jgi.p|Nanoce1779_2|669442, mRNA_3476 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|669442
Unique Name	mRNA_3476
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4338
Alignment location	scaffold_6:446943..451280 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	669528
Track	FilteredModels2
ProteinId	669442

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_6	supercontig	scaffold_6:446943..451280 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|669442	gene_3476	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|669442	mRNA_3476-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_3476	CDS_3476	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_6:446943..451280-
coding sequence from alignment at scaffold_6:446943..451280-

mRNA sequence

>mRNA_3476 ID=mRNA_3476|Name=jgi.p|Nanoce1779_2|669442|organism=Nannochloropsis oceanica|type=mRNA|length=4338bp
CAGAACAACAGGACCCAACGACCCCCCATCTCCTCTTCGCCAAATAGGCC
TGCTTCCTGCTTCTACGCACGGGGCACGACTGAAGCGATCATGAGCCACA
ATTCGTCGACGTCATCCCCCTCCGTGCAGCCGGTAGCACCTTCATCAGAC
TCGATGCCTGCTGCTTCAATGCCGCCCTTGTCCCCTGGCGCCTTCTCCAC
ATCTTCGTTTTCAACCATCCCCTCCGCCTTCTCCTCCCCTGCACGCCACC
GCGACGGGGTAAGCAGTAGCAATAGCAGTGTGGCCAGCGGCATAACTTCT
GCCGCTTACGCAGCAGCTTCCGTCGGCGGCACCACTGCCAGGACGTCGTC
CAATTTGTCCACTGTCCACGCCTACAGTCAGCAACAACCGCGGCAGCAGC
AAGCAACCTCCGCCTCCTCGGCGCCGACGAATAACAGTTCCTACAGCACC
AACTATACGACACCCGTGCCTTCCCGGGCGTCCCATCAGCCCCGTGCCTT
GACCACGCCTGTTCATAGCAACGGTACAATCCCCAGCAACGCCCGTTTTC
GTGCTGGCACTCTTGATACGTCCTTGTCTTCTAACGCTTACACCTCCTCC
CGCACGCACGCGGCATCACCAATGCGTTCCGGAGCAGCGAGCGGTGCCAG
CAACAACGGAGTAAAAGGAGCTGGAGGATTATATATTTCTCCGTCTTTAA
CACCAGCACGAACGCCGGAAGATGAGAGTGTGTTGTTGCATGTCCAATAT
GGCACACGAGTCGTCTTTCGAGGAACCAAAGGTGTGACTCTCTCCGCCAG
ACCCGTGACTGACAGCACCAACACCAGCAGCAACGGTACGCCTTCCATAC
CTGGCGGAGGGCCGACAACGCCTGGCGGGGGCATCACGAGCGCCAGTAGC
AGCAGCAGCAGCAGAAGCAGCAGCAACGCGGCGGTGTCATTTCGTGCCTG
CACAGACGGACGAGGACTGGGCGAGGCAAGGGAGACTTTACTGTTGGTCA
ATTGCCTCAGGAGGGATGATCGGGGGCCGATAGCGTATGGGGCTACTGTG
GCGGTGCGGTGTGGTTGGGCAAAGGAAAGGTTTTTGGGAATACACAGCAC
