Properties
| Property Name | Value |
|---|
| TranscriptId | 526191 |
| Track | FilteredModels2 |
| ProteinId | 526105 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_7 | supercontig | scaffold_7:346147..348161 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2959 ID=mRNA_2959|Name=jgi.p|Nanoce1779_2|526105|organism=Nannochloropsis oceanica|type=mRNA|length=1764bp
ATGAAGGCCGCCTCTTGGTCTTCCTTGTCCGCCAACTACGACTATGTCAT
TGTTGGTGGAGGCAGTGCCGGCTGCGTGCTCGCAAATCGTCTCTCGGTCA
ATCCACGCGTCAAAGTCCTGCTACTCGAAGCGGGTGGGGATGACCGCTTC
ATCCCATTTGTCCATGTGCCGGTGGGATACCTGTGGAGCATCGCCAACCC
CAAGGTCGACTGGTGCTTGAAAACGGAGCCCGTCCCAGGCCTGCATGGCC
GCACGTTAGCCTACCCGAGGGGCAAGGTCTTAGGTGGCTGCTCTTCAATT
AATGGCATGATATATATGCGTGGACAAGCGGAGGATTACGACGGATGGGC
AGGGGAGATTGGGGAGGGAGGGAGGGAGGGGGGGGAAAAGGAGGATTTTG
GAAAGGCCTGGTCCTGGAAGGAGGTGTTGCCATACTTTGTCAAGTCGGAG
GATTACGCCGTTAAGGGCGCAAAAGACGAAATGTGTGGTGATGTCTCCAC
TACTGCTGCTGCTGCCGCAACAGGGGTTGTGCATGGTGTAGGAGGGGAGT
GGCGGGTGGAGAGACAAAGGTTGAGTTGGGAGTTGCTTGATAAATTTCGT
GATGCCTGTGCCGAGCACGGCATTCCGAAGGTGACTGATTTCAATAAAGG
GTTCAATGAGGGCTCAAGCTATTTTCACGTGAATCAGTGGAACGGGATCA
GATGGAACACGAGCAAGGCCTGGCTCCACCCTATTACTACGCACCGGCCC
AATCTCACTGTTCGTACCGGCGTGCATGTCCTCAAAGTCATCTTGGATCC
CGCCGGGACTACTGCGCTCGGCGTCGAATTCGCACATTTTACCAGCAGCA
CGGTCATAGAGAAGGCATATGCAGGGCTGGAGACTATATTAGCCGCAGGG
GCGGTTGGCAGCCCTCATTTACTCCAACTGAGCGGGATCGGCCCTGTGGA
CGCTCTGAGGGCTGTGGGCGTGCCCGTTCTACACCCCCTCCCTGGTGTCG
GCGCAAACTTACAAGACCATCTACAGCTACGCACGGTGTTCACGGTCAAG
AACGTCGAAACGCTAAACGAACAATACGCCCGATGGTGGGGTCGTGTCAA
AATGGGATGGGCCTACCTCCGGCACCGTCGAGGCCCCCTAAGCATGGCTC
CCTCCCAAGTGGGCGTCTTTTGCAAGAGCGACAATACCCAATCTCGAGCC
AACCTCCAATATCACGTCCAGCCCCTCTCACTCGATAAGTTTGGGGAGCC
TTTGCATGCTTTCCCTGCCTTTACTGCGTCCGTCTGTCATCTCCGTCCGA
GCTCCCGTGGCCACATCCTTTTGCGTGACTCCGATCCTCGATCCCCTCCC
TTGATCCAGCCAAATTATTTGTCGACGTCAGAAGATAGGGCGATCGCCGC
TGACGCTATCAGATTAACGAGAAGGTTAGTTTTGGAGTCCAAAGCTCTAG
