAGCGCAGGTGCAAGCAG
CAGCAGGTTTGAGTGGGGGAGGGTCGTCGGAGGAAGAAATTTCACAGATG
GCACAGATTTTGGCGGAGCTCCGGGAGCAGGAGAAGGACCCAGCGATTGT
GCAATTGGGAGATGCGTCGATTGCGTCTCCATTCACGGCAAAACGGACGT
CGGTGGAGTGTGTGTTGGCGGTGGTGCGTCAGGGGCGATGCACATTGGTG
ACAACCTTGCAGGTTTACAAGATTCTGGCATTGAACTGCCTGGTCTCCGC
ATACATGCTCTCGTCCCTTTACCTCTTCGGTGTCAAGCAAGGCGATCTGC
AAATGACTGCTCTGGGACTGGCTGTTGCAGCATTGTTCTTCTTCGTGAGT
CGCGCTGAGCCGTTGGAACGCTTGTCGGCTGAGAGGCCGCCTGCTCGTAT
TTTTTGCGCGCAAGTCTGTGTGTCGATCGCGCTGCAATTTTTGGTTCACT
TAGGGTGTCTAGTGAATACGCTGGAGAGGGCGAAGCCGCTGATGAAACTA
ACAAGCAAGGATCCCAGCATTGCCCCGGATGGTCCGTTTCGACCCAATCT
TGTCAATACGGCCATATTCCTCCTGTCGGCTGTGACGCAGGTGAACACTT
TCACGGCCAACTATCGCGGGCATCCATTCATGCAGAGTTTGGGTGAGAAT
AAAATGCTCGGCAGGTTTACCGTGGGTTTGTATGCCGTCCTGATGATGCT
GGCGCTTGAAATAGTTCCGATATTCAATCATTGGTTACAGCTTGTTCATT
TGCCGGGGCCTTTCCGACGGCATTTGGTTACTGTGTTGCTGTTGGACACT
GGTGCGGTTTTGACGATTGAGCAGTTGTGCTTGCGCTTCTTGCCTGCGTA
G

protein sequence of jgi.p|Nanoce1779_2|527081

>mRNA_4089-protein ID=mRNA_4089-protein|Name=jgi.p|Nanoce1779_2|527081|organism=Nannochloropsis oceanica|type=polypeptide|length=1417bp
MKGETVAWAGLYKVRLGGARLDFLPFLVIYVALVAGVFAPLSPEKAGEDQ
SSSTSSSTTSTTSLSTDSGVAPLWVLIVWPLVLLAHLLTHLSTHWSVACD
ATVSYARVSTAREATHVRVRPPPNSGSEEMVPLLRVDDERVSAENSSITS
ITVVGQEHRLPFARFSFQKTHFCYWDRMATAHEFTRLSYPTTGLVHHFLQ
RQGYAEEGEVKLATRLWGENVFDIPLPPFRDLFKEHAVAPFFVFQVLCVL
LWSLDEYWYYSLFTLVLLVVFESTVCYQRQRSLEMLRSMRRPPYRVWCYR
GERWRLLSSEDLLPGDLISLGRMNAHPSSGADAEEEEEEAGCGPKRRAAA
GGGSLAKFKGRGGGARRRAGYQPPPPPPPEQEEEATPSERLVPCDLLLLS
GTCIVNEAMLTGESTPQLKEFLEIENSRWSSCSNGSSGKIRSHVVFGGTK
ILQLGGTKQATNSSRSGGSSSSGSVPAPPDKGGAVAFVLRTGFETSQGQL
MRTIIFATRRVTAGSAETAVFIGILLLFAVVASGIVLLEGLKDESRNRFK
LLLHCIMIITSVVPPELPMELSLAVTNSLAALTKSLVYCTEPFRIPYAGK
VTVCCFDKTGTLTSDDLVLRGVVPLVSDSSGKEGELEGGKDGSIIVNGGT
SGNGGKKKVVEETILSPDQVAGPALWVLVACHSLMTVEGRVAGDPMECAA
VDGLGWMVASNGDAVMPNPTSTSMRQQQQQQKQQQQGKAERGEMNEDLAP
IRLHHRYPFNSTLRRMSVLASRSLPSASPHSSSHQQQLLILTKGAPEAIR
PLLSTVPPHYTSTYLYHMGRGRRVLALAYRILPPETQYETVRHFSREDVE
EKLHLAGLLIVDCPLKKDTGGVIKALRESRHRTVMITGDSALTAAEVARQ
IRMVPHGPERTLQLVRRRMSGGKEGKTGRRGEMGWEPMANMVEEVVKHEG