GACTGGGGAGGTGGGGTTTTGGAGGACTCTGATTGGAGCAGCGGAGAAAT
GGGTGTTGCTGCGCCCGAATGAAATCAAGTCTTTGAGGAGTGATGTTGTT
GGTAGGGCTGGGAGCAGTAGTAGCACTCCCTCTACCCGGGGACATGCGCA
TGCTTTGCCGCTGTCTGGTATGGGGCCGGGAGGGAGAACGGGAGATGCGG
GGGGGTGGGTGCTGGCTGGGGACGCCATTGTCCTCCAAGCGGTGTCCACC
AGGGAAGTGGTGATGGCCAGGGAGGCTCCCGAGGATGGAATGGAGGTCAT
GTTGTGCCCGCCTGAGTCGGCGTTACTTTCGAATGCGTCTTGGTCGGTGG
GGTGGACGGGGACTCCCTTATACCCTGCTTGGAATATGACCAGGCCTTAC
CTAACTGGTGATTTCGTCACGCACCCTCGTCGGCATCATCTTTCGACGGC
ACAAGAAAACCTTTTTTCGATCCTGCCACATGCCGCAAATAGGGATGAGG
AACGGCTGGCTCCCAGGCCGTTGAGTGAATTTTCCTCGGGGGAGCAAGAG
GATTTGCTGGTCGAGGACTTGTTGTGGGTGGTTTCTGGGTACGAAGGGAA
GTACATCAAGGCGTTCTTGCCCTCGTCCTTATCCTCCCTTCCCTCATCGT
CCTCATCTTTGGATGCGGCAGAAGGTGTGCGATTTAAATTGACGGAGGGA
GGGAGGGAGGGAGTGGAGGGGAGCCTGGTGGGGATGGTGGAGAAGTTTCT
GCCGTTGGGGGGGCATTGCTTGAGGCTACGCAGGTTCGTGGATAAGAAGA
GGAGGTATGACTATGGGATGGTAGCCCAAGCGCTTGCTGCAGGGCTGCAT
GATCTGCTGTTGAAGAGTTACGCCTTGTTGTTAGCGCAGTTGGAGCATAA
GCACCGAGGGGCAGGGAGGGAGGGAGGAAGGGGTCTGACGTTGCAGCAAT
TATGGTTTCATTTGCAGCCGGCGTTGTGGGGTTTGGAAGGGTTGGGTGCC
CTGTGTGCGAGGGTCAGGAATAAAAAAGGCGGGCAGTTGTTGAATGAGCT
GAGGGCGGCGGTGGCGGGGAGTGGGGATGAGAAGAGCGCGCAGACTCATT
CTTTTTTACTCGAAAAGGCAGCGGGGCCGTACATGGTCATGTTGGAAGGG
TGGATCTATCGCGGGGTGCTCGAGGATCCTTATTGCGAGTTTATGATTCG
GGAGGAACAAGGCTTAGAGAAAGAGAATGTTCAGGAGGACTTTAATGCAG
CGTATTGGGATGCGAGGAGCACGATCAGGCCAGAGCATGTGTTTGGGGAG
TTGGAGGAGTTCAGGCCCAAGATTTTGACCACGGGGAAGTATCTGAATGT
GATACGGGAGTGTGGGCTTGATCCGGGTGTGGCTGAGCTTGGTGAAGGCA
GGGATGGGGCGTTGAGCGTAAGGGAGACAGGGAGAGGGGGTGAAAGGATG
CCAAAATTGAGGTTTTCAGCAGGAAAGGCGGCTGTGGGGGAAGCGATTGA
TGTGGCGTATCGCCGCGCCTGCCGCTTGTTGTTGGACGTGGTGTTGCGAC
AGCATCGTCTATTGCCACGATTGGCTTCGATTAAGCATTATTTTCTGCTG
GACAAGGGGGATTTTTTCGTTCACTTTATGAATACTGCGGAGAAGGAGCT
GTTGAAAAGCGTGACCGACGTTTCCCCCTCCCGACTGGAGGGCCTCTTGC
ATCTTTCGATACAGATGTCCGTGGCGAGCAACGACCCGTACAAAGACGAT
GTGAGCAGCTCCTTCTCGAATAAAACGCTGATTGAGCACTTGAATGCGAT
TCATAAATCGGACCGCTTCGGCGGTGCTGCTGGTGGGGGAGGGGGAGGGG
GGGAGGGGTTGAACGTCCATATCTCTCCGGCCACTGCTGCTGCTGCTGCT
GCCTCCAACTCGATACATATACCTTCTCTCCAAGAAGCAGACTTGCCCGA
