jgi.p|Nanoce1779_2|552404, mRNA_2575 (mRNA) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|552404
Unique NamemRNA_2575
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length7188
Alignment locationscaffold_5:683824..691966 -

Link to JBrowse

Properties
Property NameValue
TranscriptId552490
TrackFilteredModels2
ProteinId552404
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_5supercontigscaffold_5:683824..691966 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|552404gene_2575Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|552404mRNA_2575-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CDS_2575CDS_2575Nannochloropsis oceanica (N. oceanica CCMP1779)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>mRNA_2575 ID=mRNA_2575|Name=jgi.p|Nanoce1779_2|552404|organism=Nannochloropsis oceanica|type=mRNA|length=7188bp
GAATGAGTGCCGGTTCAGCGGAGTTCGCTTGATTTTGGGCTATACAGCAG
ATAATGGAACGGCGGCTTTACCAGGCCCTTGCCCTTTCCATTTGCCGGTG
TCTTCGCCATTCAAAAACGCCTGGCCCTCATCCTCAAACGTTTCTCCCCT
CGCTTTTCTCATGCTAGTTTAGATCGCAATCTACTATTGGATCGCCCTCT
CCACAAGATTCTCCAGCAATACTTGTGTCTTCAGGGCCTCAAATGGCATC
TAGCTTCCGGTTTGCTCGTCCAGTGACCTTCGATGTCTTGAAGAGGCGCA
TATTTGACTTCTGACAACCATTCTCTCATCGGATTATGACGAGGAGTCGA
CATCCCTCCGCTCCAATTCCTCCGACTCTCTCTTTTTTGCGCACTCACCT
CTCTCCAATATATTCACAGACCGCAACTGCTGGACACCGGGTGGTTGTAA
TTACGATGACGGCTGGCGCCGTGTTCCCCTCCCTCGCCCGCCGTCATGGC
TCAGTTATGAGTCGTCGCCGATTCCTATCCGTCCTTGTTTTGCTGGGCCT
CCTGTTTGGACAGACGGCGCATGCACAAGAGGCCGAAAGCGCCTTAGATG
ACGTAGACATCACTGTCTTTACCACCGCCGTGGATGATGACGACCAAAGC
AGCCCTCCACCAGCAAATCCAGGGCCTGCAGTCAACTATAATGTCACCCT
TGCCCCGCCCGATGCCACCTTCCTCGCAGAATTGTTCAGTGCAGATGTCT
TAACCGAGTTACCTGATAATTCGGACGTAAAAATGGTCACTGATTTCCAG
TGGAAGCGCTTCCTCAACCGAAGCGATTCAATCCCATTCTTTCTCTGCGC
CACCAATGGCCACAGGGGCTACCAGGAGATGATGACGGCGTTCAATCATA
CAAATGCCCTCCCGCTCTTTGCAAACGCCAGCGTCTCTTGCCAACTCATT
CACGCGTCAGCCGGCACTGTCCTGAACGTAACAACTAGGCTGCCCCAGAT
TGTGAATGGAGGACCTATTCCCTCCGTCGTTAAAATTTCCAGTGACCTCC
GCAAAAGTGTCGACACGGGCATCTTTTTCAATGCCACCTCCCCGCGCCTG
CGTCTCGTCATGAGCCCGGGTATGGAACAAGATGAGAAGGCCCTCAGGAC
TGTACTTTACCGCATTGTCCGCCGCTTGCGTACGGGCGAGTTTCTGAACG
TGGTTGAAGAGGACTTTGAGTGGGCGGCTGTCGGCACCGCGGCAGACCCC
TCCACCGCTGCCCGCAGGCAAGTACTTCGGCGTCGGGTACGCCAGCGCCA
GCGTGAACGCCTGCTTATGATGCAGACGGATGATAATGAAGTAGATGACA
AAAGCCTGAATCGCTTTACGGAGGACCAGCCCAGGCGTGTGAATGGGGCG
CAGACATGGGCAGACTATGTGGACCCGGTGCTGGATGGCAAGTTTCAATG
CAGCTTTGAGCAAGTGGCAGCTTCGATCCAGTACCCATACCTTCGACTGA
GCGGCTTTGACAAAATTGTCAACGCGGCATCTGAAAATTGGACACTTCAA
TACAGCAATAGCACCCACCAGGGCAAGTCTGCCTGTCTCATGTCTTTGTT
GGCCTTTGTCAGCAGTGATCCCGCCGTGCTTTTCATCGAAGAATTCAAAA
ACATCGAAATGTACAACGCTGCAGCCGCCTACATTTCTCAGGGTGGGAGC
GATGGCATCTATGATGAGGACAAAAGCACCTTTCCCTACTACAGCGTGGG
CCTTGACGGGAAAGGGCAGGTATTGCAAGTCGTCGACACGGGCCTGGACC
AAAACAGCTGTTTTTTCAGTGATTCTTCAGGGCCTGTGGCCATCACAACC
ATTTCGGCGGCAGCATTTGATACCAAAAAGCGGAAGGTCATTCAGTACGT
GCAGTGGGCCGACGACACGGATGTGATCGATGGCCACGGGACGCATGTGG
CGGGCTCAGCTGTAGGCGAGTCTGTTGACCCAAATTTTGATTACGATACC
TATAAAGGGGCAGCTCCCGGGGCCAAGGTTGCCTTCTTCGACGTGGGTTT