CACCCTTTTCACCACAAGAATATATCCCGGGCTCTCGGTACGCAAGTCAG
GAAGAGCTGGAGGCAGCAGCGGGGAGGGTTGGAACGACGATTTTCCACCC
GGCGGGGACATGCAAAATGGGGCGGGGAGATAATGCAATGGCGGTCCTGG
ATGGACGGATGAAGGTGAGGGGGGTGAGGAGGCTTAGAGTGTGCGACACC
AGTGTCATGCCGCGGATCACTAGTGGGAATACGAATAGCCCGACGGTGAT
GATTGCGGAGAAGGGGAGCGACTTTATCAATCAGGAGCATGGAACATGGG
GGGGTCAGGGGTAA back to topprotein sequence of jgi.p|Nanoce1779_2|526105 >mRNA_2959-protein ID=mRNA_2959-protein|Name=jgi.p|Nanoce1779_2|526105|organism=Nannochloropsis oceanica|type=polypeptide|length=588bp
MKAASWSSLSANYDYVIVGGGSAGCVLANRLSVNPRVKVLLLEAGGDDRF
IPFVHVPVGYLWSIANPKVDWCLKTEPVPGLHGRTLAYPRGKVLGGCSSI
NGMIYMRGQAEDYDGWAGEIGEGGREGGEKEDFGKAWSWKEVLPYFVKSE
DYAVKGAKDEMCGDVSTTAAAAATGVVHGVGGEWRVERQRLSWELLDKFR
DACAEHGIPKVTDFNKGFNEGSSYFHVNQWNGIRWNTSKAWLHPITTHRP
NLTVRTGVHVLKVILDPAGTTALGVEFAHFTSSTVIEKAYAGLETILAAG
AVGSPHLLQLSGIGPVDALRAVGVPVLHPLPGVGANLQDHLQLRTVFTVK
NVETLNEQYARWWGRVKMGWAYLRHRRGPLSMAPSQVGVFCKSDNTQSRA
NLQYHVQPLSLDKFGEPLHAFPAFTASVCHLRPSSRGHILLRDSDPRSPP
LIQPNYLSTSEDRAIAADAIRLTRRLVLESKALAPFSPQEYIPGSRYASQ
EELEAAAGRVGTTIFHPAGTCKMGRGDNAMAVLDGRMKVRGVRRLRVCDT
SVMPRITSGNTNSPTVMIAEKGSDFINQEHGTWGGQG* back to topmRNA from alignment at scaffold_7:346147..348161- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2959 ID=mRNA_2959|Name=jgi.p|Nanoce1779_2|526105|organism=Nannochloropsis oceanica|type=mRNA|length=2015bp|location=Sequence derived from alignment at scaffold_7:346147..348161- (Nannochloropsis oceanica)
ATGAAGGCCGCCTCTTGGTCTTCCTTGTCCGCCAACTACGACTATGTCAT
TGTTGGTGGAGGCAGTGCCGGCTGCGTGCTCGCAAATCGTCTCTCGGTCA
ATCCACGCGTCAAAGTCCTGCTACTCGAAGCGGGTGGGGATGACCGCTTC
ATCCCATTTGTCCATGTGCCGGTGGGATACCTGTGGAGGTGCGTATGCGG
CTCCTATGCCTTTTTCAGCCAACAAAGGCACGAGTTCATGGTCAATTTTC
ATTTCTTATTTCCGCTGAAAAACCCTTTCTTTTGTGTTCTCCTCCCTCCT
CCGCAGCATCGCCAACCCCAAGGTCGACTGGTGCTTGAAAACGGAGCCCG
TCCCAGGCCTGCATGGCCGCACGTTAGCCTACCCGAGGGGCAAGGTCTTA
