jgi.p|Nanoce1779_2|660214, mRNA_2236 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|660214
Unique Name	mRNA_2236
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	5897
Alignment location	scaffold_4:1134757..1140653 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	660300
Track	FilteredModels2
ProteinId	660214

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_4	supercontig	scaffold_4:1134757..1140653 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|660214	gene_2236	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|660214	mRNA_2236-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_2236	CDS_2236	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_4:1134757..1140653+
coding sequence from alignment at scaffold_4:1134757..1140653+

mRNA sequence

>mRNA_2236 ID=mRNA_2236|Name=jgi.p|Nanoce1779_2|660214|organism=Nannochloropsis oceanica|type=mRNA|length=5897bp
CGCTTCGCAGGTTGCCGTTTCTTCCATTTCCCTGTGCGCAGCTTTTTCGC
ACATAGCCGCATCATTTTGGGTGCCTTATGGTGCTTTGTTCTAGATTTTT
TAACATTTCTGACTTGATAATCGCCTTTATTCTGCCAGCCACAGGCACGA
CTTTGTCAGGTCATGAAGGCGGCCACGACTACCAGCAGGATAAAAAGACA
AGGGCCGGCCTCGCCATTGCCTCCCCAAGCCCAAGCCCACCCACGCGGCC
TCGTACTTAGCACGCCACTTTCTTCCTCCTCTTCCTCCTCCTCTTCCTCC
TCCTCTTCTTTCTCCTCTGAAAACTCGCACTACGACGATCAGCATGACGA
GGCATCAGATTTCACCTCCCCACTGAGCTTGTCGACGGCCTTGTTGCCCC
GGCAACATCATGCGGCAGCTTTCGGGGACCAAAAGTTTTGTGGATTCACA
TTCAACTTTAGCAATAATGTGCCAGGTATGCTCTATCGCTCTCGCAATGA
TCCGTGCAGCATGACTTGTCCCTTGAAGAATATTCCCCACCACACGCCGG
ACTGCAGTCAGCAAGACAAGAGCGAGCACCCTCGCGACCAGGGCACCACT
GCGGCTGGCAACATAACCCGGGAAGCAAGCGGCAGCAATGACGCTCTATT
CGATGGTGACGATGCAGGCTTCGCTTTCGGCGACGTGGTGGGGACGGTGG
CGCTTGAGAAGCTTGATTTGCGGCAGCGGATGGCCTTGACATTGCGAAAT
TGGTGCATGGACGAAGACAATATGGCCCTCATTGCTCGCGAAGGCGCCAT
CCAAGCGCTGGCTGCACTTGCCTCCCGTGATGATAGCCTGACGCGCCGAT
TTTGTGCGGCTGCCTTCTATTCCCTCTCCCATAATCCTAATTTCCGGGCG
GAGTTGGTTCAAGTGGGTGCATGCGCTATCATTGCCCAGGTGGCTCTCAA
TACAAAGAGCCCTCGGGTGGCCTTGTCATGTGCGGCCTCCCTCTGCAACC
TGTCGCTGGAGTCCGGTACGGAGCCGCGCTTGGCAGAGGAAGGGGCTGTT
GGTGCGCTATGCACATTGCTTCTGACGTTTTCTGAACGCGACATATGGAT
CACAAGCTTGCAAGGGCTTTACAATTTGACCTGTGTCACGGAGAGCTACC
AGGGTCTGGATCGCGTCCTAAAGGGTTTATTTTCCGCATATGACACGCCC
TGCCAGGAGATGGATCCCTCTCAGGTTGTGGGCCGCGCCATCGCCAACCT
AAGTGTCATTTACCGCATGCGGCTTCGGATTCTGGAGGAAGGACTTGTGG