GTTACCAAACCTCTTACTCCAACTTGACCTCTCCCCCTCCTCCTTCGATA
TCAGCAGCAACACTTCTTCCCTCTATCCCTCCTCCTCCTCCACCACCACC
ACCTCCGGAATCAAGGCCTATGAAGCCTTCATGCTAGAGACCCAAGTCAA
ATGGCCCCTCTCCCTCGTAGTCTCTCGTCGGGCCGTCACGAAATACCAGC
TCCTCTTTCGACACCTCTTCCTAGCCAAGTTCGTCGAGCGGCGCCTGCAC
ACTTCCTGGGCCGAGCAACAGAGCTACAAGGAGCTCGACGTGAGGCAGGC
TTTGGGTCTCGCATTTTGTGTAAGGCATAAGATGCAACATTTTCTTGCGA
CGTACATTTATTACATGATGTTCGAGGTGGTAGAACCACATTGGCATGTG
TTGCAGGCGTGCCTGAGGACGGGGGAGGGGGTCGAACATCTGGATGATGT
GATTCGCTTACACCAGGAGTTTCAGGATTCCTGCTTGAAAGAATGTTTAT
TGACGGATCAGTCTATCTTGAAGGTGCTGAATAAGATTTTGGTGGTTTGT
CTGTTGTTTGCTGCTTACATGGAACAAACAACGCGGGACATGGCTGAGGT
GGCGGCATCGGTCTCGGAAGAAAGCGGCAGCTACAGCACGAATTTAGAGG
GAGAAGTTGACGTAGATGGAAGTGGAGTTATTTCGTTCATTCCGGCGACG
AATGGTAGAGTAGGCAATCGGGGAGGGGGAGGGAGGAAGACACCGCAACA
TATTGATAATGGAGCGGTGCGTCGAGGGCGAGTAGCGAGGCAGACGGCCG
AGGTGCGGGCACGGGCTGTTGCGAGTGGGTTTGGGCCGACAATGGATGCG
TTTGCCAAGAATTTGGACTTTCACACGGAGGAGTTTATGAGGAGATTGTG
GGAGGATTCGCGTGCGCAGTACCAATCCAGCCATTTGTCTAACTTATTGG
CTCGATTGGATTACAATGGTTTTTTTGCCGCTCAATTTGCTCGACCGACT
TTGTCCTCATCGCCGGGGAGGCAGCAACAGCAACAGCAGCAGCAGCCTGT
TTCGTGAGGATAGGAATAAGAGTGAAGGGTAAAGAGGAACAGAGGGAGGG
GAGGGGCCTTGACTGCAAACGGGATAATCGTAGATTGACCTGTGAGGAAT
GTATGTGTGTCTGTACAACAAGCAACAGATGAAAGGGGCGTCAAGAATAG
AAATGGCGTAACCTCAAATGAAGGCAAGCACGTCAAAGAAAATTTCTTCG
TCATACAGTCTGAAGTACAGGCGTGTATGTGACTAACT

protein sequence of jgi.p|Nanoce1779_2|669442

>mRNA_3476-protein ID=mRNA_3476-protein|Name=jgi.p|Nanoce1779_2|669442|organism=Nannochloropsis oceanica|type=polypeptide|length=1339bp
MSHNSSTSSPSVQPVAPSSDSMPAASMPPLSPGAFSTSSFSTIPSAFSSP
ARHRDGVSSSNSSVASGITSAAYAAASVGGTTARTSSNLSTVHAYSQQQP
RQQQATSASSAPTNNSSYSTNYTTPVPSRASHQPRALTTPVHSNGTIPSN
ARFRAGTLDTSLSSNAYTSSRTHAASPMRSGAASGASNNGVKGAGGLYIS
PSLTPARTPEDESVLLHVQYGTRVVFRGTKGVTLSARPVTDSTNTSSNGT
PSIPGGGPTTPGGGITSASSSSSSRSSSNAAVSFRACTDGRGLGEARETL
LLVNCLRRDDRGPIAYGATVAVRCGWAKERFLGIHSTTGEVGFWRTLIGA
AEKWVLLRPNEIKSLRSDVVGRAGSSSSTPSTRGHAHALPLSGMGPGGRT
GDAGGWVLAGDAIVLQAVSTREVVMAREAPEDGMEVMLCPPESALLSNAS
WSVGWTGTPLYPAWNMTRPYLTGDFVTHPRRHHLSTAQENLFSILPHAAN