GGTGGCTGCTCTTCAATTAATGGCATGATATATATGCGTGGACAAGCGGA
GGATTACGACGGATGGGCAGGGGAGATTGGGGAGGGAGGGAGGGAGGGGG
GGGAAAAGGAGGATTTTGGAAAGGCCTGGTCCTGGAAGGAGGTGTTGCCA
TACTTTGTCAAGTCGGAGGATTACGCCGTTAAGGGCGCAAAAGACGAAAT
GTGTGGTGATGTCTCCACTACTGCTGCTGCTGCCGCAACAGGGGTTGTGC
ATGGTGTAGGAGGGGAGTGGCGGGTGGAGAGACAAAGGTTGAGTTGGGAG
TTGCTTGATAAATTTCGTGATGCCTGTGCCGAGCACGGCATTCCGAAGGT
GACTGATTTCAATAAAGGGTTCAATGAGGGCTCAAGCTATTTTCACGTGA
ATCAGTGGAACGGGATCAGATGGAACACGAGCAAGGTACGAATGAAAAAC
GTGAGGGAAGGGGTAGGAAGGGAGGGAGGGAGGAAAGAATGGAGAAATAA
CGCCGGTCCATATTCCATTCACTTACTTTCCCGCATCCCCCCCCTTCTTC
CCTCCCTTTCTCCCCTAGGCCTGGCTCCACCCTATTACTACGCACCGGCC
CAATCTCACTGTTCGTACCGGCGTGCATGTCCTCAAAGTCATCTTGGATC
CCGCCGGGACTACTGCGCTCGGCGTCGAATTCGCACATTTTACCAGCAGC
ACGGTCATAGAGAAGGCATATGCAGGGCTGGAGACTATATTAGCCGCAGG
GGCGGTTGGCAGCCCTCATTTACTCCAACTGAGCGGGATCGGCCCTGTGG
ACGCTCTGAGGGCTGTGGGCGTGCCCGTTCTACACCCCCTCCCTGGTGTC
GGCGCAAACTTACAAGACCATCTACAGCTACGCACGGTGTTCACGGTCAA
GAACGTCGAAACGCTAAACGAACAATACGCCCGATGGTGGGGTCGTGTCA
AAATGGGATGGGCCTACCTCCGGCACCGTCGAGGCCCCCTAAGCATGGCT
CCCTCCCAAGTGGGCGTCTTTTGCAAGAGCGACAATACCCAATCTCGAGC
CAACCTCCAATATCACGTCCAGCCCCTCTCACTCGATAAGTTTGGGGAGC
CTTTGCATGCTTTCCCTGCCTTTACTGCGTCCGTCTGTCATCTCCGTCCG
AGCTCCCGTGGCCACATCCTTTTGCGTGACTCCGATCCTCGATCCCCTCC
CTTGATCCAGCCAAATTATTTGTCGACGTCAGAAGATAGGGCGATCGCCG
CTGACGCTATCAGATTAACGAGAAGGTTAGTTTTGGAGTCCAAAGCTCTA
GCACCCTTTTCACCACAAGAATATATCCCGGGCTCTCGGTACGCAAGTCA
GGAAGAGCTGGAGGCAGCAGCGGGGAGGGTTGGAACGACGATTTTCCACC
CGGCGGGGACATGCAAAATGGGGCGGGGAGATAATGCAATGGCGGTCCTG
GATGGACGGATGAAGGTGAGGGGGGTGAGGAGGCTTAGAGTGTGCGACAC
CAGTGTCATGCCGCGGATCACTAGTGGGAATACGAATAGCCCGACGGTGA
TGATTGCGGAGAAGGGGAGCGACTTTATCAATCAGGAGCATGGAACATGG
GGGGGTCAGGGGTAA back to topCoding sequence (CDS) from alignment at scaffold_7:346147..348161- >mRNA_2959 ID=mRNA_2959|Name=jgi.p|Nanoce1779_2|526105|organism=Nannochloropsis oceanica|type=CDS|length=5292bp|location=Sequence derived from alignment at scaffold_7:346147..348161- (Nannochloropsis oceanica)
