jgi.p|Nanoce1779_2|584712, mRNA_3146 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|584712
Unique Name	mRNA_3146
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	5074
Alignment location	scaffold_7:769286..774359 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	584798
Track	FilteredModels2
ProteinId	584712

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_7	supercontig	scaffold_7:769286..774359 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|584712	gene_3146	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|584712	mRNA_3146-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_3146	CDS_3146	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_7:769286..774359+
coding sequence from alignment at scaffold_7:769286..774359+

mRNA sequence

>mRNA_3146 ID=mRNA_3146|Name=jgi.p|Nanoce1779_2|584712|organism=Nannochloropsis oceanica|type=mRNA|length=5074bp
ACAGCTAAGATGTTGGACAGTGTCTTGCCCGAGGAGGTATGGAAAGAGGC
TCAACCTGTGCTCTCCATCCAGGGTGAGGTGGACTGGGAACCCCACATCC
ACGACGTCTTCATCCGTGCCCTCCACACCGTAAGCCTCGACAAGGGAAGC
AGCATCAGCGGCCCCTTGGGCAGCACCCTGACGAGCGGTGGCCTCAGCAG
CATGGCAGCGACAATTTCAACTCCAAATAAAACTCCGGGCCTTAATGGCA
TTGTCAACGTGCCCTTTCGTTTTCTGAGTCTGGCCAAAACAGTCGTCTTT
CCCCCAAAGAAACCTACCCATCCCCTCAAGGCTGCGGACGGTCGCCCCCT
GGAGGGCTACACGGTGGGAGGCCTGGTCAAGCAGAATTGGATCAAGAAAC
ACGTGTCACAATTACCCTCCGCTGCCATCTTGCTTGCCCCATTTGACAAC
AGTTGGTCAGCGGCGGAGTGGGGGCGGAGAGAGTTGGTGCTGTGGCAGGA
CATGGAACGCTTGAGGCAACAAGTCGGCCCACGCGATGTCCGCATTTTTG
TGGTGTTGATAAGGAGGGCGGGACTGCCTAGCGGCATGAGCGTTGGGGAT
GCAGCGGAGGATGCAAGGGAGAGCGAGGAAAGGTTGGTGGCTTTCAGGCG
ACGGACGCCTCCGGTGTTTGAGGCGGGGAAGATGGTGTACGTCCTGCAAT
ACCCCCAGGATCTGCAACCTTCCGCACCGGGCCTCAGAAGGATGTATAAG
CATGTAAGGGATTTATCATCGGGCTACTATTTTTTGCATGGGAAGCGAGT
GAAACGCTGGGAGAGTGCCTTGAACAGACATGCGCAGCTGCCGCTGATTG
TGAGGTATCGCTTCAAACAAGCCTTTTGGTACGAATTTATGGGGCACGCC
GAGAAGGCTCTCAAACACTTCAGAAAAACATTTGATGCACTAATAGAGCT
ACAAGCAGGGTGGTCTAACTTGAATCCATCTACATTTACTGAAGGACCGG
TGGTGCGAGGGGGAGCGCCTGCTCTAGGGTTGACTACGTCGACGTCCCCC
TCAGCTTCCCAGGCGAGTGCGCTTCAATCGAGCAATGCGCATGTGTTGGG
GGGCTGGGTATCGCAGATTAAGGCGGTGGCGGAGGTGGTGGCGTTTAAGA
TTTGTTACTACTCGATGAGGGAGGCGAGGCATGGAGAGGCCTTGAGGCAG
TTCCGGTTGTTGATGTCCACATGGGGGTGGAAGAAGCAGCAGAGGGTAGG
GAGAGCTGTCGATGGCGATGCTGGAACAGGCAGACCCTTGATAACGATGA
TGCCTTCTTCGTCGTTCTCGTCGTCGTTCTCTTCCTCCTCTACGTCGACT
TCTTCGCCACTGGATGGGAGTTGTAGCGGGGGGCTTGACACCACGCCACG
AGGAGCAGCAGGAGCTCCTTCAGCAGCACCACCCACAGAATACAACCGTC
