jgi.p|Nanoce1779_2|582830, gene_3630 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|582830
Unique Namegene_3630
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:814338..816429 +

Link to JBrowse

Properties
Property NameValue
TranscriptId582916
ProteinId582830
Product nameCAAX prenyl protease 1
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:814338..816429 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G02990NO08G02990Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582830mRNA_3630-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|582830mRNA_3630Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|582830

>mRNA_3630-protein ID=mRNA_3630-protein|Name=jgi.p|Nanoce1779_2|582830|organism=Nannochloropsis oceanica|type=polypeptide|length=486bp
MPPNDAWAIIRNFGSELSFPTYKQQGTGMADVPYLELIVLFSFIVFVFEF
YLDLRQYGALQRKDVPEALTTRISELDQAAASKNGGDSKDKDGTTTLLAR
LTSKFEAARKYSIDKAHLGFVETLFSQMEATAMLLLGSMPWVWDMSVNLA
GKWFGKAEDEYIISLVFLGINMVIENIIHLPFSLWSVFVVEQRHGFNKQS
LKDFLLDKVKAVALSALLGSPMTVAVLYVIKAGGRNFFLYLYLLVLAFQL
ILLTVYPTVIAPIFNKYEPLAEESELKPQIDALASRVKFPLTKVFVVDGS
RRSAHSNAYFYGFFKNKRIVLFDTLLTQVQSSELISILAHELGHWAHSHT
LQMFFVSQVHLFLAFFLFSSSLDNADLFHSFGFATRPTIIALFLFFQAIW
SPVDKALSFGFTLWTRKNEFQADEYAVDLGYAEDLQRGLVKLQVENLSNP
SPDRWYSFYHYSHPPLTERLAAICARQEGREKKRG*
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Synonyms
Publications