RDEERLAPRPLSEFSSGEQEDLLVEDLLWVVSGYEGKYIKAFLPSSLSSL
PSSSSSLDAAEGVRFKLTEGGREGVEGSLVGMVEKFLPLGGHCLRLRRFV
DKKRRYDYGMVAQALAAGLHDLLLKSYALLLAQLEHKHRGAGREGGRGLT
LQQLWFHLQPALWGLEGLGALCARVRNKKGGQLLNELRAAVAGSGDEKSA
QTHSFLLEKAAGPYMVMLEGWIYRGVLEDPYCEFMIREEQGLEKENVQED
FNAAYWDARSTIRPEHVFGELEEFRPKILTTGKYLNVIRECGLDPGVAEL
GEGRDGALSVRETGRGGERMPKLRFSAGKAAVGEAIDVAYRRACRLLLDV
VLRQHRLLPRLASIKHYFLLDKGDFFVHFMNTAEKELLKSVTDVSPSRLE
GLLHLSIQMSVASNDPYKDDVSSSFSNKTLIEHLNAIHKSDRFGGAAGGG
GGGGEGLNVHISPATAAAAAASNSIHIPSLQEADLPELPNLLLQLDLSPS
SFDISSNTSSLYPSSSSTTTTSGIKAYEAFMLETQVKWPLSLVVSRRAVT
KYQLLFRHLFLAKFVERRLHTSWAEQQSYKELDVRQALGLAFCVRHKMQH
FLATYIYYMMFEVVEPHWHVLQACLRTGEGVEHLDDVIRLHQEFQDSCLK
ECLLTDQSILKVLNKILVVCLLFAAYMEQTTRDMAEVAASVSEESGSYST
NLEGEVDVDGSGVISFIPATNGRVGNRGGGGRKTPQHIDNGAVRRGRVAR
QTAEVRARAVASGFGPTMDAFAKNLDFHTEEFMRRLWEDSRAQYQSSHLS
NLLARLDYNGFFAAQFARPTLSSSPGRQQQQQQQQPVS*

mRNA from alignment at scaffold_6:446943..451280-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_3476 ID=mRNA_3476|Name=jgi.p|Nanoce1779_2|669442|organism=Nannochloropsis oceanica|type=mRNA|length=4338bp|location=Sequence derived from alignment at scaffold_6:446943..451280- (Nannochloropsis oceanica)
CAGAACAACAGGACCCAACGACCCCCCATCTCCTCTTCGCCAAATAGGCC
TGCTTCCTGCTTCTACGCACGGGGCACGACTGAAGCGATCATGAGCCACA
ATTCGTCGACGTCATCCCCCTCCGTGCAGCCGGTAGCACCTTCATCAGAC
TCGATGCCTGCTGCTTCAATGCCGCCCTTGTCCCCTGGCGCCTTCTCCAC
ATCTTCGTTTTCAACCATCCCCTCCGCCTTCTCCTCCCCTGCACGCCACC
GCGACGGGGTAAGCAGTAGCAATAGCAGTGTGGCCAGCGGCATAACTTCT
GCCGCTTACGCAGCAGCTTCCGTCGGCGGCACCACTGCCAGGACGTCGTC
CAATTTGTCCACTGTCCACGCCTACAGTCAGCAACAACCGCGGCAGCAGC
AAGCAACCTCCGCCTCCTCGGCGCCGACGAATAACAGTTCCTACAGCACC
AACTATACGACACCCGTGCCTTCCCGGGCGTCCCATCAGCCCCGTGCCTT
GACCACGCCTGTTCATAGCAACGGTACAATCCCCAGCAACGCCCGTTTTC
GTGCTGGCACTCTTGATACGTCCTTGTCTTCTAACGCTTACACCTCCTCC
CGCACGCACGCGGCATCACCAATGCGTTCCGGAGCAGCGAGCGGTGCCAG
CAACAACGGAGTAAAAGGAGCTGGAGGATTATATATTTCTCCGTCTTTAA
CACCAGCACGAACGCCGGAAGATGAGAGTGTGTTGTTGCATGTCCAATAT
GGCACACGAGTCGTCTTTCGAGGAACCAAAGGTGTGACTCTCTCCGCCAG
