jgi.p|Nanoce1779_2|524768, gene_2254 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|524768
Unique Namegene_2254
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:1181316..1183457 -

Link to JBrowse

Properties
Property NameValue
TranscriptId524854
ProteinId524768
Product nameFerritin-like superfamily
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:1181316..1183457 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0046914transition metal ion binding
GO:0004748ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
Vocabulary: Biological Process
TermDefinition
GO:0009186deoxyribonucleoside diphosphate metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL058ncniL058Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G04660NO04G04660Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|524768mRNA_2254-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|524768mRNA_2254Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|524768

>mRNA_2254-protein ID=mRNA_2254-protein|Name=jgi.p|Nanoce1779_2|524768|organism=Nannochloropsis oceanica|type=polypeptide|length=360bp
MEQKLSLASKSAAAALPDEELVLKPSEMKLRELAGEMDNELLLKDNPGRY
VIFPIQHQDIWDMYKQAEASFWTAEELDLAHDKTDWEKLSDKERHFVSHV
LAFFAASDGIVNENLALNFSNEIQLPEARCFYGFQIAIENIHSEVYSLLI
DTYIKNGQEKHKLLNAIDTVPCVRRKAQWALRWCDRKYASFAERLIAFAA
VEGIFFSGSFCSIFWLKKRGLMPGLSFSNELISRDEGLHCDFACLLYSKC
SIKCPEERVVDIIKDAVAIEKEFITDALPVELIGMNSRLMCDYIEFCADR
LLLSLGCSKAYHTRNPFDWMDLISLQGKTNFFEKRVGEYAKSGVGGNVED
QVFSLEAEF*
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Synonyms
Publications