DGKGREGARFIPFRAEEMRSLAEKFSLCVGGEALADLVEREARSFSSSSH
TSAALFTAEKEGLDSSINGATTTSSNSRAGSMSRETLRWLSKICPHVVVF
ARVAPDQKEMLIASLNEAGDVTLMCGDGTNDVGALKQAHVGVSIINSPEL
EKRTEATSAKYEFKLAAMGAGKKGNASRAQVQAAAGLSGGGSSEEEISQM
AQILAELREQEKDPAIVQLGDASIASPFTAKRTSVECVLAVVRQGRCTLV
TTLQVYKILALNCLVSAYMLSSLYLFGVKQGDLQMTALGLAVAALFFFVS
RAEPLERLSAERPPARIFCAQVCVSIALQFLVHLGCLVNTLERAKPLMKL
TSKDPSIAPDGPFRPNLVNTAIFLLSAVTQVNTFTANYRGHPFMQSLGEN
KMLGRFTVGLYAVLMMLALEIVPIFNHWLQLVHLPGPFRRHLVTVLLLDT
GAVLTIEQLCLRFLPA*

mRNA from alignment at scaffold_8:808359..812741+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_4089 ID=mRNA_4089|Name=jgi.p|Nanoce1779_2|527081|organism=Nannochloropsis oceanica|type=mRNA|length=4383bp|location=Sequence derived from alignment at scaffold_8:808359..812741+ (Nannochloropsis oceanica)
ATGAAGGGCGAGACTGTAGCCTGGGCCGGCCTCTATAAGGTACGCCTGGG
GGGAGCGCGGCTCGACTTTCTACCCTTCCTCGTCATCTACGTCGCCCTTG
TTGCGGGAGTTTTTGCCCCTCTCTCACCTGAAAAGGCAGGCGAGGACCAA
AGCAGCAGCACTAGCAGCAGCACCACCAGCACCACCAGCCTTAGTACTGA
CAGCGGCGTAGCGCCCCTCTGGGTCTTGATCGTCTGGCCCTTGGTGTTGT
TGGCCCACCTGCTCACTCACCTCTCCACGCATTGGTCTGTGGCTTGCGAC
GCGACTGTCTCGTACGCGCGGGTTTCAACGGCACGTGAAGCCACTCACGT
CCGTGTCCGTCCGCCGCCCAACTCGGGGTCAGAGGAGATGGTGCCATTGC
TGCGCGTGGACGATGAAAGAGTGAGTGCAGAGAATTCATCGATTACGAGC
ATCACAGTAGTGGGACAAGAGCACCGCTTGCCTTTCGCGCGGTTCAGCTT
CCAGAAAACCCACTTTTGTTATTGGGACCGGATGGCGACTGCTCATGAAT
TTACGCGCTTGTCTTACCCGACCACGGGGCTCGTCCACCATTTCCTGCAA
CGACAGGGGTATGCAGAAGAAGGGGAGGTGAAATTGGCCACGCGACTGTG
GGGTGAAAATGTGTTTGACATCCCTCTTCCTCCCTTTCGGGACCTCTTCA
AGGAACATGCTGTGGCTCCGTTTTTTGTTTTCCAGGTATTGTGCGTGTTG
TTGTGGAGTCTGGATGAGTATTGGTACTACTCTTTATTTACCCTTGTTTT
GCTCGTGGTCTTTGAGTCGACTGTTTGCTATCAGCGGCAAAGGTCCTTGG
AAATGCTTCGTTCCATGCGTCGGCCTCCTTATCGTGTCTGGTGCTACAGG
GGAGAGCGCTGGCGCCTCCTTTCCAGTGAAGACCTCCTTCCAGGCGATTT
GATCTCACTAGGGAGGATGAATGCTCACCCTTCTTCTGGGGCCGATGCAG
AGGAAGAGGAGGAAGAAGCGGGATGTGGCCCCAAACGACGAGCAGCGGCA
GGAGGAGGATCGCTAGCCAAGTTTAAGGGCAGGGGAGGAGGAGCGCGTCG
AAGGGCAGGCTATCAACCACCACCACCACCACCACCAGAGCAGGAGGAGG
AGGCGACGCCGTCGGAGCGTCTGGTGCCGTGTGACTTATTGTTGTTGAGC
GGAACATGTATTGTGAACGAGGCGATGTTAACGGGGGAGAGCACTCCGCA