ACCCGTGACTGACAGCACCAACACCAGCAGCAACGGTACGCCTTCCATAC
CTGGCGGAGGGCCGACAACGCCTGGCGGGGGCATCACGAGCGCCAGTAGC
AGCAGCAGCAGCAGAAGCAGCAGCAACGCGGCGGTGTCATTTCGTGCCTG
CACAGACGGACGAGGACTGGGCGAGGCAAGGGAGACTTTACTGTTGGTCA
ATTGCCTCAGGAGGGATGATCGGGGGCCGATAGCGTATGGGGCTACTGTG
GCGGTGCGGTGTGGTTGGGCAAAGGAAAGGTTTTTGGGAATACACAGCAC
GACTGGGGAGGTGGGGTTTTGGAGGACTCTGATTGGAGCAGCGGAGAAAT
GGGTGTTGCTGCGCCCGAATGAAATCAAGTCTTTGAGGAGTGATGTTGTT
GGTAGGGCTGGGAGCAGTAGTAGCACTCCCTCTACCCGGGGACATGCGCA
TGCTTTGCCGCTGTCTGGTATGGGGCCGGGAGGGAGAACGGGAGATGCGG
GGGGGTGGGTGCTGGCTGGGGACGCCATTGTCCTCCAAGCGGTGTCCACC
AGGGAAGTGGTGATGGCCAGGGAGGCTCCCGAGGATGGAATGGAGGTCAT
GTTGTGCCCGCCTGAGTCGGCGTTACTTTCGAATGCGTCTTGGTCGGTGG
GGTGGACGGGGACTCCCTTATACCCTGCTTGGAATATGACCAGGCCTTAC
CTAACTGGTGATTTCGTCACGCACCCTCGTCGGCATCATCTTTCGACGGC
ACAAGAAAACCTTTTTTCGATCCTGCCACATGCCGCAAATAGGGATGAGG
AACGGCTGGCTCCCAGGCCGTTGAGTGAATTTTCCTCGGGGGAGCAAGAG
GATTTGCTGGTCGAGGACTTGTTGTGGGTGGTTTCTGGGTACGAAGGGAA
GTACATCAAGGCGTTCTTGCCCTCGTCCTTATCCTCCCTTCCCTCATCGT
CCTCATCTTTGGATGCGGCAGAAGGTGTGCGATTTAAATTGACGGAGGGA
GGGAGGGAGGGAGTGGAGGGGAGCCTGGTGGGGATGGTGGAGAAGTTTCT
GCCGTTGGGGGGGCATTGCTTGAGGCTACGCAGGTTCGTGGATAAGAAGA
GGAGGTATGACTATGGGATGGTAGCCCAAGCGCTTGCTGCAGGGCTGCAT
GATCTGCTGTTGAAGAGTTACGCCTTGTTGTTAGCGCAGTTGGAGCATAA
GCACCGAGGGGCAGGGAGGGAGGGAGGAAGGGGTCTGACGTTGCAGCAAT
TATGGTTTCATTTGCAGCCGGCGTTGTGGGGTTTGGAAGGGTTGGGTGCC
CTGTGTGCGAGGGTCAGGAATAAAAAAGGCGGGCAGTTGTTGAATGAGCT
GAGGGCGGCGGTGGCGGGGAGTGGGGATGAGAAGAGCGCGCAGACTCATT
CTTTTTTACTCGAAAAGGCAGCGGGGCCGTACATGGTCATGTTGGAAGGG
TGGATCTATCGCGGGGTGCTCGAGGATCCTTATTGCGAGTTTATGATTCG
GGAGGAACAAGGCTTAGAGAAAGAGAATGTTCAGGAGGACTTTAATGCAG
CGTATTGGGATGCGAGGAGCACGATCAGGCCAGAGCATGTGTTTGGGGAG
TTGGAGGAGTTCAGGCCCAAGATTTTGACCACGGGGAAGTATCTGAATGT
GATACGGGAGTGTGGGCTTGATCCGGGTGTGGCTGAGCTTGGTGAAGGCA
GGGATGGGGCGTTGAGCGTAAGGGAGACAGGGAGAGGGGGTGAAAGGATG
CCAAAATTGAGGTTTTCAGCAGGAAAGGCGGCTGTGGGGGAAGCGATTGA
TGTGGCGTATCGCCGCGCCTGCCGCTTGTTGTTGGACGTGGTGTTGCGAC
AGCATCGTCTATTGCCACGATTGGCTTCGATTAAGCATTATTTTCTGCTG
GACAAGGGGGATTTTTTCGTTCACTTTATGAATACTGCGGAGAAGGAGCT
