jgi.p|Nanoce1779_2|628873, mRNA_3452 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|628873
Unique Name	mRNA_3452
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4198
Alignment location	scaffold_6:358854..364218 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	628959
Track	FilteredModels2
ProteinId	628873

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_6	supercontig	scaffold_6:358854..364218 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|628873	gene_3452	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|628873	mRNA_3452-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_3452	CDS_3452	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_6:358854..364218-
coding sequence from alignment at scaffold_6:358854..364218-

mRNA sequence

>mRNA_3452 ID=mRNA_3452|Name=jgi.p|Nanoce1779_2|628873|organism=Nannochloropsis oceanica|type=mRNA|length=4198bp
ACAGACGCGTAGAGCACACCCCGACAAAGCGGGCCTTTGTCATGCCGGCG
ACCGTAAAAGGCGTGCCCACCCTGATTTCCCTGCTGCTACTGGCGGGGAT
GGTCCTCACCAATACCCATGCGTTTATCCGGACACCTGCCGGCCGCTCTC
TTCATGTGCCCTGTCACTCCCTCCTCTCCTCCCGCCCGGCTGCACGCACC
CCCATCCTCCTTCCAACATCGCGCGCTAATCATAAGCTACGCCCATTCTG
CTCTGCGGCTGCTGCCTCGGCGGTCCCGCCTCCTCCCTCCTCGATCCCTG
CTATCACCAACGAGCCCAACGGCGACACGTCCAAGTCTCAAAAACTCTTC
GAACGCCCTTTCAAGGGCATCATGGAAGACGTCCGTCGCAAGGCCCCTCA
CTACCTGTCCGACTTCAAAGATGGTGCAAATCTCAAGGGAGTCGCCGCAA
CTTTCTTTCTCTTCTTCGCCTGTCTTGCCCCGGCCGTGGCTTTTGGTGGG
CTCATGGGCAAGCTCACAGAGGGAAACATTGGAACCATGGAGATGCTGCT
TGCCACCGCATACAATGGCATGGCCTACGCACTTTTCGCAGGGCAGCCGT
TGACGATCATTGGGAGCACGGGGCCGGTGTTAGCATTCACACTTGTGTTG
TACCGGACCGCGCAAAATTTGGCGTTACCTTTTTTGCCACTGTATTCGTG
GGTCGGGATTTGGACGTCTTTCATTCTGTTCGTGTCGTCGATAACGAGTT
TATCGAACATGGTGAATTACTTCACCCGCTTCACTGACGAGATTTTCTCG
TTGCTAATCTCTTTGATCTTCCTCTATGAGGCAGTCAAGGACTTGTCTTC
CTTCTTCCTCAACCCCTCCGTGGGGTTCGCCAAGGCACTCCTCTCCCTTG
TCGTCGCCTTTACCACGTTCAACACCGGTATCGCCCTGGCAGGCCTCCGT
CGTGGGAAGGTGCTCACGAAAGGAATTCGTGACACCATCGCTGATTTCGC
CCCCACCATTGGAGTTCTTGCCGGATGCTTCCTGACCGTGCTTGCTAAAA
