Properties
| Property Name | Value |
|---|
| TranscriptId | 524854 |
| Track | FilteredModels2 |
| ProteinId | 524768 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_4 | supercontig | scaffold_4:1181316..1183457 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_2254 ID=mRNA_2254|Name=jgi.p|Nanoce1779_2|524768|organism=Nannochloropsis oceanica|type=mRNA|length=1080bp
ATGGAGCAGAAATTGTCCCTGGCCAGCAAGAGCGCCGCCGCCGCCCTGCC
GGACGAAGAGCTCGTGCTTAAGCCTTCTGAGATGAAGCTGCGTGAGCTAG
CAGGCGAGATGGACAACGAGCTCCTCCTAAAGGATAATCCGGGCCGCTAT
GTCATCTTCCCCATTCAGCACCAGGATATCTGGGACATGTACAAGCAAGC
TGAGGCCTCTTTCTGGACGGCGGAGGAGCTGGACCTGGCCCACGACAAGA
CTGACTGGGAGAAGCTTTCCGACAAGGAGCGTCATTTCGTCTCGCACGTC
CTCGCCTTCTTCGCCGCGTCCGATGGGATCGTTAACGAAAACCTGGCCTT
GAACTTCTCCAACGAGATTCAGCTGCCGGAGGCCCGCTGCTTCTACGGCT
TCCAGATAGCCATCGAGAACATCCACAGCGAGGTATACTCCCTCCTCATC
GACACGTACATCAAGAACGGTCAAGAGAAGCACAAGCTCCTCAATGCCAT
TGATACTGTGCCTTGTGTCCGTCGGAAGGCGCAGTGGGCCCTCAGGTGGT
GCGACCGGAAGTACGCCTCTTTCGCCGAGCGCCTGATTGCGTTTGCGGCT
GTGGAAGGTATATTTTTCAGTGGGTCGTTCTGCTCGATATTCTGGCTGAA
GAAGAGGGGTTTGATGCCGGGGCTCTCCTTCTCGAACGAGCTCATCTCCC
GCGACGAGGGTTTGCACTGTGACTTCGCCTGCCTCCTATACAGCAAGTGC
AGCATCAAGTGCCCGGAGGAGCGTGTGGTGGACATCATCAAGGACGCGGT
GGCCATCGAGAAGGAATTCATCACCGATGCCCTGCCCGTGGAGCTGATTG
GGATGAATAGCCGCCTCATGTGCGACTACATCGAGTTCTGCGCCGACCGG
CTCCTTTTGTCGTTGGGCTGCTCCAAGGCGTACCATACCCGGAACCCGTT
TGACTGGATGGACCTCATCTCCTTGCAGGGCAAGACCAACTTTTTCGAGA
AGCGCGTGGGGGAGTACGCGAAAAGCGGCGTCGGTGGAAATGTTGAGGAC
CAGGTTTTCTCTCTGGAGGCCGAGTTCTAA back to topprotein sequence of jgi.p|Nanoce1779_2|524768 >mRNA_2254-protein ID=mRNA_2254-protein|Name=jgi.p|Nanoce1779_2|524768|organism=Nannochloropsis oceanica|type=polypeptide|length=360bp
MEQKLSLASKSAAAALPDEELVLKPSEMKLRELAGEMDNELLLKDNPGRY
VIFPIQHQDIWDMYKQAEASFWTAEELDLAHDKTDWEKLSDKERHFVSHV
LAFFAASDGIVNENLALNFSNEIQLPEARCFYGFQIAIENIHSEVYSLLI
DTYIKNGQEKHKLLNAIDTVPCVRRKAQWALRWCDRKYASFAERLIAFAA
VEGIFFSGSFCSIFWLKKRGLMPGLSFSNELISRDEGLHCDFACLLYSKC
