jgi.p|Nanoce1779_2|628873, gene_3452 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|628873
Unique Namegene_3452
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_6:358854..364218 -

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Properties
Property NameValue
TranscriptId628959
ProteinId628873
Product nameHCO3- transporter family-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_6supercontigscaffold_6:358854..364218 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005452inorganic anion exchanger activity
Vocabulary: Biological Process
TermDefinition
GO:0006820anion transport
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL083ncniL083Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G01230NO08G01230Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|628873mRNA_3452-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|628873mRNA_3452Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|628873

>mRNA_3452-protein ID=mRNA_3452-protein|Name=jgi.p|Nanoce1779_2|628873|organism=Nannochloropsis oceanica|type=polypeptide|length=600bp
MPATVKGVPTLISLLLLAGMVLTNTHAFIRTPAGRSLHVPCHSLLSSRPA
ARTPILLPTSRANHKLRPFCSAAAASAVPPPPSSIPAITNEPNGDTSKSQ
KLFERPFKGIMEDVRRKAPHYLSDFKDGANLKGVAATFFLFFACLAPAVA
FGGLMGKLTEGNIGTMEMLLATAYNGMAYALFAGQPLTIIGSTGPVLAFT
LVLYRTAQNLALPFLPLYSWVGIWTSFILFVSSITSLSNMVNYFTRFTDE
IFSLLISLIFLYEAVKDLSSFFLNPSVGFAKALLSLVVAFTTFNTGIALA
GLRRGKVLTKGIRDTIADFAPTIGVLAGCFLTVLAKTHKGEVLPTLLIPD
TFTTSLGRPWLVNIWQLPVWARWAAFIPALMSSVLLFMDQNITVRLVNSP
AHKIKKGYGLHLDMFVVSILTFVNSLFGLPWLVAATVRSLNHVRACARFG
TTQEGEVVIEGMQENRMTGLAIHSLIGFAILSCRPLLGQVPLAVLMGLFL
YLGKSSLGGNQMWERLKLLITDPAQRPKAAWAQKVPYKVSAAFTALQFAC
LGGMWALKSSSIGVLFPLLIAALAPIRVGIERVGWFSKKDLEVLDSEDE*
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Synonyms
Publications