TTGACTTTCTCTCCTACAAATGGACCGCACGGCAAAATCAAATTTTTGGC
GATCTTCTCCAACTATTTCCGTGCTTTCCCTCCCCCCCTTCCAGCATCAG
CAACAGCAGCAGCAACAGCAGTAGCGCAACAGCAGCAGCTACAATAATGA
CGTATATGGACCCGGACCACTATTTCTTTAATGCTGCGCTCGAGATAGCA
AAACAAAGGGAAATGGGTCTTTTCCTACAGGCAAATCCACGGCCGGAGAG
TAAATTAATGGTCAGGTTCGAGTCGCACATGGGCTCAGGGGCGGGGCCAT
TATTGGGGTTGCCTTTGTATATGGGTGGGAGGCCGAGGTTGGTCGATTCG
AACATAGAAAATGGAATCGGGGAAGGAGATATTTGTGACTTAGTACAATT
GATTTTAGAGAGGGAAGAGGCGGCGGGCGGGGAGGTGCGGAGGGAAGAGG
TGTTGCGCTTGTTGGTGGCGGCTGTAAGTGTGTATGATCCGTCGAGACCG
AGGAGGCCACGGTTTAAGGGAATGCAGCATGTGAGGCTGGCGGACGAATT
GATGGAGGCGGGGAGGGAGAGAGAGGCTTGGGGGCATTATTGCACAGCGT
TGAAGAGGTATGAGAGGTATGAGAAATTAGGGCTGGAGGGAGGAGGATGT
GGAGGGAGTGTGGGATGGAGTTTGCCGACGGTGGTGATGTTGGGGAGGAT
GAGGGTGTGCGCGTTGAGGCTGGGAGGGGTCGAAAAGAATTTGGGACAAT
ACCTTGATTTGACTCTGAAGCTGTTGAGTCAGGATTTGCGTGGGATGGTG
GGGGAGGAGACTCGAAAGCTATTTTGGGAGGAGGTGCTCTTCTTGGTGTT
TGGGATCCAGCGGGAAGAGAGGGGGCAGCAGCAGCAGCAAGCCTCCTCGT
TATGGTCATCGATTTTCACCTTCCACGAGCAACAGCAGCGACAGCCCCCT
ACTAATTTTACCTCGTCCGTATCGAAGCTTGGACCCGTTACTTACGACGA
CAGTGGGGAAGAGACCGCCTCCTCCGTTTCCACCTCCCTGGAGCCAATGC
TCACTCTTCTGACCGACACGGTGCAAGTGGACTTGAACTGCGGCTGGCGA
CAGCTGGTTTCCTTCTCCTTGTGCTTTCCCGATGCTACTGCTGCAATGGG
GTGTTCTTGTCTTGTGCTCCTGCGGGTTGTCTCCCATTTACCCTTGCCCT
TGCATGTGAGTGAGATGCTGCTTCGTTTTAACAAACCTTACATTGGCGCC
GTTCGGATTGTGGAGGCGTCCTCCCTCCCTGCCTCAACCGCCTCGGCCTT
GGATAGGATTAAACAATCATTTACCGCCGCGCCTGCTCTTGTTGCTCCTC
CTCTTCAACCAGCAGTAAAAGTTGATGACCAGAACACTGCTCACGTGACG
CTTTCCCTGTTGCTGCAGCCCGACAAACCCCTCGACATCCCCCACACCCT
CTCCCTCCCCATGGGCGAGGCCGTCGAAGTAGGCGACCTGCTCCACGCCG
TGCAACTTCAACTTCTGATCAACGCCCCCAACTCAACCTCCCCCTCCTTC
TCCTCCCTTTTTTCACCTTTTCCTCCTTTGCGTCGCTCTCTCTGTCTGAA
TCTCCCATCGGGGGTCGCCTACACAGATGGCCTCGGTGTTACGAGAGCCA
ACGTCTTCAAAGGCCCCGTGTCGGCCGCAGCAGCAACAGAAGTCTATCCT
CCCTCGAGCCCGGCCACACATCTCTCTTCCCTTCCTGTCCCCCTGCAAGC
GTCCCTCCGCGGGTTTCCTGCCCTCGAAGTCACCCGTCCCGTCGCCCATG
CCTCCTTGGCTCTTCGCACCCAAAAAGAAGCAGAAAACAGATTAGTCACT
AGTCTAGTCGGGCACCTGCATTGCTTGTGGTTAAAGGTGGAAAGTAATGA
AGACACGCTCTCTAATCCTGTACTGCATGTACGGAGCGACCCTCCTGCGC
GGTCTTCACAATTGGAGGACGCGTTCTTTTTTGAGAACAACAGCAATAGC
AGCATCAGTAGACGTGGACCCACTCCTTTAAAGTTGGGCAAAGACATGCA
GCCTGAGGCTGCCTTACCCGTACTCCTACCTTTGGCCCCTCTCTCGTCGT
CTTCTACTACAGATGCTGCTGTGTTATCACCCCAGAGTAGCGTGCTGGTG
CCTGTGTGGGTGCGCCCCAAGCAGGAAGGAAGGGTGAAGATCAACATCGT
ACTTGTGTACCATGCTACTGCTTCTGCTGCTGTCGGCGAGACGGACAGGA
