jgi.p|Nanoce1779_2|584898, mRNA_3199 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|584898
Unique Name	mRNA_3199
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	5276
Alignment location	scaffold_7:895873..901148 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	584984
Track	FilteredModels2
ProteinId	584898

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_7	supercontig	scaffold_7:895873..901148 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|584898	gene_3199	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|584898	mRNA_3199-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_3199	CDS_3199	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_7:895873..901148-
coding sequence from alignment at scaffold_7:895873..901148-

mRNA sequence

>mRNA_3199 ID=mRNA_3199|Name=jgi.p|Nanoce1779_2|584898|organism=Nannochloropsis oceanica|type=mRNA|length=5276bp
ACAGGCCGCTCTCTTGCAGGGCGTAACCTGCTCTGTTTCCAGCAACCTCG
TGCATCGACTAAAGGGAGATCGAAGCACGAGCACGCGCAACGCTTGAACC
CTCCGCATCGTTCCTGGTCAAAACGCCTCGTCCAAGCGTCGTCATCGTCG
TCGCCAAGCCAACCCAATCATGTATCGCGCTCTGCGTTCTCCGTTGGGGT
CGCGAGCCATGCAGGTTTTTCAAGCGCACCAGTCGGGGGCGGCCAACCGG
TTGGCTCCTGGGGCAGGGAATGCTGTTGCCTTCTCTTCGAACCAAGGCGT
CAAGGGCATCATCCTCCGCCGCCTCATGGCCACGCAGTCAGACGCCAGCG
CAAAGCCGCCCACAAAGCGGGCATGGTTGGTTTTGGAGGACGGGACACGC
CTGGAGGGTTACTCCTTTGGGGCAGACAAGGCCATGAATGGGGAGGTTGT
TTTCTCGACGGGCATGGTGGGCTACACCGAGTCCTTGACCGACCCTTCCT
ATCGCCGTCAAATTTTGACACTGACCACGCCCATGGTGGGCAATTACGGA
GTTCCGGATCCGAATGTGTTGGATGAGCTTGGCTTGCCCAAGGCGTTTGA
GAGCTACAAGATTCATGCGGCAGGATTGGTTGTGCAGGACTACTCCCACC
ACTTCTCGCATTGGAACGCACACTTTTCGTTGGGGGACTGGTTAAAGCAG
GAGGGCATTCCTGCTATTGCAGGGATTGATACGAGGATGTTGACGAAGAA
GATTCGGTCCCGTGGGGCCATGCTTGGGCGGATTGAATTCGAGGATGGGG
CGAAGCCTGAGTTGGACGACGTGAATAAGAAGCATTTGGTTCAAGAAGTG
TCGGTGCCGGAGCCAAGGATTTATGGGAAGGGGAATGATGTGAAAATCTT
AGCGGTGGATTGCGGGATAAAGAATAATATCATTCGACACTTGGTGAGGA
AAGGGGCGGAGGTCAAAGTCGTCCCTTGGGACCACGATATTGTCAAGGAA
ATGAAGCACCACCAGGGCTTATTCTTGTCCAATGGACCTGGGGATCCGAC
GATGTGCGGGACAACGGTTGAGCACTTGAGGAAGCTGGTGAATGACCCGT
CTTTCATGAAGCCAATTTTTGGGATTTGCCTGGGCAATCAGCTATTAGGG
TTGGCTGCTGGTGCCAAGGCGACGAAGCTCCCATTTGGGAACCGTGGACA
GAACCAACCGGTGGTGAACATGTTGACCGGGAAGGCGTTCATCACCCCTC
AGAACCACGGGTATGCGATTGATGACACTACCTTGCCTGCACCTTGGAAG
CCCCTGTTTCGTAATTTGAACGACCAATCGAATGAGGGGATCTTGCACAC
CCAGAAGCCGATATTTTCTGCGCAGTTTCATCCGGAGGCCGCAGGCGGGC