SIKCPEERVVDIIKDAVAIEKEFITDALPVELIGMNSRLMCDYIEFCADR
LLLSLGCSKAYHTRNPFDWMDLISLQGKTNFFEKRVGEYAKSGVGGNVED
QVFSLEAEF* back to topmRNA from alignment at scaffold_4:1181316..1183457- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_2254 ID=mRNA_2254|Name=jgi.p|Nanoce1779_2|524768|organism=Nannochloropsis oceanica|type=mRNA|length=2142bp|location=Sequence derived from alignment at scaffold_4:1181316..1183457- (Nannochloropsis oceanica)
ATGGAGCAGAAATTGTCCCTGGCCAGCAAGAGCGCCGCCGCCGCCCTGCC
GGACGAAGAGCTCGTGCTTAAGCCTTCTGAGATGAAGCTGCGTGAGCTAG
CAGGCGAGATGGACAACGAGCTCCTCCTAAAGGATAATCCGGGCCGCTAT
GTCATCTTCCCCATTCAGCACCAGGATGTACGTATTGACAGACGGAGGTG
GTAGTGGGGGGGGGGGGCTAATTGCCGTGTGCCTTGTTTTCCCGCCCTCT
TCTGCGGGTGTGTGTGTCTGCCTTAGGTCCATCTTGCCCAGTATTGGCAT
TGGCAGCACAGCAACAACCTGGCAGGGCAAGCTTCCTGCTGTGTTTACCG
CTGTATCTGCAGTGTCTATTGCTCAAGTTGTTTCCCGCCTTCTGTGGTCT
GTGGAGGGAGGCTCGTGCCTCGGCATGCGCAGCCTCCCTCCCTCCTCTCC
ATGCCTGCCGCGCCAGCACCATCATTTATGCGTACCTTCTCGACAGGAGG
CAGGCAGCAAGTGTGTGATGAAATGGAGATGTATAGGTTCTGCTGCTCGC
TTTCTGCTGCTTTCCTGCCCAATACTCTCGGTCCCCACTTACCATCACTT
CCCTCCTTCCCTCCCTCCCCTCCTCCCACCTTTCCCCCGGCACCACCACA
GATCTGGGACATGTACAAGCAAGCTGAGGCCTCTTTCTGGACGGCGGAGG
AGCTGGACCTGGCCCACGACAAGACTGACTGGGAGAAGCTTTCCGACAAG
GAGCGTCATTTCGTCTCGCACGTCCTCGCCTTCTTCGCCGCGTCCGATGG
GATCGTTAACGAAAACCTGGCCTTGAACTTCTCCAACGAGATTCAGCTGC
CGGTGCGTGCTACGGATCTATCGTTTGATTGAGTCATGACCCCACCCCCC
TCCCTCTTTCTGTGTTGGCGTCTTCGTCGTTGTCTCACTCCCACCTCCCC
CTCCTTCCCTCCTTCCCGCGCTCCCCCCCCCACCTCGACTGCACAGGAGG
CCCGCTGCTTCTACGGCTTCCAGATAGCCATCGAGAACATCCACAGCGAG
GTATACTCCCTCCTCATCGACACGTACATCAAGAACGGTCAAGAGAAGCA
CAAGCTCCTCAATGCCATTGATACTGTGCCTTGTGTCCGTCGGAAGGCGC
AGTGGGCCCTCAGGTGGTGCGACCGGAAGTACGCCTCTTTCGCCGAGCGC
CTGATTGCGTTTGCGGCTGTGGAAGGTATATTTTTCAGTGGGTCGTTCTG
CTCGATATTCTGGCTGAAGAAGAGGGGTTTGATGCCGGTAGGTGGGGAGT
GGGGAGGGGAGGGGGGAGGGAGGGAAGGCGGGAAGGAGGGAGGGCTGAAT
TGACGACCTTTGTTACCAAGCTGTCTTGTTTTCAATGTATGTATGAATCT
AAACCTTTCCTTTCTCCCCTCCCCCCTCCCTCCCTACCTCAGGGGCTCTC
