jgi.p|Nanoce1779_2|552984, mRNA_3558 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|552984
Unique Name	mRNA_3558
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4640
Alignment location	scaffold_6:646047..650686 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	553070
Track	FilteredModels2
ProteinId	552984

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_6	supercontig	scaffold_6:646047..650686 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|552984	gene_3558	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|552984	mRNA_3558-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_3558	CDS_3558	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_6:646047..650686-
coding sequence from alignment at scaffold_6:646047..650686-

mRNA sequence

>mRNA_3558 ID=mRNA_3558|Name=jgi.p|Nanoce1779_2|552984|organism=Nannochloropsis oceanica|type=mRNA|length=4640bp
ATCCGTGAGTAAGCGTCAGTTTTTAATTCATGGTCTCTATTGTCACATTC
TGCTCGATGGTTATCCTCTTCAGACAATCACACAAAAGATACATTGCATG
CCATATGGCAGCGAGAAAACGGCTGCCTAATATTCGATTGCCTTCTCTGT
TTTGGGGTTCAACCCGACACACGCTCGTCGGGCGTCCGAAACGCCATCAG
CCCGCTGTTTTCTTCTAAAAAAACTCTTCACGACACGATACAGCAGCCTA
TGGGCACGGGTTGTCGATAGTTGCTCGCGTACTGCAGGTTGTGTGCGTGT
GTCACCTCGTGGAGCTCCCTACCAAGCTCGTCCGCAAAGCTCAACTGCCG
CATGGAGCGTCGGACCGAACACGCACCCAAGGGAAGTGCATGCGTGGACG
AGTCACCCGTATTGCCTCGATAAGAAGCCTGAACACTGTTGTTACTACTG
CTGTTGGTGTTGGAGCCTCCGTTTAAGGTCGATGCTTGAGGAGGAGGGGG
TTGTTGGTATGCTGAAACTTTCTTCAATATTTTTTTCGGCTGCGGGAGCG
GAAGGGGGGGAGTGACCCGTCCTTCTCGTCTTTGGATTGCTACCGATTGT
GTGCGGCTTGGTGCGTAATATATGTGTGTAACCGCCGCCACAGTGTCATC
CGGCTTCAGGGGGATCCCCCCGTCGCTGTATCTCGTCTTTAATGTGGCTG
GGCCCTTCGCTATCATGTCCTCCTCCTCCTCCTCCTCCTCCTCATTCTCC
TCCTCCTCCTCTTCATCTTCTAGGCCTTTGGGATTAAATTCGGCCTTTGT
TGGAACCCGTACCATCTTGGGTCGCTGGGGTACCGTGTCGTCGTCTAAAA
CTACATGTTTCTCCTTTCTTGCTACAGTCGTATGGGTACCATTGCCTGTG
CTTCCTCTTGATAGGGGATGGGACGTGCTGGCGATTCCATTCCCAGAGCT
CGCAGGCACCACTACTAACCCATCTTGATATGAGGCTCTGCTGCTCCCGT
TCATGGTGACTCGGTGACGCGGACGAGCACTGGTAAGGCGTGATGAGATG