TGATACAGGTAGTCTGAGCGTGCCCGCAAATTTTGCGACGCGCCTTTTTC
CACCGGGTTACAAGGCAGGGGCGCGGATTTTTAGCAACTCTTGGGGCACG
CCCGCGGCCAAGTCCTACACCACTTCAGACACAGAAATAGACAAGTTCAT
GCACGACAATGACGACGCTCTCATCTTTGTATCTGGAGGCAACAGTGGCC
AAGCTGGCTTAGGCAGCGTGTCTAGCCCGGCTTTGTCCAAGAATGTGATG
TCAGTCGGGGCCTCACTAAACGAGCGAGACGCTTCCTTCAACCGTGACCA
TGTGGCTTACTTTTCATCTTTGGGCCCCACCCTCGACGGTCGCATCAAGC
CCGACGTTCTTGCTCCGGGCCGGCGAGTGGTGTCGGCCGCTGCGGGGTCC
AACTGTGGCGTCATTAGGAGGCAAGGCACCTCTATGTCCACACCCATCGC
GGCGGGATCCGCGACCCTTGTCCGCCAGTACTTCATGGAGGGATATTACC
CACGCGGGATCAGGACGGCAACAGATGCCTTCGTGCCTACAGGGGCCTTG
GTGAAAGCCATGCTGATAAATTCGGCTGTGCCAATGAAGGCTGTTCGATT
TGCCAACAATTCGTTGATGCAGCTCGGCTTACCGCCTGATGTCTACCAGG
GTCACGGCCGCATCAAACTCAACGAGGTGCTGCGGGTCCAGAGCTTGGGT
AGCCGAACCACGTCCAATCTTTTTGTCGTCAACAACGCTACCATTAAGGA
GGCCGAAAAACACGTGTATAAGCTCAGTGTCCCCTCTGATAGTTCTTCAC
CCATCAAGGTGACTTTGGTGTGGATTGAGCCGCCTACGACGGCCAGCTCG
GCATCCATCGTCCTGCATGATTTGGACCTGATGGTTTACAGCCAGCTCAA
CAAGAAGGCATTCTACCCTAATGGCCTAAGTAAGAAGGATACCGTCAATA
CGGTAGAGAAGGTGGTGATCTACACGCCGACGGCTGGGGACACCTTGACC
GTAACGGTGACCGGTACGTCCATCGCCACCAGGCCGTGGCAGAAGTACGC
CTTGGTGGCCTCTGGAGACTTTGTGACCGGTGCGTGGTATTGCCAATTCC
CTCAGGCGGGACGTGCCGGCGAGGAATTTACGACGGAGAACTGCGCGAAA
ACCTGTGATAACTCGGGCAACTTCAAGCACCCGGTTTGTTGTAATGCCGC
GGCGGGCGACGTGTGTGACCTGGAGGAGCTGAGTAAGGCATTGGCGAGTA
GCTTTCAGTGCGACGCGGCGACACAACCCGTTGAATGCTTGCCTTCACCC
GGCAGGGAATCTACTCCTGCGCCTACTCCCTCTTTAGGCACCTGGTACTG
TCAATTTCCCCGACTTGGCCGCAGTAACGACGCAAGCACCATCTCCAATT
GCAACGTAAAGTGTGATGATAGCGGGGTCCGATTGAACCCCGTCTGCTGT
GACCCTGCCACAGCAGGAAACGTGTGCAATGAGGAGGAACAGGCTGCAGC
CGTGGCCAGTGGATTGAAATGCGACCCTGCGATACGCCCGGTCGATTGCT
CGAGGGGCGCTAACACTCCAGCCCCCACTTCAGTGTCTGCAAAGGGCACA
TGGTACTGTCAATTCCCCCGACTTGGCCGCAGAAACGACGCAAGCACCAT
CTCCAATTGCAACGTAAAGTGTGATGATAGCGGGGTCCGATTGAACCCCG
TCTGCTGTGACCCTGCCACAGCAGGAAACGTGTGCAATGAGGAGGAACAG
GCTGCAGCCGTGGCCAGTGGATTGAAATGCGACCCTGCGATACGCCCGGT
CGATTGCTCGAGGGGCGCTAACACTCCAGCCCCCACTTCAGTGTCTGCAA
AGGGCACATGGTACTGTCAATTCCCCCGACTTGGCCGCAGAAACGACGCA
AGCACCATCTCCAATTGCAACGTAAAGTGTGATGATAGCGGGGTCCGATT
GAACCCCGTCTGCTGTGACCCTGCCACAGCAGGAAACGTGTGCAATGAGG
AGGAACAGGCTGCAGCCGTGGCCAGTGGATTGAAATGCGACCCTGCGATA
CGCCCGGTCGATTGCTCGAGGGGCGCTAACACTCCAGCCCCCACTTCAGT
GTCTGCAAAGGGCGCATGGTACTGTCAATTCCCCCGACTTGGCCGCAGAA
ACGACGCAAGCACCATCTCCAATTGCAACGTAAAGTGTGATGATAGCGGG
GTCCGATTGAACCCCGTCTGCTGTGACCCTGCCACAGCAGGAAACGTGTG
CAATGAGGAGGAACAGGCTGCAGCCGTGGCCAGTGGATTGAAATGCGACC
CTGCGATACGCCCGGTCGATTGCTCGAGGGGCGCTAACACTCCAGCCCCC
ACTTCAGTGCCTCCGAGGGTGCCCACCAAAAAGCCAGTGGCACCGATCGC
GGGTGCGTGGTACTGCCAATATCCTAGGGAAACCCGCTCAAATGAGGCCT
ACACCCTGGCCAACTGTCGGGCGAAGTGTGACACTAGTGGTCTCCTTAAG
AATCCTATTTGTTGCTTGGAGGCAGAAGCCGGAGGTGTCTGCAATGGTAT
CGAGTATAATTCAGCGCAGCTCGCTGGAGTGCAATGCGACCCTTCGACCA
TGCCTGTCTGCGAAGCGTGATTGAATGATTAATTTAAATGGGGAACAGAG
GCGATATGTAGTAGAGCATGATATTGAGATGCTCGTGGATAAGTGGAATA
GAAGGAGGAGCTTAAAGTAAGGAGAAAAATATTTTCATCTTGTACCGTAA
GAAATCAGGATCACATTTTTTTCAAAGTTGTATGTCGAGAGACAAATGAG
AATAACAGACGGCAGTAAGGCTTGGAGTGTATGTTGAGAAAAGAGATCAG