ACGTCGTGAAGCGCCACATTTTCCCCTTTGCAGACGGAGTCTTGCAGTAT
AATGTGGCTGTAGCGTTCCATAACGTTGCGTGTGCCCAGACATGTAGCAG
TGAAATGATCAACCGCGGTGTGATGGCGTGCATTGTTTCTCTAACACGAC
CACCTTCTAAGAGTAACAGCTGTACCAGCATGTTTATCAGTGGCACTGTG
AACAAGGACGACGAGGAGCAGAGAATACTGTCACAACAGCCCCAGCAGCA
CAATCTTCCTCTGCTAACTTGCCTTGCAACTACTCTGCAGTACCTGAGTC
TAGAAGTGGAGGCCAGACGTACAACAATTCGAGACGGCGCCGTCCGAGCC
ATCCTCAACATCCTGGAGCAAACGTCCGACCATACTGTTTTAGAGGGGTG
CGCTGAGGCATTGCATGCTTTCACGTCCTTTCAAGACAGTACACTTTTGC
TGATCAAGCACCAGACGGTTCCCGCTCTAATCAAGCTGAGCGATACTTTG
TTGGCCTCGAGAGATCCAAAACGCCGGCGGCAAAGGCACAGCGTCGTAGC
CAGCTTTTGCAATCTGTTGAGCGCTGAAAACCACCACAGTTCTGTTCTCG
ACTACAAAAATTGTCTTACATGTGTATTACGCCTAGCAGAATGTCTTGAA
AGCGGCGACGAGGACAATGGTTGCAGCGACGATGAAATCCTGTTGGAGTA
CCTGTCCTGCTTGTATAGCAATTTAGCATGTGGCACTCCGCGGCGTTTCC
ATGCTGTCATGGCGGGATTAGTGCCACGCCTTGTGCAATTGTGTGATTTA
GAAGCCCCATCAGCCGTCAGCGTCAATCTCAAAGCTCGGTGTGCCACGGC
CTTGGCCAACCTTATGGCCATCGCCACAACTGATGGCAATATCAGCAGTG
GCAGCCTCAATAAGAGCAACAGCAGTAGCGGTGAAATCAGCACAACCAAC
GTCGTGAGTGCCAACAAGCAGGGGGATAACAACAATTTATTCTTGAAGCG
CATGGTGCAAGACGGCGTTGTAGGCTGCCTTACCCGCCTGTTGGTGGCTG
CGACTGATGAGGTACTGTTGGAAAGCGTTACAACTGCGCTAGCACTCACT
TCATTTCATAACGACGATATCAAGGCAGAGATGATCAATCAAGGAGTTGT
ACATGCGCTCATCCACGCCGTTACAGATGAAGGACTTAGAGGGGATAAGA
CCCAGCATGCGGCGGCAGCCATCTTTGCGTCGCTCTCGTACTCGGCGCAG
CACATTCCCCACCTTTTCGACGCCGGGATCTTGGATGCCATCTTCTTACT
CGCCAGGAAAGAAGAGATAGCCACACGGAAGCGCTGCGCCACGGTCCTTT
GCAACCTATCCTTTGATCCTCATGTGCGCAATCACATGGTGGAACGCAAT
GTGGTGCTGCTTCTTGCCCAACTCTCTAATATGTACAGCGATGAAACGCA
GATGGACTGTGCCTGGTGTTTTCACAACTTAGCTTGCAGCAGTGGGTCTG
AAGCCGAGGCAGTAGCGCGTACGACGCTTAACCGAGACATCATGGTGAAT
CAAGGAGCTGTGGGTGCATTGCTCATGATTGCGTTGGTCCGCGCCGTCAC
AACGAAAACTCGAGAGGTGTGTGCGCGGGCCCTACTGAACCTGATCACGG
AGGAAACAACTGCGAAAGTCATCGACTGTGGCATCACCCAAGGGCTGGCC
TCACTGTGTGGGCTTGACTCGGAAGTGTGTTTGAAGATTTGCGCACAGGC
TTTTTGGACCTTGTCGTTGCATCCCATCGGCAGGGCCAAGATCGCGTCGA
AGAGGAATAGTATGCAAGGGCTCTGCAGCCTGATCCGGTCTAACGTCATT
ACCACTCGTACTTTATGTGGTGCGGCGGTCCTAAATCTTTTGCTACTGGA
GGCAGACACCGCCGTGCTTGCGACCGAGGCCGGGGCTCTGGGCGTCGTCA
AGGTCATGTGCACGTCGGGTGATGCCGCCGTCCAAATCGTATGCGCCCAT
GCCGTCGCCAAGATTGCTCTGCTTGCTGCCTGCCGCGCGCACATGCCCAA
GGAATCCATCCCGCAGGCGATGGTCCTCTTGGCGCAGCAAAATCAGGACG
AGGCAACAGCAGTGGCAGCGCTGCGTGCGCTGACCTGCCTCGCTCTGTCT
CATTTCCCCTTGACGGTGCTGCTCCAAGCCGGTATTCTCCATGTCGTAAT