GCCTGGCTCCACCCTATTACTACGCACCGGCCCAATCTCACTGTTCGTAC
CGGCGTGCATGTCCTCAAAGTCATCTTGGATCCCGCCGGGACTACTGCGC
TCGGCGTCGAATTCGCACATTTTACCAGCAGCACGGTCATAGAGAAGGCA
TATGCAGGGCTGGAGACTATATTAGCCGCAGGGGCGGTTGGCAGCCCTCA
TTTACTCCAACTGAGCGGGATCGGCCCTGTGGACGCTCTGAGGGCTGTGG
GCGTGCCCGTTCTACACCCCCTCCCTGGTGTCGGCGCAAACTTACAAGAC
CATCTACAGCTACGCACGGTGTTCACGGTCAAGAACGTCGAAACGCTAAA
CGAACAATACGCCCGATGGTGGGGTCGTGTCAAAATGGGATGGGCCTACC
TCCGGCACCGTCGAGGCCCCCTAAGCATGGCTCCCTCCCAAGTGGGCGTC
TTTTGCAAGAGCGACAATACCCAATCTCGAGCCAACCTCCAATATCACGT
CCAGCCCCTCTCACTCGATAAGTTTGGGGAGCCTTTGCATGCTTTCCCTG
CCTTTACTGCGTCCGTCTGTCATCTCCGTCCGAGCTCCCGTGGCCACATC
CTTTTGCGTGACTCCGATCCTCGATCCCCTCCCTTGATCCAGCCAAATTA
TTTGTCGACGTCAGAAGATAGGGCGATCGCCGCTGACGCTATCAGATTAA
CGAGAAGGTTAGTTTTGGAGTCCAAAGCTCTAGCACCCTTTTCACCACAA
GAATATATCCCGGGCTCTCGGTACGCAAGTCAGGAAGAGCTGGAGGCAGC
AGCGGGGAGGGTTGGAACGACGATTTTCCACCCGGCGGGGACATGCAAAA
TGGGGCGGGGAGATAATGCAATGGCGGTCCTGGATGGACGGATGAAGGTG
AGGGGGGTGAGGAGGCTTAGAGTGTGCGACACCAGTGTCATGCCGCGGAT
CACTAGTGGGAATACGAATAGCCCGACGGTGATGATTGCGGAGAAGGGGA
GCGACTTTATCAATCAGGAGCATGGAACATGGGGGGGTCAGGGGTAACAT
CGCCAACCCCAAGGTCGACTGGTGCTTGAAAACGGAGCCCGTCCCAGGCC
TGCATGGCCGCACGTTAGCCTACCCGAGGGGCAAGGTCTTAGGTGGCTGC
TCTTCAATTAATGGCATGATATATATGCGTGGACAAGCGGAGGATTACGA
CGGATGGGCAGGGGAGATTGGGGAGGGAGGGAGGGAGGGGGGGGAAAAGG
AGGATTTTGGAAAGGCCTGGTCCTGGAAGGAGGTGTTGCCATACTTTGTC
AAGTCGGAGGATTACGCCGTTAAGGGCGCAAAAGACGAAATGTGTGGTGA
TGTCTCCACTACTGCTGCTGCTGCCGCAACAGGGGTTGTGCATGGTGTAG
GAGGGGAGTGGCGGGTGGAGAGACAAAGGTTGAGTTGGGAGTTGCTTGAT
AAATTTCGTGATGCCTGTGCCGAGCACGGCATTCCGAAGGTGACTGATTT
CAATAAAGGGTTCAATGAGGGCTCAAGCTATTTTCACGTGAATCAGTGGA
ACGGGATCAGATGGAACACGAGCAAGATGAAGGCCGCCTCTTGGTCTTCC
TTGTCCGCCAACTACGACTATGTCATTGTTGGTGGAGGCAGTGCCGGCTG
CGTGCTCGCAAATCGTCTCTCGGTCAATCCACGCGTCAAAGTCCTGCTAC
TCGAAGCGGGTGGGGATGACCGCTTCATCCCATTTGTCCATGTGCCGGTG