CGACGGACACGGAGTTTTTCTTTGACGTTTTCTTGGACACGGTCCGAGAG
CAGAGAAAGTCAATCGTATTCCCGCCTGTCAAACCGACGCCGGTGAGGCC
CGAAGTGAAGAAGGTGCTGTTGCTGGGGTCTGGAGGGTTAAGTATTGGGC
AGGCAGGTGAGTTTGATTATTCCGGGGCACAGGCCATCAAGGCGTTGAAG
GAAGAAGGGCTTGAGGTGGTGTTGATGAACCCGAACATTGCTTCGGTCCA
GACGAATGTGGACGACAAGTCGAGTGCGAAAGCCGATCAAGTGTATTTCT
TGCCGGTCAACACGGACTACGTTGAGCAGGTGATCAAGAGGGAGAGGCCT
GATGGATTGGTGCTGTCCATGGGGGGACAGACTGCATTAAATTGTGGGCT
GGAATTGCACCATAAGGGCGTTTTGTCCAAGTATAATGTGAAGGTGCTGG
GGACGCAAATAGACGCGATTGAGGCTTCGGAGGATCGGCAGTTGTTTTCG
GATAAGCTGAATGAGATCAATGAAAAGATTGCCCCATCCATCACGGCGTC
AACGATCGCGCAGGCTCTGACTGCAGCGGAGAAAATTGGGTATCCGTGTA
TGATCCGTTCTGCGTATGCGTTGGGCGGGTTGGGGTCAGGGATTTGTAGG
GATGCGGCTCATTTGGAAGAGATGGCAGCGAAAGCCTTAAGTTTGTCTAG
TCAGATTTTGGTGGAGAAGAGTTTGAAGGGCTGGAAAGAGGTAGAGTACG
AGGTGGTCAGGGACGCGGCGGATAACTGTATTACGGTGTGTAATATGGAG
AATTTCGATCCGTTGGGCGTGCATACCGGGGACTCGATTGTAGTGGCGCC
GTCACAGACGTTGTCGAACGAGGAGTATCACATGTTGAGGGAGACGGCGT
TGAAGGTGGTGCGACATTTGGGAATCGTCGGGGAGTGTAACATTCAGTAT
GCGCTTGATCCGTATTCGCTTGAGTATTGTATTATCGAGGTGAATGCGCG
GTTATCTCGTTCGTCGGCGTTGGCCAGTAAGGCGACTGGATACCCTTTGG
CGTTTGTGGCCGCAAAATTGTCGTTGGGGATTACCCTGCCGGAGATTCAG
AACAGTGTGACCAAGAGCACGCAGGCTTGTTTTGAACCGAGTCTGGATTA
TATTGTCACGAAGATCCCGAGGTGGGATTTGAGTAAGTTCCAGGGAGTGG
CGACTGAGATCGGGTCATCGATGAAGTCGGTAGGGGAGGTGATGGCCATC
GGCCGGACGTGGGAGGAGTGCATCCAGAAGGCGATGCGCATGGTGGACCC
GGCGATAGAAGGATTTCAGATGAGGAAGAGGTATGATGACGCGACGGCGT
TGGAGTATGAGCTGACAAATCCGAGTGACAAGAGGTTGTATGCGATCGCG
CAGGTATTTGCGGAGAAGACCAAGACGGTGGAAGACATTCATGAGTTGAC
GGCTATTGATCACTGGTTTTTGAGGCGTCTGGAGCGAATTTCCCAGCATC
GAGATGTGTTGGTGAAGCATGGTAGTGGCACGGGTGCGCTTGATTCCTTG
CCTCGGGAGGATTTGCATTTGGCGAAGAAGCTAGGCTTTTCGGACAGGCA
GTTGGGGGCGTTGCTTGGAACGACGGATGATGCGGTCAGATCGAAGCGAG
AGGCTGCAGGGATTGTACCGGCCGTGAAACAGATCGATACGCTGGCGGCT
GAGTACCCCGCGAAGACGAATTATTTGTATTGCACGTACAATGGGCAGGA
GGACGACGTGGTCAAGGGGGAGGGGGGAGTGATTGTGCTGGGCTCTGGGA
CATACAGGATCGGAAGCTCGGTAGAGTTTGATTGGTGTGGTGTGAGTGCG
ATTCGAGCGTTGCGTGGCATGGGGTACCGGACGACGATGGTGAATTATAA
CCCGGAGACGGTCTCGACGGATTATGATGAATGCGACCAGCTTTATTTCG
ATGAGCTGAGCAAGGAGCGGATTAGAGATATCTACTCCCGGGAGGGCGCT
TCAGGTGTGGTTGTTTCGGTTGGAGGGCAGATCCCGAATAATCTGGCCAT
GCCCCTGCATAGGGCTGGAGTGAAAATCATGGGGACGACGCCGGAGATGA
TTGACCAGGCAGAGGACCGTGCGAAGTTCTCGGCGTTGATGGAGTCGTTG
GGGATCCAGCAGCCAGCATGGAAGGAGCTTGCAGATACCGCCTCTGCGTT
GGCGTTTGCGGAGGAGGTTGGATACCCTGTCCTGGTGCGTCCGTCGTACG
TGCTTTCGGGGGCGGCAATGTCGGTGGCGTTCAGTGATGAGGCGTTGTTG