GGGAAGACATTTATTCAAATCGGCTGGTATCGTATGAGTATGTCTTTGAC
CTTGAGAGCTATGCCCCCTTCGTGACTGCTTTTGATGTTGCCAGCCCATG
TCCTGCCCTCCCCCCCGCTCCTAGCAGCAAGATCGCGCGTGCCCTCCAAG
GAGACACAGACGATAAGAGCACTGCTGATGCTGGTGCTGCTGCCGCTCAT
ATATTCTATACTGGGGAGCAAGTTATGATGCGGCTCTCAATCAAGGCGTT
GCACCCTTCGTCGTGGGGGGAGAGTCAGGGGGGAGGGCGACCGCGGATCG
AGCAGGTAGTATGGCATCCTGTAGAAAGCGGGAATTGGGCTCCTGACAAA
GTAGCGGCAATCAGCGATAAGAGGAAAGAGAAAAGGAATGAGAATGGAGA
GGGGCGTGTATTGTATTCCTTTGCGCAGGATAGGCATGGGAGAAGGGGAG
GGGGAGAGCATGATGAAAGGGGGATGCAGCCTCACGATGTGCTCACTTTG
ACGTTTCCGTTTTTGTGCCCTGAGACGGAGAGTAGTCAGGCATTATCTTT
GGGCCACATGCGACTGTACTGGCGCGTTGTGTCTACCTCCTCTTCTTCGT
TTCCCTCTTCCTCCTTTTCGGAGAAGCCCACTGCTGCTACTACTGCATCC
CCCTCCTCCTCTTCCTGGCTTGCGTGCACTGAGGCCGAATGTCCCATCGT
AGGGGTGGTTGCACCCGATATAATTGTCCACTTACATGCGCCTTCAGATG
TTATGCTCGGGCAGGCATTCAAGTTGCGCTGGACTTTGAGGAATCTAACC
GAGAAAGTGTTGACTATACGTGTGGTTCTCAAGGAAGGGGGGGGGGGGAA
TTCGGGTCCCTCCACGGAAGAGGCGTTGGTGTGGAGTGGGGCGAGGGAGA
GCGTGGTGCAGATTTTACCACACGAATCGATACATTTGCGGTATCGTGTT
GTGGCGGTGCTTACGGGGCCCATAGCCTTGCCTCGGTTGGTTTTGACGCA
GATGCCCGACGCTGCTGCTGTTAGCAGTAGCAAGAAGGAAGAGGGAGGGA
CCTCTTTGCCTCTCCGGGTGGCTTACCGATACGTAGATAATGTTTTGTCA
AACTCCACGTTATCTCTCTCCACGCCCCGCAGTGCTGAGAATCGTGGGAG
TGTTGTTGGGGGCCAGCCCTCTGATACACGACACCTATTTGTGATTCCTG
AGGCGGCGCTTAACCAATAGATGGGGAGAGCATGTAAATTTAAGGACAGA
ATCAATGAGAAACCAGTAAATGCCAAAGGAAATGATCAAAGCACCCTTGG
AAAAGGCACCCAAAAACGCTTTAGACTCGTTTCCTTTTTTAAAACGGCAC
ACACATTTTCCGTATAAAAAAATA

protein sequence of jgi.p|Nanoce1779_2|584712

>mRNA_3146-protein ID=mRNA_3146-protein|Name=jgi.p|Nanoce1779_2|584712|organism=Nannochloropsis oceanica|type=polypeptide|length=1637bp
MLDSVLPEEVWKEAQPVLSIQGEVDWEPHIHDVFIRALHTVSLDKGSSIS
GPLGSTLTSGGLSSMAATISTPNKTPGLNGIVNVPFRFLSLAKTVVFPPK
KPTHPLKAADGRPLEGYTVGGLVKQNWIKKHVSQLPSAAILLAPFDNSWS
AAEWGRRELVLWQDMERLRQQVGPRDVRIFVVLIRRAGLPSGMSVGDAAE
DARESEERLVAFRRRTPPVFEAGKMVYVLQYPQDLQPSAPGLRRMYKHVR
DLSSGYYFLHGKRVKRWESALNRHAQLPLIVRYRFKQAFWYEFMGHAEKA
LKHFRKTFDALIELQAGWSNLNPSTFTEGPVVRGGAPALGLTTSTSPSAS
QASALQSSNAHVLGGWVSQIKAVAEVVAFKICYYSMREARHGEALRQFRL
LMSTWGWKKQQRVGRAVDGDAGTGRPLITMMPSSSFSSSFSSSSTSTSSP
LDGSCSGGLDTTPRGAAGAPSAAPPTEYNRLDFLSYKWTARQNQIFGDLL
QLFPCFPSPPSSISNSSSNSSSATAAATIMTYMDPDHYFFNAALEIAKQR
EMGLFLQANPRPESKLMVRFESHMGSGAGPLLGLPLYMGGRPRLVDSNIE
NGIGEGDICDLVQLILEREEAAGGEVRREEVLRLLVAAVSVYDPSRPRRP
RFKGMQHVRLADELMEAGREREAWGHYCTALKRYERYEKLGLEGGGCGGS
VGWSLPTVVMLGRMRVCALRLGGVEKNLGQYLDLTLKLLSQDLRGMVGEE