GTTTCGAGTCTTGTCGAGCGGTTTTTTGGGTACTGATGTCGACAGTGATG
AATGTAGTAATAGTCATTGCGAGTTGAAGGACGGAGACAGAAGAAGAAGT
CACAGTGGAACTAGTGGCAGGGATGTCATCGAGTGTTGTATCTATATTCT
GCATCGATTTGCTCTAAGCAAGGAGCTCCGACAGGCCATGACCAAAACGC
AGGTTGTATGTGCGATCGTTGTCCTATTGCGACGGTTGGGCACGGGGAAG
GTAGAGAAGCCGCACCAAGCACCTAAAACCTTGCTGCTCGAGACCATGCT
GGCAACGACACTGGAGCGGCTTTCATGGATTCCAGCGTCACAACACCATA
TAGTCGAAGACGGGGGGATGTTAGCTTTGGTACAGCTAGTCAAGCAACAA
CAAGATGCACCGCCGCCTTACGGTGCGCGATTAGCCAAAAGCATTGCCAT
AGTTTTTGCCAACTTGGCCCGGACAGAGGGGCATCGCTTGCATCTCGTGT
CCGTGGGTGTCATAGAGGCATTGACAATCGTTCTAAAAAAAGGATTCCTT
CTGGGGGATGGGATAACAGACAAGAAAGATGTGGTCGTATGGCGTACGGT
GCTGGGTTTGCTACAGCTGAGCGAGTCATCGGATGATTTGCTGGTGGCGA
TGGCCCTTAACGGCGCACTCGAGCTTCTTGTCTTCATCATCTTGTCGGCA
TCGGGCAAAGTTGGAGAGCGGAGAGAAGTCCTGCAACGGTATGCATCGGG
AGCACTATGCAATTTTTCATATTGCCAAGAGTGTCGCCCCCTACTGGCAG
CACAAGACGGCGCGGTGGAGGCCATCATGAATTTGTCCAAGTCGCCCAAC
GCAGCTATCCAACGTCATTGTAGCATCATGATCTCCAACCTTTCGGCCCA
GCAGCACGCCAAACTTCGAGTAGGCGCTGTAGGAACGCTGGTGAACCTCT
TCAAGTCCCAGGACCGACATGAAAAGACAAACCCCTCCCTAGAAGGAGGC
AGGGAGAACAAAAAGGGCGCCATCCAAGCAAAATTTCGCCGTCTGCTCAT
GGCCGCAACATTGGCGAAGGAGTTGAAGGACGGTACCAAGGAGACCGCAG
CTGGAGCGACAGGTTCGGCGGCAGAGCACAACATCAACCGCGCCTCCGGG
GTTGGGACTGAAGGAGAGGATGCGGAGAAGAAGACACAGGATGGACGAGA
CGACTGCGAGATATCCGACGGAGAAAAAGACGTTGTCGAAGATGAAGGTA
CTGAAGATGAGGAAAAGAATTGGCATGCCTACCACAGTCGTGCTACCCAT
TTCAGTGGCGGCCTTCCCACCACACGCTTGATGGATACGGTCGGTCTGGT
TAAACAGCAGCAACACGCAAGACTGGCCTCTTGGGACATGATCCCACCGG
CCCATGAGACTGTCTTCTACATGTGCACTCATTCCGGAGCGTTCAGCGGT
GGAGTATCACCTATCTTGTCGGCAAGCACTAGTGTATCCACGCCCTTAAT
GCACATGGATTCCTCGTCAATGTCTGGCCAGCAGGGAGATAGCCCTTCTT
CTCCCACGTCTTCGTCTTCTTCTACATTGCCGTCAATCTTGTCTCAGACC
ACTTCCTCTTATCGAGTCCGAAATGTCATTGCCGTTAGCCACCCGAAACT
GAGAGAATGTCCCGTTCTACGGCCGAGACAAGCAGAAAAGTTGAAAGGCG
CCTCGACGACTACAGTGGTCTATTTTATGGAACGACGCAAGAGCAGCTAC
TTGTCAGCGGCCAGCAATGGGACCCTCACATCGGAGGCGACGTCGGCAGC
TGCCAAGGACGATCCAATTTACGAGCCAACCTTCGAGGAGAAACTGGCCT
CACGCATGGAGGACGCGGCAGTGACGAAGGCTGTCAAATGGTTGAGTGAT
TCCTCGTCGAGGTCCACCTCAAGACCATCATATCCTCTTACTCCAAAGCA
CATGACCATCAAGTCTGACACTTGTTTGGCCCCTCTAACGCATCCTATGT
CTCCGTCATCCTCCACAAAAGCCAATATAGTGAGCTTGAGTCCGGCAAAA
GGTCTCCGAGAGCAATCTCTCGTGACTCAAGCGCAAGACTCACCGTCAGC
CCCGGCGCCATCACCGTTGCTCCCGTCGCCGGTGGCCATGGAGCCACAAA
AGCCAGAGGAAAATATAACAGCGGCACCGATCTCTTCTTCTCCACGTACG