GTTGAAAAGCGTGACCGACGTTTCCCCCTCCCGACTGGAGGGCCTCTTGC
ATCTTTCGATACAGATGTCCGTGGCGAGCAACGACCCGTACAAAGACGAT
GTGAGCAGCTCCTTCTCGAATAAAACGCTGATTGAGCACTTGAATGCGAT
TCATAAATCGGACCGCTTCGGCGGTGCTGCTGGTGGGGGAGGGGGAGGGG
GGGAGGGGTTGAACGTCCATATCTCTCCGGCCACTGCTGCTGCTGCTGCT
GCCTCCAACTCGATACATATACCTTCTCTCCAAGAAGCAGACTTGCCCGA
GTTACCAAACCTCTTACTCCAACTTGACCTCTCCCCCTCCTCCTTCGATA
TCAGCAGCAACACTTCTTCCCTCTATCCCTCCTCCTCCTCCACCACCACC
ACCTCCGGAATCAAGGCCTATGAAGCCTTCATGCTAGAGACCCAAGTCAA
ATGGCCCCTCTCCCTCGTAGTCTCTCGTCGGGCCGTCACGAAATACCAGC
TCCTCTTTCGACACCTCTTCCTAGCCAAGTTCGTCGAGCGGCGCCTGCAC
ACTTCCTGGGCCGAGCAACAGAGCTACAAGGAGCTCGACGTGAGGCAGGC
TTTGGGTCTCGCATTTTGTGTAAGGCATAAGATGCAACATTTTCTTGCGA
CGTACATTTATTACATGATGTTCGAGGTGGTAGAACCACATTGGCATGTG
TTGCAGGCGTGCCTGAGGACGGGGGAGGGGGTCGAACATCTGGATGATGT
GATTCGCTTACACCAGGAGTTTCAGGATTCCTGCTTGAAAGAATGTTTAT
TGACGGATCAGTCTATCTTGAAGGTGCTGAATAAGATTTTGGTGGTTTGT
CTGTTGTTTGCTGCTTACATGGAACAAACAACGCGGGACATGGCTGAGGT
GGCGGCATCGGTCTCGGAAGAAAGCGGCAGCTACAGCACGAATTTAGAGG
GAGAAGTTGACGTAGATGGAAGTGGAGTTATTTCGTTCATTCCGGCGACG
AATGGTAGAGTAGGCAATCGGGGAGGGGGAGGGAGGAAGACACCGCAACA
TATTGATAATGGAGCGGTGCGTCGAGGGCGAGTAGCGAGGCAGACGGCCG
AGGTGCGGGCACGGGCTGTTGCGAGTGGGTTTGGGCCGACAATGGATGCG
TTTGCCAAGAATTTGGACTTTCACACGGAGGAGTTTATGAGGAGATTGTG
GGAGGATTCGCGTGCGCAGTACCAATCCAGCCATTTGTCTAACTTATTGG
CTCGATTGGATTACAATGGTTTTTTTGCCGCTCAATTTGCTCGACCGACT
TTGTCCTCATCGCCGGGGAGGCAGCAACAGCAACAGCAGCAGCAGCCTGT
TTCGTGAGGATAGGAATAAGAGTGAAGGGTAAAGAGGAACAGAGGGAGGG
GAGGGGCCTTGACTGCAAACGGGATAATCGTAGATTGACCTGTGAGGAAT
GTATGTGTGTCTGTACAACAAGCAACAGATGAAAGGGGCGTCAAGAATAG
AAATGGCGTAACCTCAAATGAAGGCAAGCACGTCAAAGAAAATTTCTTCG
TCATACAGTCTGAAGTACAGGCGTGTATGTGACTAACT

Coding sequence (CDS) from alignment at scaffold_6:446943..451280-

>mRNA_3476 ID=mRNA_3476|Name=jgi.p|Nanoce1779_2|669442|organism=Nannochloropsis oceanica|type=CDS|length=4017bp|location=Sequence derived from alignment at scaffold_6:446943..451280- (Nannochloropsis oceanica)
ATGAGCCACAATTCGTCGACGTCATCCCCCTCCGTGCAGCCGGTAGCACC
TTCATCAGACTCGATGCCTGCTGCTTCAATGCCGCCCTTGTCCCCTGGCG