GCCGTTTTGCCTTCGCCTTTTGCCGCACCTCAGGCGTCAGTGAGGGACAG
AAGAGGATCAGGGCAGTACCAGAAGAGGATGCTCCCTTGTCTTAATTGTA
GGGATGTCGGTGGTCGTGTGAGTAATATGGTGGCAAAGAAGAGGGAAGTC
CTTTGCTCAAGCGGAGCCGTAACTCATCACCTATGGGTCCTCTCCGTTTG
CCTTCCTCACGACCTGCGTCCTGTCCATGGGGGCGAGGTATACACAGTGC
AATGTCGGCCTTCATCGGTACACGTTGTGAAAAGCCCCAATCGAGGGTGC
AGTCGAAAGACAATGCAGGGCTGGGCGGCTGGGCTGGCTGGGGCTGGGAG
AAAAGGCCAGACCCGAAAACAATTGCCGCAACGCTTCAAGGAGCAAGGCT
GTCCTCCCTTACGTACACGCTAACAAATGCGACCTTCGAATTTGTACTGT
CCTATCGTTACCTTGCGTGGGTTTTGGGGAGCCATTCCACCCAGGACATC
TTTACTTATCACGTATCTCCGATCTGGCAATCCACCTCCCCATCCTCCTT
CTCTTCTCTATGTATCACAACCCTCCCCTCTCCCCTCCCCCCTTTCACGA
CACAGAAGGATATAGGATATGGAGGTGCTTCTGCTAGGCTCTGGCGGCCG
GGAACACGCCATTGCACTCAAGTTGGCCGAATCCAGCAAGGTCAAGCACG
TGCACGTCGCGCCGGGTAACGGTGGGACAGGGACATCCCATAGCAAGGTC
TCCAATTTGGCCATTGACTCGGTGGACCTGCCCAAGCTCGTGGCATTTGC
CGAGGAGAGCAAGGTGGACCTCGTGGTGGTGGGTCCCGAGGCACCCTTAG
TGATTGGCGCCGTGGACATCTTCTCGGCGGCCGGGTTCCCATGTTTTGGT
CCCACTGCTGGGGCAGCCATGCTCGAGGCATCCAAGGCCTTTTCCAAGGA
TTTTATGGCCCGCCACGACATCCCCACGGCCAAATACGGGAATTTTACGG
ACTACAAAGACGCTGTAGCCTTTGTGGAGGCTGCGGATTTTAACGTGGTA
ATCAAGGCCTCCGGATTGGCGGCCGGCAAGGGCGTGCTCCTCCCCACAAG
TAAGGAGGAGGCGCTCGCGGGCTTGAAGGAAGTGATGCTTGACAAGGCCT
TTGGGGACGCGGGCAACGAGGTAGTCGTTGAGCAATTTTTGGAAGGTGAA
GAAGTCTCTGTCCTCGCATTTTGCGATGGCAAGACGGTGGTACTCATGCC
GGGAGCGCAGGACCACAAGCGGGCGCTGGACGGAGATCAAGGCCTCAACA
CGGGCGGCATGGGAGCCTACGCGCCCGCACCCATTTTGACGCCGGCACTA
CGTGCCAAGGCCCAAGCTATTTTGCAAAAGTCGGTTGACGGTATGGCCGC
GGAGGGCTCACCGTACCAGGGCGTGCTGTACGGGGGATTCATGGTCCCGA
AGGGAGGCATGCCTCTGGTCCTGGAGTACAACTGCCGCTTTGGTGACCCC
GAGACTCAGGTCTTGCTCCCGCTTTTGGAATCTGATCTGTCTGATATCTT
TTTGGCCTGCATTGAGAGGAAGTTACGTCCCGAAATGGTGCGCTGGAAGG
CCATGTCGGCGTCGACGGTGGTAGTGGCCGCCAAGGGCTATCCGGAGGCC
TACTCGAAGGGCATGGTCATTGGAGGTCTGGATGCCGTGCAAGCGTCGGA
TGATGGGAAGGCGGGGTTGGTCACAGTTTACCACGCTGGTACTCAGACGA
ATGTCCAGGGCCAGGTGCTGGCGAATGGCGGGCGTGTCTTGGCCGTAACC
GGGCTAGGGAAGGATATTCCTGACTCGTTGGCTACGGCGTACGCGGGCGT
GAAGCTCATTCAGATGGACCCTTGCCATTACCGCAGCGACATTGCTCAGA
AAGCTTTGCGTGGGCCGTCACCGTTGCGGATCGGGGTGCTAGGCTCGACA