ACGGTGCTGGCGCATGCTGCGGACGTCTCACAGGAGCACCCGGTGGTGAT
TACCAAGTTTGTGGACGGCGCGAACGAGATCGAAATGGACGCCGTTGCCA
TGGATGGGATGGTGGTTGCCGCGGCCATGCACGAGCACGTGGAGAATGCG
GGAGTGCATTCGGGGGATGCGACGTTGATGTTGCCCCCCCAGCGGATCTC
GACCTACACGGCCATGCGTGTGAACGAGGCCACGAAGAAAATCGCCAAGG
CCCTTAATATCACAGGCCCGTTCAATATGCAGTTTTTGTCCAAGGGGAAA
GACGTGAGTGTGATTGAGTGCAATTTACGCGCGTCTCGCTCTGTACCGTT
CGTCTCCAAGACGATGGGGGTGGATTTTATTGAGGCGGCCGCACGCTGCA
TGGTGGGGGAGGATGTGACTGGGATGAATCTCCCTCAGCTGGGGCAGACC
GGCCGTCCCTCGGGGTACGTGGGTGTGAAGGCTCCCATGTTCTCTTTCAC
GCGCTTGCGTGGCGCGGACCCGGTGTTGGGGGTGGAAATGGCGTCGACTG
GCGAGGTCGCGTGCTTTGGTGCGAACATCCACGAGGCCTTCCTCAAGGCC
TTGATCTCGACGGGTTTTAAGGTCCCGGAGAAGAATATTCTGTTTTCTGT
CCAGGACTCCCTGCGTGACGACATCATCCACTCTGCTTTCCAGCTGCACT
CGTTGGGCTACAACCTGTTCGCCACCAAGGAGACGTACGAATTCCTCCAG
GCCTGCCACGTGCCTTGCCACCTCCTCCACTACCCGAACCAGCCCGAGAA
ACACCCCAATGTCCTCGAGCACTTGAAGAACGGGAAGATTGATCTGGTTA
TCAACTTGCCCACACCTGAGAGTAAGCAGGTGGAGAACAACTACCTTATG
CGTAGGACGGCCGTGGATTTTGGCGTGCCCCTGCTGACGAACATTCATTT
GACCAAGCTCTTAGCGGAGGCAATTACCAAGTACAAGAAAGGAGAGTTGA
TTGGCGTCCAGTCCAAAAATTTGTTTGATTACTACGATGCTGAGGCGCCC
GAGGAGGCCTGGACGTCGCCGTCGGAGTTCCATTAGATTGTCTGGGGTTA
AGGGGGAGAGAGGATGAAAAGATGGATGGTGAGATGGATTTTTGACTATT
ATTTTATTTTTATATATTCATTTTTTTTGGAGGGACATGGTTTCATGGTT
GCGTATTCATGCGAGTGGGGGGCTGATAGCAAAAGGAAAGGAGGAGGGTG
TGTGTATAAGCGTGGGGAAGAAGAGGAAAAGTCGATGGAGGACGGAGTGT
CGGAGGGAGTCAGAAGACGGATGCGTGTAACCCCTTCTTTTTTGAGATAC
GACTATTGTCTATAAAGGAAACGGGAGAAAGACATAAATGCGTGCATGTG
CGTGATTTGGGTATATCCGACACTGAAGAGAGAAGAAAAGAAAGGAAGGA
AGATCAAGAAAAGACGCATGCGCACGGTGATGAGGTAGATTGGTGCCTTT
TTATAAGTCAAACCATATCGTGGATGAGGGGACTTTTAAATCAGCTATGG
GAAAAGAATAAAGTCGCCCTTTCAGA

protein sequence of jgi.p|Nanoce1779_2|584898

>mRNA_3199-protein ID=mRNA_3199-protein|Name=jgi.p|Nanoce1779_2|584898|organism=Nannochloropsis oceanica|type=polypeptide|length=1539bp
MYRALRSPLGSRAMQVFQAHQSGAANRLAPGAGNAVAFSSNQGVKGIILR
RLMATQSDASAKPPTKRAWLVLEDGTRLEGYSFGADKAMNGEVVFSTGMV
GYTESLTDPSYRRQILTLTTPMVGNYGVPDPNVLDELGLPKAFESYKIHA
AGLVVQDYSHHFSHWNAHFSLGDWLKQEGIPAIAGIDTRMLTKKIRSRGA
MLGRIEFEDGAKPELDDVNKKHLVQEVSVPEPRIYGKGNDVKILAVDCGI
KNNIIRHLVRKGAEVKVVPWDHDIVKEMKHHQGLFLSNGPGDPTMCGTTV
EHLRKLVNDPSFMKPIFGICLGNQLLGLAAGAKATKLPFGNRGQNQPVVN
MLTGKAFITPQNHGYAIDDTTLPAPWKPLFRNLNDQSNEGILHTQKPIFS
AQFHPEAAGGPTDTEFFFDVFLDTVREQRKSIVFPPVKPTPVRPEVKKVL
LLGSGGLSIGQAGEFDYSGAQAIKALKEEGLEVVLMNPNIASVQTNVDDK
SSAKADQVYFLPVNTDYVEQVIKRERPDGLVLSMGGQTALNCGLELHHKG