CTCACAAGGGGGAAGTACTGCCAACGCTCCTCATTCCCGATACATTCACA
ACTTCTCTCGGTAGGCCTTGGTTGGTGAATATCTGGCAGTTGCCTGTCTG
GGCCCGGTGGGCGGCGTTTATCCCAGCCTTGATGTCGAGTGTATTGTTGT
TCATGGATCAGAATATTACGGTGAGGTTGGTGAATTCCCCGGCGCATAAG
ATAAAGAAAGGGTATGGCCTTCATCTGGACATGTTCGTTGTATCAATCTT
GACGTTTGTGAACTCTTTGTTCGGATTGCCTTGGTTGGTGGCGGCGACGG
TGAGGAGCTTAAACCATGTGAGGGCTTGTGCCCGGTTTGGGACGACACAG
GAGGGGGAGGTGGTCATCGAGGGCATGCAAGAAAATCGAATGACGGGGCT
GGCGATTCATTCGTTGATTGGGTTTGCGATTTTGAGCTGTAGGCCTCTCT
TGGGACAGGTCCCTCTGGCAGTGCTGATGGGGTTGTTCTTGTATTTGGGC
AAGAGTTCTTTGGGGGGGAATCAGATGTGGGAAAGGCTTAAGCTTCTGAT
TACAGACCCGGCCCAAAGGCCAAAGGCGGCATGGGCGCAGAAGGTGCCGT
ACAAGGTGAGTGCCGCGTTTACCGCGCTGCAGTTTGCGTGTTTGGGAGGG
ATGTGGGCGTTAAAGAGTTCGTCGATTGGTGTGCTTTTCCCGTTGTTGAT
TGCTGCCCTGGCCCCAATTCGGGTGGGGATCGAGAGGGTGGGGTGGTTCA
GTAAGAAGGACTTGGAGGTGTTGGATAGCGAGGATGAATGAACAGGTGCG
GTAGCATAGGAAAAGGGGGAAGTAAGATTATAAGTGAGGTCGAAAAATGG
GAGTTGTATCGTTGTTTGATGGGTTCAGAGCAGCATAAGAGTAAAGTGTT
ACTATTGCAGTGACTTCAACGGGAAACAAGAAGACTAATGTGAGATGTGA
ATGTGATCGACGGACATGCAAAACGAAGTAGGGAGAAGGGAGAGTAGACG
GCGAGCCTCCTTGAGGTACATATGAAAGGCAGATAGAAGCGAGTAAATGA
AGAGGGGGGGAGCTGATGGCATTTGCACGCAGGGCGTGACAATGAGAGCC
GAAGACGATAAAGAAAACGGGGAAAGGAGAAAGATACAACTAAAACTTGG
ACAAATCAAAAAGAGTAATCAGGAGACTGAAAACGAACAGAGGGCAACTT
ACCCTCGATATGCGAAATTCCTGGCTCCACATTTGGGTACAAGACGTCGA
CAGTAACTTCTGAACGTTTGTCTACATCGGTGGCACAAAACATCCTGTCG
ACAATTTCATGTCCCGAAAGGCAGCCTGTGTTGAAATCTCGCTTTCGCAA
GAACACATTTGACCACCACCACACTCGTCTATTGAGCGGTCATGGCTGCG
CAGACAAGCCACCAATACAAGCAGGATAAAGGGACTGAGTTGATACATGA
ACTGGAAGTGTGCGTCAGGAGCAGTAGGAGCAGCACGGCCTTGGCCGCGT
TCAAGCGTCTCCCGCTTGGGGCAGGCGTGTCTGTCAGCCTCGACAAGCCA
TCATTACCCAAGGGCATAAGGCCTGGCGCGGGACAAGCGCCACATTTCGT
GTGGGTGCTTGCAGGCGTGACATTGGCGCTGTTGCTGTTGGGAAAATTGC
CGGGTGTGGGGCTGGTGAATGGCGCAGTGCGGGATTTCTGCGAGCGGAAT
AACTTGGACATTTATGACAAGTTGGCGTATCGTCTGAGACTGTTGAAGGG
TCGCCTCGAACGCATCACCGACGGGCTCAAACGCCGATGGCTCACAGCCT
TCCCTCGTGAAGTCGACATCCTTCCTTCCACCTCCTACCCCGTTGCCCTT
ACCTTGGTGGAAAGAAGCAATATCGGGGGGTCGTTCCTCAAGTATAAATT
TGCACTTCCCCGTCCTACGCACGTCATGGAGCTGGATCTAGGACAACAGA