ATTGAAGGAGTTTTTGGAGATAGAAAATAGCAGATGGAGTAGCTGTAGTA
ATGGTAGTAGTGGCAAAAGTGGCAGGAACAGGAAGAAGAAGGGGAAGGGG
AAGGTCGAAGAAGAGGTGGAGGAGGAGGAGGAGCAGGAGTATGGTTTGGC
GCCACCGCCGTTGTTTTCTCTGGGTCCTGGCGTGTCGGTGGACGCTGAAG
TACGGTCCCACGTTGTCTTTGGAGGGACCAAGATCTTACAATTGGGTGGC
ACCAAGCAAGCCACCAACAGCAGCAGGAGCGGCGGCAGCAGCAGCAGCGG
CAGTGTTCCTGCACCACCAGACAAGGGAGGGGCGGTCGCCTTCGTCCTCC
GAACGGGGTTTGAGACAAGCCAAGGCCAATTGATGCGGACCATCATATTC
GCCACGCGTCGGGTCACAGCCGGTTCGGCTGAAACAGCCGTATTTATTGG
TATTCTCCTCCTCTTCGCCGTGGTTGCCTCCGGGATAGTCCTCCTTGAGG
GCCTGAAGGACGAAAGCCGGAATCGGTTCAAACTGCTCTTGCATTGCATC
ATGATTATAACCTCGGTTGTGCCCCCTGAGCTACCCATGGAGCTTTCTCT
CGCTGTGACCAACTCGCTCGCAGCGCTGACGAAGAGTTTGGTTTACTGCA
CAGAGCCGTTTCGGATACCATACGCAGGCAAGGTCACCGTGTGTTGTTTC
GACAAAACAGGGACCCTGACGTCGGACGACTTAGTCTTGCGAGGAGTGGT
GCCGCTCGTTAGCGACAGCAGTGGAAAGGAGGGAGAGCTGGAGGGAGGAA
AAGATGGTAGCATCATCGTCAATGGAGGTACAAGTGGGAATGGAGGAAAG
AAGAAGGTGGTGGAGGAAACGATACTTTCCCCTGATCAAGTGGCCGGGCC
GGCATTATGGGTGTTGGTGGCTTGTCATTCGTTGATGACGGTCGAGGGGA
GGGTAGCTGGTGACCCGATGGAGTGTGCAGCAGTGGATGGGTTAGGCTGG
ATGGTTGCGAGCAATGGGGACGCTGTTATGCCGAACCCGACGTCGACATC
GATGCGCCAGCAGCAGCAGCAGCAAAAGCAACAACAACAAGGAAAGGCGG
AGAGAGGGGAGATGAATGAGGATCTTGCGCCTATTAGGCTTCACCATCGA
TATCCGTTCAACTCCACCCTGCGTCGGATGTCCGTCCTTGCCTCCCGCTC
CTTGCCCTCCGCTTCGCCCCATTCTTCTTCCCATCAACAACAACTCCTCA
TCCTCACTAAAGGCGCCCCCGAAGCAATTCGCCCTCTTCTTTCCACCGTG
CCCCCCCACTACACCTCCACCTACCTCTACCACATGGGCCGCGGTCGTCG
TGTGCTTGCCCTTGCATATCGCATCCTGCCCCCTGAGACCCAATATGAGA
CTGTCCGCCATTTCTCCCGAGAAGATGTGGAGGAGAAGTTGCACCTTGCT
GGTCTATTAATTGTTGACTGTCCCTTGAAAAAAGATACGGGGGGCGTGAT
CAAGGCGCTGCGCGAATCCAGACATCGTACTGTGATGATAACGGGGGACT
CTGCCTTAACAGCAGCCGAGGTAGCGAGGCAGATTAGAATGGTACCACAC
GGACCAGAGAGGACGTTGCAGTTGGTTCGTAGGAGGATGAGCGGGGGGAA
AGAAGGGAAGACGGGCAGGAGGGGGGAGATGGGATGGGAGCCTATGGCGA
ATATGGTGGAGGAGGTGGTGAAGCACGAGGGGGACGGGAAAGGGAGAGAA
GGAGCGAGATTTATCCCGTTCAGGGCAGAGGAGATGAGGAGTTTGGCGGA
GAAGTTTTCTTTGTGTGTGGGAGGCGAGGCATTGGCTGATCTTGTGGAAA
GAGAGGCGCGTTCCTTCTCCTCGTCCTCCCACACCTCCGCGGCATTGTTC
ACAGCGGAGAAAGAGGGATTAGACAGCAGCATCAACGGTGCCACGACCAC