VLSKYNVKVLGTQIDAIEASEDRQLFSDKLNEINEKIAPSITASTIAQAL
TAAEKIGYPCMIRSAYALGGLGSGICRDAAHLEEMAAKALSLSSQILVEK
SLKGWKEVEYEVVRDAADNCITVCNMENFDPLGVHTGDSIVVAPSQTLSN
EEYHMLRETALKVVRHLGIVGECNIQYALDPYSLEYCIIEVNARLSRSSA
LASKATGYPLAFVAAKLSLGITLPEIQNSVTKSTQACFEPSLDYIVTKIP
RWDLSKFQGVATEIGSSMKSVGEVMAIGRTWEECIQKAMRMVDPAIEGFQ
MRKRYDDATALEYELTNPSDKRLYAIAQVFAEKTKTVEDIHELTAIDHWF
LRRLERISQHRDVLVKHGSGTGALDSLPREDLHLAKKLGFSDRQLGALLG
TTDDAVRSKREAAGIVPAVKQIDTLAAEYPAKTNYLYCTYNGQEDDVVKG
EGGVIVLGSGTYRIGSSVEFDWCGVSAIRALRGMGYRTTMVNYNPETVST
DYDECDQLYFDELSKERIRDIYSREGASGVVVSVGGQIPNNLAMPLHRAG
VKIMGTTPEMIDQAEDRAKFSALMESLGIQQPAWKELADTASALAFAEEV
GYPVLVRPSYVLSGAAMSVAFSDEALLTVLAHAADVSQEHPVVITKFVDG
ANEIEMDAVAMDGMVVAAAMHEHVENAGVHSGDATLMLPPQRISTYTAMR
VNEATKKIAKALNITGPFNMQFLSKGKDVSVIECNLRASRSVPFVSKTMG
VDFIEAAARCMVGEDVTGMNLPQLGQTGRPSGYVGVKAPMFSFTRLRGAD
PVLGVEMASTGEVACFGANIHEAFLKALISTGFKVPEKNILFSVQDSLRD
DIIHSAFQLHSLGYNLFATKETYEFLQACHVPCHLLHYPNQPEKHPNVLE
HLKNGKIDLVINLPTPESKQVENNYLMRRTAVDFGVPLLTNIHLTKLLAE
AITKYKKGELIGVQSKNLFDYYDAEAPEEAWTSPSEFH*

mRNA from alignment at scaffold_7:895873..901148-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_3199 ID=mRNA_3199|Name=jgi.p|Nanoce1779_2|584898|organism=Nannochloropsis oceanica|type=mRNA|length=5276bp|location=Sequence derived from alignment at scaffold_7:895873..901148- (Nannochloropsis oceanica)
ACAGGCCGCTCTCTTGCAGGGCGTAACCTGCTCTGTTTCCAGCAACCTCG
TGCATCGACTAAAGGGAGATCGAAGCACGAGCACGCGCAACGCTTGAACC
CTCCGCATCGTTCCTGGTCAAAACGCCTCGTCCAAGCGTCGTCATCGTCG
TCGCCAAGCCAACCCAATCATGTATCGCGCTCTGCGTTCTCCGTTGGGGT
CGCGAGCCATGCAGGTTTTTCAAGCGCACCAGTCGGGGGCGGCCAACCGG
TTGGCTCCTGGGGCAGGGAATGCTGTTGCCTTCTCTTCGAACCAAGGCGT
CAAGGGCATCATCCTCCGCCGCCTCATGGCCACGCAGTCAGACGCCAGCG
CAAAGCCGCCCACAAAGCGGGCATGGTTGGTTTTGGAGGACGGGACACGC
CTGGAGGGTTACTCCTTTGGGGCAGACAAGGCCATGAATGGGGAGGTTGT
TTTCTCGACGGGCATGGTGGGCTACACCGAGTCCTTGACCGACCCTTCCT
ATCGCCGTCAAATTTTGACACTGACCACGCCCATGGTGGGCAATTACGGA
GTTCCGGATCCGAATGTGTTGGATGAGCTTGGCTTGCCCAAGGCGTTTGA
GAGCTACAAGATTCATGCGGCAGGATTGGTTGTGCAGGACTACTCCCACC
ACTTCTCGCATTGGAACGCACACTTTTCGTTGGGGGACTGGTTAAAGCAG
GAGGGCATTCCTGCTATTGCAGGGATTGATACGAGGATGTTGACGAAGAA
GATTCGGTCCCGTGGGGCCATGCTTGGGCGGATTGAATTCGAGGATGGGG
CGAAGCCTGAGTTGGACGACGTGAATAAGAAGCATTTGGTTCAAGAAGTG
TCGGTGCCGGAGCCAAGGATTTATGGGAAGGGGAATGATGTGAAAATCTT
AGCGGTGGATTGCGGGATAAAGAATAATATCATTCGACACTTGGTGAGGA
AAGGGGCGGAGGTCAAAGTCGTCCCTTGGGACCACGATATTGTCAAGGAA
