jgi.p|Nanoce1779_2|552984, gene_3558 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|552984
Unique Namegene_3558
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:646047..650686 -

Link to JBrowse

Properties
Property NameValue
TranscriptId553070
ProteinId552984
Product namePhosphoribosylglycinamide synthetase, ATP-grasp (A) domain-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:646047..650686 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0005524ATP binding
GO:0004644phosphoribosylglycinamide formyltransferase activity
GO:0016742hydroxymethyl-, formyl- and related transferase activity
GO:0008168methyltransferase activity
GO:0004637phosphoribosylamine-glycine ligase activity
Vocabulary: Biological Process
TermDefinition
GO:0006189'de novo' IMP biosynthetic process
GO:0009058biosynthetic process
GO:0009113purine nucleobase biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G02280NO08G02280Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|552984mRNA_3558-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|552984mRNA_3558Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|552984

>mRNA_3558-protein ID=mRNA_3558-protein|Name=jgi.p|Nanoce1779_2|552984|organism=Nannochloropsis oceanica|type=polypeptide|length=635bp
MEVLLLGSGGREHAIALKLAESSKVKHVHVAPGNGGTGTSHSKVSNLAID
SVDLPKLVAFAEESKVDLVVVGPEAPLVIGAVDIFSAAGFPCFGPTAGAA
MLEASKAFSKDFMARHDIPTAKYGNFTDYKDAVAFVEAADFNVVIKASGL
AAGKGVLLPTSKEEALAGLKEVMLDKAFGDAGNEVVVEQFLEGEEVSVLA
FCDGKTVVLMPGAQDHKRALDGDQGLNTGGMGAYAPAPILTPALRAKAQA
ILQKSVDGMAAEGSPYQGVLYGGFMVPKGGMPLVLEYNCRFGDPETQVLL
PLLESDLSDIFLACIERKLRPEMVRWKAMSASTVVVAAKGYPEAYSKGMV
IGGLDAVQASDDGKAGLVTVYHAGTQTNVQGQVLANGGRVLAVTGLGKDI
PDSLATAYAGVKLIQMDPCHYRSDIAQKALRGPSPLRIGVLGSTRGSALQ
MVLDAMEADELIGARVVRVVSNKADAGILNRARRYGIPATSILAKGKTRE
DFDAEATQLLEDAGVELVLLIGYMRILSAAFCRRWKDRCLNVHPSLLPDF
AGGMDLDVHAAVIAAGRTESGCTVHFVTEEVDAGPIVVQEHTAVMEGETP
ESLKAKVQPLEGVAFVKAIQKFIAGDVGPMKKSS*
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Synonyms
Publications