TAACTCTGATTGGGAGCACTCCGGAAGAGAGGGTTATGCGTGCAGCCTTT
GTGCCATGCTCGGAGAGGGGGGAGCCCGGGGTGATGGAGGTGGTATCGGA
AAAGAATAACCCCGATGACCCCAGTGTCCGCATTCTTGATACCTTGGCGA
TAGGCGAGACAATCCAGGCCACCCCTGGAGTCCGCCTTACCAATCGACAC
CCAGGGCCTATTAACAAGCTCCTCATCGTCGTGTCGAAGCTCGGTGTCGT
CCCCGCCCTCCAGTTTCTTAAGGCCCTCCTCCCCACCACTTCCGGTTACT
CTGTCGACTTCGCCAATGTTGTCTGGGTCAACGAGAGGCAAGATCAATAC
ATCCTCCAAGAAGAGCTGCAGGCGCTGTTTTACAAGTACAACAGGTTCGT
AGAGGGTTTGCTCTTCTTTCCTCCGTTCCCCCTCTCCTTTTGGTGAAGTC
GATCAGTGATCTTGGCTTCGTTTGATGAACCATCAGTCCAAAAAGCTTCA
ATCACTAGCAAACCTTAAATACTTCTTCCCTTTTTCCTTCCCTCTCCTTC
TCTCTTCCTCTGCTACCCATCCAACCAGCAAATTGGACGTATTTACGGTT
GCTGAGCGTGATCTCTTTATGGGTGACCTCGCGGCCAACTCCCAATTTCG
TATGTCCATTCCCCCTCCCTCCACCGATACACTCGTCCTAGTGGCGGGCC
CCGAGTATTTCACCACCAAAGCAATCGATTATTTGACCAAGAGTGGCTAT
GTAGAAGACGTGATTGTTACGTTGTAAGAGGAGAGTGATGAGGAGGGAGG
CAGAAGGGGGTTTTGTCTAGCAGGAGAGAAACCTTTGAGAGGTCGAGAGA
CGCTAAGGAGGGGATTGCAGGTCAGGTGACTCCCTGTGTGTTGATGATAA
ATGTTGTTCGTATTTCGTAGCGGGTACAAAAGCATAGCTCGCGGTTCTTT
CCCTCCACACACCCAAAAGATGTCGTTTTAATTTCCCCCCCCCGCACTGC
CTTCACAGATCCAGCGAGGGGACCACGTGTGCCCTGTGCCTTTTCCCCCA
CCATCTCCCATCTCCCATTCCAGGCATGATTTGACCTAAACCAAAGATGA
AGCGAAAAGTAGGAAATCAGCAAGCAAAAACAAGATTGAAAGGGAAACAA
GGTGAAGAAAAAAAGGAAAGGAAAAATGTGGCGAAGGCCGTAGACGAG

protein sequence of jgi.p|Nanoce1779_2|628873

>mRNA_3452-protein ID=mRNA_3452-protein|Name=jgi.p|Nanoce1779_2|628873|organism=Nannochloropsis oceanica|type=polypeptide|length=600bp
MPATVKGVPTLISLLLLAGMVLTNTHAFIRTPAGRSLHVPCHSLLSSRPA
ARTPILLPTSRANHKLRPFCSAAAASAVPPPPSSIPAITNEPNGDTSKSQ
KLFERPFKGIMEDVRRKAPHYLSDFKDGANLKGVAATFFLFFACLAPAVA
FGGLMGKLTEGNIGTMEMLLATAYNGMAYALFAGQPLTIIGSTGPVLAFT
LVLYRTAQNLALPFLPLYSWVGIWTSFILFVSSITSLSNMVNYFTRFTDE
IFSLLISLIFLYEAVKDLSSFFLNPSVGFAKALLSLVVAFTTFNTGIALA
GLRRGKVLTKGIRDTIADFAPTIGVLAGCFLTVLAKTHKGEVLPTLLIPD
TFTTSLGRPWLVNIWQLPVWARWAAFIPALMSSVLLFMDQNITVRLVNSP
AHKIKKGYGLHLDMFVVSILTFVNSLFGLPWLVAATVRSLNHVRACARFG
TTQEGEVVIEGMQENRMTGLAIHSLIGFAILSCRPLLGQVPLAVLMGLFL
YLGKSSLGGNQMWERLKLLITDPAQRPKAAWAQKVPYKVSAAFTALQFAC
LGGMWALKSSSIGVLFPLLIAALAPIRVGIERVGWFSKKDLEVLDSEDE*