ATGAAGCACCACCAGGGCTTATTCTTGTCCAATGGACCTGGGGATCCGAC
GATGTGCGGGACAACGGTTGAGCACTTGAGGAAGCTGGTGAATGACCCGT
CTTTCATGAAGCCAATTTTTGGGATTTGCCTGGGCAATCAGCTATTAGGG
TTGGCTGCTGGTGCCAAGGCGACGAAGCTCCCATTTGGGAACCGTGGACA
GAACCAACCGGTGGTGAACATGTTGACCGGGAAGGCGTTCATCACCCCTC
AGAACCACGGGTATGCGATTGATGACACTACCTTGCCTGCACCTTGGAAG
CCCCTGTTTCGTAATTTGAACGACCAATCGAATGAGGGGATCTTGCACAC
CCAGAAGCCGATATTTTCTGCGCAGTTTCATCCGGAGGCCGCAGGCGGGC
CGACGGACACGGAGTTTTTCTTTGACGTTTTCTTGGACACGGTCCGAGAG
CAGAGAAAGTCAATCGTATTCCCGCCTGTCAAACCGACGCCGGTGAGGCC
CGAAGTGAAGAAGGTGCTGTTGCTGGGGTCTGGAGGGTTAAGTATTGGGC
AGGCAGGTGAGTTTGATTATTCCGGGGCACAGGCCATCAAGGCGTTGAAG
GAAGAAGGGCTTGAGGTGGTGTTGATGAACCCGAACATTGCTTCGGTCCA
GACGAATGTGGACGACAAGTCGAGTGCGAAAGCCGATCAAGTGTATTTCT
TGCCGGTCAACACGGACTACGTTGAGCAGGTGATCAAGAGGGAGAGGCCT
GATGGATTGGTGCTGTCCATGGGGGGACAGACTGCATTAAATTGTGGGCT
GGAATTGCACCATAAGGGCGTTTTGTCCAAGTATAATGTGAAGGTGCTGG
GGACGCAAATAGACGCGATTGAGGCTTCGGAGGATCGGCAGTTGTTTTCG
GATAAGCTGAATGAGATCAATGAAAAGATTGCCCCATCCATCACGGCGTC
AACGATCGCGCAGGCTCTGACTGCAGCGGAGAAAATTGGGTATCCGTGTA
TGATCCGTTCTGCGTATGCGTTGGGCGGGTTGGGGTCAGGGATTTGTAGG
GATGCGGCTCATTTGGAAGAGATGGCAGCGAAAGCCTTAAGTTTGTCTAG
TCAGATTTTGGTGGAGAAGAGTTTGAAGGGCTGGAAAGAGGTAGAGTACG
AGGTGGTCAGGGACGCGGCGGATAACTGTATTACGGTGTGTAATATGGAG
AATTTCGATCCGTTGGGCGTGCATACCGGGGACTCGATTGTAGTGGCGCC
GTCACAGACGTTGTCGAACGAGGAGTATCACATGTTGAGGGAGACGGCGT
TGAAGGTGGTGCGACATTTGGGAATCGTCGGGGAGTGTAACATTCAGTAT
GCGCTTGATCCGTATTCGCTTGAGTATTGTATTATCGAGGTGAATGCGCG
GTTATCTCGTTCGTCGGCGTTGGCCAGTAAGGCGACTGGATACCCTTTGG
CGTTTGTGGCCGCAAAATTGTCGTTGGGGATTACCCTGCCGGAGATTCAG
AACAGTGTGACCAAGAGCACGCAGGCTTGTTTTGAACCGAGTCTGGATTA
TATTGTCACGAAGATCCCGAGGTGGGATTTGAGTAAGTTCCAGGGAGTGG
CGACTGAGATCGGGTCATCGATGAAGTCGGTAGGGGAGGTGATGGCCATC
GGCCGGACGTGGGAGGAGTGCATCCAGAAGGCGATGCGCATGGTGGACCC
GGCGATAGAAGGATTTCAGATGAGGAAGAGGTATGATGACGCGACGGCGT
TGGAGTATGAGCTGACAAATCCGAGTGACAAGAGGTTGTATGCGATCGCG
CAGGTATTTGCGGAGAAGACCAAGACGGTGGAAGACATTCATGAGTTGAC
GGCTATTGATCACTGGTTTTTGAGGCGTCTGGAGCGAATTTCCCAGCATC
GAGATGTGTTGGTGAAGCATGGTAGTGGCACGGGTGCGCTTGATTCCTTG
CCTCGGGAGGATTTGCATTTGGCGAAGAAGCTAGGCTTTTCGGACAGGCA
GTTGGGGGCGTTGCTTGGAACGACGGATGATGCGGTCAGATCGAAGCGAG
AGGCTGCAGGGATTGTACCGGCCGTGAAACAGATCGATACGCTGGCGGCT
GAGTACCCCGCGAAGACGAATTATTTGTATTGCACGTACAATGGGCAGGA
GGACGACGTGGTCAAGGGGGAGGGGGGAGTGATTGTGCTGGGCTCTGGGA
CATACAGGATCGGAAGCTCGGTAGAGTTTGATTGGTGTGGTGTGAGTGCG
ATTCGAGCGTTGCGTGGCATGGGGTACCGGACGACGATGGTGAATTATAA