CTCCAGCAACAGTCGAGCAGGGAGCATGTCTCGGGAAACCCTCCGTTGGC
TCTCTAAAATCTGTCCGCACGTCGTGGTCTTCGCCCGCGTCGCCCCCGAC
CAAAAAGAAATGCTTATTGCTTCCCTGAACGAAGCAGGGGATGTGACGTT
GATGTGTGGAGATGGGACAAATGACGTAGGGGCCTTAAAGCAAGCCCATG
TCGGCGTTTCCATAATCAATTCACCGGAGCTCGAAAAGCGCACAGAGGCC
ACTAGTGCCAAATATGAATTCAAGTTGGCTGCAATGGGTGCAGGGAAAAA
GGGAAATGCTTCTCGAGCGCAGGTGCAAGCAGCAGCAGGTTTGAGTGGGG
GAGGGTCGTCGGAGGAAGAAATTTCACAGATGGCACAGATTTTGGCGGAG
CTCCGGGAGCAGGAGAAGGACCCAGCGATTGTGCAATTGGGAGATGCGTC
GATTGCGTCTCCATTCACGGCAAAACGGACGTCGGTGGAGTGTGTGTTGG
CGGTGGTGCGTCAGGGGCGATGCACATTGGTGACAACCTTGCAGGTTTAC
AAGATTCTGGCATTGAACTGCCTGGTCTCCGCATACATGCTCTCGTCCCT
TTACCTCTTCGGTGTCAAGCAAGGCGATCTGCAAATGACTGCTCTGGGAC
TGGCTGTTGCAGCATTGTTCTTCTTCGTGAGTCGCGCTGAGCCGTTGGAA
CGCTTGTCGGCTGAGAGGCCGCCTGCTCGTATTTTTTGCGCGCAAGTCTG
TGTGTCGATCGCGCTGCAATTTTTGGTTCACTTAGGGTGTCTAGTGAATA
CGCTGGAGAGGGCGAAGCCGCTGATGAAACTAACAAGCAAGGATCCCAGC
ATTGCCCCGGATGGTCCGTTTCGACCCAATCTTGTCAATACGGCCATATT
CCTCCTGTCGGCTGTGACGCAGGTGAACACTTTCACGGCCAACTATCGCG
GGCATCCATTCATGCAGAGTTTGGGTGAGAATAAAATGCTCGGCAGGTTT
ACCGTGGGTTTGTATGCCGTCCTGATGATGCTGGCGCTTGAAATAGTTCC
GATATTCAATCATTGGTTACAGCTTGTTCATTTGCCGGGGCCTTTCCGAC
GGCATTTGGTTACTGTGTTGCTGTTGGACACTGGTGCGGTTTTGACGATT
GAGCAGTTGTGCTTGCGCTTCTTGCCTGCGTAG

Coding sequence (CDS) from alignment at scaffold_8:808359..812741+

>mRNA_4089 ID=mRNA_4089|Name=jgi.p|Nanoce1779_2|527081|organism=Nannochloropsis oceanica|type=CDS|length=8502bp|location=Sequence derived from alignment at scaffold_8:808359..812741+ (Nannochloropsis oceanica)
ATGAAGGGCGAGACTGTAGCCTGGGCCGGCCTCTATAAGGTACGCCTGGG
GGGAGCGCGGCTCGACTTTCTACCCTTCCTCGTCATCTACGTCGCCCTTG
TTGCGGGAGTTTTTGCCCCTCTCTCACCTGAAAAGGCAGGCGAGGACCAA
AGCAGCAGCACTAGCAGCAGCACCACCAGCACCACCAGCCTTAGTACTGA
CAGCGGCGTAGCGCCCCTCTGGGTCTTGATCGTCTGGCCCTTGGTGTTGT
TGGCCCACCTGCTCACTCACCTCTCCACGCATTGGTCTGTGGCTTGCGAC
GCGACTGTCTCGTACGCGCGGGTTTCAACGGCACGTGAAGCCACTCACGT
CCGTGTCCGTCCGCCGCCCAACTCGGGGTCAGAGGAGATGGTGCCATTGC
TGCGCGTGGACGATGAAAGAGTGAGTGCAGAGAATTCATCGATTACGAGC
ATCACAGTAGTGGGACAAGAGCACCGCTTGCCTTTCGCGCGGTTCAGCTT
CCAGAAAACCCACTTTTGTTATTGGGACCGGATGGCGACTGCTCATGAAT