TRKLFWEEVLFLVFGIQREERGQQQQQASSLWSSIFTFHEQQQRQPPTNF
TSSVSKLGPVTYDDSGEETASSVSTSLEPMLTLLTDTVQVDLNCGWRQLV
SFSLCFPDATAAMGCSCLVLLRVVSHLPLPLHVSEMLLRFNKPYIGAVRI
VEASSLPASTASALDRIKQSFTAAPALVAPPLQPAVKVDDQNTAHVTLSL
LLQPDKPLDIPHTLSLPMGEAVEVGDLLHAVQLQLLINAPNSTSPSFSSL
FSPFPPLRRSLCLNLPSGVAYTDGLGVTRANVFKGPVSAAAATEVYPPSS
PATHLSSLPVPLQASLRGFPALEVTRPVAHASLALRTQKEAENRLVTSLV
GHLHCLWLKVESNEDTLSNPVLHVRSDPPARSSQLEDAFFFENNSNSSIS
RRGPTPLKLGKDMQPEAALPVLLPLAPLSSSSTTDAAVLSPQSSVLVPVW
VRPKQEGRVKINIVLVYHATASAAVGETDRREDIYSNRLVSYEYVFDLES
YAPFVTAFDVASPCPALPPAPSSKIARALQGDTDDKSTADAGAAAAHIFY
TGEQVMMRLSIKALHPSSWGESQGGGRPRIEQVVWHPVESGNWAPDKVAA
ISDKRKEKRNENGEGRVLYSFAQDRHGRRGGGEHDERGMQPHDVLTLTFP
FLCPETESSQALSLGHMRLYWRVVSTSSSSFPSSSFSEKPTAATTASPSS
SSWLACTEAECPIVGVVAPDIIVHLHAPSDVMLGQAFKLRWTLRNLTEKV
LTIRVVLKEGGGGNSGPSTEEALVWSGARESVVQILPHESIHLRYRVVAV
LTGPIALPRLVLTQMPDAAAVSSSKKEEGGTSLPLRVAYRYVDNVLSNST
LSLSTPRSAENRGSVVGGQPSDTRHLFVIPEAALNQ*

mRNA from alignment at scaffold_7:769286..774359+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_3146 ID=mRNA_3146|Name=jgi.p|Nanoce1779_2|584712|organism=Nannochloropsis oceanica|type=mRNA|length=5074bp|location=Sequence derived from alignment at scaffold_7:769286..774359+ (Nannochloropsis oceanica)
ACAGCTAAGATGTTGGACAGTGTCTTGCCCGAGGAGGTATGGAAAGAGGC
TCAACCTGTGCTCTCCATCCAGGGTGAGGTGGACTGGGAACCCCACATCC
ACGACGTCTTCATCCGTGCCCTCCACACCGTAAGCCTCGACAAGGGAAGC
AGCATCAGCGGCCCCTTGGGCAGCACCCTGACGAGCGGTGGCCTCAGCAG
CATGGCAGCGACAATTTCAACTCCAAATAAAACTCCGGGCCTTAATGGCA
TTGTCAACGTGCCCTTTCGTTTTCTGAGTCTGGCCAAAACAGTCGTCTTT
CCCCCAAAGAAACCTACCCATCCCCTCAAGGCTGCGGACGGTCGCCCCCT
GGAGGGCTACACGGTGGGAGGCCTGGTCAAGCAGAATTGGATCAAGAAAC
ACGTGTCACAATTACCCTCCGCTGCCATCTTGCTTGCCCCATTTGACAAC
AGTTGGTCAGCGGCGGAGTGGGGGCGGAGAGAGTTGGTGCTGTGGCAGGA
CATGGAACGCTTGAGGCAACAAGTCGGCCCACGCGATGTCCGCATTTTTG
TGGTGTTGATAAGGAGGGCGGGACTGCCTAGCGGCATGAGCGTTGGGGAT
GCAGCGGAGGATGCAAGGGAGAGCGAGGAAAGGTTGGTGGCTTTCAGGCG
ACGGACGCCTCCGGTGTTTGAGGCGGGGAAGATGGTGTACGTCCTGCAAT
ACCCCCAGGATCTGCAACCTTCCGCACCGGGCCTCAGAAGGATGTATAAG
CATGTAAGGGATTTATCATCGGGCTACTATTTTTTGCATGGGAAGCGAGT
GAAACGCTGGGAGAGTGCCTTGAACAGACATGCGCAGCTGCCGCTGATTG
TGAGGTATCGCTTCAAACAAGCCTTTTGGTACGAATTTATGGGGCACGCC
GAGAAGGCTCTCAAACACTTCAGAAAAACATTTGATGCACTAATAGAGCT
ACAAGCAGGGTGGTCTAACTTGAATCCATCTACATTTACTGAAGGACCGG
TGGTGCGAGGGGGAGCGCCTGCTCTAGGGTTGACTACGTCGACGTCCCCC
TCAGCTTCCCAGGCGAGTGCGCTTCAATCGAGCAATGCGCATGTGTTGGG
GGGCTGGGTATCGCAGATTAAGGCGGTGGCGGAGGTGGTGGCGTTTAAGA