TCTTTGTCAGCGTGCCGTGTCACCAAAAAGGGCGACCTGACCTTGCTAGA
AGAAGCTTTCTCATATTGCGGCGGAGGACAGGAGAAGATTGTAGATGGAA
AGATGAAGCACTAGAAATGAGGGAGGCATGTACACTTATACGACAAAAGA
AACAGGTTATCGTGGGGAACTAAGGGTAACACAAAAAAGAAGCGCAA

protein sequence of jgi.p|Nanoce1779_2|660214

>mRNA_2236-protein ID=mRNA_2236-protein|Name=jgi.p|Nanoce1779_2|660214|organism=Nannochloropsis oceanica|type=polypeptide|length=1884bp
MKAATTTSRIKRQGPASPLPPQAQAHPRGLVLSTPLSSSSSSSSSSSSSF
SSENSHYDDQHDEASDFTSPLSLSTALLPRQHHAAAFGDQKFCGFTFNFS
NNVPGMLYRSRNDPCSMTCPLKNIPHHTPDCSQQDKSEHPRDQGTTAAGN
ITREASGSNDALFDGDDAGFAFGDVVGTVALEKLDLRQRMALTLRNWCMD
EDNMALIAREGAIQALAALASRDDSLTRRFCAAAFYSLSHNPNFRAELVQ
VGACAIIAQVALNTKSPRVALSCAASLCNLSLESGTEPRLAEEGAVGALC
TLLLTFSERDIWITSLQGLYNLTCVTESYQGLDRVLKGLFSAYDTPCQEM
DPSQVVGRAIANLSVIYRMRLRILEEGLVDVVKRHIFPFADGVLQYNVAV
AFHNVACAQTCSSEMINRGVMACIVSLTRPPSKSNSCTSMFISGTVNKDD
EEQRILSQQPQQHNLPLLTCLATTLQYLSLEVEARRTTIRDGAVRAILNI
LEQTSDHTVLEGCAEALHAFTSFQDSTLLLIKHQTVPALIKLSDTLLASR
DPKRRRQRHSVVASFCNLLSAENHHSSVLDYKNCLTCVLRLAECLESGDE
DNGCSDDEILLEYLSCLYSNLACGTPRRFHAVMAGLVPRLVQLCDLEAPS
AVSVNLKARCATALANLMAIATTDGNISSGSLNKSNSSSGEISTTNVVSA
NKQGDNNNLFLKRMVQDGVVGCLTRLLVAATDEVLLESVTTALALTSFHN
DDIKAEMINQGVVHALIHAVTDEGLRGDKTQHAAAAIFASLSYSAQHIPH
LFDAGILDAIFLLARKEEIATRKRCATVLCNLSFDPHVRNHMVERNVVLL
LAQLSNMYSDETQMDCAWCFHNLACSSGSEAEAVARTTLNRDIMVNQGAV
GALLMIALVRAVTTKTREVCARALLNLITEETTAKVIDCGITQGLASLCG
LDSEVCLKICAQAFWTLSLHPIGRAKIASKRNSMQGLCSLIRSNVITTRT
LCGAAVLNLLLLEADTAVLATEAGALGVVKVMCTSGDAAVQIVCAHAVAK
IALLAACRAHMPKESIPQAMVLLAQQNQDEATAVAALRALTCLALSHFPL
TVLLQAGILHVVMFRVLSSGFLGTDVDSDECSNSHCELKDGDRRRSHSGT
SGRDVIECCIYILHRFALSKELRQAMTKTQVVCAIVVLLRRLGTGKVEKP
HQAPKTLLLETMLATTLERLSWIPASQHHIVEDGGMLALVQLVKQQQDAP
PPYGARLAKSIAIVFANLARTEGHRLHLVSVGVIEALTIVLKKGFLLGDG
ITDKKDVVVWRTVLGLLQLSESSDDLLVAMALNGALELLVFIILSASGKV
GERREVLQRYASGALCNFSYCQECRPLLAAQDGAVEAIMNLSKSPNAAIQ
RHCSIMISNLSAQQHAKLRVGAVGTLVNLFKSQDRHEKTNPSLEGGRENK
KGAIQAKFRRLLMAATLAKELKDGTKETAAGATGSAAEHNINRASGVGTE
GEDAEKKTQDGRDDCEISDGEKDVVEDEGTEDEEKNWHAYHSRATHFSGG
LPTTRLMDTVGLVKQQQHARLASWDMIPPAHETVFYMCTHSGAFSGGVSP
ILSASTSVSTPLMHMDSSSMSGQQGDSPSSPTSSSSSTLPSILSQTTSSY
RVRNVIAVSHPKLRECPVLRPRQAEKLKGASTTTVVYFMERRKSSYLSAA
SNGTLTSEATSAAAKDDPIYEPTFEEKLASRMEDAAVTKAVKWLSDSSSR
STSRPSYPLTPKHMTIKSDTCLAPLTHPMSPSSSTKANIVSLSPAKGLRE