CGGGGCTCGGCTTTACAGATGGTCTTGGATGCCATGGAGGCCGACGAGCT
CATTGGGGCGCGTGTGGTCCGGGTTGTGTCGAACAAGGCAGACGCCGGTA
TCTTGAATCGGGCACGACGGTACGGCATCCCTGCCACGAGTATCTTGGCT
AAAGGCAAGACCCGCGAGGACTTTGACGCGGAGGCCACGCAGCTTTTGGA
GGACGCGGGTGTCGAGCTAGTGCTTCTGATAGGGTACATGCGCATCTTGT
CAGCCGCCTTCTGCCGACGATGGAAAGATCGCTGCTTGAATGTGCACCCC
TCCCTGTTGCCTGACTTTGCGGGTGGCATGGATTTGGATGTCCATGCTGC
AGTTATTGCGGCAGGCAGGACAGAGAGCGGCTGTACGGTTCATTTTGTGA
CAGAGGAGGTGGATGCGGGCCCCATTGTTGTACAGGAACACACCGCGGTG
ATGGAGGGAGAGACGCCGGAGAGTCTCAAGGCCAAGGTACAGCCGTTGGA
AGGGGTGGCATTTGTGAAGGCCATTCAAAAATTCATTGCCGGGGACGTGG
GGCCGATGAAGAAGTCGTCGTAAGAGGAATAAGAGGATCGAAGGAGGGGC
TTTGTGGAGGGACGTCCCCAGGAGGTGATAAGATAGGCTAGATCTATTGA
TTCACGTGTCGGTGTTGATTACTTTATGGTTTGTGGATGAATAGGACAAG
CTGTCTGGTGGGAGACTGGCTCATGGGTTTTGCTGCTTCCCTCCTGCTTT
CTTACTTATCCGTAGGAACCCCCCGCGGCACATGGGGAAAATAAAAAGCA
ACAGCAATTTCAACATAACAAAGATTACTATGTTAATCTCCAAATATTCC
AAATTCATCATTCTCGTCAAATTTTTCTGCTCATATACTTAATGTGGCCC
CATCACAACCTCCATGACGCCCGAAAAAATGGCAAATCCCGCGCATCCCA
GACACGCCGCCTGGGGACCTTGCTTGGCCGAGAGCGCAGCCCCAACCCCA
CAGCCAGAGATAACCGCATTATATGCATCGTGCTTGCCACGGAACTTTTC
CACAACACAGTCCACACCCGAAAACAAGGCGGTGAGGGCCATGAAATTGC
GGGCCCAATGCCCGCAGCGCTCGAAGGTGGCGCGATAGGCCAGGCGCATC
TGCTCCCCCGCAGGTGCCTGCGGGGCCTCTCGGCCATTGATAATGGGGAT
AGCGGGTGACATGTCTCCCATAGCACCCAGAAAAATGCCCATCATCACGC
CCAGTCCCGCACCTGCAATTGCGCCAAACACACTTCGGCCAACACAATTT
TCCTGGGGATTGGGCGGTGCCACTGCCACCGTTCCCGCGGGTGTCTGTGG
CAACGAGACGTACTTATAGAAGGGCAGAGGAAAGGGTGGTGGGTTGGTGA
ATAGGACGTCCCGCTTGATGGGACCGTGGACGGGTGGGGTGGGGTTGTCG
GTGCTGGTGCTGGGTGGGGGAGATGCCATCCAGGTAGATGCGCTGTGGTA
TTATGATGGTGTTGGGCAGGAAAATAAGGACAATGCGAATGGGGCATCAT
GCTATGGCGGCCATGGCACATCCGGTTCGTGTGGGTTGCGTGTGACTGTC
CGGTGGCCCGTGGACAGGGGTCATAAGAGCCATCTTTTGG

protein sequence of jgi.p|Nanoce1779_2|552984

>mRNA_3558-protein ID=mRNA_3558-protein|Name=jgi.p|Nanoce1779_2|552984|organism=Nannochloropsis oceanica|type=polypeptide|length=635bp
MEVLLLGSGGREHAIALKLAESSKVKHVHVAPGNGGTGTSHSKVSNLAID
SVDLPKLVAFAEESKVDLVVVGPEAPLVIGAVDIFSAAGFPCFGPTAGAA
