jgi.p|Nanoce1779_2|584898, gene_3199 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|584898
Unique Namegene_3199
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_7:895873..901148 -

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Properties
Property NameValue
TranscriptId584984
ProteinId584898
Product namecarbamoyl-phosphate synthase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_7supercontigscaffold_7:895873..901148 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004087carbamoyl-phosphate synthase (ammonia) activity
GO:0003824catalytic activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0006807nitrogen compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL092ncniL092Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G03910NO05G03910Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|584898mRNA_3199-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|584898mRNA_3199Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|584898

>mRNA_3199-protein ID=mRNA_3199-protein|Name=jgi.p|Nanoce1779_2|584898|organism=Nannochloropsis oceanica|type=polypeptide|length=1539bp
MYRALRSPLGSRAMQVFQAHQSGAANRLAPGAGNAVAFSSNQGVKGIILR
RLMATQSDASAKPPTKRAWLVLEDGTRLEGYSFGADKAMNGEVVFSTGMV
GYTESLTDPSYRRQILTLTTPMVGNYGVPDPNVLDELGLPKAFESYKIHA
AGLVVQDYSHHFSHWNAHFSLGDWLKQEGIPAIAGIDTRMLTKKIRSRGA
MLGRIEFEDGAKPELDDVNKKHLVQEVSVPEPRIYGKGNDVKILAVDCGI
KNNIIRHLVRKGAEVKVVPWDHDIVKEMKHHQGLFLSNGPGDPTMCGTTV
EHLRKLVNDPSFMKPIFGICLGNQLLGLAAGAKATKLPFGNRGQNQPVVN
MLTGKAFITPQNHGYAIDDTTLPAPWKPLFRNLNDQSNEGILHTQKPIFS
AQFHPEAAGGPTDTEFFFDVFLDTVREQRKSIVFPPVKPTPVRPEVKKVL
LLGSGGLSIGQAGEFDYSGAQAIKALKEEGLEVVLMNPNIASVQTNVDDK
SSAKADQVYFLPVNTDYVEQVIKRERPDGLVLSMGGQTALNCGLELHHKG
VLSKYNVKVLGTQIDAIEASEDRQLFSDKLNEINEKIAPSITASTIAQAL
TAAEKIGYPCMIRSAYALGGLGSGICRDAAHLEEMAAKALSLSSQILVEK
SLKGWKEVEYEVVRDAADNCITVCNMENFDPLGVHTGDSIVVAPSQTLSN
EEYHMLRETALKVVRHLGIVGECNIQYALDPYSLEYCIIEVNARLSRSSA
LASKATGYPLAFVAAKLSLGITLPEIQNSVTKSTQACFEPSLDYIVTKIP
RWDLSKFQGVATEIGSSMKSVGEVMAIGRTWEECIQKAMRMVDPAIEGFQ
MRKRYDDATALEYELTNPSDKRLYAIAQVFAEKTKTVEDIHELTAIDHWF
LRRLERISQHRDVLVKHGSGTGALDSLPREDLHLAKKLGFSDRQLGALLG
TTDDAVRSKREAAGIVPAVKQIDTLAAEYPAKTNYLYCTYNGQEDDVVKG
EGGVIVLGSGTYRIGSSVEFDWCGVSAIRALRGMGYRTTMVNYNPETVST
DYDECDQLYFDELSKERIRDIYSREGASGVVVSVGGQIPNNLAMPLHRAG
VKIMGTTPEMIDQAEDRAKFSALMESLGIQQPAWKELADTASALAFAEEV
GYPVLVRPSYVLSGAAMSVAFSDEALLTVLAHAADVSQEHPVVITKFVDG
ANEIEMDAVAMDGMVVAAAMHEHVENAGVHSGDATLMLPPQRISTYTAMR
VNEATKKIAKALNITGPFNMQFLSKGKDVSVIECNLRASRSVPFVSKTMG
VDFIEAAARCMVGEDVTGMNLPQLGQTGRPSGYVGVKAPMFSFTRLRGAD
PVLGVEMASTGEVACFGANIHEAFLKALISTGFKVPEKNILFSVQDSLRD
DIIHSAFQLHSLGYNLFATKETYEFLQACHVPCHLLHYPNQPEKHPNVLE
HLKNGKIDLVINLPTPESKQVENNYLMRRTAVDFGVPLLTNIHLTKLLAE
AITKYKKGELIGVQSKNLFDYYDAEAPEEAWTSPSEFH*
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Synonyms
Publications