mRNA from alignment at scaffold_6:358854..364218-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_3452 ID=mRNA_3452|Name=jgi.p|Nanoce1779_2|628873|organism=Nannochloropsis oceanica|type=mRNA|length=5365bp|location=Sequence derived from alignment at scaffold_6:358854..364218- (Nannochloropsis oceanica)
ACAGACGCGTAGAGCACACCCCGACAAAGCGGGCCTTTGTCATGCCGGCG
ACCGTAAAAGGCGTGCCCACCCTGATTTCCCTGCTGCTACTGGCGGGGAT
GGTCCTCACCAATACCCATGCGTTTATCCGGACACCTGCCGGCCGCTCTC
TTCATGTGCCCTGTCACTCCCTCCTCTCCTCCCGCCCGGCTGCACGCACC
CCCATCCTCCTTCCAACATCGCGCGCTAATCATAAGCTACGCCCATTCTG
CTCTGCGGCTGCTGCCTCGGCGGTCCCGCCTCCTCCCTCCTCGATCCCTG
CTATCACCAACGAGCCCAACGGCGACACGTCCAAGTCTCAAAAACTCTTC
GAACGCCCTTTCAAGGGCATCATGGAAGACGTCCGTCGCAAGGCCCCTCA
CTACCTGTCCGACTTCAAAGATGGTGCAAATCTCAAGGGAGTCGCCGCAA
CTTTCTTTCTCTTCTTCGCCTGTCTTGCCCCGGCCGTGGCTTTTGGTGGG
CTCATGGGCAAGCTCACAGAGGGAAACATTGGAACCATGGAGATGCTGCT
TGCCACCGCATACAATGGCATGGCCTACGCACTTTTCGCAGGGCAGCCGT
TGACGATCATTGGGAGCACGGGGCCGGTGTTAGCATTCACACTTGTGTTG
TACCGGACCGCGCAAAATTTGGCGTTACCTTTTTTGCCACTGTATTCGTG
GGTCGGGATTTGGACGTCTTTCATTCTGTTCGTGTCGTCGATAACGAGTT
TATCGAACATGGTGAATTACTTCACCCGCTTCACTGACGAGATTTTCTCG
TTGCTAATCTCTTTGATCTTCCTCTATGAGGCAGTCAAGGACTTGTCTTC
CTTCTTCCTCAACCCCTCCGTGGGGTTCGCCAAGGCACTCCTCTCCCTTG
TCGTCGCCTTTACCACGTTCAACACCGGTATCGCCCTGGCAGGCCTCCGT
CGTGGGAAGGTGCTCACGAAAGGAATTCGTGACACCATCGCTGATTTCGC
CCCCACCATTGGAGTTCTTGCCGGATGCTTCCTGACCGTGCTTGCTAAAA
CTCACAAGGGGGAAGTACTGCCAACGCTCCTCATTCCCGATACATTCACA
ACTTCTCTCGGTAGGCCTTGGTTGGTGAATATCTGGCAGTTGCCTGTCTG
GGCCCGGTGGGCGGCGTTTATCCCAGCCTTGATGTCGAGTGTATTGTTGT
TCATGGATCAGAATATTACGGTGAGGTTGGTGAATTCCCCGGCGCATAAG
ATAAAGAAAGGGTATGGCCTTCATCTGGACATGTTCGTTGTATCAATCTT
GACGTTTGTGAACTCTTTGTTCGGATTGCCTTGGTTGGTGGCGGCGACGG
TGAGGAGCTTAAACCATGTGAGGGCTTGTGCCCGGTTTGGGACGACACAG
GAGGGGGAGGTGGTCATCGAGGGCATGCAAGAAAATCGAATGACGGGGCT
GGCGATTCATTCGTTGATTGGGTTTGCGATTTTGAGCTGTAGGCCTCTCT
TGGGACAGGTCCCTCTGGCAGTGCTGATGGGGTTGTTCTTGTATTTGGGC
AAGAGTTCTTTGGGGGGGAATCAGATGTGGGAAAGGCTTAAGCTTCTGAT
TACAGACCCGGCCCAAAGGCCAAAGGCGGCATGGGCGCAGAAGGTGCCGT