TTACGCGCTTGTCTTACCCGACCACGGGGCTCGTCCACCATTTCCTGCAA
CGACAGGGGTATGCAGAAGAAGGGGAGGTGAAATTGGCCACGCGACTGTG
GGGTGAAAATGTGTTTGACATCCCTCTTCCTCCCTTTCGGGACCTCTTCA
AGGAACATGCTGTGGCTCCGTTTTTTGTTTTCCAGGTATTGTGCGTGTTG
TTGTGGAGTCTGGATGAGTATTGGTACTACTCTTTATTTACCCTTGTTTT
GCTCGTGGTCTTTGAGTCGACTGTTTGCTATCAGCGGCAAAGGTCCTTGG
AAATGCTTCGTTCCATGCGTCGGCCTCCTTATCGTGTCTGGTGCTACAGG
GGAGAGCGCTGGCGCCTCCTTTCCAGTGAAGACCTCCTTCCAGGCGATTT
GATCTCACTAGGGAGGATGAATGCTCACCCTTCTTCTGGGGCCGATGCAG
AGGAAGAGGAGGAAGAAGCGGGATGTGGCCCCAAACGACGAGCAGCGGCA
GGAGGAGGATCGCTAGCCAAGTTTAAGGGCAGGGGAGGAGGAGCGCGTCG
AAGGGCAGGCTATCAACCACCACCACCACCACCACCAGAGCAGGAGGAGG
AGGCGACGCCGTCGGAGCGTCTGGTGCCGTGTGACTTATTGTTGTTGAGC
GGAACATGTATTGTGAACGAGGCGATGTTAACGGGGGAGAGCACTCCGCA
ATTGAAGGAGTTTTTGGAGATAGAAAATAGCAGATGGAGTAGCTGTAGTA
ATGGTAGTAGTGGCAAAATACGGTCCCACGTTGTCTTTGGAGGGACCAAG
ATCTTACAATTGGGTGGCACCAAGCAAGCCACCAACAGCAGCAGGAGCGG
CGGCAGCAGCAGCAGCGGCAGTGTTCCTGCACCACCAGACAAGGGAGGGG
CGGTCGCCTTCGTCCTCCGAACGGGGTTTGAGACAAGCCAAGGCCAATTG
ATGCGGACCATCATATTCGCCACGCGTCGGGTCACAGCCGGTTCGGCTGA
AACAGCCGTATTTATTGGTATTCTCCTCCTCTTCGCCGTGGTTGCCTCCG
GGATAGTCCTCCTTGAGGGCCTGAAGGACGAAAGCCGGAATCGGTTCAAA
CTGCTCTTGCATTGCATCATGATTATAACCTCGGTTGTGCCCCCTGAGCT
ACCCATGGAGCTTTCTCTCGCTGTGACCAACTCGCTCGCAGCGCTGACGA
AGAGTTTGGTTTACTGCACAGAGCCGTTTCGGATACCATACGCAGGCAAG
GTCACCGTGTGTTGTTTCGACAAAACAGGGACCCTGACGTCGGACGACTT
AGTCTTGCGAGGAGTGGTGCCGCTCGTTAGCGACAGCAGTGGAAAGGAGG
GAGAGCTGGAGGGAGGAAAAGATGGTAGCATCATCGTCAATGGAGGTACA
AGTGGGAATGGAGGAAAGAAGAAGGTGGTGGAGGAAACGATACTTTCCCC
TGATCAAGTGGCCGGGCCGGCATTATGGGTGTTGGTGGCTTGTCATTCGT
TGATGACGGTCGAGGGGAGGGTAGCTGGTGACCCGATGGAGTGTGCAGCA
GTGGATGGGTTAGGCTGGATGGTTGCGAGCAATGGGGACGCTGTTATGCC
GAACCCGACGTCGACATCGATGCGCCAGCAGCAGCAGCAGCAAAAGCAAC
AACAACAAGGAAAGGCGGAGAGAGGGGAGATGAATGAGGATCTTGCGCCT
ATTAGGCTTCACCATCGATATCCGTTCAACTCCACCCTGCGTCGGATGTC
CGTCCTTGCCTCCCGCTCCTTGCCCTCCGCTTCGCCCCATTCTTCTTCCC
ATCAACAACAACTCCTCATCCTCACTAAAGGCGCCCCCGAAGCAATTCGC
CCTCTTCTTTCCACCGTGCCCCCCCACTACACCTCCACCTACCTCTACCA
CATGGGCCGCGGTCGTCGTGTGCTTGCCCTTGCATATCGCATCCTGCCCC
CTGAGACCCAATATGAGACTGTCCGCCATTTCTCCCGAGAAGATGTGGAG