TTTGTTACTACTCGATGAGGGAGGCGAGGCATGGAGAGGCCTTGAGGCAG
TTCCGGTTGTTGATGTCCACATGGGGGTGGAAGAAGCAGCAGAGGGTAGG
GAGAGCTGTCGATGGCGATGCTGGAACAGGCAGACCCTTGATAACGATGA
TGCCTTCTTCGTCGTTCTCGTCGTCGTTCTCTTCCTCCTCTACGTCGACT
TCTTCGCCACTGGATGGGAGTTGTAGCGGGGGGCTTGACACCACGCCACG
AGGAGCAGCAGGAGCTCCTTCAGCAGCACCACCCACAGAATACAACCGTC
TTGACTTTCTCTCCTACAAATGGACCGCACGGCAAAATCAAATTTTTGGC
GATCTTCTCCAACTATTTCCGTGCTTTCCCTCCCCCCCTTCCAGCATCAG
CAACAGCAGCAGCAACAGCAGTAGCGCAACAGCAGCAGCTACAATAATGA
CGTATATGGACCCGGACCACTATTTCTTTAATGCTGCGCTCGAGATAGCA
AAACAAAGGGAAATGGGTCTTTTCCTACAGGCAAATCCACGGCCGGAGAG
TAAATTAATGGTCAGGTTCGAGTCGCACATGGGCTCAGGGGCGGGGCCAT
TATTGGGGTTGCCTTTGTATATGGGTGGGAGGCCGAGGTTGGTCGATTCG
AACATAGAAAATGGAATCGGGGAAGGAGATATTTGTGACTTAGTACAATT
GATTTTAGAGAGGGAAGAGGCGGCGGGCGGGGAGGTGCGGAGGGAAGAGG
TGTTGCGCTTGTTGGTGGCGGCTGTAAGTGTGTATGATCCGTCGAGACCG
AGGAGGCCACGGTTTAAGGGAATGCAGCATGTGAGGCTGGCGGACGAATT
GATGGAGGCGGGGAGGGAGAGAGAGGCTTGGGGGCATTATTGCACAGCGT
TGAAGAGGTATGAGAGGTATGAGAAATTAGGGCTGGAGGGAGGAGGATGT
GGAGGGAGTGTGGGATGGAGTTTGCCGACGGTGGTGATGTTGGGGAGGAT
GAGGGTGTGCGCGTTGAGGCTGGGAGGGGTCGAAAAGAATTTGGGACAAT
ACCTTGATTTGACTCTGAAGCTGTTGAGTCAGGATTTGCGTGGGATGGTG
GGGGAGGAGACTCGAAAGCTATTTTGGGAGGAGGTGCTCTTCTTGGTGTT
TGGGATCCAGCGGGAAGAGAGGGGGCAGCAGCAGCAGCAAGCCTCCTCGT
TATGGTCATCGATTTTCACCTTCCACGAGCAACAGCAGCGACAGCCCCCT
ACTAATTTTACCTCGTCCGTATCGAAGCTTGGACCCGTTACTTACGACGA
CAGTGGGGAAGAGACCGCCTCCTCCGTTTCCACCTCCCTGGAGCCAATGC
TCACTCTTCTGACCGACACGGTGCAAGTGGACTTGAACTGCGGCTGGCGA
CAGCTGGTTTCCTTCTCCTTGTGCTTTCCCGATGCTACTGCTGCAATGGG
GTGTTCTTGTCTTGTGCTCCTGCGGGTTGTCTCCCATTTACCCTTGCCCT
TGCATGTGAGTGAGATGCTGCTTCGTTTTAACAAACCTTACATTGGCGCC
GTTCGGATTGTGGAGGCGTCCTCCCTCCCTGCCTCAACCGCCTCGGCCTT
GGATAGGATTAAACAATCATTTACCGCCGCGCCTGCTCTTGTTGCTCCTC
CTCTTCAACCAGCAGTAAAAGTTGATGACCAGAACACTGCTCACGTGACG
CTTTCCCTGTTGCTGCAGCCCGACAAACCCCTCGACATCCCCCACACCCT
CTCCCTCCCCATGGGCGAGGCCGTCGAAGTAGGCGACCTGCTCCACGCCG
TGCAACTTCAACTTCTGATCAACGCCCCCAACTCAACCTCCCCCTCCTTC
TCCTCCCTTTTTTCACCTTTTCCTCCTTTGCGTCGCTCTCTCTGTCTGAA
TCTCCCATCGGGGGTCGCCTACACAGATGGCCTCGGTGTTACGAGAGCCA
ACGTCTTCAAAGGCCCCGTGTCGGCCGCAGCAGCAACAGAAGTCTATCCT
CCCTCGAGCCCGGCCACACATCTCTCTTCCCTTCCTGTCCCCCTGCAAGC
GTCCCTCCGCGGGTTTCCTGCCCTCGAAGTCACCCGTCCCGTCGCCCATG
CCTCCTTGGCTCTTCGCACCCAAAAAGAAGCAGAAAACAGATTAGTCACT
AGTCTAGTCGGGCACCTGCATTGCTTGTGGTTAAAGGTGGAAAGTAATGA
AGACACGCTCTCTAATCCTGTACTGCATGTACGGAGCGACCCTCCTGCGC
GGTCTTCACAATTGGAGGACGCGTTCTTTTTTGAGAACAACAGCAATAGC
