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Properties
Property Name | Value |
TranscriptId | 582916 |
Track | FilteredModels2 |
ProteinId | 582830 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_6 | supercontig | scaffold_6:814338..816429 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_3630 ID=mRNA_3630|Name=jgi.p|Nanoce1779_2|582830|organism=Nannochloropsis oceanica|type=mRNA|length=1502bp ACAGAACGATGCCCCCAAATGATGCCTGGGCGATCATCCGCAATTTCGGA TCGGAACTTTCTTTCCCCACCTACAAGCAACAAGGGACTGGCATGGCGGA CGTGCCATACCTGGAGTTGATAGTCCTCTTCTCCTTCATCGTCTTTGTCT TTGAGTTCTACCTGGACCTGCGGCAGTACGGGGCCTTGCAACGCAAGGAC GTGCCTGAAGCCTTGACGACACGCATCAGCGAGCTCGATCAGGCAGCCGC GTCGAAGAATGGAGGAGACTCGAAGGACAAGGATGGCACCACGACCCTGC TCGCTCGTTTGACCTCGAAATTTGAAGCTGCAAGAAAATATTCTATTGAT AAGGCGCATCTTGGGTTTGTTGAAACTCTCTTCTCCCAAATGGAAGCGAC GGCGATGCTCTTGCTTGGAAGTATGCCTTGGGTATGGGACATGTCGGTCA ACTTAGCCGGGAAATGGTTTGGGAAAGCAGAAGACGAGTATATCATCTCT CTCGTCTTCCTAGGTATCAACATGGTGATTGAGAATATCATCCACCTACC CTTCTCCCTTTGGTCCGTCTTTGTGGTCGAGCAACGGCATGGTTTCAACA AGCAGTCCCTCAAGGACTTCCTCCTTGATAAAGTCAAGGCCGTCGCCCTC TCGGCCCTCCTCGGCAGCCCTATGACCGTCGCTGTCCTCTATGTCATCAA AGCCGGCGGTCGAAACTTTTTCCTCTACCTCTACCTTCTCGTGCTCGCCT TCCAGCTCATTCTCCTCACAGTCTATCCTACCGTCATCGCTCCAATCTTC AATAAATACGAACCTCTGGCGGAAGAATCTGAATTAAAACCTCAAATTGA CGCCTTGGCATCGCGGGTGAAGTTTCCGTTGACCAAGGTGTTTGTGGTAG ATGGATCGCGGAGAAGTGCGCATTCAAACGCGTATTTTTATGGGTTTTTT AAGAATAAGCGGATTGTGCTGTTTGATACGCTGCTGACGCAGGTGCAATC CTCGGAGCTGATTTCGATCCTCGCCCACGAGCTCGGGCACTGGGCGCACA GCCACACCCTCCAAATGTTTTTCGTCAGTCAAGTGCACCTCTTCCTGGCC TTCTTCCTCTTCTCCTCTTCTCTGGACAACGCCGACCTATTCCATTCGTT TGGCTTCGCGACTCGCCCCACGATCATTGCTCTATTCCTCTTTTTTCAAG CGATTTGGTCCCCGGTTGACAAGGCGTTGAGCTTTGGCTTCACGTTGTGG ACCCGCAAAAACGAGTTCCAGGCAGACGAATACGCAGTCGATCTGGGTTA CGCCGAGGACTTACAGCGAGGGCTGGTCAAGCTGCAGGTTGAGAATCTTT CCAACCCCTCCCCTGATCGATGGTATAGCTTCTACCATTACTCCCACCCG CCTCTGACGGAGCGATTGGCAGCAATATGTGCGCGGCAAGAGGGGAGGGA