CTTCTCGAACGAGCTCATCTCCCGCGACGAGGGTTTGCACTGTGACTTCG
CCTGCCTCCTATACAGCAAGTGCAGCATCAAGTGCCCGGAGGAGCGTGTG
GTGGACATCATCAAGGACGCGGTGGCCATCGAGAAGGAATTCATCACCGA
TGCCCTGCCCGTGGAGCTGATTGGGATGAATAGGTGAGTCCTGTCTCCCT
CCCTCCCTCCCTTTCTCTTTCCCGCCCTCCCTCCCACCCTAAGGGTTTAC
CGAGGAGGCTGCCCCTGCCGTATAGATCACTTTTCCTCCTCACCCTCCCT
CTCTCCCTCCCTCCCTCCTTTATAGCCGCCTCATGTGCGACTACATCGAG
TTCTGCGCCGACCGGCTCCTTTTGTCGTTGGGCTGCTCCAAGGCGTACCA
TACCCGGAACCCGTTTGACTGGATGGACCTCATCTCCTTGCAGGTAGGAA
GGGAGGGAGGGAGGAATGGAAAGAAGGGAGGGTGTGAAGGAGTGCCTCTT
TCGTATTCCATACTGCCGAACTCCGAGGCAACTTACCCACCACCCCGTTT
CTCTTTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCCACAGGGCAAGACCA
ACTTTTTCGAGAAGCGCGTGGGGGAGTACGCGAAAAGCGGCGTCGGTGGA
AATGTTGAGGACCAGGTTTTCTCTCTGGAGGCCGAGTTCTAA back to topCoding sequence (CDS) from alignment at scaffold_4:1181316..1183457- >mRNA_2254 ID=mRNA_2254|Name=jgi.p|Nanoce1779_2|524768|organism=Nannochloropsis oceanica|type=CDS|length=6480bp|location=Sequence derived from alignment at scaffold_4:1181316..1183457- (Nannochloropsis oceanica)
GGCAAGACCAACTTTTTCGAGAAGCGCGTGGGGGAGTACGCGAAAAGCGG
CGTCGGTGGAAATGTTGAGGACCAGGTTTTCTCTCTGGAGGCCGAGTTCT
AACCGCCTCATGTGCGACTACATCGAGTTCTGCGCCGACCGGCTCCTTTT
GTCGTTGGGCTGCTCCAAGGCGTACCATACCCGGAACCCGTTTGACTGGA
TGGACCTCATCTCCTTGCAGGGGCTCTCCTTCTCGAACGAGCTCATCTCC
CGCGACGAGGGTTTGCACTGTGACTTCGCCTGCCTCCTATACAGCAAGTG
CAGCATCAAGTGCCCGGAGGAGCGTGTGGTGGACATCATCAAGGACGCGG
TGGCCATCGAGAAGGAATTCATCACCGATGCCCTGCCCGTGGAGCTGATT
GGGATGAATAGGAGGCCCGCTGCTTCTACGGCTTCCAGATAGCCATCGAG
AACATCCACAGCGAGGTATACTCCCTCCTCATCGACACGTACATCAAGAA
CGGTCAAGAGAAGCACAAGCTCCTCAATGCCATTGATACTGTGCCTTGTG
TCCGTCGGAAGGCGCAGTGGGCCCTCAGGTGGTGCGACCGGAAGTACGCC
TCTTTCGCCGAGCGCCTGATTGCGTTTGCGGCTGTGGAAGGTATATTTTT
CAGTGGGTCGTTCTGCTCGATATTCTGGCTGAAGAAGAGGGGTTTGATGC
CGATCTGGGACATGTACAAGCAAGCTGAGGCCTCTTTCTGGACGGCGGAG
GAGCTGGACCTGGCCCACGACAAGACTGACTGGGAGAAGCTTTCCGACAA
GGAGCGTCATTTCGTCTCGCACGTCCTCGCCTTCTTCGCCGCGTCCGATG
GGATCGTTAACGAAAACCTGGCCTTGAACTTCTCCAACGAGATTCAGCTG