QSLVTQAQDSPSAPAPSPLLPSPVAMEPQKPEENITAAPISSSPRTSLSA
CRVTKKGDLTLLEEAFSYCGGGQEKIVDGKMKH*

mRNA from alignment at scaffold_4:1134757..1140653+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_2236 ID=mRNA_2236|Name=jgi.p|Nanoce1779_2|660214|organism=Nannochloropsis oceanica|type=mRNA|length=5897bp|location=Sequence derived from alignment at scaffold_4:1134757..1140653+ (Nannochloropsis oceanica)
CGCTTCGCAGGTTGCCGTTTCTTCCATTTCCCTGTGCGCAGCTTTTTCGC
ACATAGCCGCATCATTTTGGGTGCCTTATGGTGCTTTGTTCTAGATTTTT
TAACATTTCTGACTTGATAATCGCCTTTATTCTGCCAGCCACAGGCACGA
CTTTGTCAGGTCATGAAGGCGGCCACGACTACCAGCAGGATAAAAAGACA
AGGGCCGGCCTCGCCATTGCCTCCCCAAGCCCAAGCCCACCCACGCGGCC
TCGTACTTAGCACGCCACTTTCTTCCTCCTCTTCCTCCTCCTCTTCCTCC
TCCTCTTCTTTCTCCTCTGAAAACTCGCACTACGACGATCAGCATGACGA
GGCATCAGATTTCACCTCCCCACTGAGCTTGTCGACGGCCTTGTTGCCCC
GGCAACATCATGCGGCAGCTTTCGGGGACCAAAAGTTTTGTGGATTCACA
TTCAACTTTAGCAATAATGTGCCAGGTATGCTCTATCGCTCTCGCAATGA
TCCGTGCAGCATGACTTGTCCCTTGAAGAATATTCCCCACCACACGCCGG
ACTGCAGTCAGCAAGACAAGAGCGAGCACCCTCGCGACCAGGGCACCACT
GCGGCTGGCAACATAACCCGGGAAGCAAGCGGCAGCAATGACGCTCTATT
CGATGGTGACGATGCAGGCTTCGCTTTCGGCGACGTGGTGGGGACGGTGG
CGCTTGAGAAGCTTGATTTGCGGCAGCGGATGGCCTTGACATTGCGAAAT
TGGTGCATGGACGAAGACAATATGGCCCTCATTGCTCGCGAAGGCGCCAT
CCAAGCGCTGGCTGCACTTGCCTCCCGTGATGATAGCCTGACGCGCCGAT
TTTGTGCGGCTGCCTTCTATTCCCTCTCCCATAATCCTAATTTCCGGGCG
GAGTTGGTTCAAGTGGGTGCATGCGCTATCATTGCCCAGGTGGCTCTCAA
TACAAAGAGCCCTCGGGTGGCCTTGTCATGTGCGGCCTCCCTCTGCAACC
TGTCGCTGGAGTCCGGTACGGAGCCGCGCTTGGCAGAGGAAGGGGCTGTT
GGTGCGCTATGCACATTGCTTCTGACGTTTTCTGAACGCGACATATGGAT
CACAAGCTTGCAAGGGCTTTACAATTTGACCTGTGTCACGGAGAGCTACC
AGGGTCTGGATCGCGTCCTAAAGGGTTTATTTTCCGCATATGACACGCCC
TGCCAGGAGATGGATCCCTCTCAGGTTGTGGGCCGCGCCATCGCCAACCT
AAGTGTCATTTACCGCATGCGGCTTCGGATTCTGGAGGAAGGACTTGTGG
ACGTCGTGAAGCGCCACATTTTCCCCTTTGCAGACGGAGTCTTGCAGTAT
AATGTGGCTGTAGCGTTCCATAACGTTGCGTGTGCCCAGACATGTAGCAG
TGAAATGATCAACCGCGGTGTGATGGCGTGCATTGTTTCTCTAACACGAC
CACCTTCTAAGAGTAACAGCTGTACCAGCATGTTTATCAGTGGCACTGTG
AACAAGGACGACGAGGAGCAGAGAATACTGTCACAACAGCCCCAGCAGCA
CAATCTTCCTCTGCTAACTTGCCTTGCAACTACTCTGCAGTACCTGAGTC
TAGAAGTGGAGGCCAGACGTACAACAATTCGAGACGGCGCCGTCCGAGCC
ATCCTCAACATCCTGGAGCAAACGTCCGACCATACTGTTTTAGAGGGGTG
CGCTGAGGCATTGCATGCTTTCACGTCCTTTCAAGACAGTACACTTTTGC
TGATCAAGCACCAGACGGTTCCCGCTCTAATCAAGCTGAGCGATACTTTG