GAAGAAGAGGGGGTGAGGGAGGTAGATGAGGGAGGGAGGGAGCGAAGGGG GG back to topprotein sequence of jgi.p|Nanoce1779_2|582830 >mRNA_3630-protein ID=mRNA_3630-protein|Name=jgi.p|Nanoce1779_2|582830|organism=Nannochloropsis oceanica|type=polypeptide|length=486bp MPPNDAWAIIRNFGSELSFPTYKQQGTGMADVPYLELIVLFSFIVFVFEF YLDLRQYGALQRKDVPEALTTRISELDQAAASKNGGDSKDKDGTTTLLAR LTSKFEAARKYSIDKAHLGFVETLFSQMEATAMLLLGSMPWVWDMSVNLA GKWFGKAEDEYIISLVFLGINMVIENIIHLPFSLWSVFVVEQRHGFNKQS LKDFLLDKVKAVALSALLGSPMTVAVLYVIKAGGRNFFLYLYLLVLAFQL ILLTVYPTVIAPIFNKYEPLAEESELKPQIDALASRVKFPLTKVFVVDGS RRSAHSNAYFYGFFKNKRIVLFDTLLTQVQSSELISILAHELGHWAHSHT LQMFFVSQVHLFLAFFLFSSSLDNADLFHSFGFATRPTIIALFLFFQAIW SPVDKALSFGFTLWTRKNEFQADEYAVDLGYAEDLQRGLVKLQVENLSNP SPDRWYSFYHYSHPPLTERLAAICARQEGREKKRG* back to topmRNA from alignment at scaffold_6:814338..816429+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_3630 ID=mRNA_3630|Name=jgi.p|Nanoce1779_2|582830|organism=Nannochloropsis oceanica|type=mRNA|length=2092bp|location=Sequence derived from alignment at scaffold_6:814338..816429+ (Nannochloropsis oceanica) ACAGAACGATGCCCCCAAATGATGCCTGGGCGATCATCCGCAATTTCGGA
TCGGAACTTTCTTTCCCCACCTACAAGCAACAAGGGACTGGCATGGCGGA
CGTGCCATACCTGGAGTTGATAGTCCTCTTCTCCTTCATCGTCTTTGTCT
TTGAGTTCTACCTGGACCTGCGGCAGTACGGGGCCTTGCAACGCAAGGAC
GTGCCTGAAGCCTTGACGACACGCATCAGCGAGCTCGATCAGGCAGCCGC
GTCGAAGAATGGAGGAGACTCGAAGGACAAGGATGGCACCACGACCCTGC
TCGCTCGTTTGACCTCGAAATTTGAAGCTGCAAGAAAATATTCTATTGAT
AAGGCGCATCTTGGGTTTGTTGAAACTCTCTTCTCCCAAATGGAAGCGAC
GGCGATGCTCTTGCTTGGAAGTATGCCTTGGGTATGGGACATGTCGGTCA
ACTTAGCCGGGAAATGGTTTGGGAAAGCAGAAGACGAGTATATCATCTCT
CTCGTCTTCCTAGGTATCAACATGGTGATTGAGAATATCATCCACCTACC
CTTCTCCCTTTGGTCCGTCTTTGTGGTCGAGCAACGGCATGGTTTCAACA
AGCAGTCCCTCAAGGACTTCCTCCTTGATAAAGTCAAGGCCGTCGCCCTC
TCGGCCCTCCTCGGCAGCCCTATGACCGTCGCTGTCCTCTATGTCATCAA
AGCCGGCGGTCGAAACTTTTTCCTCTACCTCTACCTTCTCGTGCTCGCCT
TCCAGCTCATTCTCCTCACAGTCTATCCTACCGTCATCGCTCCAATCTTC