CCCGGAGACGGTCTCGACGGATTATGATGAATGCGACCAGCTTTATTTCG
ATGAGCTGAGCAAGGAGCGGATTAGAGATATCTACTCCCGGGAGGGCGCT
TCAGGTGTGGTTGTTTCGGTTGGAGGGCAGATCCCGAATAATCTGGCCAT
GCCCCTGCATAGGGCTGGAGTGAAAATCATGGGGACGACGCCGGAGATGA
TTGACCAGGCAGAGGACCGTGCGAAGTTCTCGGCGTTGATGGAGTCGTTG
GGGATCCAGCAGCCAGCATGGAAGGAGCTTGCAGATACCGCCTCTGCGTT
GGCGTTTGCGGAGGAGGTTGGATACCCTGTCCTGGTGCGTCCGTCGTACG
TGCTTTCGGGGGCGGCAATGTCGGTGGCGTTCAGTGATGAGGCGTTGTTG
ACGGTGCTGGCGCATGCTGCGGACGTCTCACAGGAGCACCCGGTGGTGAT
TACCAAGTTTGTGGACGGCGCGAACGAGATCGAAATGGACGCCGTTGCCA
TGGATGGGATGGTGGTTGCCGCGGCCATGCACGAGCACGTGGAGAATGCG
GGAGTGCATTCGGGGGATGCGACGTTGATGTTGCCCCCCCAGCGGATCTC
GACCTACACGGCCATGCGTGTGAACGAGGCCACGAAGAAAATCGCCAAGG
CCCTTAATATCACAGGCCCGTTCAATATGCAGTTTTTGTCCAAGGGGAAA
GACGTGAGTGTGATTGAGTGCAATTTACGCGCGTCTCGCTCTGTACCGTT
CGTCTCCAAGACGATGGGGGTGGATTTTATTGAGGCGGCCGCACGCTGCA
TGGTGGGGGAGGATGTGACTGGGATGAATCTCCCTCAGCTGGGGCAGACC
GGCCGTCCCTCGGGGTACGTGGGTGTGAAGGCTCCCATGTTCTCTTTCAC
GCGCTTGCGTGGCGCGGACCCGGTGTTGGGGGTGGAAATGGCGTCGACTG
GCGAGGTCGCGTGCTTTGGTGCGAACATCCACGAGGCCTTCCTCAAGGCC
TTGATCTCGACGGGTTTTAAGGTCCCGGAGAAGAATATTCTGTTTTCTGT
CCAGGACTCCCTGCGTGACGACATCATCCACTCTGCTTTCCAGCTGCACT
CGTTGGGCTACAACCTGTTCGCCACCAAGGAGACGTACGAATTCCTCCAG
GCCTGCCACGTGCCTTGCCACCTCCTCCACTACCCGAACCAGCCCGAGAA
ACACCCCAATGTCCTCGAGCACTTGAAGAACGGGAAGATTGATCTGGTTA
TCAACTTGCCCACACCTGAGAGTAAGCAGGTGGAGAACAACTACCTTATG
CGTAGGACGGCCGTGGATTTTGGCGTGCCCCTGCTGACGAACATTCATTT
GACCAAGCTCTTAGCGGAGGCAATTACCAAGTACAAGAAAGGAGAGTTGA
TTGGCGTCCAGTCCAAAAATTTGTTTGATTACTACGATGCTGAGGCGCCC
GAGGAGGCCTGGACGTCGCCGTCGGAGTTCCATTAGATTGTCTGGGGTTA
AGGGGGAGAGAGGATGAAAAGATGGATGGTGAGATGGATTTTTGACTATT
ATTTTATTTTTATATATTCATTTTTTTTGGAGGGACATGGTTTCATGGTT
GCGTATTCATGCGAGTGGGGGGCTGATAGCAAAAGGAAAGGAGGAGGGTG
TGTGTATAAGCGTGGGGAAGAAGAGGAAAAGTCGATGGAGGACGGAGTGT
CGGAGGGAGTCAGAAGACGGATGCGTGTAACCCCTTCTTTTTTGAGATAC
GACTATTGTCTATAAAGGAAACGGGAGAAAGACATAAATGCGTGCATGTG
CGTGATTTGGGTATATCCGACACTGAAGAGAGAAGAAAAGAAAGGAAGGA
AGATCAAGAAAAGACGCATGCGCACGGTGATGAGGTAGATTGGTGCCTTT
TTATAAGTCAAACCATATCGTGGATGAGGGGACTTTTAAATCAGCTATGG
GAAAAGAATAAAGTCGCCCTTTCAGA

Coding sequence (CDS) from alignment at scaffold_7:895873..901148-

>mRNA_3199 ID=mRNA_3199|Name=jgi.p|Nanoce1779_2|584898|organism=Nannochloropsis oceanica|type=CDS|length=4617bp|location=Sequence derived from alignment at scaffold_7:895873..901148- (Nannochloropsis oceanica)
ATGTATCGCGCTCTGCGTTCTCCGTTGGGGTCGCGAGCCATGCAGGTTTT