CCTTCTCCACATCTTCGTTTTCAACCATCCCCTCCGCCTTCTCCTCCCCT
GCACGCCACCGCGACGGGGTAAGCAGTAGCAATAGCAGTGTGGCCAGCGG
CATAACTTCTGCCGCTTACGCAGCAGCTTCCGTCGGCGGCACCACTGCCA
GGACGTCGTCCAATTTGTCCACTGTCCACGCCTACAGTCAGCAACAACCG
CGGCAGCAGCAAGCAACCTCCGCCTCCTCGGCGCCGACGAATAACAGTTC
CTACAGCACCAACTATACGACACCCGTGCCTTCCCGGGCGTCCCATCAGC
CCCGTGCCTTGACCACGCCTGTTCATAGCAACGGTACAATCCCCAGCAAC
GCCCGTTTTCGTGCTGGCACTCTTGATACGTCCTTGTCTTCTAACGCTTA
CACCTCCTCCCGCACGCACGCGGCATCACCAATGCGTTCCGGAGCAGCGA
GCGGTGCCAGCAACAACGGAGTAAAAGGAGCTGGAGGATTATATATTTCT
CCGTCTTTAACACCAGCACGAACGCCGGAAGATGAGAGTGTGTTGTTGCA
TGTCCAATATGGCACACGAGTCGTCTTTCGAGGAACCAAAGGTGTGACTC
TCTCCGCCAGACCCGTGACTGACAGCACCAACACCAGCAGCAACGGTACG
CCTTCCATACCTGGCGGAGGGCCGACAACGCCTGGCGGGGGCATCACGAG
CGCCAGTAGCAGCAGCAGCAGCAGAAGCAGCAGCAACGCGGCGGTGTCAT
TTCGTGCCTGCACAGACGGACGAGGACTGGGCGAGGCAAGGGAGACTTTA
CTGTTGGTCAATTGCCTCAGGAGGGATGATCGGGGGCCGATAGCGTATGG
GGCTACTGTGGCGGTGCGGTGTGGTTGGGCAAAGGAAAGGTTTTTGGGAA
TACACAGCACGACTGGGGAGGTGGGGTTTTGGAGGACTCTGATTGGAGCA
GCGGAGAAATGGGTGTTGCTGCGCCCGAATGAAATCAAGTCTTTGAGGAG
TGATGTTGTTGGTAGGGCTGGGAGCAGTAGTAGCACTCCCTCTACCCGGG
GACATGCGCATGCTTTGCCGCTGTCTGGTATGGGGCCGGGAGGGAGAACG
GGAGATGCGGGGGGGTGGGTGCTGGCTGGGGACGCCATTGTCCTCCAAGC
GGTGTCCACCAGGGAAGTGGTGATGGCCAGGGAGGCTCCCGAGGATGGAA
TGGAGGTCATGTTGTGCCCGCCTGAGTCGGCGTTACTTTCGAATGCGTCT
TGGTCGGTGGGGTGGACGGGGACTCCCTTATACCCTGCTTGGAATATGAC
CAGGCCTTACCTAACTGGTGATTTCGTCACGCACCCTCGTCGGCATCATC
TTTCGACGGCACAAGAAAACCTTTTTTCGATCCTGCCACATGCCGCAAAT
AGGGATGAGGAACGGCTGGCTCCCAGGCCGTTGAGTGAATTTTCCTCGGG
GGAGCAAGAGGATTTGCTGGTCGAGGACTTGTTGTGGGTGGTTTCTGGGT
ACGAAGGGAAGTACATCAAGGCGTTCTTGCCCTCGTCCTTATCCTCCCTT
CCCTCATCGTCCTCATCTTTGGATGCGGCAGAAGGTGTGCGATTTAAATT
GACGGAGGGAGGGAGGGAGGGAGTGGAGGGGAGCCTGGTGGGGATGGTGG
AGAAGTTTCTGCCGTTGGGGGGGCATTGCTTGAGGCTACGCAGGTTCGTG
GATAAGAAGAGGAGGTATGACTATGGGATGGTAGCCCAAGCGCTTGCTGC
AGGGCTGCATGATCTGCTGTTGAAGAGTTACGCCTTGTTGTTAGCGCAGT
TGGAGCATAAGCACCGAGGGGCAGGGAGGGAGGGAGGAAGGGGTCTGACG
TTGCAGCAATTATGGTTTCATTTGCAGCCGGCGTTGTGGGGTTTGGAAGG
GTTGGGTGCCCTGTGTGCGAGGGTCAGGAATAAAAAAGGCGGGCAGTTGT
TGAATGAGCTGAGGGCGGCGGTGGCGGGGAGTGGGGATGAGAAGAGCGCG