AATAAATACGAACCTCTGGCGGAAGAATCTGAATTAAAACCTCAAATTGA
CGCCTTGGCATCGCGGGTGAAGTTTCCGTTGACCAAGGTGTTTGTGGTAG
ATGGATCGCGGAGAAGTGCGCATTCAAACGCGTATTTTTATGGGTTTTTT
AAGAATAAGCGGATTGTGCTGTTTGATACGCTGCTGACGCAGGTAGGTAT
GGAGGAAGGGAAGCAGAAATGGTTGGAGTGAGCGTGAGAAGGTTGAACGA
AGAAGTTTACGGTTTGTGAATATGTCCGACTCACTTCGCCTATCGTCCCC
TCTTCCACAGGTGCAATCCTCGGAGCTGATTTCGATCCTCGCCCACGAGC
TCGGGCACTGGGCGCACAGCCACACCCTCCAAATGTTTTTCGTCAGTCAA
GTGCACCTCTTCCTGGCCTTCTTCCTCTTCTCCTCTTCTCTGGACAACGC
CGACCTATTCCATTCGTTTGGCTTCGCGACTCGCCCCACGATCATTGCTC
TATTCCTCTTTTTTCAAGCGATTTGGTCCCCGGTTGACAAGGCGTTGAGC
TTTGGCTTCACGTTGTGGACCCGCAAAAACGAGTTCCAGGTAGGGAGCGG
AGGGTAAGAAGGGCGCGACGGAGGCAGGGAGGGAGCAAGACATTGGAAAA
AAGGCTTTAAGTGTGGGACATGGTCCTTACATTTCGTCTTTACCAATCTC
CTTTGCCTCCTCCCCCCATTCCTCCTGTTTTGGAGGGGTTGATACGCCAT
CGTTCCAGGCTCCAGCAAAGGCTTGCAACGCGGCCACGAGAAACAGCACA
TTTACACTTTATCCGACTTTCCCCTTGTCGGAAAGTTGCGATTCAATCAT
TCTTCTCATCCTTACCCCCCCTCTTTTCAGGCAGACGAATACGCAGTCGA
TCTGGGTTACGCCGAGGACTTACAGCGAGGGCTGGTCAAGCTGCAGGTAG
GTCTCCCTCGTCCCCCCCTCCCCCTCTCTCTAGCGCGTACCTCGAGTCGA
GAACCACCACGCCCCGTCACGTCTCTTGTTGTTCGATTGCCCCTCCTGGC
CCATGTCTATCTCATCGATTCACGCTCACATTCCTGCACGCATTACTGTA
TCCTCATACTCACGTTCTCGCATTCAGGTTGAGAATCTTTCCAACCCCTC
CCCTGATCGATGGTATAGCTTCTACCATTACTCCCACCCGCCTCTGACGG
AGCGATTGGCAGCAATATGTGCGCGGCAAGAGGGGAGGGAGAAGAAGAGG
GGGTGAGGGAGGTAGATGAGGGAGGGAGGGAGCGAAGGGGGG back to topCoding sequence (CDS) from alignment at scaffold_6:814338..816429+ >mRNA_3630 ID=mRNA_3630|Name=jgi.p|Nanoce1779_2|582830|organism=Nannochloropsis oceanica|type=CDS|length=5832bp|location=Sequence derived from alignment at scaffold_6:814338..816429+ (Nannochloropsis oceanica) ATGCCCCCAAATGATGCCTGGGCGATCATCCGCAATTTCGGATCGGAACT TTCTTTCCCCACCTACAAGCAACAAGGGACTGGCATGGCGGACGTGCCAT ACCTGGAGTTGATAGTCCTCTTCTCCTTCATCGTCTTTGTCTTTGAGTTC TACCTGGACCTGCGGCAGTACGGGGCCTTGCAACGCAAGGACGTGCCTGA AGCCTTGACGACACGCATCAGCGAGCTCGATCAGGCAGCCGCGTCGAAGA ATGGAGGAGACTCGAAGGACAAGGATGGCACCACGACCCTGCTCGCTCGT