TCAAGCGCACCAGTCGGGGGCGGCCAACCGGTTGGCTCCTGGGGCAGGGA
ATGCTGTTGCCTTCTCTTCGAACCAAGGCGTCAAGGGCATCATCCTCCGC
CGCCTCATGGCCACGCAGTCAGACGCCAGCGCAAAGCCGCCCACAAAGCG
GGCATGGTTGGTTTTGGAGGACGGGACACGCCTGGAGGGTTACTCCTTTG
GGGCAGACAAGGCCATGAATGGGGAGGTTGTTTTCTCGACGGGCATGGTG
GGCTACACCGAGTCCTTGACCGACCCTTCCTATCGCCGTCAAATTTTGAC
ACTGACCACGCCCATGGTGGGCAATTACGGAGTTCCGGATCCGAATGTGT
TGGATGAGCTTGGCTTGCCCAAGGCGTTTGAGAGCTACAAGATTCATGCG
GCAGGATTGGTTGTGCAGGACTACTCCCACCACTTCTCGCATTGGAACGC
ACACTTTTCGTTGGGGGACTGGTTAAAGCAGGAGGGCATTCCTGCTATTG
CAGGGATTGATACGAGGATGTTGACGAAGAAGATTCGGTCCCGTGGGGCC
ATGCTTGGGCGGATTGAATTCGAGGATGGGGCGAAGCCTGAGTTGGACGA
CGTGAATAAGAAGCATTTGGTTCAAGAAGTGTCGGTGCCGGAGCCAAGGA
TTTATGGGAAGGGGAATGATGTGAAAATCTTAGCGGTGGATTGCGGGATA
AAGAATAATATCATTCGACACTTGGTGAGGAAAGGGGCGGAGGTCAAAGT
CGTCCCTTGGGACCACGATATTGTCAAGGAAATGAAGCACCACCAGGGCT
TATTCTTGTCCAATGGACCTGGGGATCCGACGATGTGCGGGACAACGGTT
GAGCACTTGAGGAAGCTGGTGAATGACCCGTCTTTCATGAAGCCAATTTT
TGGGATTTGCCTGGGCAATCAGCTATTAGGGTTGGCTGCTGGTGCCAAGG
CGACGAAGCTCCCATTTGGGAACCGTGGACAGAACCAACCGGTGGTGAAC
ATGTTGACCGGGAAGGCGTTCATCACCCCTCAGAACCACGGGTATGCGAT
TGATGACACTACCTTGCCTGCACCTTGGAAGCCCCTGTTTCGTAATTTGA
ACGACCAATCGAATGAGGGGATCTTGCACACCCAGAAGCCGATATTTTCT
GCGCAGTTTCATCCGGAGGCCGCAGGCGGGCCGACGGACACGGAGTTTTT
CTTTGACGTTTTCTTGGACACGGTCCGAGAGCAGAGAAAGTCAATCGTAT
TCCCGCCTGTCAAACCGACGCCGGTGAGGCCCGAAGTGAAGAAGGTGCTG
TTGCTGGGGTCTGGAGGGTTAAGTATTGGGCAGGCAGGTGAGTTTGATTA
TTCCGGGGCACAGGCCATCAAGGCGTTGAAGGAAGAAGGGCTTGAGGTGG
TGTTGATGAACCCGAACATTGCTTCGGTCCAGACGAATGTGGACGACAAG
TCGAGTGCGAAAGCCGATCAAGTGTATTTCTTGCCGGTCAACACGGACTA
CGTTGAGCAGGTGATCAAGAGGGAGAGGCCTGATGGATTGGTGCTGTCCA
TGGGGGGACAGACTGCATTAAATTGTGGGCTGGAATTGCACCATAAGGGC
GTTTTGTCCAAGTATAATGTGAAGGTGCTGGGGACGCAAATAGACGCGAT
TGAGGCTTCGGAGGATCGGCAGTTGTTTTCGGATAAGCTGAATGAGATCA
ATGAAAAGATTGCCCCATCCATCACGGCGTCAACGATCGCGCAGGCTCTG
ACTGCAGCGGAGAAAATTGGGTATCCGTGTATGATCCGTTCTGCGTATGC
GTTGGGCGGGTTGGGGTCAGGGATTTGTAGGGATGCGGCTCATTTGGAAG
AGATGGCAGCGAAAGCCTTAAGTTTGTCTAGTCAGATTTTGGTGGAGAAG
AGTTTGAAGGGCTGGAAAGAGGTAGAGTACGAGGTGGTCAGGGACGCGGC
GGATAACTGTATTACGGTGTGTAATATGGAGAATTTCGATCCGTTGGGCG
TGCATACCGGGGACTCGATTGTAGTGGCGCCGTCACAGACGTTGTCGAAC
GAGGAGTATCACATGTTGAGGGAGACGGCGTTGAAGGTGGTGCGACATTT
GGGAATCGTCGGGGAGTGTAACATTCAGTATGCGCTTGATCCGTATTCGC
TTGAGTATTGTATTATCGAGGTGAATGCGCGGTTATCTCGTTCGTCGGCG
TTGGCCAGTAAGGCGACTGGATACCCTTTGGCGTTTGTGGCCGCAAAATT
GTCGTTGGGGATTACCCTGCCGGAGATTCAGAACAGTGTGACCAAGAGCA