CCGATGGAGCAGAAATTGTCCCTGGCCAGCAAGAGCGCCGCCGCCGCCCT
GCCGGACGAAGAGCTCGTGCTTAAGCCTTCTGAGATGAAGCTGCGTGAGC
TAGCAGGCGAGATGGACAACGAGCTCCTCCTAAAGGATAATCCGGGCCGC
TATGTCATCTTCCCCATTCAGCACCAGGATGGCAAGACCAACTTTTTCGA
GAAGCGCGTGGGGGAGTACGCGAAAAGCGGCGTCGGTGGAAATGTTGAGG
ACCAGGTTTTCTCTCTGGAGGCCGAGTTCTAACCGCCTCATGTGCGACTA
CATCGAGTTCTGCGCCGACCGGCTCCTTTTGTCGTTGGGCTGCTCCAAGG
CGTACCATACCCGGAACCCGTTTGACTGGATGGACCTCATCTCCTTGCAG
GGGCTCTCCTTCTCGAACGAGCTCATCTCCCGCGACGAGGGTTTGCACTG
TGACTTCGCCTGCCTCCTATACAGCAAGTGCAGCATCAAGTGCCCGGAGG
AGCGTGTGGTGGACATCATCAAGGACGCGGTGGCCATCGAGAAGGAATTC
ATCACCGATGCCCTGCCCGTGGAGCTGATTGGGATGAATAGGAGGCCCGC
TGCTTCTACGGCTTCCAGATAGCCATCGAGAACATCCACAGCGAGGTATA
CTCCCTCCTCATCGACACGTACATCAAGAACGGTCAAGAGAAGCACAAGC
TCCTCAATGCCATTGATACTGTGCCTTGTGTCCGTCGGAAGGCGCAGTGG
GCCCTCAGGTGGTGCGACCGGAAGTACGCCTCTTTCGCCGAGCGCCTGAT
TGCGTTTGCGGCTGTGGAAGGTATATTTTTCAGTGGGTCGTTCTGCTCGA
TATTCTGGCTGAAGAAGAGGGGTTTGATGCCGATCTGGGACATGTACAAG
CAAGCTGAGGCCTCTTTCTGGACGGCGGAGGAGCTGGACCTGGCCCACGA
CAAGACTGACTGGGAGAAGCTTTCCGACAAGGAGCGTCATTTCGTCTCGC
ACGTCCTCGCCTTCTTCGCCGCGTCCGATGGGATCGTTAACGAAAACCTG
GCCTTGAACTTCTCCAACGAGATTCAGCTGCCGATGGAGCAGAAATTGTC
CCTGGCCAGCAAGAGCGCCGCCGCCGCCCTGCCGGACGAAGAGCTCGTGC
TTAAGCCTTCTGAGATGAAGCTGCGTGAGCTAGCAGGCGAGATGGACAAC
GAGCTCCTCCTAAAGGATAATCCGGGCCGCTATGTCATCTTCCCCATTCA
GCACCAGGATGGCAAGACCAACTTTTTCGAGAAGCGCGTGGGGGAGTACG
CGAAAAGCGGCGTCGGTGGAAATGTTGAGGACCAGGTTTTCTCTCTGGAG
GCCGAGTTCTAACCGCCTCATGTGCGACTACATCGAGTTCTGCGCCGACC
GGCTCCTTTTGTCGTTGGGCTGCTCCAAGGCGTACCATACCCGGAACCCG
TTTGACTGGATGGACCTCATCTCCTTGCAGGGGCTCTCCTTCTCGAACGA
GCTCATCTCCCGCGACGAGGGTTTGCACTGTGACTTCGCCTGCCTCCTAT
ACAGCAAGTGCAGCATCAAGTGCCCGGAGGAGCGTGTGGTGGACATCATC
AAGGACGCGGTGGCCATCGAGAAGGAATTCATCACCGATGCCCTGCCCGT
GGAGCTGATTGGGATGAATAGGAGGCCCGCTGCTTCTACGGCTTCCAGAT
AGCCATCGAGAACATCCACAGCGAGGTATACTCCCTCCTCATCGACACGT
ACATCAAGAACGGTCAAGAGAAGCACAAGCTCCTCAATGCCATTGATACT
GTGCCTTGTGTCCGTCGGAAGGCGCAGTGGGCCCTCAGGTGGTGCGACCG