ACAAGGTGAGTGCCGCGTTTACCGCGCTGCAGTTTGCGTGTTTGGGAGGG
ATGTGGGCGTTAAAGAGTTCGTCGATTGGTGTGCTTTTCCCGTTGTTGAT
TGCTGCCCTGGCCCCAATTCGGGTGGGGATCGAGAGGGTGGGGTGGTTCA
GTAAGAAGGACTTGGAGGTGTTGGATAGCGAGGATGAATGAACAGGTGCG
GTAGCATAGGAAAAGGGGGAAGTAAGATTATAAGTGAGGTCGAAAAATGG
GAGTTGTATCGTTGTTTGATGGGTTCAGAGCAGCATAAGAGTAAAGTGTT
ACTATTGCAGTGACTTCAACGGGAAACAAGAAGACTAATGTGAGATGTGA
ATGTGATCGACGGACATGCAAAACGAAGTAGGGAGAAGGGAGAGTAGACG
GCGAGCCTCCTTGAGGTACATATGAAAGGCAGATAGAAGCGAGTAAATGA
AGAGGGGGGGAGCTGATGGCATTTGCACGCAGGGCGTGACAATGAGAGCC
GAAGACGATAAAGAAAACGGGGAAAGGAGAAAGATACAACTAAAACTTGG
ACAAATCAAAAAGAGTAATCAGGAGACTGAAAACGAACAGAGGGCAACTT
ACCCTCGATATGCGAAATTCCTGGCTCCACATTTGGGTACAAGACGTCGA
CAGTAACTTCTGAACGTTTGTCTACATCGGTGGCACAAAACATCCTGTCG
ACAATTTCATGTCCCGAAAGGCAGCCTGTGTTGAAATCTCGCTTTCGCAA
GAACACATTTGACCACCACCACACTCGTCTATTGAGCGGTCATGGCTGCG
CAGACAAGCCACCAATACAAGCAGGATAAAGGGACTGAGTTGATACATGA
ACTGGAAGTGTGCGGTATGTCTTTTTGCAAAAATGCTGCCTGATCACCCC
TAATATAATGCCTTTCATTTAAAAAGAGGTAGCTGCCAGCCTAGGCTCGG
TCATGGTACGTCAAACATTACCTCGCTGCTTGAACGCTCGGCTTTCTCGA
CAAACTCGATAACACACAACATGGTCTCCCCACATTGTCTCCTTGTTTGT
CCGCAAGCGATAGTGGGAACATTATTCCTACTCCTCTTTGTTAACGTTTC
TCGTCTTATTGCCCTTGCTACCTCACCCCCGCAGGTGGTCGTTGGCTTCG
CCGTGCCGCGCCTTTTGTTGGGTTCGCGAGCGATCGTCTTGCGTGAAGAA
GTGCGAAGGAGACAAGCCCACTTCGACGACCACGGCAAGGGGAAACAAGC
GTCGCCCGGCCATCCACGCGTCCCTTTTTACACATTCGTTATGGAAAGCG
AGTCGCCGCCTGACGGGGCAAGAAGAAAAGGAGAAAGAGGAGAGGGAGGC
CAAGCATCGTGGTCGTTGGGCGGGCGGCAGCAGCAGCAGCAGCAGCAGCA
ACAGCAAAGGGCAGGGGCAGAGGCAGGAGCGCCATCACCACCTCGACCAC
CAGCGTCAGGAATGCTTTATTCGACCCTGTTCTTTCTGGTGGTGGTAATA
TTTGGTACCATGATGGAAGCAACAAATTCCTTCGTCTTGGGAAGCCGCGG
CAACGGGCGGGGCGGCAACAATCCCTCCTCCTTACAACTCCCGCGCACCA
GTGAGCTCCAACGAAGGATGACTTTCCTCTCCCCTTCCCTGATCGCCCAC
CGTCAATCCACAGTCAGGAGCAGTAGGAGCAGCACGGCCTTGGCCGCGTT
CAAGCGTCTCCCGCTTGGGGCAGGCGTGTCTGTCAGCCTCGACAAGCCAT
CATTACCCAAGGGCATAAGGCCTGGCGCGGGACAAGCGCCACATTTCGTG
TGGGTGCTTGCAGGCGTGACATTGGCGCTGTTGCTGTTGGGAAAATTGCC
GGGTGTGGGGCTGGTGAATGGCGCAGTGCGGGATTTCTGCGAGCGGAATA