MLEASKAFSKDFMARHDIPTAKYGNFTDYKDAVAFVEAADFNVVIKASGL
AAGKGVLLPTSKEEALAGLKEVMLDKAFGDAGNEVVVEQFLEGEEVSVLA
FCDGKTVVLMPGAQDHKRALDGDQGLNTGGMGAYAPAPILTPALRAKAQA
ILQKSVDGMAAEGSPYQGVLYGGFMVPKGGMPLVLEYNCRFGDPETQVLL
PLLESDLSDIFLACIERKLRPEMVRWKAMSASTVVVAAKGYPEAYSKGMV
IGGLDAVQASDDGKAGLVTVYHAGTQTNVQGQVLANGGRVLAVTGLGKDI
PDSLATAYAGVKLIQMDPCHYRSDIAQKALRGPSPLRIGVLGSTRGSALQ
MVLDAMEADELIGARVVRVVSNKADAGILNRARRYGIPATSILAKGKTRE
DFDAEATQLLEDAGVELVLLIGYMRILSAAFCRRWKDRCLNVHPSLLPDF
AGGMDLDVHAAVIAAGRTESGCTVHFVTEEVDAGPIVVQEHTAVMEGETP
ESLKAKVQPLEGVAFVKAIQKFIAGDVGPMKKSS*

mRNA from alignment at scaffold_6:646047..650686-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_3558 ID=mRNA_3558|Name=jgi.p|Nanoce1779_2|552984|organism=Nannochloropsis oceanica|type=mRNA|length=4640bp|location=Sequence derived from alignment at scaffold_6:646047..650686- (Nannochloropsis oceanica)
ATCCGTGAGTAAGCGTCAGTTTTTAATTCATGGTCTCTATTGTCACATTC
TGCTCGATGGTTATCCTCTTCAGACAATCACACAAAAGATACATTGCATG
CCATATGGCAGCGAGAAAACGGCTGCCTAATATTCGATTGCCTTCTCTGT
TTTGGGGTTCAACCCGACACACGCTCGTCGGGCGTCCGAAACGCCATCAG
CCCGCTGTTTTCTTCTAAAAAAACTCTTCACGACACGATACAGCAGCCTA
TGGGCACGGGTTGTCGATAGTTGCTCGCGTACTGCAGGTTGTGTGCGTGT
GTCACCTCGTGGAGCTCCCTACCAAGCTCGTCCGCAAAGCTCAACTGCCG
CATGGAGCGTCGGACCGAACACGCACCCAAGGGAAGTGCATGCGTGGACG
AGTCACCCGTATTGCCTCGATAAGAAGCCTGAACACTGTTGTTACTACTG
CTGTTGGTGTTGGAGCCTCCGTTTAAGGTCGATGCTTGAGGAGGAGGGGG
TTGTTGGTATGCTGAAACTTTCTTCAATATTTTTTTCGGCTGCGGGAGCG
GAAGGGGGGGAGTGACCCGTCCTTCTCGTCTTTGGATTGCTACCGATTGT
GTGCGGCTTGGTGCGTAATATATGTGTGTAACCGCCGCCACAGTGTCATC
CGGCTTCAGGGGGATCCCCCCGTCGCTGTATCTCGTCTTTAATGTGGCTG
GGCCCTTCGCTATCATGTCCTCCTCCTCCTCCTCCTCCTCCTCATTCTCC
TCCTCCTCCTCTTCATCTTCTAGGCCTTTGGGATTAAATTCGGCCTTTGT
TGGAACCCGTACCATCTTGGGTCGCTGGGGTACCGTGTCGTCGTCTAAAA
CTACATGTTTCTCCTTTCTTGCTACAGTCGTATGGGTACCATTGCCTGTG
CTTCCTCTTGATAGGGGATGGGACGTGCTGGCGATTCCATTCCCAGAGCT
CGCAGGCACCACTACTAACCCATCTTGATATGAGGCTCTGCTGCTCCCGT
TCATGGTGACTCGGTGACGCGGACGAGCACTGGTAAGGCGTGATGAGATG