TTGACCTCGAAATTTGAAGCTGCAAGAAAATATTCTATTGATAAGGCGCA TCTTGGGTTTGTTGAAACTCTCTTCTCCCAAATGGAAGCGACGGCGATGC TCTTGCTTGGAAGTATGCCTTGGGTATGGGACATGTCGGTCAACTTAGCC GGGAAATGGTTTGGGAAAGCAGAAGACGAGTATATCATCTCTCTCGTCTT CCTAGGTATCAACATGGTGATTGAGAATATCATCCACCTACCCTTCTCCC TTTGGTCCGTCTTTGTGGTCGAGCAACGGCATGGTTTCAACAAGCAGTCC CTCAAGGACTTCCTCCTTGATAAAGTCAAGGCCGTCGCCCTCTCGGCCCT CCTCGGCAGCCCTATGACCGTCGCTGTCCTCTATGTCATCAAAGCCGGCG GTCGAAACTTTTTCCTCTACCTCTACCTTCTCGTGCTCGCCTTCCAGCTC ATTCTCCTCACAGTCTATCCTACCGTCATCGCTCCAATCTTCAATAAATA CGAACCTCTGGCGGAAGAATCTGAATTAAAACCTCAAATTGACGCCTTGG CATCGCGGGTGAAGTTTCCGTTGACCAAGGTGTTTGTGGTAGATGGATCG CGGAGAAGTGCGCATTCAAACGCGTATTTTTATGGGTTTTTTAAGAATAA GCGGATTGTGCTGTTTGATACGCTGCTGACGCAGGTGCAATCCTCGGAGC TGATTTCGATCCTCGCCCACGAGCTCGGGCACTGGGCGCACAGCCACACC CTCCAAATGTTTTTCGTCAGTCAAGTGCACCTCTTCCTGGCCTTCTTCCT CTTCTCCTCTTCTCTGGACAACGCCGACCTATTCCATTCGTTTGGCTTCG CGACTCGCCCCACGATCATTGCTCTATTCCTCTTTTTTCAAGCGATTTGG TCCCCGGTTGACAAGGCGTTGAGCTTTGGCTTCACGTTGTGGACCCGCAA AAACGAGTTCCAGGCAGACGAATACGCAGTCGATCTGGGTTACGCCGAGG ACTTACAGCGAGGGCTGGTCAAGCTGCAGGTTGAGAATCTTTCCAACCCC TCCCCTGATCGATGGTATAGCTTCTACCATTACTCCCACCCGCCTCTGAC GGAGCGATTGGCAGCAATATGTGCGCGGCAAGAGGGGAGGGAGAAGAAGA GGGGGTGAATGCCCCCAAATGATGCCTGGGCGATCATCCGCAATTTCGGA TCGGAACTTTCTTTCCCCACCTACAAGCAACAAGGGACTGGCATGGCGGA CGTGCCATACCTGGAGTTGATAGTCCTCTTCTCCTTCATCGTCTTTGTCT TTGAGTTCTACCTGGACCTGCGGCAGTACGGGGCCTTGCAACGCAAGGAC GTGCCTGAAGCCTTGACGACACGCATCAGCGAGCTCGATCAGGCAGCCGC GTCGAAGAATGGAGGAGACTCGAAGGACAAGGATGGCACCACGACCCTGC TCGCTCGTTTGACCTCGAAATTTGAAGCTGCAAGAAAATATTCTATTGAT AAGGCGCATCTTGGGTTTGTTGAAACTCTCTTCTCCCAAATGGAAGCGAC GGCGATGCTCTTGCTTGGAAGTATGCCTTGGGTATGGGACATGTCGGTCA ACTTAGCCGGGAAATGGTTTGGGAAAGCAGAAGACGAGTATATCATCTCT CTCGTCTTCCTAGGTATCAACATGGTGATTGAGAATATCATCCACCTACC CTTCTCCCTTTGGTCCGTCTTTGTGGTCGAGCAACGGCATGGTTTCAACA AGCAGTCCCTCAAGGACTTCCTCCTTGATAAAGTCAAGGCCGTCGCCCTC TCGGCCCTCCTCGGCAGCCCTATGACCGTCGCTGTCCTCTATGTCATCAA