GAGAAGTTGCACCTTGCTGGTCTATTAATTGTTGACTGTCCCTTGAAAAA
AGATACGGGGGGCGTGATCAAGGCGCTGCGCGAATCCAGACATCGTACTG
TGATGATAACGGGGGACTCTGCCTTAACAGCAGCCGAGGTAGCGAGGCAG
ATTAGAATGGTACCACACGGACCAGAGAGGACGTTGCAGTTGGTTCGTAG
GAGGATGAGCGGGGGGAAAGAAGGGAAGACGGGCAGGAGGGGGGAGATGG
GATGGGAGCCTATGGCGAATATGGTGGAGGAGGTGGTGAAGCACGAGGGG
GACGGGAAAGGGAGAGAAGGAGCGAGATTTATCCCGTTCAGGGCAGAGGA
GATGAGGAGTTTGGCGGAGAAGTTTTCTTTGTGTGTGGGAGGCGAGGCAT
TGGCTGATCTTGTGGAAAGAGAGGCGCGTTCCTTCTCCTCGTCCTCCCAC
ACCTCCGCGGCATTGTTCACAGCGGAGAAAGAGGGATTAGACAGCAGCAT
CAACGGTGCCACGACCACCTCCAGCAACAGTCGAGCAGGGAGCATGTCTC
GGGAAACCCTCCGTTGGCTCTCTAAAATCTGTCCGCACGTCGTGGTCTTC
GCCCGCGTCGCCCCCGACCAAAAAGAAATGCTTATTGCTTCCCTGAACGA
AGCAGGGGATGTGACGTTGATGTGTGGAGATGGGACAAATGACGTAGGGG
CCTTAAAGCAAGCCCATGTCGGCGTTTCCATAATCAATTCACCGGAGCTC
GAAAAGCGCACAGAGGCCACTAGTGCCAAATATGAATTCAAGTTGGCTGC
AATGGGTGCAGGGAAAAAGGGAAATGCTTCTCGAGCGCAGGTGCAAGCAG
CAGCAGGTTTGAGTGGGGGAGGGTCGTCGGAGGAAGAAATTTCACAGATG
GCACAGATTTTGGCGGAGCTCCGGGAGCAGGAGAAGGACCCAGCGATTGT
GCAATTGGGAGATGCGTCGATTGCGTCTCCATTCACGGCAAAACGGACGT
CGGTGGAGTGTGTGTTGGCGGTGGTGCGTCAGGGGCGATGCACATTGGTG
ACAACCTTGCAGGTTTACAAGATTCTGGCATTGAACTGCCTGGTCTCCGC
ATACATGCTCTCGTCCCTTTACCTCTTCGGTGTCAAGCAAGGCGATCTGC
AAATGACTGCTCTGGGACTGGCTGTTGCAGCATTGTTCTTCTTCGTGAGT
CGCGCTGAGCCGTTGGAACGCTTGTCGGCTGAGAGGCCGCCTGCTCGTAT
TTTTTGCGCGCAAGTCTGTGTGTCGATCGCGCTGCAATTTTTGGTTCACT
TAGGGTGTCTAGTGAATACGCTGGAGAGGGCGAAGCCGCTGATGAAACTA
ACAAGCAAGGATCCCAGCATTGCCCCGGATGGTCCGTTTCGACCCAATCT
TGTCAATACGGCCATATTCCTCCTGTCGGCTGTGACGCAGGTGAACACTT
TCACGGCCAACTATCGCGGGCATCCATTCATGCAGAGTTTGGGTGAGAAT
AAAATGCTCGGCAGGTTTACCGTGGGTTTGTATGCCGTCCTGATGATGCT
GGCGCTTGAAATAGTTCCGATATTCAATCATTGGTTACAGCTTGTTCATT
TGCCGGGGCCTTTCCGACGGCATTTGGTTACTGTGTTGCTGTTGGACACT
GGTGCGGTTTTGACGATTGAGCAGTTGTGCTTGCGCTTCTTGCCTGCGTA
GATGAAGGGCGAGACTGTAGCCTGGGCCGGCCTCTATAAGGTACGCCTGG
GGGGAGCGCGGCTCGACTTTCTACCCTTCCTCGTCATCTACGTCGCCCTT
GTTGCGGGAGTTTTTGCCCCTCTCTCACCTGAAAAGGCAGGCGAGGACCA
AAGCAGCAGCACTAGCAGCAGCACCACCAGCACCACCAGCCTTAGTACTG
ACAGCGGCGTAGCGCCCCTCTGGGTCTTGATCGTCTGGCCCTTGGTGTTG
TTGGCCCACCTGCTCACTCACCTCTCCACGCATTGGTCTGTGGCTTGCGA