TTGGCCTCGAGAGATCCAAAACGCCGGCGGCAAAGGCACAGCGTCGTAGC
CAGCTTTTGCAATCTGTTGAGCGCTGAAAACCACCACAGTTCTGTTCTCG
ACTACAAAAATTGTCTTACATGTGTATTACGCCTAGCAGAATGTCTTGAA
AGCGGCGACGAGGACAATGGTTGCAGCGACGATGAAATCCTGTTGGAGTA
CCTGTCCTGCTTGTATAGCAATTTAGCATGTGGCACTCCGCGGCGTTTCC
ATGCTGTCATGGCGGGATTAGTGCCACGCCTTGTGCAATTGTGTGATTTA
GAAGCCCCATCAGCCGTCAGCGTCAATCTCAAAGCTCGGTGTGCCACGGC
CTTGGCCAACCTTATGGCCATCGCCACAACTGATGGCAATATCAGCAGTG
GCAGCCTCAATAAGAGCAACAGCAGTAGCGGTGAAATCAGCACAACCAAC
GTCGTGAGTGCCAACAAGCAGGGGGATAACAACAATTTATTCTTGAAGCG
CATGGTGCAAGACGGCGTTGTAGGCTGCCTTACCCGCCTGTTGGTGGCTG
CGACTGATGAGGTACTGTTGGAAAGCGTTACAACTGCGCTAGCACTCACT
TCATTTCATAACGACGATATCAAGGCAGAGATGATCAATCAAGGAGTTGT
ACATGCGCTCATCCACGCCGTTACAGATGAAGGACTTAGAGGGGATAAGA
CCCAGCATGCGGCGGCAGCCATCTTTGCGTCGCTCTCGTACTCGGCGCAG
CACATTCCCCACCTTTTCGACGCCGGGATCTTGGATGCCATCTTCTTACT
CGCCAGGAAAGAAGAGATAGCCACACGGAAGCGCTGCGCCACGGTCCTTT
GCAACCTATCCTTTGATCCTCATGTGCGCAATCACATGGTGGAACGCAAT
GTGGTGCTGCTTCTTGCCCAACTCTCTAATATGTACAGCGATGAAACGCA
GATGGACTGTGCCTGGTGTTTTCACAACTTAGCTTGCAGCAGTGGGTCTG
AAGCCGAGGCAGTAGCGCGTACGACGCTTAACCGAGACATCATGGTGAAT
CAAGGAGCTGTGGGTGCATTGCTCATGATTGCGTTGGTCCGCGCCGTCAC
AACGAAAACTCGAGAGGTGTGTGCGCGGGCCCTACTGAACCTGATCACGG
AGGAAACAACTGCGAAAGTCATCGACTGTGGCATCACCCAAGGGCTGGCC
TCACTGTGTGGGCTTGACTCGGAAGTGTGTTTGAAGATTTGCGCACAGGC
TTTTTGGACCTTGTCGTTGCATCCCATCGGCAGGGCCAAGATCGCGTCGA
AGAGGAATAGTATGCAAGGGCTCTGCAGCCTGATCCGGTCTAACGTCATT
ACCACTCGTACTTTATGTGGTGCGGCGGTCCTAAATCTTTTGCTACTGGA
GGCAGACACCGCCGTGCTTGCGACCGAGGCCGGGGCTCTGGGCGTCGTCA
AGGTCATGTGCACGTCGGGTGATGCCGCCGTCCAAATCGTATGCGCCCAT
GCCGTCGCCAAGATTGCTCTGCTTGCTGCCTGCCGCGCGCACATGCCCAA
GGAATCCATCCCGCAGGCGATGGTCCTCTTGGCGCAGCAAAATCAGGACG
AGGCAACAGCAGTGGCAGCGCTGCGTGCGCTGACCTGCCTCGCTCTGTCT
CATTTCCCCTTGACGGTGCTGCTCCAAGCCGGTATTCTCCATGTCGTAAT
GTTTCGAGTCTTGTCGAGCGGTTTTTTGGGTACTGATGTCGACAGTGATG
AATGTAGTAATAGTCATTGCGAGTTGAAGGACGGAGACAGAAGAAGAAGT
CACAGTGGAACTAGTGGCAGGGATGTCATCGAGTGTTGTATCTATATTCT
GCATCGATTTGCTCTAAGCAAGGAGCTCCGACAGGCCATGACCAAAACGC
AGGTTGTATGTGCGATCGTTGTCCTATTGCGACGGTTGGGCACGGGGAAG
GTAGAGAAGCCGCACCAAGCACCTAAAACCTTGCTGCTCGAGACCATGCT
GGCAACGACACTGGAGCGGCTTTCATGGATTCCAGCGTCACAACACCATA
TAGTCGAAGACGGGGGGATGTTAGCTTTGGTACAGCTAGTCAAGCAACAA
CAAGATGCACCGCCGCCTTACGGTGCGCGATTAGCCAAAAGCATTGCCAT
AGTTTTTGCCAACTTGGCCCGGACAGAGGGGCATCGCTTGCATCTCGTGT