ACTTGGACATTTATGACAAGTTGGCGTATCGTCTGAGGTATGCTCCTGCC
TCTCTGTGTGCTTCGGTCGGAGTGAGCGGACGAATGGTCGAATATGTGTC
ATGAGTTTGCTTTGCTTTCACTCTTTCGTGCTCTGACGCTGCAATCCCTT
CGTCCCCTCCCTTCTTCCCATTCCTCCCCCCCTCCCCTCCCCCTATACTC
ATCCCTTCCCTCCTCCCAGACTGTTGAAGGGTCGCCTCGAACGCATCACC
GACGGGCTCAAACGCCGATGGCTCACAGCCTTCCCTCGTGAAGTCGACAT
CCTTCCTTCCACCTCCTACCCCGTTGCCCTTACCTTGGTGGAAAGAAGCA
ATATCGGGGGGTCGTTCCTCAAGTATAAATTTGCACTTCCCCGTCCTACG
CACGTCATGGAGCTGGATCTAGGACAACAGATAACTCTGATTGGGAGCAC
TCCGGAAGAGAGGGTTATGCGTGCAGCCTTTGTGCCATGCTCGGAGAGGG
GGGAGCCCGGGGTGATGGAGGTGGTATCGGAAAAGAATAACCCCGATGAC
CCCAGTGTCCGCATTCTTGATACCTTGGCGATAGGCGAGACAATCCAGGT
AAATATGCATGCATGCTCTTCTCCCTCTTCTCCCCCTCTGTCGCACTCCC
TGAAGAGCTTCCACACATTCCGTTGCAGCCCGACTCGCCGATCGGTACCT
CGTAGTTGTCTAGAAGCTAGTAGTAGGCTTTGTCCCCGCCTCACTTCTGC
CCGCCTTCCCTCCCTCCCTCCCTTCCCCCACCAGGCCACCCCTGGAGTCC
GCCTTACCAATCGACACCCAGGGCCTATTAACAAGCTCCTCATCGTCGTG
TCGAAGCTCGGTGTCGTCCCCGCCCTCCAGTTTCTTAAGGCCCTCCTCCC
CACCACTTCCGGTTACTCTGTCGACTTCGCCAATGTTGTCTGGGTCAACG
AGAGGCAAGATCAATACATCCTCCAAGAAGAGCTGCAGGCGCTGTTTTAC
AAGTACAACAGGTTCGTAGAGGGTTTGCTCTTCTTTCCTCCGTTCCCCCT
CTCCTTTTGGTGAAGTCGATCAGTGATCTTGGCTTCGTTTGATGAACCAT
CAGTCCAAAAAGCTTCAATCACTAGCAAACCTTAAATACTTCTTCCCTTT
TTCCTTCCCTCTCCTTCTCTCTTCCTCTGCTACCCATCCAACCAGCAAAT
TGGACGTATTTACGGTTGCTGAGCGTGATCTCTTTATGGGTGACCTCGCG
GCCAACTCCCAATTTCGTATGTCCATTCCCCCTCCCTCCACCGATACACT
CGTCCTAGTGGCGGGCCCCGAGTATTTCACCACCAAAGCAATCGATTATT
TGACCAAGAGTGGCTATGTAGAAGACGTGATTGTTACGTTGTAAGAGGAG
AGTGATGAGGAGGGAGGCAGAAGGGGGTTTTGTCTAGCAGGAGAGAAACC
TTTGAGAGGTCGAGAGACGCTAAGGAGGGGATTGCAGGTCAGGTGACTCC
CTGTGTGTTGATGATAAATGTTGTTCGTATTTCGTAGCGGGTACAAAAGC
ATAGCTCGCGGTTCTTTCCCTCCACACACCCAAAAGATGTCGTTTTAATT
TCCCCCCCCCGCACTGCCTTCACAGATCCAGCGAGGGGACCACGTGTGCC
CTGTGCCTTTTCCCCCACCATCTCCCATCTCCCATTCCAGGCATGATTTG
ACCTAAACCAAAGATGAAGCGAAAAGTAGGAAATCAGCAAGCAAAAACAA
GATTGAAAGGGAAACAAGGTGAAGAAAAAAAGGAAAGGAAAAATGTGGCG
AAGGCCGTAGACGAG

Coding sequence (CDS) from alignment at scaffold_6:358854..364218-