GCCGTTTTGCCTTCGCCTTTTGCCGCACCTCAGGCGTCAGTGAGGGACAG
AAGAGGATCAGGGCAGTACCAGAAGAGGATGCTCCCTTGTCTTAATTGTA
GGGATGTCGGTGGTCGTGTGAGTAATATGGTGGCAAAGAAGAGGGAAGTC
CTTTGCTCAAGCGGAGCCGTAACTCATCACCTATGGGTCCTCTCCGTTTG
CCTTCCTCACGACCTGCGTCCTGTCCATGGGGGCGAGGTATACACAGTGC
AATGTCGGCCTTCATCGGTACACGTTGTGAAAAGCCCCAATCGAGGGTGC
AGTCGAAAGACAATGCAGGGCTGGGCGGCTGGGCTGGCTGGGGCTGGGAG
AAAAGGCCAGACCCGAAAACAATTGCCGCAACGCTTCAAGGAGCAAGGCT
GTCCTCCCTTACGTACACGCTAACAAATGCGACCTTCGAATTTGTACTGT
CCTATCGTTACCTTGCGTGGGTTTTGGGGAGCCATTCCACCCAGGACATC
TTTACTTATCACGTATCTCCGATCTGGCAATCCACCTCCCCATCCTCCTT
CTCTTCTCTATGTATCACAACCCTCCCCTCTCCCCTCCCCCCTTTCACGA
CACAGAAGGATATAGGATATGGAGGTGCTTCTGCTAGGCTCTGGCGGCCG
GGAACACGCCATTGCACTCAAGTTGGCCGAATCCAGCAAGGTCAAGCACG
TGCACGTCGCGCCGGGTAACGGTGGGACAGGGACATCCCATAGCAAGGTC
TCCAATTTGGCCATTGACTCGGTGGACCTGCCCAAGCTCGTGGCATTTGC
CGAGGAGAGCAAGGTGGACCTCGTGGTGGTGGGTCCCGAGGCACCCTTAG
TGATTGGCGCCGTGGACATCTTCTCGGCGGCCGGGTTCCCATGTTTTGGT
CCCACTGCTGGGGCAGCCATGCTCGAGGCATCCAAGGCCTTTTCCAAGGA
TTTTATGGCCCGCCACGACATCCCCACGGCCAAATACGGGAATTTTACGG
ACTACAAAGACGCTGTAGCCTTTGTGGAGGCTGCGGATTTTAACGTGGTA
ATCAAGGCCTCCGGATTGGCGGCCGGCAAGGGCGTGCTCCTCCCCACAAG
TAAGGAGGAGGCGCTCGCGGGCTTGAAGGAAGTGATGCTTGACAAGGCCT
TTGGGGACGCGGGCAACGAGGTAGTCGTTGAGCAATTTTTGGAAGGTGAA
GAAGTCTCTGTCCTCGCATTTTGCGATGGCAAGACGGTGGTACTCATGCC
GGGAGCGCAGGACCACAAGCGGGCGCTGGACGGAGATCAAGGCCTCAACA
CGGGCGGCATGGGAGCCTACGCGCCCGCACCCATTTTGACGCCGGCACTA
CGTGCCAAGGCCCAAGCTATTTTGCAAAAGTCGGTTGACGGTATGGCCGC
GGAGGGCTCACCGTACCAGGGCGTGCTGTACGGGGGATTCATGGTCCCGA
AGGGAGGCATGCCTCTGGTCCTGGAGTACAACTGCCGCTTTGGTGACCCC
GAGACTCAGGTCTTGCTCCCGCTTTTGGAATCTGATCTGTCTGATATCTT
TTTGGCCTGCATTGAGAGGAAGTTACGTCCCGAAATGGTGCGCTGGAAGG
CCATGTCGGCGTCGACGGTGGTAGTGGCCGCCAAGGGCTATCCGGAGGCC
TACTCGAAGGGCATGGTCATTGGAGGTCTGGATGCCGTGCAAGCGTCGGA
TGATGGGAAGGCGGGGTTGGTCACAGTTTACCACGCTGGTACTCAGACGA
ATGTCCAGGGCCAGGTGCTGGCGAATGGCGGGCGTGTCTTGGCCGTAACC
GGGCTAGGGAAGGATATTCCTGACTCGTTGGCTACGGCGTACGCGGGCGT
GAAGCTCATTCAGATGGACCCTTGCCATTACCGCAGCGACATTGCTCAGA
AAGCTTTGCGTGGGCCGTCACCGTTGCGGATCGGGGTGCTAGGCTCGACA