CAGCCGTCTGTGTGTGATTATATCAGGCATGATTTGGAACTTCAAAACGA
TTAAGGGAACCAAACAGCGACATGGGTTGGGATTTTATGCTAAATACTAG
GGAGGAGAGAGAATACTTTTTGAGAGACAAAGTCGAAGAAGAGTAGGATC
GAAGGGAAAATAAAATAAAGAGATGGGGAAGGATTCAGTACCCCTGGGTA
ATCGTTGGCAAGTCTCCCCAAGCGCTTCGAATAAAGCTTTACATGAAACG
AGAGTGGTGAAAGAAAGGAACGACGGGCATGAACCAATTTTCTTCGATCC
ATCAAGCTTGCTTATCGAAGACGTTCACTCGATCGAGCGCTTCAATCGCC
GCTTTAATTAAAAAAGGCACCGAATGTGATTTACTTTGTCTACAATTGGA
GGGCAAGGCATTCACTGCTGAACTATTGGCAGCATTCTGAATCCTTCATC
TACGCTCTTCAAGGGATTAGGCCTTGTCTCTGCAGAAAATCTTTTATTTT
TTTTTGGTACTCTATCGGATAACGCGCGTAATGACAAACATGAAGTGAAG
GATCTGTGATCTTCCATGTCTCGAGCATGACATCAGCGGGCAAACCTTGA
GAGGTAAGGTAGGCCTTCCGCTTGGCCACCACTCTTTCAACCAAAGCAGG
GTCAGTAATGGTGTCGTCTTCCGAAAAGATATAGAGGCTGGGAACGAGGG
TATGATCATTTTCAATGTGCTCGATATATTTCTGCTCATAACGCCATGAT
TGTGCGATCCCGTAAATCTCAAGCCCGAAGCGAATAGTCGCGTACATGAG
CAAGCGGATAATCGGCGACTGCACACGTGCGCTTACGGCCCTGGCCCCAG
CCTCGGCATCCGCGGCGACAGGGCAGCTATCAAAAATTGTGCCTGCAAGC
TGAGGGAACTGGTAGTCGTCCGTGGGTGGTTCAGGATCACAGCAGAACCG
CCTTGCATCTCCCTGGCGATAATGCCCGTTCTGCAGTAACAGCATTCTAC
GATGTACAAAACAGCCACCATTTGAAAAATAATGCACGACCACTTTGGCA
TCGGGGAAAAAGAGAGGGATCAATGTCATTATCTCCTCGGCAGCTCGGAC
GGCTCCCCATTGCTTCCGACGCAGCAGCCTGCTCGCGGGGACCGTGTGCC
GCAACACCACCTCGCAGTTCATACTCTCATGATACATCTCCGCATATTTT
TTCAAATGCCTGTCTTGGCAGCCCAACCACCCCAGCAAGACCACCACAAG
CTTGACCTTGTCACGGCTCTCTATGGCGCGTGGTGTCTCCCCTTCTGCAG
GGACAGGTACGATTCTTAAGGCCGCACGCTTCGTGACACGGAAGCGGCCC
ACGTTAGGACCGTCATTGAACGGCACGGCCGCGTCCGGAAAACGTGTCGC
GGGGATCGTGAGGCAAGAATTGTTAGCATCCAAGTCGGCGAGCTTTTCCA
TCTTCTCAATGTCGTCTGGGGGGAGACAGAACGGAATTGTGAAGATGGCG
GGTGGATCGATAAAAATGCACGGGGAGATTTGGGCAAGGAAGGATGCCGT
TGATTTCGTCTACGAGCTCGGGCGATAAGGATTGATAGTAAGTCGGCGCA
GTGCGAGATCCGGGAGGATGGAATGACGCAAGCCCTGACATGATTGAGAC
GTGTATTGCATTGAAAGGGAGCTTGACTTTGAGCTGGCACTCACCTATCC
CATCCACGAACATTGGAACCCCTGAGTGGGAAATAAAAGATCGACTGTGC
ATCAATTGGTCCACAGAGCTCGGCGCGCTGCTGTCAGCTGCTGTCGCTGC
TACCTTGGAATAAGTGCTGGTACCGGCTGATGACAGCATTGTGGAGACAA
GAAGTTTGGGAGGGATAAGCCTGCGGCTGTCGTCATCATGGATTTTGCCG
GAATCGACCGATATTGCGTCGTGTTCTTGCATCTGCTGGTGGGCGGCGTA
CCGGTTCGTGATTATACAATACGTGTGAGTTGGAGGATGAACGTACTTTA
CTTGCCGGAACAACATCAGGGGCTAAATTCCAGGCTTGCAGGTGATAGAA
GGGATTGTCAAGACTCGTTTGTGTGCGCTGTGTGACACGTGTAATTGTCC
TTTTGGTGATGTCGGTCAATGACTAAATGGTAGCCCGTAACGAGCTACCC
CGGCAGCCCGTAACGGGCTACCCCGGGTAGCCGTTTACGGGCTCTTTGTA
TCAAGGTCTTTTCGTGTTTCGTGGTACGTGCCGAGGCAGGCACACTGTGC
CGTGCAGTATCAACCCCTGTGAAAAAGTTGCTCAGGAT
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protein sequence of jgi.p|Nanoce1779_2|552404

>mRNA_2575-protein ID=mRNA_2575-protein|Name=jgi.p|Nanoce1779_2|552404|organism=Nannochloropsis oceanica|type=polypeptide|length=1445bp
MTRSRHPSAPIPPTLSFLRTHLSPIYSQTATAGHRVVVITMTAGAVFPSL
ARRHGSVMSRRRFLSVLVLLGLLFGQTAHAQEAESALDDVDITVFTTAVD
DDDQSSPPPANPGPAVNYNVTLAPPDATFLAELFSADVLTELPDNSDVKM
VTDFQWKRFLNRSDSIPFFLCATNGHRGYQEMMTAFNHTNALPLFANASV
SCQLIHASAGTVLNVTTRLPQIVNGGPIPSVVKISSDLRKSVDTGIFFNA
TSPRLRLVMSPGMEQDEKALRTVLYRIVRRLRTGEFLNVVEEDFEWAAVG
TAADPSTAARRQVLRRRVRQRQRERLLMMQTDDNEVDDKSLNRFTEDQPR