>mRNA_3452 ID=mRNA_3452|Name=jgi.p|Nanoce1779_2|628873|organism=Nannochloropsis oceanica|type=CDS|length=1800bp|location=Sequence derived from alignment at scaffold_6:358854..364218- (Nannochloropsis oceanica)
ATGCCGGCGACCGTAAAAGGCGTGCCCACCCTGATTTCCCTGCTGCTACT
GGCGGGGATGGTCCTCACCAATACCCATGCGTTTATCCGGACACCTGCCG
GCCGCTCTCTTCATGTGCCCTGTCACTCCCTCCTCTCCTCCCGCCCGGCT
GCACGCACCCCCATCCTCCTTCCAACATCGCGCGCTAATCATAAGCTACG
CCCATTCTGCTCTGCGGCTGCTGCCTCGGCGGTCCCGCCTCCTCCCTCCT
CGATCCCTGCTATCACCAACGAGCCCAACGGCGACACGTCCAAGTCTCAA
AAACTCTTCGAACGCCCTTTCAAGGGCATCATGGAAGACGTCCGTCGCAA
GGCCCCTCACTACCTGTCCGACTTCAAAGATGGTGCAAATCTCAAGGGAG
TCGCCGCAACTTTCTTTCTCTTCTTCGCCTGTCTTGCCCCGGCCGTGGCT
TTTGGTGGGCTCATGGGCAAGCTCACAGAGGGAAACATTGGAACCATGGA
GATGCTGCTTGCCACCGCATACAATGGCATGGCCTACGCACTTTTCGCAG
GGCAGCCGTTGACGATCATTGGGAGCACGGGGCCGGTGTTAGCATTCACA
CTTGTGTTGTACCGGACCGCGCAAAATTTGGCGTTACCTTTTTTGCCACT
GTATTCGTGGGTCGGGATTTGGACGTCTTTCATTCTGTTCGTGTCGTCGA
TAACGAGTTTATCGAACATGGTGAATTACTTCACCCGCTTCACTGACGAG
ATTTTCTCGTTGCTAATCTCTTTGATCTTCCTCTATGAGGCAGTCAAGGA
CTTGTCTTCCTTCTTCCTCAACCCCTCCGTGGGGTTCGCCAAGGCACTCC
TCTCCCTTGTCGTCGCCTTTACCACGTTCAACACCGGTATCGCCCTGGCA
GGCCTCCGTCGTGGGAAGGTGCTCACGAAAGGAATTCGTGACACCATCGC
TGATTTCGCCCCCACCATTGGAGTTCTTGCCGGATGCTTCCTGACCGTGC
TTGCTAAAACTCACAAGGGGGAAGTACTGCCAACGCTCCTCATTCCCGAT
ACATTCACAACTTCTCTCGGTAGGCCTTGGTTGGTGAATATCTGGCAGTT
GCCTGTCTGGGCCCGGTGGGCGGCGTTTATCCCAGCCTTGATGTCGAGTG
TATTGTTGTTCATGGATCAGAATATTACGGTGAGGTTGGTGAATTCCCCG
GCGCATAAGATAAAGAAAGGGTATGGCCTTCATCTGGACATGTTCGTTGT
ATCAATCTTGACGTTTGTGAACTCTTTGTTCGGATTGCCTTGGTTGGTGG
CGGCGACGGTGAGGAGCTTAAACCATGTGAGGGCTTGTGCCCGGTTTGGG
ACGACACAGGAGGGGGAGGTGGTCATCGAGGGCATGCAAGAAAATCGAAT
GACGGGGCTGGCGATTCATTCGTTGATTGGGTTTGCGATTTTGAGCTGTA
GGCCTCTCTTGGGACAGGTCCCTCTGGCAGTGCTGATGGGGTTGTTCTTG
TATTTGGGCAAGAGTTCTTTGGGGGGGAATCAGATGTGGGAAAGGCTTAA
GCTTCTGATTACAGACCCGGCCCAAAGGCCAAAGGCGGCATGGGCGCAGA
AGGTGCCGTACAAGGTGAGTGCCGCGTTTACCGCGCTGCAGTTTGCGTGT
TTGGGAGGGATGTGGGCGTTAAAGAGTTCGTCGATTGGTGTGCTTTTCCC
GTTGTTGATTGCTGCCCTGGCCCCAATTCGGGTGGGGATCGAGAGGGTGG
GGTGGTTCAGTAAGAAGGACTTGGAGGTGTTGGATAGCGAGGATGAATGA

Synonyms

Publications