AGCATCAGTAGACGTGGACCCACTCCTTTAAAGTTGGGCAAAGACATGCA
GCCTGAGGCTGCCTTACCCGTACTCCTACCTTTGGCCCCTCTCTCGTCGT
CTTCTACTACAGATGCTGCTGTGTTATCACCCCAGAGTAGCGTGCTGGTG
CCTGTGTGGGTGCGCCCCAAGCAGGAAGGAAGGGTGAAGATCAACATCGT
ACTTGTGTACCATGCTACTGCTTCTGCTGCTGTCGGCGAGACGGACAGGA
GGGAAGACATTTATTCAAATCGGCTGGTATCGTATGAGTATGTCTTTGAC
CTTGAGAGCTATGCCCCCTTCGTGACTGCTTTTGATGTTGCCAGCCCATG
TCCTGCCCTCCCCCCCGCTCCTAGCAGCAAGATCGCGCGTGCCCTCCAAG
GAGACACAGACGATAAGAGCACTGCTGATGCTGGTGCTGCTGCCGCTCAT
ATATTCTATACTGGGGAGCAAGTTATGATGCGGCTCTCAATCAAGGCGTT
GCACCCTTCGTCGTGGGGGGAGAGTCAGGGGGGAGGGCGACCGCGGATCG
AGCAGGTAGTATGGCATCCTGTAGAAAGCGGGAATTGGGCTCCTGACAAA
GTAGCGGCAATCAGCGATAAGAGGAAAGAGAAAAGGAATGAGAATGGAGA
GGGGCGTGTATTGTATTCCTTTGCGCAGGATAGGCATGGGAGAAGGGGAG
GGGGAGAGCATGATGAAAGGGGGATGCAGCCTCACGATGTGCTCACTTTG
ACGTTTCCGTTTTTGTGCCCTGAGACGGAGAGTAGTCAGGCATTATCTTT
GGGCCACATGCGACTGTACTGGCGCGTTGTGTCTACCTCCTCTTCTTCGT
TTCCCTCTTCCTCCTTTTCGGAGAAGCCCACTGCTGCTACTACTGCATCC
CCCTCCTCCTCTTCCTGGCTTGCGTGCACTGAGGCCGAATGTCCCATCGT
AGGGGTGGTTGCACCCGATATAATTGTCCACTTACATGCGCCTTCAGATG
TTATGCTCGGGCAGGCATTCAAGTTGCGCTGGACTTTGAGGAATCTAACC
GAGAAAGTGTTGACTATACGTGTGGTTCTCAAGGAAGGGGGGGGGGGGAA
TTCGGGTCCCTCCACGGAAGAGGCGTTGGTGTGGAGTGGGGCGAGGGAGA
GCGTGGTGCAGATTTTACCACACGAATCGATACATTTGCGGTATCGTGTT
GTGGCGGTGCTTACGGGGCCCATAGCCTTGCCTCGGTTGGTTTTGACGCA
GATGCCCGACGCTGCTGCTGTTAGCAGTAGCAAGAAGGAAGAGGGAGGGA
CCTCTTTGCCTCTCCGGGTGGCTTACCGATACGTAGATAATGTTTTGTCA
AACTCCACGTTATCTCTCTCCACGCCCCGCAGTGCTGAGAATCGTGGGAG
TGTTGTTGGGGGCCAGCCCTCTGATACACGACACCTATTTGTGATTCCTG
AGGCGGCGCTTAACCAATAGATGGGGAGAGCATGTAAATTTAAGGACAGA
ATCAATGAGAAACCAGTAAATGCCAAAGGAAATGATCAAAGCACCCTTGG
AAAAGGCACCCAAAAACGCTTTAGACTCGTTTCCTTTTTTAAAACGGCAC
ACACATTTTCCGTATAAAAAAATA

Coding sequence (CDS) from alignment at scaffold_7:769286..774359+

>mRNA_3146 ID=mRNA_3146|Name=jgi.p|Nanoce1779_2|584712|organism=Nannochloropsis oceanica|type=CDS|length=4911bp|location=Sequence derived from alignment at scaffold_7:769286..774359+ (Nannochloropsis oceanica)
ATGTTGGACAGTGTCTTGCCCGAGGAGGTATGGAAAGAGGCTCAACCTGT
GCTCTCCATCCAGGGTGAGGTGGACTGGGAACCCCACATCCACGACGTCT
TCATCCGTGCCCTCCACACCGTAAGCCTCGACAAGGGAAGCAGCATCAGC
GGCCCCTTGGGCAGCACCCTGACGAGCGGTGGCCTCAGCAGCATGGCAGC
GACAATTTCAACTCCAAATAAAACTCCGGGCCTTAATGGCATTGTCAACG
TGCCCTTTCGTTTTCTGAGTCTGGCCAAAACAGTCGTCTTTCCCCCAAAG
AAACCTACCCATCCCCTCAAGGCTGCGGACGGTCGCCCCCTGGAGGGCTA
CACGGTGGGAGGCCTGGTCAAGCAGAATTGGATCAAGAAACACGTGTCAC