CCGTGGGTGTCATAGAGGCATTGACAATCGTTCTAAAAAAAGGATTCCTT
CTGGGGGATGGGATAACAGACAAGAAAGATGTGGTCGTATGGCGTACGGT
GCTGGGTTTGCTACAGCTGAGCGAGTCATCGGATGATTTGCTGGTGGCGA
TGGCCCTTAACGGCGCACTCGAGCTTCTTGTCTTCATCATCTTGTCGGCA
TCGGGCAAAGTTGGAGAGCGGAGAGAAGTCCTGCAACGGTATGCATCGGG
AGCACTATGCAATTTTTCATATTGCCAAGAGTGTCGCCCCCTACTGGCAG
CACAAGACGGCGCGGTGGAGGCCATCATGAATTTGTCCAAGTCGCCCAAC
GCAGCTATCCAACGTCATTGTAGCATCATGATCTCCAACCTTTCGGCCCA
GCAGCACGCCAAACTTCGAGTAGGCGCTGTAGGAACGCTGGTGAACCTCT
TCAAGTCCCAGGACCGACATGAAAAGACAAACCCCTCCCTAGAAGGAGGC
AGGGAGAACAAAAAGGGCGCCATCCAAGCAAAATTTCGCCGTCTGCTCAT
GGCCGCAACATTGGCGAAGGAGTTGAAGGACGGTACCAAGGAGACCGCAG
CTGGAGCGACAGGTTCGGCGGCAGAGCACAACATCAACCGCGCCTCCGGG
GTTGGGACTGAAGGAGAGGATGCGGAGAAGAAGACACAGGATGGACGAGA
CGACTGCGAGATATCCGACGGAGAAAAAGACGTTGTCGAAGATGAAGGTA
CTGAAGATGAGGAAAAGAATTGGCATGCCTACCACAGTCGTGCTACCCAT
TTCAGTGGCGGCCTTCCCACCACACGCTTGATGGATACGGTCGGTCTGGT
TAAACAGCAGCAACACGCAAGACTGGCCTCTTGGGACATGATCCCACCGG
CCCATGAGACTGTCTTCTACATGTGCACTCATTCCGGAGCGTTCAGCGGT
GGAGTATCACCTATCTTGTCGGCAAGCACTAGTGTATCCACGCCCTTAAT
GCACATGGATTCCTCGTCAATGTCTGGCCAGCAGGGAGATAGCCCTTCTT
CTCCCACGTCTTCGTCTTCTTCTACATTGCCGTCAATCTTGTCTCAGACC
ACTTCCTCTTATCGAGTCCGAAATGTCATTGCCGTTAGCCACCCGAAACT
GAGAGAATGTCCCGTTCTACGGCCGAGACAAGCAGAAAAGTTGAAAGGCG
CCTCGACGACTACAGTGGTCTATTTTATGGAACGACGCAAGAGCAGCTAC
TTGTCAGCGGCCAGCAATGGGACCCTCACATCGGAGGCGACGTCGGCAGC
TGCCAAGGACGATCCAATTTACGAGCCAACCTTCGAGGAGAAACTGGCCT
CACGCATGGAGGACGCGGCAGTGACGAAGGCTGTCAAATGGTTGAGTGAT
TCCTCGTCGAGGTCCACCTCAAGACCATCATATCCTCTTACTCCAAAGCA
CATGACCATCAAGTCTGACACTTGTTTGGCCCCTCTAACGCATCCTATGT
CTCCGTCATCCTCCACAAAAGCCAATATAGTGAGCTTGAGTCCGGCAAAA
GGTCTCCGAGAGCAATCTCTCGTGACTCAAGCGCAAGACTCACCGTCAGC
CCCGGCGCCATCACCGTTGCTCCCGTCGCCGGTGGCCATGGAGCCACAAA
AGCCAGAGGAAAATATAACAGCGGCACCGATCTCTTCTTCTCCACGTACG
TCTTTGTCAGCGTGCCGTGTCACCAAAAAGGGCGACCTGACCTTGCTAGA
AGAAGCTTTCTCATATTGCGGCGGAGGACAGGAGAAGATTGTAGATGGAA
AGATGAAGCACTAGAAATGAGGGAGGCATGTACACTTATACGACAAAAGA
AACAGGTTATCGTGGGGAACTAAGGGTAACACAAAAAAGAAGCGCAA

Coding sequence (CDS) from alignment at scaffold_4:1134757..1140653+

>mRNA_2236 ID=mRNA_2236|Name=jgi.p|Nanoce1779_2|660214|organism=Nannochloropsis oceanica|type=CDS|length=5652bp|location=Sequence derived from alignment at scaffold_4:1134757..1140653+ (Nannochloropsis oceanica)