RVNGAQTWADYVDPVLDGKFQCSFEQVAASIQYPYLRLSGFDKIVNAASE
NWTLQYSNSTHQGKSACLMSLLAFVSSDPAVLFIEEFKNIEMYNAAAAYI
SQGGSDGIYDEDKSTFPYYSVGLDGKGQVLQVVDTGLDQNSCFFSDSSGP
VAITTISAAAFDTKKRKVIQYVQWADDTDVIDGHGTHVAGSAVGESVDPN
FDYDTYKGAAPGAKVAFFDVGFDTGSLSVPANFATRLFPPGYKAGARIFS
NSWGTPAAKSYTTSDTEIDKFMHDNDDALIFVSGGNSGQAGLGSVSSPAL
SKNVMSVGASLNERDASFNRDHVAYFSSLGPTLDGRIKPDVLAPGRRVVS
AAAGSNCGVIRRQGTSMSTPIAAGSATLVRQYFMEGYYPRGIRTATDAFV
PTGALVKAMLINSAVPMKAVRFANNSLMQLGLPPDVYQGHGRIKLNEVLR
VQSLGSRTTSNLFVVNNATIKEAEKHVYKLSVPSDSSSPIKVTLVWIEPP
TTASSASIVLHDLDLMVYSQLNKKAFYPNGLSKKDTVNTVEKVVIYTPTA
GDTLTVTVTGTSIATRPWQKYALVASGDFVTGAWYCQFPQAGRAGEEFTT
ENCAKTCDNSGNFKHPVCCNAAAGDVCDLEELSKALASSFQCDAATQPVE
CLPSPGRESTPAPTPSLGTWYCQFPRLGRSNDASTISNCNVKCDDSGVRL
NPVCCDPATAGNVCNEEEQAAAVASGLKCDPAIRPVDCSRGANTPAPTSV
SAKGTWYCQFPRLGRRNDASTISNCNVKCDDSGVRLNPVCCDPATAGNVC
NEEEQAAAVASGLKCDPAIRPVDCSRGANTPAPTSVSAKGTWYCQFPRLG
RRNDASTISNCNVKCDDSGVRLNPVCCDPATAGNVCNEEEQAAAVASGLK
CDPAIRPVDCSRGANTPAPTSVSAKGAWYCQFPRLGRRNDASTISNCNVK
CDDSGVRLNPVCCDPATAGNVCNEEEQAAAVASGLKCDPAIRPVDCSRGA
NTPAPTSVPPRVPTKKPVAPIAGAWYCQYPRETRSNEAYTLANCRAKCDT
SGLLKNPICCLEAEAGGVCNGIEYNSAQLAGVQCDPSTMPVCEA*
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mRNA from alignment at scaffold_5:683824..691966-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_2575 ID=mRNA_2575|Name=jgi.p|Nanoce1779_2|552404|organism=Nannochloropsis oceanica|type=mRNA|length=8143bp|location=Sequence derived from alignment at scaffold_5:683824..691966- (Nannochloropsis oceanica)
GAATGAGTGCCGGTTCAGCGGAGTTCGCTTGATTTTGGGCTATACAGCAG ATAATGGAACGGCGGCTTTACCAGGCCCTTGCCCTTTCCATTTGCCGGTG TCTTCGCCATTCAAAAACGCCTGGCCCTCATCCTCAAACGTTTCTCCCCT CGCTTTTCTCATGCTAGTTTAGATCGCAATCTACTATTGGATCGCCCTCT CCACAAGATTCTCCAGCAATACTTGTGTCTTCAGGGCCTCAAATGGCATC TAGCTTCCGGTTTGCTCGTCCAGTGACCTTCGATGTCTTGAAGAGGCGCA TATTTGACTTCTGACAACCATTCTCTCATCGGATTATGACGAGGAGTCGA CATCCCTCCGCTCCAATTCCTCCGACTCTCTCTTTTTTGCGCACTCACCT CTCTCCAATATATTCACAGACCGCAACTGCTGGACACCGGGTGGTTGTAA TTACGATGACGGCTGGCGCCGTGTTCCCCTCCCTCGCCCGCCGTCATGGC TCAGTTATGAGTCGTCGCCGATTCCTATCCGTCCTTGTTTTGCTGGGCCT CCTGTTTGGACAGACGGCGCATGCACAAGAGGCCGAAAGCGCCTTAGATG ACGTAGACATCACTGTCTTTACCACCGCCGTGGATGATGACGACCAAAGC AGCCCTCCACCAGCAAATCCAGGGCCTGCAGTCAACTATAATGTCACCCT TGCCCCGCCCGATGCCACCTTCCTCGCAGAATTGTTCAGTGCAGATGTCT TAACCGAGTTACCTGATAATTCGGACGTAAAAATGGTCACTGATTTCCAG TGGAAGCGCTTCCTCAACCGAAGCGATTCAATCCCATTCTTTCTCTGCGC CACCAATGGCCACAGGGGCTACCAGGAGATGATGACGGCGTTCAATCATA CAAATGCCCTCCCGCTCTTTGCAAACGCCAGCGTCTCTTGCCAACTCATT CACGCGTCAGCCGGCACTGTCCTGAACGTAACAACTAGGCTGCCCCAGAT TGTGAATGGAGGACCTATTCCCTCCGTCGTTAAAATTTCCAGTGACCTCC GCAAAAGTGTCGACACGGGCATCTTTTTCAATGCCACCTCCCCGCGCCTG CGTCTCGTCATGAGCCCGGGTATGGAACAAGATGAGAAGGCCCTCAGGAC TGTACTTTACCGCATTGTCCGCCGCTTGCGTACGGGCGAGTTTCTGAACG TGGTTGAAGAGGACTTTGAGTGGGCGGCTGTCGGCACCGCGGCAGACCCC TCCACCGCTGCCCGCAGGCAAGTACTTCGGCGTCGGGTACGCCAGCGCCA GCGTGAACGCCTGCTTATGATGCAGACGGATGATAATGAAGTAGATGACA AAAGCCTGAATCGCTTTACGGAGGACCAGCCCAGGCGTGTGAATGGGGCG