AATTACCCTCCGCTGCCATCTTGCTTGCCCCATTTGACAACAGTTGGTCA
GCGGCGGAGTGGGGGCGGAGAGAGTTGGTGCTGTGGCAGGACATGGAACG
CTTGAGGCAACAAGTCGGCCCACGCGATGTCCGCATTTTTGTGGTGTTGA
TAAGGAGGGCGGGACTGCCTAGCGGCATGAGCGTTGGGGATGCAGCGGAG
GATGCAAGGGAGAGCGAGGAAAGGTTGGTGGCTTTCAGGCGACGGACGCC
TCCGGTGTTTGAGGCGGGGAAGATGGTGTACGTCCTGCAATACCCCCAGG
ATCTGCAACCTTCCGCACCGGGCCTCAGAAGGATGTATAAGCATGTAAGG
GATTTATCATCGGGCTACTATTTTTTGCATGGGAAGCGAGTGAAACGCTG
GGAGAGTGCCTTGAACAGACATGCGCAGCTGCCGCTGATTGTGAGGTATC
GCTTCAAACAAGCCTTTTGGTACGAATTTATGGGGCACGCCGAGAAGGCT
CTCAAACACTTCAGAAAAACATTTGATGCACTAATAGAGCTACAAGCAGG
GTGGTCTAACTTGAATCCATCTACATTTACTGAAGGACCGGTGGTGCGAG
GGGGAGCGCCTGCTCTAGGGTTGACTACGTCGACGTCCCCCTCAGCTTCC
CAGGCGAGTGCGCTTCAATCGAGCAATGCGCATGTGTTGGGGGGCTGGGT
ATCGCAGATTAAGGCGGTGGCGGAGGTGGTGGCGTTTAAGATTTGTTACT
ACTCGATGAGGGAGGCGAGGCATGGAGAGGCCTTGAGGCAGTTCCGGTTG
TTGATGTCCACATGGGGGTGGAAGAAGCAGCAGAGGGTAGGGAGAGCTGT
CGATGGCGATGCTGGAACAGGCAGACCCTTGATAACGATGATGCCTTCTT
CGTCGTTCTCGTCGTCGTTCTCTTCCTCCTCTACGTCGACTTCTTCGCCA
CTGGATGGGAGTTGTAGCGGGGGGCTTGACACCACGCCACGAGGAGCAGC
AGGAGCTCCTTCAGCAGCACCACCCACAGAATACAACCGTCTTGACTTTC
TCTCCTACAAATGGACCGCACGGCAAAATCAAATTTTTGGCGATCTTCTC
CAACTATTTCCGTGCTTTCCCTCCCCCCCTTCCAGCATCAGCAACAGCAG
CAGCAACAGCAGTAGCGCAACAGCAGCAGCTACAATAATGACGTATATGG
ACCCGGACCACTATTTCTTTAATGCTGCGCTCGAGATAGCAAAACAAAGG
GAAATGGGTCTTTTCCTACAGGCAAATCCACGGCCGGAGAGTAAATTAAT
GGTCAGGTTCGAGTCGCACATGGGCTCAGGGGCGGGGCCATTATTGGGGT
TGCCTTTGTATATGGGTGGGAGGCCGAGGTTGGTCGATTCGAACATAGAA
AATGGAATCGGGGAAGGAGATATTTGTGACTTAGTACAATTGATTTTAGA
GAGGGAAGAGGCGGCGGGCGGGGAGGTGCGGAGGGAAGAGGTGTTGCGCT
TGTTGGTGGCGGCTGTAAGTGTGTATGATCCGTCGAGACCGAGGAGGCCA
CGGTTTAAGGGAATGCAGCATGTGAGGCTGGCGGACGAATTGATGGAGGC
GGGGAGGGAGAGAGAGGCTTGGGGGCATTATTGCACAGCGTTGAAGAGGT
ATGAGAGGTATGAGAAATTAGGGCTGGAGGGAGGAGGATGTGGAGGGAGT
GTGGGATGGAGTTTGCCGACGGTGGTGATGTTGGGGAGGATGAGGGTGTG
CGCGTTGAGGCTGGGAGGGGTCGAAAAGAATTTGGGACAATACCTTGATT
TGACTCTGAAGCTGTTGAGTCAGGATTTGCGTGGGATGGTGGGGGAGGAG
ACTCGAAAGCTATTTTGGGAGGAGGTGCTCTTCTTGGTGTTTGGGATCCA
GCGGGAAGAGAGGGGGCAGCAGCAGCAGCAAGCCTCCTCGTTATGGTCAT
CGATTTTCACCTTCCACGAGCAACAGCAGCGACAGCCCCCTACTAATTTT
ACCTCGTCCGTATCGAAGCTTGGACCCGTTACTTACGACGACAGTGGGGA
AGAGACCGCCTCCTCCGTTTCCACCTCCCTGGAGCCAATGCTCACTCTTC
TGACCGACACGGTGCAAGTGGACTTGAACTGCGGCTGGCGACAGCTGGTT
TCCTTCTCCTTGTGCTTTCCCGATGCTACTGCTGCAATGGGGTGTTCTTG
TCTTGTGCTCCTGCGGGTTGTCTCCCATTTACCCTTGCCCTTGCATGTGA
GTGAGATGCTGCTTCGTTTTAACAAACCTTACATTGGCGCCGTTCGGATT