CAGACTCATTCTTTTTTACTCGAAAAGGCAGCGGGGCCGTACATGGTCAT
GTTGGAAGGGTGGATCTATCGCGGGGTGCTCGAGGATCCTTATTGCGAGT
TTATGATTCGGGAGGAACAAGGCTTAGAGAAAGAGAATGTTCAGGAGGAC
TTTAATGCAGCGTATTGGGATGCGAGGAGCACGATCAGGCCAGAGCATGT
GTTTGGGGAGTTGGAGGAGTTCAGGCCCAAGATTTTGACCACGGGGAAGT
ATCTGAATGTGATACGGGAGTGTGGGCTTGATCCGGGTGTGGCTGAGCTT
GGTGAAGGCAGGGATGGGGCGTTGAGCGTAAGGGAGACAGGGAGAGGGGG
TGAAAGGATGCCAAAATTGAGGTTTTCAGCAGGAAAGGCGGCTGTGGGGG
AAGCGATTGATGTGGCGTATCGCCGCGCCTGCCGCTTGTTGTTGGACGTG
GTGTTGCGACAGCATCGTCTATTGCCACGATTGGCTTCGATTAAGCATTA
TTTTCTGCTGGACAAGGGGGATTTTTTCGTTCACTTTATGAATACTGCGG
AGAAGGAGCTGTTGAAAAGCGTGACCGACGTTTCCCCCTCCCGACTGGAG
GGCCTCTTGCATCTTTCGATACAGATGTCCGTGGCGAGCAACGACCCGTA
CAAAGACGATGTGAGCAGCTCCTTCTCGAATAAAACGCTGATTGAGCACT
TGAATGCGATTCATAAATCGGACCGCTTCGGCGGTGCTGCTGGTGGGGGA
GGGGGAGGGGGGGAGGGGTTGAACGTCCATATCTCTCCGGCCACTGCTGC
TGCTGCTGCTGCCTCCAACTCGATACATATACCTTCTCTCCAAGAAGCAG
ACTTGCCCGAGTTACCAAACCTCTTACTCCAACTTGACCTCTCCCCCTCC
TCCTTCGATATCAGCAGCAACACTTCTTCCCTCTATCCCTCCTCCTCCTC
CACCACCACCACCTCCGGAATCAAGGCCTATGAAGCCTTCATGCTAGAGA
CCCAAGTCAAATGGCCCCTCTCCCTCGTAGTCTCTCGTCGGGCCGTCACG
AAATACCAGCTCCTCTTTCGACACCTCTTCCTAGCCAAGTTCGTCGAGCG
GCGCCTGCACACTTCCTGGGCCGAGCAACAGAGCTACAAGGAGCTCGACG
TGAGGCAGGCTTTGGGTCTCGCATTTTGTGTAAGGCATAAGATGCAACAT
TTTCTTGCGACGTACATTTATTACATGATGTTCGAGGTGGTAGAACCACA
TTGGCATGTGTTGCAGGCGTGCCTGAGGACGGGGGAGGGGGTCGAACATC
TGGATGATGTGATTCGCTTACACCAGGAGTTTCAGGATTCCTGCTTGAAA
GAATGTTTATTGACGGATCAGTCTATCTTGAAGGTGCTGAATAAGATTTT
GGTGGTTTGTCTGTTGTTTGCTGCTTACATGGAACAAACAACGCGGGACA
TGGCTGAGGTGGCGGCATCGGTCTCGGAAGAAAGCGGCAGCTACAGCACG
AATTTAGAGGGAGAAGTTGACGTAGATGGAAGTGGAGTTATTTCGTTCAT
TCCGGCGACGAATGGTAGAGTAGGCAATCGGGGAGGGGGAGGGAGGAAGA
CACCGCAACATATTGATAATGGAGCGGTGCGTCGAGGGCGAGTAGCGAGG
CAGACGGCCGAGGTGCGGGCACGGGCTGTTGCGAGTGGGTTTGGGCCGAC
AATGGATGCGTTTGCCAAGAATTTGGACTTTCACACGGAGGAGTTTATGA
GGAGATTGTGGGAGGATTCGCGTGCGCAGTACCAATCCAGCCATTTGTCT
AACTTATTGGCTCGATTGGATTACAATGGTTTTTTTGCCGCTCAATTTGC
TCGACCGACTTTGTCCTCATCGCCGGGGAGGCAGCAACAGCAACAGCAGC
AGCAGCCTGTTTCGTGA

Synonyms

Publications