CAGACATGGGCAGACTATGTGGACCCGGTGCTGGATGGCAAGTTTCAATG CAGCTTTGAGCAAGTGGCAGCTTCGATCCAGTACCCATACCTTCGACTGA GCGGCTTTGACAAAATTGTCAACGCGGCATCTGAAAATTGGACACTTCAA TACAGCAATAGCACCCACCAGGGCAAGTCTGCCTGTCTCATGTCTTTGTT GGCCTTTGTCAGCAGTGATCCCGCCGTGCTTTTCATCGAAGAATTCAAAA ACATCGAAATGTACAACGCTGCAGCCGCCTACATTTCTCAGGGTGGGAGC GATGGCATCTATGATGAGGACAAAAGCACCTTTCCCTACTACAGCGTGGG CCTTGACGGGAAAGGGCAGGTATTGCAAGTCGTCGACACGGGCCTGGACC AAAACAGCTGTTTTTTCAGTGATTCTTCAGGGCCTGTGGCCATCACAACC ATTTCGGCGGCAGCATTTGATACCAAAAAGCGGAAGGTCATTCAGTACGT GCAGTGGGCCGACGACACGGATGTGATCGATGGCCACGGGACGCATGTGG CGGGCTCAGCTGTAGGCGAGTCTGTTGACCCAAATTTTGATTACGATACC TATAAAGGGGCAGCTCCCGGGGCCAAGGTTGCCTTCTTCGACGTGGGTTT TGATACAGGTAGTCTGAGCGTGCCCGCAAATTTTGCGACGCGCCTTTTTC CACCGGGTTACAAGGCAGGGGCGCGGATTTTTAGCAACTCTTGGGGCACG CCCGCGGCCAAGTCCTACACCACTTCAGACACAGAAATAGACAAGTTCAT GCACGACAATGACGACGCTCTCATCTTTGTATCTGGAGGCAACAGTGGCC AAGCTGGCTTAGGCAGCGTGTCTAGCCCGGCTTTGTCCAAGAATGTGATG TCAGTCGGGGCCTCACTAAACGAGCGAGACGCTTCCTTCAACCGTGACCA TGTGGCTTACTTTTCATCTTTGGGCCCCACCCTCGACGGTCGCATCAAGC CCGACGTTCTTGCTCCGGGCCGGCGAGTGGTGTCGGCCGCTGCGGGGTCC AACTGTGGCGTCATTAGGAGGCAAGGCACCTCTATGTCCACACCCATCGC GGCGGGATCCGCGACCCTTGTCCGCCAGTACTTCATGGAGGGATATTACC CACGCGGGATCAGGACGGCAACAGATGCCTTCGTGCCTACAGGGGCCTTG GTGAAAGCCATGCTGATAAATTCGGCTGTGCCAATGAAGGCTGTTCGATT TGCCAACAATTCGTTGATGCAGCTCGGCTTACCGCCTGATGTCTACCAGG GTCACGGCCGCATCAAACTCAACGAGGTGCTGCGGGTCCAGAGCTTGGGT AGCCGAACCACGTCCAATCTTTTTGTCGTCAACAACGCTACCATTAAGGA GGCCGAAAAACACGTGTATAAGCTCAGTGTCCCCTCTGATAGTTCTTCAC CCATCAAGGTGACTTTGGTGTGGATTGAGCCGCCTACGACGGCCAGCTCG GCATCCATCGTCCTGCATGATTTGGACCTGATGGTTTACAGCCAGCTCAA CAAGAAGGCATTCTACCCTAATGGCCTAAGTAAGAAGGATACCGTCAATA CGGTAGAGAAGGTGGTGATCTACACGCCGACGGCTGGGGACACCTTGACC GTAACGGTGACCGGTACGTCCATCGCCACCAGGCCGTGGCAGAAGTACGC CTTGGTGGCCTCTGGAGACTTTGTGACCGGTGCGTGGTATTGCCAATTCC CTCAGGCGGGACGTGCCGGCGAGGAATTTACGACGGAGAACTGCGCGAAA ACCTGTGATAACTCGGGCAACTTCAAGCACCCGGTTTGTTGTAATGCCGC GGCGGGCGACGTGTGTGACCTGGAGGAGCTGAGTAAGGCATTGGCGAGTA GCTTTCAGTGCGACGCGGCGACACAACCCGTTGAATGCTTGCCTTCACCC GGCAGGGAATCTACTCCTGCGCCTACTCCCTCTTTAGGCACCTGGTACTG TCAATTTCCCCGACTTGGCCGCAGTAACGACGCAAGCACCATCTCCAATT GCAACGTAAAGTGTGATGATAGCGGGGTCCGATTGAACCCCGTCTGCTGT GACCCTGCCACAGCAGGAAACGTGTGCAATGAGGAGGAACAGGCTGCAGC CGTGGCCAGTGGATTGAAATGCGACCCTGCGATACGCCCGGTCGATTGCT CGAGGGGCGCTAACACTCCAGCCCCCACTTCAGTGTCTGCAAAGGGCACA TGGTACTGTCAATTCCCCCGACTTGGCCGCAGAAACGACGCAAGCACCAT CTCCAATTGCAACGTAAAGTGTGATGATAGCGGGGTCCGATTGAACCCCG TCTGCTGTGACCCTGCCACAGCAGGAAACGTGTGCAATGAGGAGGAACAG GCTGCAGCCGTGGCCAGTGGATTGAAATGCGACCCTGCGATACGCCCGGT CGATTGCTCGAGGGGCGCTAACACTCCAGCCCCCACTTCAGTGTCTGCAA AGGGCACATGGTACTGTCAATTCCCCCGACTTGGCCGCAGAAACGACGCA AGCACCATCTCCAATTGCAACGTAAAGTGTGATGATAGCGGGGTCCGATT GAACCCCGTCTGCTGTGACCCTGCCACAGCAGGAAACGTGTGCAATGAGG AGGAACAGGCTGCAGCCGTGGCCAGTGGATTGAAATGCGACCCTGCGATA CGCCCGGTCGATTGCTCGAGGGGCGCTAACACTCCAGCCCCCACTTCAGT GTCTGCAAAGGGCGCATGGTACTGTCAATTCCCCCGACTTGGCCGCAGAA ACGACGCAAGCACCATCTCCAATTGCAACGTAAAGTGTGATGATAGCGGG GTCCGATTGAACCCCGTCTGCTGTGACCCTGCCACAGCAGGAAACGTGTG