jgi.p|Nanoce1779_2|669442, gene_3476 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|669442
Unique Namegene_3476
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:446943..451280 -

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Properties
Property NameValue
TranscriptId669528
ProteinId669442
Product nameSpc97 / Spc98 family-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:446943..451280 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0000226microtubule cytoskeleton organization
Vocabulary: Cellular Component
TermDefinition
GO:0000922spindle pole
GO:0005815microtubule organizing center
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G01490NO08G01490Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669442mRNA_3476-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669442mRNA_3476Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|669442

>mRNA_3476-protein ID=mRNA_3476-protein|Name=jgi.p|Nanoce1779_2|669442|organism=Nannochloropsis oceanica|type=polypeptide|length=1339bp
MSHNSSTSSPSVQPVAPSSDSMPAASMPPLSPGAFSTSSFSTIPSAFSSP
ARHRDGVSSSNSSVASGITSAAYAAASVGGTTARTSSNLSTVHAYSQQQP
RQQQATSASSAPTNNSSYSTNYTTPVPSRASHQPRALTTPVHSNGTIPSN
ARFRAGTLDTSLSSNAYTSSRTHAASPMRSGAASGASNNGVKGAGGLYIS
PSLTPARTPEDESVLLHVQYGTRVVFRGTKGVTLSARPVTDSTNTSSNGT
PSIPGGGPTTPGGGITSASSSSSSRSSSNAAVSFRACTDGRGLGEARETL
LLVNCLRRDDRGPIAYGATVAVRCGWAKERFLGIHSTTGEVGFWRTLIGA
AEKWVLLRPNEIKSLRSDVVGRAGSSSSTPSTRGHAHALPLSGMGPGGRT
GDAGGWVLAGDAIVLQAVSTREVVMAREAPEDGMEVMLCPPESALLSNAS
WSVGWTGTPLYPAWNMTRPYLTGDFVTHPRRHHLSTAQENLFSILPHAAN
RDEERLAPRPLSEFSSGEQEDLLVEDLLWVVSGYEGKYIKAFLPSSLSSL
PSSSSSLDAAEGVRFKLTEGGREGVEGSLVGMVEKFLPLGGHCLRLRRFV
DKKRRYDYGMVAQALAAGLHDLLLKSYALLLAQLEHKHRGAGREGGRGLT
LQQLWFHLQPALWGLEGLGALCARVRNKKGGQLLNELRAAVAGSGDEKSA
QTHSFLLEKAAGPYMVMLEGWIYRGVLEDPYCEFMIREEQGLEKENVQED
FNAAYWDARSTIRPEHVFGELEEFRPKILTTGKYLNVIRECGLDPGVAEL
GEGRDGALSVRETGRGGERMPKLRFSAGKAAVGEAIDVAYRRACRLLLDV
VLRQHRLLPRLASIKHYFLLDKGDFFVHFMNTAEKELLKSVTDVSPSRLE
GLLHLSIQMSVASNDPYKDDVSSSFSNKTLIEHLNAIHKSDRFGGAAGGG
GGGGEGLNVHISPATAAAAAASNSIHIPSLQEADLPELPNLLLQLDLSPS
SFDISSNTSSLYPSSSSTTTTSGIKAYEAFMLETQVKWPLSLVVSRRAVT
KYQLLFRHLFLAKFVERRLHTSWAEQQSYKELDVRQALGLAFCVRHKMQH
FLATYIYYMMFEVVEPHWHVLQACLRTGEGVEHLDDVIRLHQEFQDSCLK
ECLLTDQSILKVLNKILVVCLLFAAYMEQTTRDMAEVAASVSEESGSYST
NLEGEVDVDGSGVISFIPATNGRVGNRGGGGRKTPQHIDNGAVRRGRVAR
QTAEVRARAVASGFGPTMDAFAKNLDFHTEEFMRRLWEDSRAQYQSSHLS
NLLARLDYNGFFAAQFARPTLSSSPGRQQQQQQQQPVS*
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Synonyms
Publications