GGATACCTGTGGAGGCCTGGCTCCACCCTATTACTACGCACCGGCCCAAT
CTCACTGTTCGTACCGGCGTGCATGTCCTCAAAGTCATCTTGGATCCCGC
CGGGACTACTGCGCTCGGCGTCGAATTCGCACATTTTACCAGCAGCACGG
TCATAGAGAAGGCATATGCAGGGCTGGAGACTATATTAGCCGCAGGGGCG
GTTGGCAGCCCTCATTTACTCCAACTGAGCGGGATCGGCCCTGTGGACGC
TCTGAGGGCTGTGGGCGTGCCCGTTCTACACCCCCTCCCTGGTGTCGGCG
CAAACTTACAAGACCATCTACAGCTACGCACGGTGTTCACGGTCAAGAAC
GTCGAAACGCTAAACGAACAATACGCCCGATGGTGGGGTCGTGTCAAAAT
GGGATGGGCCTACCTCCGGCACCGTCGAGGCCCCCTAAGCATGGCTCCCT
CCCAAGTGGGCGTCTTTTGCAAGAGCGACAATACCCAATCTCGAGCCAAC
CTCCAATATCACGTCCAGCCCCTCTCACTCGATAAGTTTGGGGAGCCTTT
GCATGCTTTCCCTGCCTTTACTGCGTCCGTCTGTCATCTCCGTCCGAGCT
CCCGTGGCCACATCCTTTTGCGTGACTCCGATCCTCGATCCCCTCCCTTG
ATCCAGCCAAATTATTTGTCGACGTCAGAAGATAGGGCGATCGCCGCTGA
CGCTATCAGATTAACGAGAAGGTTAGTTTTGGAGTCCAAAGCTCTAGCAC
CCTTTTCACCACAAGAATATATCCCGGGCTCTCGGTACGCAAGTCAGGAA
GAGCTGGAGGCAGCAGCGGGGAGGGTTGGAACGACGATTTTCCACCCGGC
GGGGACATGCAAAATGGGGCGGGGAGATAATGCAATGGCGGTCCTGGATG
GACGGATGAAGGTGAGGGGGGTGAGGAGGCTTAGAGTGTGCGACACCAGT
GTCATGCCGCGGATCACTAGTGGGAATACGAATAGCCCGACGGTGATGAT
TGCGGAGAAGGGGAGCGACTTTATCAATCAGGAGCATGGAACATGGGGGG
GTCAGGGGTAACATCGCCAACCCCAAGGTCGACTGGTGCTTGAAAACGGA
GCCCGTCCCAGGCCTGCATGGCCGCACGTTAGCCTACCCGAGGGGCAAGG
TCTTAGGTGGCTGCTCTTCAATTAATGGCATGATATATATGCGTGGACAA
GCGGAGGATTACGACGGATGGGCAGGGGAGATTGGGGAGGGAGGGAGGGA
GGGGGGGGAAAAGGAGGATTTTGGAAAGGCCTGGTCCTGGAAGGAGGTGT
TGCCATACTTTGTCAAGTCGGAGGATTACGCCGTTAAGGGCGCAAAAGAC
GAAATGTGTGGTGATGTCTCCACTACTGCTGCTGCTGCCGCAACAGGGGT
TGTGCATGGTGTAGGAGGGGAGTGGCGGGTGGAGAGACAAAGGTTGAGTT
GGGAGTTGCTTGATAAATTTCGTGATGCCTGTGCCGAGCACGGCATTCCG
AAGGTGACTGATTTCAATAAAGGGTTCAATGAGGGCTCAAGCTATTTTCA
CGTGAATCAGTGGAACGGGATCAGATGGAACACGAGCAAGATGAAGGCCG
CCTCTTGGTCTTCCTTGTCCGCCAACTACGACTATGTCATTGTTGGTGGA
GGCAGTGCCGGCTGCGTGCTCGCAAATCGTCTCTCGGTCAATCCACGCGT
CAAAGTCCTGCTACTCGAAGCGGGTGGGGATGACCGCTTCATCCCATTTG
TCCATGTGCCGGTGGGATACCTGTGGAGGCCTGGCTCCACCCTATTACTA