CAATGAGGAGGAACAGGCTGCAGCCGTGGCCAGTGGATTGAAATGCGACC CTGCGATACGCCCGGTCGATTGCTCGAGGGGCGCTAACACTCCAGCCCCC ACTTCAGTGCCTCCGAGGGTGCCCACCAAAAAGCCAGTGGCACCGATCGC GGGTGCGTGGTACTGCCAATATCCTAGGGAAACCCGCTCAAATGAGGCCT ACACCCTGGCCAACTGTCGGGCGAAGTGTGACACTAGTGGTCTCCTTAAG AATCCTATTTGTTGCTTGGAGGCAGAAGCCGGAGGTGTCTGCAATGGTAT CGAGTATAATTCAGCGCAGCTCGCTGGAGTGCAATGCGACCCTTCGACCA TGCCTGTCTGCGAAGCGTGATTGAATGATTAATTTAAATGGGGAACAGAG GCGATATGTAGTAGAGCATGATATTGAGATGCTCGTGGATAAGTGGAATA GAAGGAGGAGCTTAAAGTAAGGAGAAAAATATTTTCATCTTGTACCGTAA GAAATCAGGATCACATTTTTTTCAAAGTTGTATGTCGAGAGACAAATGAG AATAACAGACGGCAGTAAGGCTTGGAGTGTATGTTGAGAAAAGAGATCAG CAGCCGTCTGTGTGTGATTATATCAGGCATGATTTGGAACTTCAAAACGA TTAAGGGAACCAAACAGCGACATGGGTTGGGATTTTATGCTAAATACTAG GGAGGAGAGAGAATACTTTTTGAGAGACAAAGTCGAAGAAGAGTAGGATC GAAGGGAAAATAAAATAAAGAGATGGGGAAGGATTCAGTACCCCTGGGTA ATCGTTGGCAAGTCTCCCCAAGCGCTTCGAATAAAGCTTTACATGAAACG AGAGTGGTGAAAGAAAGGAACGACGGGCATGAACCAATTTTCTTCGATCC ATCAAGCTTGCTTATCGAAGACGTTCACTCGATCGAGCGCTTCAATCGCC GCTTTAATTAAAAAAGGCACCGAATGTGATTTACTTTGTCTACAATTGGA GGGCAAGGCATTCACTGCTGAACTATTGGCAGCATTCTGAATCCTTCATC TACGCTCTTCAAGGGATTAGGCCTTGTCTCTGCAGAAAATCTTTTATTTT TTTTTGGTACTCTATCGGATAACGCGCGTAATGACAAACATGAAGTGAAG GATCTGTGATCTTCCATGTCTCGAGCATGACATCAGCGGGCAAACCTTGA GAGGTAAGGTAGGCCTTCCGCTTGGCCACCACTCTTTCAACCAAAGCAGG GTCAGTAATGGTGTCGTCTTCCGAAAAGATATAGAGGCTGGGAACGAGGG TATGATCATTTTCAATGTGCTCGATATATTTCTGAGAATAACAGACGGCA GTAAGGCTTGGAGTGTATGTTGAGAAAAGAGATCAGCAGCCGTCTGTGTG TGATTATATCAGGCATGATTTGGAACTTCAAAACGATTAAGGGAACCAAA CAGCGACATGGGTTGGGATTTTATGCTAAATACTAGGGAGGAGAGAGAAT ACTTTTTGAGAGACAAAGTCGAAGAAGAGTAGGATCGAAGGGAAAATAAA ATAAAGAGATGGGGAAGGATTCAGTACCCCTGGGTAATCGTTGGCAAGTC TCCCCAAGCGCTTCGAATAAAGCTTTACATGAAACGAGAGTGGTGAAAGA AAGGAACGACGGGCATGAACCAATTTTCTTCGATCCATCAAGCTTGCTTA TCGAAGACGTTCACTCGATCGAGCGCTTCAATCGCCGCTTTAATTAAAAA AGGCACCGAATGTGATTTACTTTGTCTACAATTGGAGGGCAAGGCATTCA CTGCTGAACTATTGGCAGCATTCTGAATCCTTCATCTACGCTCTTCAAGG GATTAGGCCTTGTCTCTGCAGAAAATCTTTTATTTTTTTTTGGTACTCTA TCGGATAACGCGCGTAATGACAAACATGAAGTGAAGGATCTGTGATCTTC CATGTCTCGAGCATGACATCAGCGGGCAAACCTTGAGAGGTAAGGTAGGC CTTCCGCTTGGCCACCACTCTTTCAACCAAAGCAGGGTCAGTAATGGTGT CGTCTTCCGAAAAGATATAGAGGCTGGGAACGAGGGTATGATCATTTTCA ATGTGCTCGATATATTTCTGCTCATAACGCCATGATTGTGCGATCCCGTA AATCTCAAGCCCGAAGCGAATAGTCGCGTACATGAGCAAGCGGATAATCG GCGACTGAAAAGGAGTACGCAACCATTCGAGGTGACAGAAGTGAGTTGAA ACAAATTTCGTCACTGCCTCCGAAGGCTTCACTCTTCATCCCCGTCTAAT CGTTCAACCCCCTCCTTTCTCTCTATTTATTCAACCCCTTCCCCCCTCCC GCATTCCAAACCAAGTTACACACCTGCACACGTGCGCTTACGGCCCTGGC CCCAGCCTCGGCATCCGCGGCGACAGGGCAGCTATCAAAAATTGTGCCTG CAAGCTGAGGGAACTGGTAGTCGTCCGTGGGTGGTTCAGGATCACAGCAG AACCGCCTTGCATCTCCCTGGCGATAATGCCCGTTCTGCAGTAACAGCAT TCTACGATGTACAAAACAGCCACCATTTGAAAAATAATGCACGACCACTT TGGCATCGGGGAAAAAGAGAGGGATCAATGTCATTATCTCCTCGGCAGCT CGGACGGCTCCCCATTGCTTCCGACGCAGCAGCCTGCTCGCGGGGACCGT GTGCCGCAACACCACCTCGCAGTTCATACTCTCATGATACATCTCCGCAT ATTTTTTCAAATGCCTGTCTTGGCAGCCCAACCACCCCAGCAAGACCACC ACAAGCTTGACCTTGTCACGGCTCTCTATGGCGCGTGGTGTCTCCCCTTC