AGCCGGCGGTCGAAACTTTTTCCTCTACCTCTACCTTCTCGTGCTCGCCT TCCAGCTCATTCTCCTCACAGTCTATCCTACCGTCATCGCTCCAATCTTC AATAAATACGAACCTCTGGCGGAAGAATCTGAATTAAAACCTCAAATTGA CGCCTTGGCATCGCGGGTGAAGTTTCCGTTGACCAAGGTGTTTGTGGTAG ATGGATCGCGGAGAAGTGCGCATTCAAACGCGTATTTTTATGGGTTTTTT AAGAATAAGCGGATTGTGCTGTTTGATACGCTGCTGACGCAGGTGCAATC CTCGGAGCTGATTTCGATCCTCGCCCACGAGCTCGGGCACTGGGCGCACA GCCACACCCTCCAAATGTTTTTCGTCAGTCAAGTGCACCTCTTCCTGGCC TTCTTCCTCTTCTCCTCTTCTCTGGACAACGCCGACCTATTCCATTCGTT TGGCTTCGCGACTCGCCCCACGATCATTGCTCTATTCCTCTTTTTTCAAG CGATTTGGTCCCCGGTTGACAAGGCGTTGAGCTTTGGCTTCACGTTGTGG ACCCGCAAAAACGAGTTCCAGGCAGACGAATACGCAGTCGATCTGGGTTA CGCCGAGGACTTACAGCGAGGGCTGGTCAAGCTGCAGGTTGAGAATCTTT CCAACCCCTCCCCTGATCGATGGTATAGCTTCTACCATTACTCCCACCCG CCTCTGACGGAGCGATTGGCAGCAATATGTGCGCGGCAAGAGGGGAGGGA GAAGAAGAGGGGGTGAATGCCCCCAAATGATGCCTGGGCGATCATCCGCA ATTTCGGATCGGAACTTTCTTTCCCCACCTACAAGCAACAAGGGACTGGC ATGGCGGACGTGCCATACCTGGAGTTGATAGTCCTCTTCTCCTTCATCGT CTTTGTCTTTGAGTTCTACCTGGACCTGCGGCAGTACGGGGCCTTGCAAC GCAAGGACGTGCCTGAAGCCTTGACGACACGCATCAGCGAGCTCGATCAG GCAGCCGCGTCGAAGAATGGAGGAGACTCGAAGGACAAGGATGGCACCAC GACCCTGCTCGCTCGTTTGACCTCGAAATTTGAAGCTGCAAGAAAATATT CTATTGATAAGGCGCATCTTGGGTTTGTTGAAACTCTCTTCTCCCAAATG GAAGCGACGGCGATGCTCTTGCTTGGAAGTATGCCTTGGGTATGGGACAT GTCGGTCAACTTAGCCGGGAAATGGTTTGGGAAAGCAGAAGACGAGTATA TCATCTCTCTCGTCTTCCTAGGTATCAACATGGTGATTGAGAATATCATC CACCTACCCTTCTCCCTTTGGTCCGTCTTTGTGGTCGAGCAACGGCATGG TTTCAACAAGCAGTCCCTCAAGGACTTCCTCCTTGATAAAGTCAAGGCCG TCGCCCTCTCGGCCCTCCTCGGCAGCCCTATGACCGTCGCTGTCCTCTAT GTCATCAAAGCCGGCGGTCGAAACTTTTTCCTCTACCTCTACCTTCTCGT GCTCGCCTTCCAGCTCATTCTCCTCACAGTCTATCCTACCGTCATCGCTC CAATCTTCAATAAATACGAACCTCTGGCGGAAGAATCTGAATTAAAACCT CAAATTGACGCCTTGGCATCGCGGGTGAAGTTTCCGTTGACCAAGGTGTT TGTGGTAGATGGATCGCGGAGAAGTGCGCATTCAAACGCGTATTTTTATG GGTTTTTTAAGAATAAGCGGATTGTGCTGTTTGATACGCTGCTGACGCAG GTGCAATCCTCGGAGCTGATTTCGATCCTCGCCCACGAGCTCGGGCACTG GGCGCACAGCCACACCCTCCAAATGTTTTTCGTCAGTCAAGTGCACCTCT TCCTGGCCTTCTTCCTCTTCTCCTCTTCTCTGGACAACGCCGACCTATTC