GAAGTACGCCTCTTTCGCCGAGCGCCTGATTGCGTTTGCGGCTGTGGAAG
GTATATTTTTCAGTGGGTCGTTCTGCTCGATATTCTGGCTGAAGAAGAGG
GGTTTGATGCCGATCTGGGACATGTACAAGCAAGCTGAGGCCTCTTTCTG
GACGGCGGAGGAGCTGGACCTGGCCCACGACAAGACTGACTGGGAGAAGC
TTTCCGACAAGGAGCGTCATTTCGTCTCGCACGTCCTCGCCTTCTTCGCC
GCGTCCGATGGGATCGTTAACGAAAACCTGGCCTTGAACTTCTCCAACGA
GATTCAGCTGCCGATGGAGCAGAAATTGTCCCTGGCCAGCAAGAGCGCCG
CCGCCGCCCTGCCGGACGAAGAGCTCGTGCTTAAGCCTTCTGAGATGAAG
CTGCGTGAGCTAGCAGGCGAGATGGACAACGAGCTCCTCCTAAAGGATAA
TCCGGGCCGCTATGTCATCTTCCCCATTCAGCACCAGGATGGCAAGACCA
ACTTTTTCGAGAAGCGCGTGGGGGAGTACGCGAAAAGCGGCGTCGGTGGA
AATGTTGAGGACCAGGTTTTCTCTCTGGAGGCCGAGTTCTAACCGCCTCA
TGTGCGACTACATCGAGTTCTGCGCCGACCGGCTCCTTTTGTCGTTGGGC
TGCTCCAAGGCGTACCATACCCGGAACCCGTTTGACTGGATGGACCTCAT
CTCCTTGCAGGGGCTCTCCTTCTCGAACGAGCTCATCTCCCGCGACGAGG
GTTTGCACTGTGACTTCGCCTGCCTCCTATACAGCAAGTGCAGCATCAAG
TGCCCGGAGGAGCGTGTGGTGGACATCATCAAGGACGCGGTGGCCATCGA
GAAGGAATTCATCACCGATGCCCTGCCCGTGGAGCTGATTGGGATGAATA
GGAGGCCCGCTGCTTCTACGGCTTCCAGATAGCCATCGAGAACATCCACA
GCGAGGTATACTCCCTCCTCATCGACACGTACATCAAGAACGGTCAAGAG
AAGCACAAGCTCCTCAATGCCATTGATACTGTGCCTTGTGTCCGTCGGAA
GGCGCAGTGGGCCCTCAGGTGGTGCGACCGGAAGTACGCCTCTTTCGCCG
AGCGCCTGATTGCGTTTGCGGCTGTGGAAGGTATATTTTTCAGTGGGTCG
TTCTGCTCGATATTCTGGCTGAAGAAGAGGGGTTTGATGCCGATCTGGGA
CATGTACAAGCAAGCTGAGGCCTCTTTCTGGACGGCGGAGGAGCTGGACC
TGGCCCACGACAAGACTGACTGGGAGAAGCTTTCCGACAAGGAGCGTCAT
TTCGTCTCGCACGTCCTCGCCTTCTTCGCCGCGTCCGATGGGATCGTTAA
CGAAAACCTGGCCTTGAACTTCTCCAACGAGATTCAGCTGCCGATGGAGC
AGAAATTGTCCCTGGCCAGCAAGAGCGCCGCCGCCGCCCTGCCGGACGAA
GAGCTCGTGCTTAAGCCTTCTGAGATGAAGCTGCGTGAGCTAGCAGGCGA
GATGGACAACGAGCTCCTCCTAAAGGATAATCCGGGCCGCTATGTCATCT
TCCCCATTCAGCACCAGGATGGCAAGACCAACTTTTTCGAGAAGCGCGTG
GGGGAGTACGCGAAAAGCGGCGTCGGTGGAAATGTTGAGGACCAGGTTTT
CTCTCTGGAGGCCGAGTTCTAACCGCCTCATGTGCGACTACATCGAGTTC
TGCGCCGACCGGCTCCTTTTGTCGTTGGGCTGCTCCAAGGCGTACCATAC
CCGGAACCCGTTTGACTGGATGGACCTCATCTCCTTGCAGGGGCTCTCCT
TCTCGAACGAGCTCATCTCCCGCGACGAGGGTTTGCACTGTGACTTCGCC
TGCCTCCTATACAGCAAGTGCAGCATCAAGTGCCCGGAGGAGCGTGTGGT