TGCAGGGACAGGTACGATTCTTAAGGCCGCACGCTTCGTGACACGGAAGC GGCCCACGTTAGGACCGTCATTGAACGGCACGGCCGCGTCCGGAAAACGT GTCGCGGGGATCGTGAGGCAAGAATTGTTAGCATCCAAGTCGGCGAGCTT TTCCATCTTCTCAATGTCGTCTGGGGGGAGACAGAACGGAATTGTGAAGA TGGCGGGTGGATCGATAAAAATGCACGGGGAGATTTGGGCAAGGAAGGAT GCCGTTGATTTCGTCTACGAGCTCGGGCGATAAGGATTGATAGTAAGTCG GCGCAGTGCGAGATCCGGGAGGATGGAATGACGCAAGCCCTGACATGATT GAGACGTGTATTGCATTGAAAGGGAGCTTGACTTTGAGCTGGCACTCACC TATCCCATCCACGAACATTGGAACCCCTGAGTGGGAAATAAAAGATCGAC TGTGCATCAATTGGTCCACAGAGCTCGGCGCGCTGCTGTCAGCTGCTGTC GCTGCTACCTTGGAATAAGTGCTGGTACCGGCTGATGACAGCATTGTGGA GACAAGAAGTTTGGGAGGGATAAGCCTGCGGCTGTCGTCATCATGGATTT TGCCGGAATCGACCGATATTGCGTCGTGTTCTTGCATCTGCTGGTGGGCG GCGTACCGGTTCGTGATTATACAATACGTGTGAGTTGGAGGATGAACGTA CTTTACTTGCCGGAACAACATCAGGGGCTAAATTCCAGGCTTGCAGGTGA TAGAAGGGATTGTCAAGACTCGTTTGTGTGCGCTGTGTGACACGTGTAAT TGTCCTTTTGGTGATGTCGGTCAATGACTAAATGGTAGCCCGTAACGAGC TACCCCGGCAGCCCGTAACGGGCTACCCCGGGTAGCCGTTTACGGGCTCT TTGTATCAAGGTCTTTTCGTGTTTCGTGGTACGTGCCGAGGCAGGCACAC TGTGCCGTGCAGTATCAACCCCTGTGAAAAAGTTGCTCAGGAT
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Coding sequence (CDS) from alignment at scaffold_5:683824..691966-

>mRNA_2575 ID=mRNA_2575|Name=jgi.p|Nanoce1779_2|552404|organism=Nannochloropsis oceanica|type=CDS|length=4335bp|location=Sequence derived from alignment at scaffold_5:683824..691966- (Nannochloropsis oceanica)
ATGACGAGGAGTCGACATCCCTCCGCTCCAATTCCTCCGACTCTCTCTTT
TTTGCGCACTCACCTCTCTCCAATATATTCACAGACCGCAACTGCTGGAC
ACCGGGTGGTTGTAATTACGATGACGGCTGGCGCCGTGTTCCCCTCCCTC
GCCCGCCGTCATGGCTCAGTTATGAGTCGTCGCCGATTCCTATCCGTCCT
TGTTTTGCTGGGCCTCCTGTTTGGACAGACGGCGCATGCACAAGAGGCCG
AAAGCGCCTTAGATGACGTAGACATCACTGTCTTTACCACCGCCGTGGAT
GATGACGACCAAAGCAGCCCTCCACCAGCAAATCCAGGGCCTGCAGTCAA
CTATAATGTCACCCTTGCCCCGCCCGATGCCACCTTCCTCGCAGAATTGT
TCAGTGCAGATGTCTTAACCGAGTTACCTGATAATTCGGACGTAAAAATG
GTCACTGATTTCCAGTGGAAGCGCTTCCTCAACCGAAGCGATTCAATCCC
ATTCTTTCTCTGCGCCACCAATGGCCACAGGGGCTACCAGGAGATGATGA
CGGCGTTCAATCATACAAATGCCCTCCCGCTCTTTGCAAACGCCAGCGTC
TCTTGCCAACTCATTCACGCGTCAGCCGGCACTGTCCTGAACGTAACAAC
TAGGCTGCCCCAGATTGTGAATGGAGGACCTATTCCCTCCGTCGTTAAAA
TTTCCAGTGACCTCCGCAAAAGTGTCGACACGGGCATCTTTTTCAATGCC
ACCTCCCCGCGCCTGCGTCTCGTCATGAGCCCGGGTATGGAACAAGATGA
GAAGGCCCTCAGGACTGTACTTTACCGCATTGTCCGCCGCTTGCGTACGG
GCGAGTTTCTGAACGTGGTTGAAGAGGACTTTGAGTGGGCGGCTGTCGGC
ACCGCGGCAGACCCCTCCACCGCTGCCCGCAGGCAAGTACTTCGGCGTCG
GGTACGCCAGCGCCAGCGTGAACGCCTGCTTATGATGCAGACGGATGATA
ATGAAGTAGATGACAAAAGCCTGAATCGCTTTACGGAGGACCAGCCCAGG
CGTGTGAATGGGGCGCAGACATGGGCAGACTATGTGGACCCGGTGCTGGA
TGGCAAGTTTCAATGCAGCTTTGAGCAAGTGGCAGCTTCGATCCAGTACC
CATACCTTCGACTGAGCGGCTTTGACAAAATTGTCAACGCGGCATCTGAA
AATTGGACACTTCAATACAGCAATAGCACCCACCAGGGCAAGTCTGCCTG
TCTCATGTCTTTGTTGGCCTTTGTCAGCAGTGATCCCGCCGTGCTTTTCA
TCGAAGAATTCAAAAACATCGAAATGTACAACGCTGCAGCCGCCTACATT
TCTCAGGGTGGGAGCGATGGCATCTATGATGAGGACAAAAGCACCTTTCC
CTACTACAGCGTGGGCCTTGACGGGAAAGGGCAGGTATTGCAAGTCGTCG
ACACGGGCCTGGACCAAAACAGCTGTTTTTTCAGTGATTCTTCAGGGCCT
GTGGCCATCACAACCATTTCGGCGGCAGCATTTGATACCAAAAAGCGGAA