CGCAGGCTTGTTTTGAACCGAGTCTGGATTATATTGTCACGAAGATCCCG
AGGTGGGATTTGAGTAAGTTCCAGGGAGTGGCGACTGAGATCGGGTCATC
GATGAAGTCGGTAGGGGAGGTGATGGCCATCGGCCGGACGTGGGAGGAGT
GCATCCAGAAGGCGATGCGCATGGTGGACCCGGCGATAGAAGGATTTCAG
ATGAGGAAGAGGTATGATGACGCGACGGCGTTGGAGTATGAGCTGACAAA
TCCGAGTGACAAGAGGTTGTATGCGATCGCGCAGGTATTTGCGGAGAAGA
CCAAGACGGTGGAAGACATTCATGAGTTGACGGCTATTGATCACTGGTTT
TTGAGGCGTCTGGAGCGAATTTCCCAGCATCGAGATGTGTTGGTGAAGCA
TGGTAGTGGCACGGGTGCGCTTGATTCCTTGCCTCGGGAGGATTTGCATT
TGGCGAAGAAGCTAGGCTTTTCGGACAGGCAGTTGGGGGCGTTGCTTGGA
ACGACGGATGATGCGGTCAGATCGAAGCGAGAGGCTGCAGGGATTGTACC
GGCCGTGAAACAGATCGATACGCTGGCGGCTGAGTACCCCGCGAAGACGA
ATTATTTGTATTGCACGTACAATGGGCAGGAGGACGACGTGGTCAAGGGG
GAGGGGGGAGTGATTGTGCTGGGCTCTGGGACATACAGGATCGGAAGCTC
GGTAGAGTTTGATTGGTGTGGTGTGAGTGCGATTCGAGCGTTGCGTGGCA
TGGGGTACCGGACGACGATGGTGAATTATAACCCGGAGACGGTCTCGACG
GATTATGATGAATGCGACCAGCTTTATTTCGATGAGCTGAGCAAGGAGCG
GATTAGAGATATCTACTCCCGGGAGGGCGCTTCAGGTGTGGTTGTTTCGG
TTGGAGGGCAGATCCCGAATAATCTGGCCATGCCCCTGCATAGGGCTGGA
GTGAAAATCATGGGGACGACGCCGGAGATGATTGACCAGGCAGAGGACCG
TGCGAAGTTCTCGGCGTTGATGGAGTCGTTGGGGATCCAGCAGCCAGCAT
GGAAGGAGCTTGCAGATACCGCCTCTGCGTTGGCGTTTGCGGAGGAGGTT
GGATACCCTGTCCTGGTGCGTCCGTCGTACGTGCTTTCGGGGGCGGCAAT
GTCGGTGGCGTTCAGTGATGAGGCGTTGTTGACGGTGCTGGCGCATGCTG
CGGACGTCTCACAGGAGCACCCGGTGGTGATTACCAAGTTTGTGGACGGC
GCGAACGAGATCGAAATGGACGCCGTTGCCATGGATGGGATGGTGGTTGC
CGCGGCCATGCACGAGCACGTGGAGAATGCGGGAGTGCATTCGGGGGATG
CGACGTTGATGTTGCCCCCCCAGCGGATCTCGACCTACACGGCCATGCGT
GTGAACGAGGCCACGAAGAAAATCGCCAAGGCCCTTAATATCACAGGCCC
GTTCAATATGCAGTTTTTGTCCAAGGGGAAAGACGTGAGTGTGATTGAGT
GCAATTTACGCGCGTCTCGCTCTGTACCGTTCGTCTCCAAGACGATGGGG
GTGGATTTTATTGAGGCGGCCGCACGCTGCATGGTGGGGGAGGATGTGAC
TGGGATGAATCTCCCTCAGCTGGGGCAGACCGGCCGTCCCTCGGGGTACG
TGGGTGTGAAGGCTCCCATGTTCTCTTTCACGCGCTTGCGTGGCGCGGAC
CCGGTGTTGGGGGTGGAAATGGCGTCGACTGGCGAGGTCGCGTGCTTTGG
TGCGAACATCCACGAGGCCTTCCTCAAGGCCTTGATCTCGACGGGTTTTA
AGGTCCCGGAGAAGAATATTCTGTTTTCTGTCCAGGACTCCCTGCGTGAC
GACATCATCCACTCTGCTTTCCAGCTGCACTCGTTGGGCTACAACCTGTT
CGCCACCAAGGAGACGTACGAATTCCTCCAGGCCTGCCACGTGCCTTGCC
ACCTCCTCCACTACCCGAACCAGCCCGAGAAACACCCCAATGTCCTCGAG
CACTTGAAGAACGGGAAGATTGATCTGGTTATCAACTTGCCCACACCTGA
GAGTAAGCAGGTGGAGAACAACTACCTTATGCGTAGGACGGCCGTGGATT
TTGGCGTGCCCCTGCTGACGAACATTCATTTGACCAAGCTCTTAGCGGAG
GCAATTACCAAGTACAAGAAAGGAGAGTTGATTGGCGTCCAGTCCAAAAA
TTTGTTTGATTACTACGATGCTGAGGCGCCCGAGGAGGCCTGGACGTCGC
CGTCGGAGTTCCATTAG

Synonyms

Publications