CGCGACTGTCTCGTACGCGCGGGTTTCAACGGCACGTGAAGCCACTCACG
TCCGTGTCCGTCCGCCGCCCAACTCGGGGTCAGAGGAGATGGTGCCATTG
CTGCGCGTGGACGATGAAAGAGTGAGTGCAGAGAATTCATCGATTACGAG
CATCACAGTAGTGGGACAAGAGCACCGCTTGCCTTTCGCGCGGTTCAGCT
TCCAGAAAACCCACTTTTGTTATTGGGACCGGATGGCGACTGCTCATGAA
TTTACGCGCTTGTCTTACCCGACCACGGGGCTCGTCCACCATTTCCTGCA
ACGACAGGGGTATGCAGAAGAAGGGGAGGTGAAATTGGCCACGCGACTGT
GGGGTGAAAATGTGTTTGACATCCCTCTTCCTCCCTTTCGGGACCTCTTC
AAGGAACATGCTGTGGCTCCGTTTTTTGTTTTCCAGGTATTGTGCGTGTT
GTTGTGGAGTCTGGATGAGTATTGGTACTACTCTTTATTTACCCTTGTTT
TGCTCGTGGTCTTTGAGTCGACTGTTTGCTATCAGCGGCAAAGGTCCTTG
GAAATGCTTCGTTCCATGCGTCGGCCTCCTTATCGTGTCTGGTGCTACAG
GGGAGAGCGCTGGCGCCTCCTTTCCAGTGAAGACCTCCTTCCAGGCGATT
TGATCTCACTAGGGAGGATGAATGCTCACCCTTCTTCTGGGGCCGATGCA
GAGGAAGAGGAGGAAGAAGCGGGATGTGGCCCCAAACGACGAGCAGCGGC
AGGAGGAGGATCGCTAGCCAAGTTTAAGGGCAGGGGAGGAGGAGCGCGTC
GAAGGGCAGGCTATCAACCACCACCACCACCACCACCAGAGCAGGAGGAG
GAGGCGACGCCGTCGGAGCGTCTGGTGCCGTGTGACTTATTGTTGTTGAG
CGGAACATGTATTGTGAACGAGGCGATGTTAACGGGGGAGAGCACTCCGC
AATTGAAGGAGTTTTTGGAGATAGAAAATAGCAGATGGAGTAGCTGTAGT
AATGGTAGTAGTGGCAAAATACGGTCCCACGTTGTCTTTGGAGGGACCAA
GATCTTACAATTGGGTGGCACCAAGCAAGCCACCAACAGCAGCAGGAGCG
GCGGCAGCAGCAGCAGCGGCAGTGTTCCTGCACCACCAGACAAGGGAGGG
GCGGTCGCCTTCGTCCTCCGAACGGGGTTTGAGACAAGCCAAGGCCAATT
GATGCGGACCATCATATTCGCCACGCGTCGGGTCACAGCCGGTTCGGCTG
AAACAGCCGTATTTATTGGTATTCTCCTCCTCTTCGCCGTGGTTGCCTCC
GGGATAGTCCTCCTTGAGGGCCTGAAGGACGAAAGCCGGAATCGGTTCAA
ACTGCTCTTGCATTGCATCATGATTATAACCTCGGTTGTGCCCCCTGAGC
TACCCATGGAGCTTTCTCTCGCTGTGACCAACTCGCTCGCAGCGCTGACG
AAGAGTTTGGTTTACTGCACAGAGCCGTTTCGGATACCATACGCAGGCAA
GGTCACCGTGTGTTGTTTCGACAAAACAGGGACCCTGACGTCGGACGACT
TAGTCTTGCGAGGAGTGGTGCCGCTCGTTAGCGACAGCAGTGGAAAGGAG
GGAGAGCTGGAGGGAGGAAAAGATGGTAGCATCATCGTCAATGGAGGTAC
AAGTGGGAATGGAGGAAAGAAGAAGGTGGTGGAGGAAACGATACTTTCCC
CTGATCAAGTGGCCGGGCCGGCATTATGGGTGTTGGTGGCTTGTCATTCG
TTGATGACGGTCGAGGGGAGGGTAGCTGGTGACCCGATGGAGTGTGCAGC
AGTGGATGGGTTAGGCTGGATGGTTGCGAGCAATGGGGACGCTGTTATGC
CGAACCCGACGTCGACATCGATGCGCCAGCAGCAGCAGCAGCAAAAGCAA
CAACAACAAGGAAAGGCGGAGAGAGGGGAGATGAATGAGGATCTTGCGCC
TATTAGGCTTCACCATCGATATCCGTTCAACTCCACCCTGCGTCGGATGT