GGTCATTCAGTACGTGCAGTGGGCCGACGACACGGATGTGATCGATGGCC
ACGGGACGCATGTGGCGGGCTCAGCTGTAGGCGAGTCTGTTGACCCAAAT
TTTGATTACGATACCTATAAAGGGGCAGCTCCCGGGGCCAAGGTTGCCTT
CTTCGACGTGGGTTTTGATACAGGTAGTCTGAGCGTGCCCGCAAATTTTG
CGACGCGCCTTTTTCCACCGGGTTACAAGGCAGGGGCGCGGATTTTTAGC
AACTCTTGGGGCACGCCCGCGGCCAAGTCCTACACCACTTCAGACACAGA
AATAGACAAGTTCATGCACGACAATGACGACGCTCTCATCTTTGTATCTG
GAGGCAACAGTGGCCAAGCTGGCTTAGGCAGCGTGTCTAGCCCGGCTTTG
TCCAAGAATGTGATGTCAGTCGGGGCCTCACTAAACGAGCGAGACGCTTC
CTTCAACCGTGACCATGTGGCTTACTTTTCATCTTTGGGCCCCACCCTCG
ACGGTCGCATCAAGCCCGACGTTCTTGCTCCGGGCCGGCGAGTGGTGTCG
GCCGCTGCGGGGTCCAACTGTGGCGTCATTAGGAGGCAAGGCACCTCTAT
GTCCACACCCATCGCGGCGGGATCCGCGACCCTTGTCCGCCAGTACTTCA
TGGAGGGATATTACCCACGCGGGATCAGGACGGCAACAGATGCCTTCGTG
CCTACAGGGGCCTTGGTGAAAGCCATGCTGATAAATTCGGCTGTGCCAAT
GAAGGCTGTTCGATTTGCCAACAATTCGTTGATGCAGCTCGGCTTACCGC
CTGATGTCTACCAGGGTCACGGCCGCATCAAACTCAACGAGGTGCTGCGG
GTCCAGAGCTTGGGTAGCCGAACCACGTCCAATCTTTTTGTCGTCAACAA
CGCTACCATTAAGGAGGCCGAAAAACACGTGTATAAGCTCAGTGTCCCCT
CTGATAGTTCTTCACCCATCAAGGTGACTTTGGTGTGGATTGAGCCGCCT
ACGACGGCCAGCTCGGCATCCATCGTCCTGCATGATTTGGACCTGATGGT
TTACAGCCAGCTCAACAAGAAGGCATTCTACCCTAATGGCCTAAGTAAGA
AGGATACCGTCAATACGGTAGAGAAGGTGGTGATCTACACGCCGACGGCT
GGGGACACCTTGACCGTAACGGTGACCGGTACGTCCATCGCCACCAGGCC
GTGGCAGAAGTACGCCTTGGTGGCCTCTGGAGACTTTGTGACCGGTGCGT
GGTATTGCCAATTCCCTCAGGCGGGACGTGCCGGCGAGGAATTTACGACG
GAGAACTGCGCGAAAACCTGTGATAACTCGGGCAACTTCAAGCACCCGGT
TTGTTGTAATGCCGCGGCGGGCGACGTGTGTGACCTGGAGGAGCTGAGTA
AGGCATTGGCGAGTAGCTTTCAGTGCGACGCGGCGACACAACCCGTTGAA
TGCTTGCCTTCACCCGGCAGGGAATCTACTCCTGCGCCTACTCCCTCTTT
AGGCACCTGGTACTGTCAATTTCCCCGACTTGGCCGCAGTAACGACGCAA
GCACCATCTCCAATTGCAACGTAAAGTGTGATGATAGCGGGGTCCGATTG
AACCCCGTCTGCTGTGACCCTGCCACAGCAGGAAACGTGTGCAATGAGGA
GGAACAGGCTGCAGCCGTGGCCAGTGGATTGAAATGCGACCCTGCGATAC
GCCCGGTCGATTGCTCGAGGGGCGCTAACACTCCAGCCCCCACTTCAGTG
TCTGCAAAGGGCACATGGTACTGTCAATTCCCCCGACTTGGCCGCAGAAA
CGACGCAAGCACCATCTCCAATTGCAACGTAAAGTGTGATGATAGCGGGG
TCCGATTGAACCCCGTCTGCTGTGACCCTGCCACAGCAGGAAACGTGTGC
AATGAGGAGGAACAGGCTGCAGCCGTGGCCAGTGGATTGAAATGCGACCC
TGCGATACGCCCGGTCGATTGCTCGAGGGGCGCTAACACTCCAGCCCCCA
CTTCAGTGTCTGCAAAGGGCACATGGTACTGTCAATTCCCCCGACTTGGC
CGCAGAAACGACGCAAGCACCATCTCCAATTGCAACGTAAAGTGTGATGA
TAGCGGGGTCCGATTGAACCCCGTCTGCTGTGACCCTGCCACAGCAGGAA
ACGTGTGCAATGAGGAGGAACAGGCTGCAGCCGTGGCCAGTGGATTGAAA
TGCGACCCTGCGATACGCCCGGTCGATTGCTCGAGGGGCGCTAACACTCC
AGCCCCCACTTCAGTGTCTGCAAAGGGCGCATGGTACTGTCAATTCCCCC
GACTTGGCCGCAGAAACGACGCAAGCACCATCTCCAATTGCAACGTAAAG
TGTGATGATAGCGGGGTCCGATTGAACCCCGTCTGCTGTGACCCTGCCAC
AGCAGGAAACGTGTGCAATGAGGAGGAACAGGCTGCAGCCGTGGCCAGTG
GATTGAAATGCGACCCTGCGATACGCCCGGTCGATTGCTCGAGGGGCGCT
AACACTCCAGCCCCCACTTCAGTGCCTCCGAGGGTGCCCACCAAAAAGCC
AGTGGCACCGATCGCGGGTGCGTGGTACTGCCAATATCCTAGGGAAACCC
GCTCAAATGAGGCCTACACCCTGGCCAACTGTCGGGCGAAGTGTGACACT
AGTGGTCTCCTTAAGAATCCTATTTGTTGCTTGGAGGCAGAAGCCGGAGG
TGTCTGCAATGGTATCGAGTATAATTCAGCGCAGCTCGCTGGAGTGCAAT
GCGACCCTTCGACCATGCCTGTCTGCGAAGCGTGA
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Synonyms
Publications