CATTCGTTTGGCTTCGCGACTCGCCCCACGATCATTGCTCTATTCCTCTT TTTTCAAGCGATTTGGTCCCCGGTTGACAAGGCGTTGAGCTTTGGCTTCA CGTTGTGGACCCGCAAAAACGAGTTCCAGGCAGACGAATACGCAGTCGAT CTGGGTTACGCCGAGGACTTACAGCGAGGGCTGGTCAAGCTGCAGGTTGA GAATCTTTCCAACCCCTCCCCTGATCGATGGTATAGCTTCTACCATTACT CCCACCCGCCTCTGACGGAGCGATTGGCAGCAATATGTGCGCGGCAAGAG GGGAGGGAGAAGAAGAGGGGGTGAATGCCCCCAAATGATGCCTGGGCGAT CATCCGCAATTTCGGATCGGAACTTTCTTTCCCCACCTACAAGCAACAAG GGACTGGCATGGCGGACGTGCCATACCTGGAGTTGATAGTCCTCTTCTCC TTCATCGTCTTTGTCTTTGAGTTCTACCTGGACCTGCGGCAGTACGGGGC CTTGCAACGCAAGGACGTGCCTGAAGCCTTGACGACACGCATCAGCGAGC TCGATCAGGCAGCCGCGTCGAAGAATGGAGGAGACTCGAAGGACAAGGAT GGCACCACGACCCTGCTCGCTCGTTTGACCTCGAAATTTGAAGCTGCAAG AAAATATTCTATTGATAAGGCGCATCTTGGGTTTGTTGAAACTCTCTTCT CCCAAATGGAAGCGACGGCGATGCTCTTGCTTGGAAGTATGCCTTGGGTA TGGGACATGTCGGTCAACTTAGCCGGGAAATGGTTTGGGAAAGCAGAAGA CGAGTATATCATCTCTCTCGTCTTCCTAGGTATCAACATGGTGATTGAGA ATATCATCCACCTACCCTTCTCCCTTTGGTCCGTCTTTGTGGTCGAGCAA CGGCATGGTTTCAACAAGCAGTCCCTCAAGGACTTCCTCCTTGATAAAGT CAAGGCCGTCGCCCTCTCGGCCCTCCTCGGCAGCCCTATGACCGTCGCTG TCCTCTATGTCATCAAAGCCGGCGGTCGAAACTTTTTCCTCTACCTCTAC CTTCTCGTGCTCGCCTTCCAGCTCATTCTCCTCACAGTCTATCCTACCGT CATCGCTCCAATCTTCAATAAATACGAACCTCTGGCGGAAGAATCTGAAT TAAAACCTCAAATTGACGCCTTGGCATCGCGGGTGAAGTTTCCGTTGACC AAGGTGTTTGTGGTAGATGGATCGCGGAGAAGTGCGCATTCAAACGCGTA TTTTTATGGGTTTTTTAAGAATAAGCGGATTGTGCTGTTTGATACGCTGC TGACGCAGGTGCAATCCTCGGAGCTGATTTCGATCCTCGCCCACGAGCTC GGGCACTGGGCGCACAGCCACACCCTCCAAATGTTTTTCGTCAGTCAAGT GCACCTCTTCCTGGCCTTCTTCCTCTTCTCCTCTTCTCTGGACAACGCCG ACCTATTCCATTCGTTTGGCTTCGCGACTCGCCCCACGATCATTGCTCTA TTCCTCTTTTTTCAAGCGATTTGGTCCCCGGTTGACAAGGCGTTGAGCTT TGGCTTCACGTTGTGGACCCGCAAAAACGAGTTCCAGGCAGACGAATACG CAGTCGATCTGGGTTACGCCGAGGACTTACAGCGAGGGCTGGTCAAGCTG CAGGTTGAGAATCTTTCCAACCCCTCCCCTGATCGATGGTATAGCTTCTA CCATTACTCCCACCCGCCTCTGACGGAGCGATTGGCAGCAATATGTGCGC GGCAAGAGGGGAGGGAGAAGAAGAGGGGGTGA back to top
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