jgi.p|Nanoce1779_2|527081, gene_4089 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|527081
Unique Namegene_4089
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_8:808359..812741 +

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Properties
Property NameValue
TranscriptId527167
ProteinId527081
Product namecation transporting ATPase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_8supercontigscaffold_8:808359..812741 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006812cation transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016887ATPase activity
GO:0005524ATP binding
GO:0015662ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL004ncniL004Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO10G01290NO10G01290Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|527081mRNA_4089-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|527081mRNA_4089Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|527081

>mRNA_4089-protein ID=mRNA_4089-protein|Name=jgi.p|Nanoce1779_2|527081|organism=Nannochloropsis oceanica|type=polypeptide|length=1417bp
MKGETVAWAGLYKVRLGGARLDFLPFLVIYVALVAGVFAPLSPEKAGEDQ
SSSTSSSTTSTTSLSTDSGVAPLWVLIVWPLVLLAHLLTHLSTHWSVACD
ATVSYARVSTAREATHVRVRPPPNSGSEEMVPLLRVDDERVSAENSSITS
ITVVGQEHRLPFARFSFQKTHFCYWDRMATAHEFTRLSYPTTGLVHHFLQ
RQGYAEEGEVKLATRLWGENVFDIPLPPFRDLFKEHAVAPFFVFQVLCVL
LWSLDEYWYYSLFTLVLLVVFESTVCYQRQRSLEMLRSMRRPPYRVWCYR
GERWRLLSSEDLLPGDLISLGRMNAHPSSGADAEEEEEEAGCGPKRRAAA
GGGSLAKFKGRGGGARRRAGYQPPPPPPPEQEEEATPSERLVPCDLLLLS
GTCIVNEAMLTGESTPQLKEFLEIENSRWSSCSNGSSGKIRSHVVFGGTK
ILQLGGTKQATNSSRSGGSSSSGSVPAPPDKGGAVAFVLRTGFETSQGQL
MRTIIFATRRVTAGSAETAVFIGILLLFAVVASGIVLLEGLKDESRNRFK
LLLHCIMIITSVVPPELPMELSLAVTNSLAALTKSLVYCTEPFRIPYAGK
VTVCCFDKTGTLTSDDLVLRGVVPLVSDSSGKEGELEGGKDGSIIVNGGT
SGNGGKKKVVEETILSPDQVAGPALWVLVACHSLMTVEGRVAGDPMECAA
VDGLGWMVASNGDAVMPNPTSTSMRQQQQQQKQQQQGKAERGEMNEDLAP
IRLHHRYPFNSTLRRMSVLASRSLPSASPHSSSHQQQLLILTKGAPEAIR
PLLSTVPPHYTSTYLYHMGRGRRVLALAYRILPPETQYETVRHFSREDVE
EKLHLAGLLIVDCPLKKDTGGVIKALRESRHRTVMITGDSALTAAEVARQ
IRMVPHGPERTLQLVRRRMSGGKEGKTGRRGEMGWEPMANMVEEVVKHEG
DGKGREGARFIPFRAEEMRSLAEKFSLCVGGEALADLVEREARSFSSSSH
TSAALFTAEKEGLDSSINGATTTSSNSRAGSMSRETLRWLSKICPHVVVF
ARVAPDQKEMLIASLNEAGDVTLMCGDGTNDVGALKQAHVGVSIINSPEL
EKRTEATSAKYEFKLAAMGAGKKGNASRAQVQAAAGLSGGGSSEEEISQM
AQILAELREQEKDPAIVQLGDASIASPFTAKRTSVECVLAVVRQGRCTLV
TTLQVYKILALNCLVSAYMLSSLYLFGVKQGDLQMTALGLAVAALFFFVS
RAEPLERLSAERPPARIFCAQVCVSIALQFLVHLGCLVNTLERAKPLMKL
TSKDPSIAPDGPFRPNLVNTAIFLLSAVTQVNTFTANYRGHPFMQSLGEN
KMLGRFTVGLYAVLMMLALEIVPIFNHWLQLVHLPGPFRRHLVTVLLLDT
GAVLTIEQLCLRFLPA*
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Synonyms
Publications