CCGTCCTTGCCTCCCGCTCCTTGCCCTCCGCTTCGCCCCATTCTTCTTCC
CATCAACAACAACTCCTCATCCTCACTAAAGGCGCCCCCGAAGCAATTCG
CCCTCTTCTTTCCACCGTGCCCCCCCACTACACCTCCACCTACCTCTACC
ACATGGGCCGCGGTCGTCGTGTGCTTGCCCTTGCATATCGCATCCTGCCC
CCTGAGACCCAATATGAGACTGTCCGCCATTTCTCCCGAGAAGATGTGGA
GGAGAAGTTGCACCTTGCTGGTCTATTAATTGTTGACTGTCCCTTGAAAA
AAGATACGGGGGGCGTGATCAAGGCGCTGCGCGAATCCAGACATCGTACT
GTGATGATAACGGGGGACTCTGCCTTAACAGCAGCCGAGGTAGCGAGGCA
GATTAGAATGGTACCACACGGACCAGAGAGGACGTTGCAGTTGGTTCGTA
GGAGGATGAGCGGGGGGAAAGAAGGGAAGACGGGCAGGAGGGGGGAGATG
GGATGGGAGCCTATGGCGAATATGGTGGAGGAGGTGGTGAAGCACGAGGG
GGACGGGAAAGGGAGAGAAGGAGCGAGATTTATCCCGTTCAGGGCAGAGG
AGATGAGGAGTTTGGCGGAGAAGTTTTCTTTGTGTGTGGGAGGCGAGGCA
TTGGCTGATCTTGTGGAAAGAGAGGCGCGTTCCTTCTCCTCGTCCTCCCA
CACCTCCGCGGCATTGTTCACAGCGGAGAAAGAGGGATTAGACAGCAGCA
TCAACGGTGCCACGACCACCTCCAGCAACAGTCGAGCAGGGAGCATGTCT
CGGGAAACCCTCCGTTGGCTCTCTAAAATCTGTCCGCACGTCGTGGTCTT
CGCCCGCGTCGCCCCCGACCAAAAAGAAATGCTTATTGCTTCCCTGAACG
AAGCAGGGGATGTGACGTTGATGTGTGGAGATGGGACAAATGACGTAGGG
GCCTTAAAGCAAGCCCATGTCGGCGTTTCCATAATCAATTCACCGGAGCT
CGAAAAGCGCACAGAGGCCACTAGTGCCAAATATGAATTCAAGTTGGCTG
CAATGGGTGCAGGGAAAAAGGGAAATGCTTCTCGAGCGCAGGTGCAAGCA
GCAGCAGGTTTGAGTGGGGGAGGGTCGTCGGAGGAAGAAATTTCACAGAT
GGCACAGATTTTGGCGGAGCTCCGGGAGCAGGAGAAGGACCCAGCGATTG
TGCAATTGGGAGATGCGTCGATTGCGTCTCCATTCACGGCAAAACGGACG
TCGGTGGAGTGTGTGTTGGCGGTGGTGCGTCAGGGGCGATGCACATTGGT
GACAACCTTGCAGGTTTACAAGATTCTGGCATTGAACTGCCTGGTCTCCG
CATACATGCTCTCGTCCCTTTACCTCTTCGGTGTCAAGCAAGGCGATCTG
CAAATGACTGCTCTGGGACTGGCTGTTGCAGCATTGTTCTTCTTCGTGAG
TCGCGCTGAGCCGTTGGAACGCTTGTCGGCTGAGAGGCCGCCTGCTCGTA
TTTTTTGCGCGCAAGTCTGTGTGTCGATCGCGCTGCAATTTTTGGTTCAC
TTAGGGTGTCTAGTGAATACGCTGGAGAGGGCGAAGCCGCTGATGAAACT
AACAAGCAAGGATCCCAGCATTGCCCCGGATGGTCCGTTTCGACCCAATC
TTGTCAATACGGCCATATTCCTCCTGTCGGCTGTGACGCAGGTGAACACT
TTCACGGCCAACTATCGCGGGCATCCATTCATGCAGAGTTTGGGTGAGAA
TAAAATGCTCGGCAGGTTTACCGTGGGTTTGTATGCCGTCCTGATGATGC
TGGCGCTTGAAATAGTTCCGATATTCAATCATTGGTTACAGCTTGTTCAT
TTGCCGGGGCCTTTCCGACGGCATTTGGTTACTGTGTTGCTGTTGGACAC
TGGTGCGGTTTTGACGATTGAGCAGTTGTGCTTGCGCTTCTTGCCTGCGT
AG

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