CGCACCGGCCCAATCTCACTGTTCGTACCGGCGTGCATGTCCTCAAAGTC
ATCTTGGATCCCGCCGGGACTACTGCGCTCGGCGTCGAATTCGCACATTT
TACCAGCAGCACGGTCATAGAGAAGGCATATGCAGGGCTGGAGACTATAT
TAGCCGCAGGGGCGGTTGGCAGCCCTCATTTACTCCAACTGAGCGGGATC
GGCCCTGTGGACGCTCTGAGGGCTGTGGGCGTGCCCGTTCTACACCCCCT
CCCTGGTGTCGGCGCAAACTTACAAGACCATCTACAGCTACGCACGGTGT
TCACGGTCAAGAACGTCGAAACGCTAAACGAACAATACGCCCGATGGTGG
GGTCGTGTCAAAATGGGATGGGCCTACCTCCGGCACCGTCGAGGCCCCCT
AAGCATGGCTCCCTCCCAAGTGGGCGTCTTTTGCAAGAGCGACAATACCC
AATCTCGAGCCAACCTCCAATATCACGTCCAGCCCCTCTCACTCGATAAG
TTTGGGGAGCCTTTGCATGCTTTCCCTGCCTTTACTGCGTCCGTCTGTCA
TCTCCGTCCGAGCTCCCGTGGCCACATCCTTTTGCGTGACTCCGATCCTC
GATCCCCTCCCTTGATCCAGCCAAATTATTTGTCGACGTCAGAAGATAGG
GCGATCGCCGCTGACGCTATCAGATTAACGAGAAGGTTAGTTTTGGAGTC
CAAAGCTCTAGCACCCTTTTCACCACAAGAATATATCCCGGGCTCTCGGT
ACGCAAGTCAGGAAGAGCTGGAGGCAGCAGCGGGGAGGGTTGGAACGACG
ATTTTCCACCCGGCGGGGACATGCAAAATGGGGCGGGGAGATAATGCAAT
GGCGGTCCTGGATGGACGGATGAAGGTGAGGGGGGTGAGGAGGCTTAGAG
TGTGCGACACCAGTGTCATGCCGCGGATCACTAGTGGGAATACGAATAGC
CCGACGGTGATGATTGCGGAGAAGGGGAGCGACTTTATCAATCAGGAGCA
TGGAACATGGGGGGGTCAGGGGTAACATCGCCAACCCCAAGGTCGACTGG
TGCTTGAAAACGGAGCCCGTCCCAGGCCTGCATGGCCGCACGTTAGCCTA
CCCGAGGGGCAAGGTCTTAGGTGGCTGCTCTTCAATTAATGGCATGATAT
ATATGCGTGGACAAGCGGAGGATTACGACGGATGGGCAGGGGAGATTGGG
GAGGGAGGGAGGGAGGGGGGGGAAAAGGAGGATTTTGGAAAGGCCTGGTC
CTGGAAGGAGGTGTTGCCATACTTTGTCAAGTCGGAGGATTACGCCGTTA
AGGGCGCAAAAGACGAAATGTGTGGTGATGTCTCCACTACTGCTGCTGCT
GCCGCAACAGGGGTTGTGCATGGTGTAGGAGGGGAGTGGCGGGTGGAGAG
ACAAAGGTTGAGTTGGGAGTTGCTTGATAAATTTCGTGATGCCTGTGCCG
AGCACGGCATTCCGAAGGTGACTGATTTCAATAAAGGGTTCAATGAGGGC
TCAAGCTATTTTCACGTGAATCAGTGGAACGGGATCAGATGGAACACGAG
CAAGATGAAGGCCGCCTCTTGGTCTTCCTTGTCCGCCAACTACGACTATG
TCATTGTTGGTGGAGGCAGTGCCGGCTGCGTGCTCGCAAATCGTCTCTCG
GTCAATCCACGCGTCAAAGTCCTGCTACTCGAAGCGGGTGGGGATGACCG
CTTCATCCCATTTGTCCATGTGCCGGTGGGATACCTGTGGAG back to top
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