GGACATCATCAAGGACGCGGTGGCCATCGAGAAGGAATTCATCACCGATG
CCCTGCCCGTGGAGCTGATTGGGATGAATAGGAGGCCCGCTGCTTCTACG
GCTTCCAGATAGCCATCGAGAACATCCACAGCGAGGTATACTCCCTCCTC
ATCGACACGTACATCAAGAACGGTCAAGAGAAGCACAAGCTCCTCAATGC
CATTGATACTGTGCCTTGTGTCCGTCGGAAGGCGCAGTGGGCCCTCAGGT
GGTGCGACCGGAAGTACGCCTCTTTCGCCGAGCGCCTGATTGCGTTTGCG
GCTGTGGAAGGTATATTTTTCAGTGGGTCGTTCTGCTCGATATTCTGGCT
GAAGAAGAGGGGTTTGATGCCGATCTGGGACATGTACAAGCAAGCTGAGG
CCTCTTTCTGGACGGCGGAGGAGCTGGACCTGGCCCACGACAAGACTGAC
TGGGAGAAGCTTTCCGACAAGGAGCGTCATTTCGTCTCGCACGTCCTCGC
CTTCTTCGCCGCGTCCGATGGGATCGTTAACGAAAACCTGGCCTTGAACT
TCTCCAACGAGATTCAGCTGCCGATGGAGCAGAAATTGTCCCTGGCCAGC
AAGAGCGCCGCCGCCGCCCTGCCGGACGAAGAGCTCGTGCTTAAGCCTTC
TGAGATGAAGCTGCGTGAGCTAGCAGGCGAGATGGACAACGAGCTCCTCC
TAAAGGATAATCCGGGCCGCTATGTCATCTTCCCCATTCAGCACCAGGAT
GGCAAGACCAACTTTTTCGAGAAGCGCGTGGGGGAGTACGCGAAAAGCGG
CGTCGGTGGAAATGTTGAGGACCAGGTTTTCTCTCTGGAGGCCGAGTTCT
AACCGCCTCATGTGCGACTACATCGAGTTCTGCGCCGACCGGCTCCTTTT
GTCGTTGGGCTGCTCCAAGGCGTACCATACCCGGAACCCGTTTGACTGGA
TGGACCTCATCTCCTTGCAGGGGCTCTCCTTCTCGAACGAGCTCATCTCC
CGCGACGAGGGTTTGCACTGTGACTTCGCCTGCCTCCTATACAGCAAGTG
CAGCATCAAGTGCCCGGAGGAGCGTGTGGTGGACATCATCAAGGACGCGG
TGGCCATCGAGAAGGAATTCATCACCGATGCCCTGCCCGTGGAGCTGATT
GGGATGAATAGGAGGCCCGCTGCTTCTACGGCTTCCAGATAGCCATCGAG
AACATCCACAGCGAGGTATACTCCCTCCTCATCGACACGTACATCAAGAA
CGGTCAAGAGAAGCACAAGCTCCTCAATGCCATTGATACTGTGCCTTGTG
TCCGTCGGAAGGCGCAGTGGGCCCTCAGGTGGTGCGACCGGAAGTACGCC
TCTTTCGCCGAGCGCCTGATTGCGTTTGCGGCTGTGGAAGGTATATTTTT
CAGTGGGTCGTTCTGCTCGATATTCTGGCTGAAGAAGAGGGGTTTGATGC
CGATCTGGGACATGTACAAGCAAGCTGAGGCCTCTTTCTGGACGGCGGAG
GAGCTGGACCTGGCCCACGACAAGACTGACTGGGAGAAGCTTTCCGACAA
GGAGCGTCATTTCGTCTCGCACGTCCTCGCCTTCTTCGCCGCGTCCGATG
GGATCGTTAACGAAAACCTGGCCTTGAACTTCTCCAACGAGATTCAGCTG
CCGATGGAGCAGAAATTGTCCCTGGCCAGCAAGAGCGCCGCCGCCGCCCT
GCCGGACGAAGAGCTCGTGCTTAAGCCTTCTGAGATGAAGCTGCGTGAGC
TAGCAGGCGAGATGGACAACGAGCTCCTCCTAAAGGATAATCCGGGCCGC
TATGTCATCTTCCCCATTCAGCACCAGGAT back to top
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