CGGGGCTCGGCTTTACAGATGGTCTTGGATGCCATGGAGGCCGACGAGCT
CATTGGGGCGCGTGTGGTCCGGGTTGTGTCGAACAAGGCAGACGCCGGTA
TCTTGAATCGGGCACGACGGTACGGCATCCCTGCCACGAGTATCTTGGCT
AAAGGCAAGACCCGCGAGGACTTTGACGCGGAGGCCACGCAGCTTTTGGA
GGACGCGGGTGTCGAGCTAGTGCTTCTGATAGGGTACATGCGCATCTTGT
CAGCCGCCTTCTGCCGACGATGGAAAGATCGCTGCTTGAATGTGCACCCC
TCCCTGTTGCCTGACTTTGCGGGTGGCATGGATTTGGATGTCCATGCTGC
AGTTATTGCGGCAGGCAGGACAGAGAGCGGCTGTACGGTTCATTTTGTGA
CAGAGGAGGTGGATGCGGGCCCCATTGTTGTACAGGAACACACCGCGGTG
ATGGAGGGAGAGACGCCGGAGAGTCTCAAGGCCAAGGTACAGCCGTTGGA
AGGGGTGGCATTTGTGAAGGCCATTCAAAAATTCATTGCCGGGGACGTGG
GGCCGATGAAGAAGTCGTCGTAAGAGGAATAAGAGGATCGAAGGAGGGGC
TTTGTGGAGGGACGTCCCCAGGAGGTGATAAGATAGGCTAGATCTATTGA
TTCACGTGTCGGTGTTGATTACTTTATGGTTTGTGGATGAATAGGACAAG
CTGTCTGGTGGGAGACTGGCTCATGGGTTTTGCTGCTTCCCTCCTGCTTT
CTTACTTATCCGTAGGAACCCCCCGCGGCACATGGGGAAAATAAAAAGCA
ACAGCAATTTCAACATAACAAAGATTACTATGTTAATCTCCAAATATTCC
AAATTCATCATTCTCGTCAAATTTTTCTGCTCATATACTTAATGTGGCCC
CATCACAACCTCCATGACGCCCGAAAAAATGGCAAATCCCGCGCATCCCA
GACACGCCGCCTGGGGACCTTGCTTGGCCGAGAGCGCAGCCCCAACCCCA
CAGCCAGAGATAACCGCATTATATGCATCGTGCTTGCCACGGAACTTTTC
CACAACACAGTCCACACCCGAAAACAAGGCGGTGAGGGCCATGAAATTGC
GGGCCCAATGCCCGCAGCGCTCGAAGGTGGCGCGATAGGCCAGGCGCATC
TGCTCCCCCGCAGGTGCCTGCGGGGCCTCTCGGCCATTGATAATGGGGAT
AGCGGGTGACATGTCTCCCATAGCACCCAGAAAAATGCCCATCATCACGC
CCAGTCCCGCACCTGCAATTGCGCCAAACACACTTCGGCCAACACAATTT
TCCTGGGGATTGGGCGGTGCCACTGCCACCGTTCCCGCGGGTGTCTGTGG
CAACGAGACGTACTTATAGAAGGGCAGAGGAAAGGGTGGTGGGTTGGTGA
ATAGGACGTCCCGCTTGATGGGACCGTGGACGGGTGGGGTGGGGTTGTCG
GTGCTGGTGCTGGGTGGGGGAGATGCCATCCAGGTAGATGCGCTGTGGTA
TTATGATGGTGTTGGGCAGGAAAATAAGGACAATGCGAATGGGGCATCAT
GCTATGGCGGCCATGGCACATCCGGTTCGTGTGGGTTGCGTGTGACTGTC
CGGTGGCCCGTGGACAGGGGTCATAAGAGCCATCTTTTGG

Coding sequence (CDS) from alignment at scaffold_6:646047..650686-

>mRNA_3558 ID=mRNA_3558|Name=jgi.p|Nanoce1779_2|552984|organism=Nannochloropsis oceanica|type=CDS|length=1905bp|location=Sequence derived from alignment at scaffold_6:646047..650686- (Nannochloropsis oceanica)