GTGGAGGCGTCCTCCCTCCCTGCCTCAACCGCCTCGGCCTTGGATAGGAT
TAAACAATCATTTACCGCCGCGCCTGCTCTTGTTGCTCCTCCTCTTCAAC
CAGCAGTAAAAGTTGATGACCAGAACACTGCTCACGTGACGCTTTCCCTG
TTGCTGCAGCCCGACAAACCCCTCGACATCCCCCACACCCTCTCCCTCCC
CATGGGCGAGGCCGTCGAAGTAGGCGACCTGCTCCACGCCGTGCAACTTC
AACTTCTGATCAACGCCCCCAACTCAACCTCCCCCTCCTTCTCCTCCCTT
TTTTCACCTTTTCCTCCTTTGCGTCGCTCTCTCTGTCTGAATCTCCCATC
GGGGGTCGCCTACACAGATGGCCTCGGTGTTACGAGAGCCAACGTCTTCA
AAGGCCCCGTGTCGGCCGCAGCAGCAACAGAAGTCTATCCTCCCTCGAGC
CCGGCCACACATCTCTCTTCCCTTCCTGTCCCCCTGCAAGCGTCCCTCCG
CGGGTTTCCTGCCCTCGAAGTCACCCGTCCCGTCGCCCATGCCTCCTTGG
CTCTTCGCACCCAAAAAGAAGCAGAAAACAGATTAGTCACTAGTCTAGTC
GGGCACCTGCATTGCTTGTGGTTAAAGGTGGAAAGTAATGAAGACACGCT
CTCTAATCCTGTACTGCATGTACGGAGCGACCCTCCTGCGCGGTCTTCAC
AATTGGAGGACGCGTTCTTTTTTGAGAACAACAGCAATAGCAGCATCAGT
AGACGTGGACCCACTCCTTTAAAGTTGGGCAAAGACATGCAGCCTGAGGC
TGCCTTACCCGTACTCCTACCTTTGGCCCCTCTCTCGTCGTCTTCTACTA
CAGATGCTGCTGTGTTATCACCCCAGAGTAGCGTGCTGGTGCCTGTGTGG
GTGCGCCCCAAGCAGGAAGGAAGGGTGAAGATCAACATCGTACTTGTGTA
CCATGCTACTGCTTCTGCTGCTGTCGGCGAGACGGACAGGAGGGAAGACA
TTTATTCAAATCGGCTGGTATCGTATGAGTATGTCTTTGACCTTGAGAGC
TATGCCCCCTTCGTGACTGCTTTTGATGTTGCCAGCCCATGTCCTGCCCT
CCCCCCCGCTCCTAGCAGCAAGATCGCGCGTGCCCTCCAAGGAGACACAG
ACGATAAGAGCACTGCTGATGCTGGTGCTGCTGCCGCTCATATATTCTAT
ACTGGGGAGCAAGTTATGATGCGGCTCTCAATCAAGGCGTTGCACCCTTC
GTCGTGGGGGGAGAGTCAGGGGGGAGGGCGACCGCGGATCGAGCAGGTAG
TATGGCATCCTGTAGAAAGCGGGAATTGGGCTCCTGACAAAGTAGCGGCA
ATCAGCGATAAGAGGAAAGAGAAAAGGAATGAGAATGGAGAGGGGCGTGT
ATTGTATTCCTTTGCGCAGGATAGGCATGGGAGAAGGGGAGGGGGAGAGC
ATGATGAAAGGGGGATGCAGCCTCACGATGTGCTCACTTTGACGTTTCCG
TTTTTGTGCCCTGAGACGGAGAGTAGTCAGGCATTATCTTTGGGCCACAT
GCGACTGTACTGGCGCGTTGTGTCTACCTCCTCTTCTTCGTTTCCCTCTT
CCTCCTTTTCGGAGAAGCCCACTGCTGCTACTACTGCATCCCCCTCCTCC
TCTTCCTGGCTTGCGTGCACTGAGGCCGAATGTCCCATCGTAGGGGTGGT
TGCACCCGATATAATTGTCCACTTACATGCGCCTTCAGATGTTATGCTCG
GGCAGGCATTCAAGTTGCGCTGGACTTTGAGGAATCTAACCGAGAAAGTG
TTGACTATACGTGTGGTTCTCAAGGAAGGGGGGGGGGGGAATTCGGGTCC
CTCCACGGAAGAGGCGTTGGTGTGGAGTGGGGCGAGGGAGAGCGTGGTGC
AGATTTTACCACACGAATCGATACATTTGCGGTATCGTGTTGTGGCGGTG
CTTACGGGGCCCATAGCCTTGCCTCGGTTGGTTTTGACGCAGATGCCCGA
CGCTGCTGCTGTTAGCAGTAGCAAGAAGGAAGAGGGAGGGACCTCTTTGC
CTCTCCGGGTGGCTTACCGATACGTAGATAATGTTTTGTCAAACTCCACG
TTATCTCTCTCCACGCCCCGCAGTGCTGAGAATCGTGGGAGTGTTGTTGG
GGGCCAGCCCTCTGATACACGACACCTATTTGTGATTCCTGAGGCGGCGC
TTAACCAATAG

Synonyms

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