ATGGAGGTGCTTCTGCTAGGCTCTGGCGGCCGGGAACACGCCATTGCACT
CAAGTTGGCCGAATCCAGCAAGGTCAAGCACGTGCACGTCGCGCCGGGTA
ACGGTGGGACAGGGACATCCCATAGCAAGGTCTCCAATTTGGCCATTGAC
TCGGTGGACCTGCCCAAGCTCGTGGCATTTGCCGAGGAGAGCAAGGTGGA
CCTCGTGGTGGTGGGTCCCGAGGCACCCTTAGTGATTGGCGCCGTGGACA
TCTTCTCGGCGGCCGGGTTCCCATGTTTTGGTCCCACTGCTGGGGCAGCC
ATGCTCGAGGCATCCAAGGCCTTTTCCAAGGATTTTATGGCCCGCCACGA
CATCCCCACGGCCAAATACGGGAATTTTACGGACTACAAAGACGCTGTAG
CCTTTGTGGAGGCTGCGGATTTTAACGTGGTAATCAAGGCCTCCGGATTG
GCGGCCGGCAAGGGCGTGCTCCTCCCCACAAGTAAGGAGGAGGCGCTCGC
GGGCTTGAAGGAAGTGATGCTTGACAAGGCCTTTGGGGACGCGGGCAACG
AGGTAGTCGTTGAGCAATTTTTGGAAGGTGAAGAAGTCTCTGTCCTCGCA
TTTTGCGATGGCAAGACGGTGGTACTCATGCCGGGAGCGCAGGACCACAA
GCGGGCGCTGGACGGAGATCAAGGCCTCAACACGGGCGGCATGGGAGCCT
ACGCGCCCGCACCCATTTTGACGCCGGCACTACGTGCCAAGGCCCAAGCT
ATTTTGCAAAAGTCGGTTGACGGTATGGCCGCGGAGGGCTCACCGTACCA
GGGCGTGCTGTACGGGGGATTCATGGTCCCGAAGGGAGGCATGCCTCTGG
TCCTGGAGTACAACTGCCGCTTTGGTGACCCCGAGACTCAGGTCTTGCTC
CCGCTTTTGGAATCTGATCTGTCTGATATCTTTTTGGCCTGCATTGAGAG
GAAGTTACGTCCCGAAATGGTGCGCTGGAAGGCCATGTCGGCGTCGACGG
TGGTAGTGGCCGCCAAGGGCTATCCGGAGGCCTACTCGAAGGGCATGGTC
ATTGGAGGTCTGGATGCCGTGCAAGCGTCGGATGATGGGAAGGCGGGGTT
GGTCACAGTTTACCACGCTGGTACTCAGACGAATGTCCAGGGCCAGGTGC
TGGCGAATGGCGGGCGTGTCTTGGCCGTAACCGGGCTAGGGAAGGATATT
CCTGACTCGTTGGCTACGGCGTACGCGGGCGTGAAGCTCATTCAGATGGA
CCCTTGCCATTACCGCAGCGACATTGCTCAGAAAGCTTTGCGTGGGCCGT
CACCGTTGCGGATCGGGGTGCTAGGCTCGACACGGGGCTCGGCTTTACAG
ATGGTCTTGGATGCCATGGAGGCCGACGAGCTCATTGGGGCGCGTGTGGT
CCGGGTTGTGTCGAACAAGGCAGACGCCGGTATCTTGAATCGGGCACGAC
GGTACGGCATCCCTGCCACGAGTATCTTGGCTAAAGGCAAGACCCGCGAG
GACTTTGACGCGGAGGCCACGCAGCTTTTGGAGGACGCGGGTGTCGAGCT
AGTGCTTCTGATAGGGTACATGCGCATCTTGTCAGCCGCCTTCTGCCGAC
GATGGAAAGATCGCTGCTTGAATGTGCACCCCTCCCTGTTGCCTGACTTT
GCGGGTGGCATGGATTTGGATGTCCATGCTGCAGTTATTGCGGCAGGCAG
GACAGAGAGCGGCTGTACGGTTCATTTTGTGACAGAGGAGGTGGATGCGG
GCCCCATTGTTGTACAGGAACACACCGCGGTGATGGAGGGAGAGACGCCG
GAGAGTCTCAAGGCCAAGGTACAGCCGTTGGAAGGGGTGGCATTTGTGAA
GGCCATTCAAAAATTCATTGCCGGGGACGTGGGGCCGATGAAGAAGTCGT
CGTAA

Synonyms

Publications