ATGAAGGCGGCCACGACTACCAGCAGGATAAAAAGACAAGGGCCGGCCTC
GCCATTGCCTCCCCAAGCCCAAGCCCACCCACGCGGCCTCGTACTTAGCA
CGCCACTTTCTTCCTCCTCTTCCTCCTCCTCTTCCTCCTCCTCTTCTTTC
TCCTCTGAAAACTCGCACTACGACGATCAGCATGACGAGGCATCAGATTT
CACCTCCCCACTGAGCTTGTCGACGGCCTTGTTGCCCCGGCAACATCATG
CGGCAGCTTTCGGGGACCAAAAGTTTTGTGGATTCACATTCAACTTTAGC
AATAATGTGCCAGGTATGCTCTATCGCTCTCGCAATGATCCGTGCAGCAT
GACTTGTCCCTTGAAGAATATTCCCCACCACACGCCGGACTGCAGTCAGC
AAGACAAGAGCGAGCACCCTCGCGACCAGGGCACCACTGCGGCTGGCAAC
ATAACCCGGGAAGCAAGCGGCAGCAATGACGCTCTATTCGATGGTGACGA
TGCAGGCTTCGCTTTCGGCGACGTGGTGGGGACGGTGGCGCTTGAGAAGC
TTGATTTGCGGCAGCGGATGGCCTTGACATTGCGAAATTGGTGCATGGAC
GAAGACAATATGGCCCTCATTGCTCGCGAAGGCGCCATCCAAGCGCTGGC
TGCACTTGCCTCCCGTGATGATAGCCTGACGCGCCGATTTTGTGCGGCTG
CCTTCTATTCCCTCTCCCATAATCCTAATTTCCGGGCGGAGTTGGTTCAA
GTGGGTGCATGCGCTATCATTGCCCAGGTGGCTCTCAATACAAAGAGCCC
TCGGGTGGCCTTGTCATGTGCGGCCTCCCTCTGCAACCTGTCGCTGGAGT
CCGGTACGGAGCCGCGCTTGGCAGAGGAAGGGGCTGTTGGTGCGCTATGC
ACATTGCTTCTGACGTTTTCTGAACGCGACATATGGATCACAAGCTTGCA
AGGGCTTTACAATTTGACCTGTGTCACGGAGAGCTACCAGGGTCTGGATC
GCGTCCTAAAGGGTTTATTTTCCGCATATGACACGCCCTGCCAGGAGATG
GATCCCTCTCAGGTTGTGGGCCGCGCCATCGCCAACCTAAGTGTCATTTA
CCGCATGCGGCTTCGGATTCTGGAGGAAGGACTTGTGGACGTCGTGAAGC
GCCACATTTTCCCCTTTGCAGACGGAGTCTTGCAGTATAATGTGGCTGTA
GCGTTCCATAACGTTGCGTGTGCCCAGACATGTAGCAGTGAAATGATCAA
CCGCGGTGTGATGGCGTGCATTGTTTCTCTAACACGACCACCTTCTAAGA
GTAACAGCTGTACCAGCATGTTTATCAGTGGCACTGTGAACAAGGACGAC
GAGGAGCAGAGAATACTGTCACAACAGCCCCAGCAGCACAATCTTCCTCT
GCTAACTTGCCTTGCAACTACTCTGCAGTACCTGAGTCTAGAAGTGGAGG
CCAGACGTACAACAATTCGAGACGGCGCCGTCCGAGCCATCCTCAACATC
CTGGAGCAAACGTCCGACCATACTGTTTTAGAGGGGTGCGCTGAGGCATT
GCATGCTTTCACGTCCTTTCAAGACAGTACACTTTTGCTGATCAAGCACC
AGACGGTTCCCGCTCTAATCAAGCTGAGCGATACTTTGTTGGCCTCGAGA
GATCCAAAACGCCGGCGGCAAAGGCACAGCGTCGTAGCCAGCTTTTGCAA
TCTGTTGAGCGCTGAAAACCACCACAGTTCTGTTCTCGACTACAAAAATT
GTCTTACATGTGTATTACGCCTAGCAGAATGTCTTGAAAGCGGCGACGAG
GACAATGGTTGCAGCGACGATGAAATCCTGTTGGAGTACCTGTCCTGCTT
GTATAGCAATTTAGCATGTGGCACTCCGCGGCGTTTCCATGCTGTCATGG
CGGGATTAGTGCCACGCCTTGTGCAATTGTGTGATTTAGAAGCCCCATCA
GCCGTCAGCGTCAATCTCAAAGCTCGGTGTGCCACGGCCTTGGCCAACCT
TATGGCCATCGCCACAACTGATGGCAATATCAGCAGTGGCAGCCTCAATA
AGAGCAACAGCAGTAGCGGTGAAATCAGCACAACCAACGTCGTGAGTGCC
AACAAGCAGGGGGATAACAACAATTTATTCTTGAAGCGCATGGTGCAAGA
CGGCGTTGTAGGCTGCCTTACCCGCCTGTTGGTGGCTGCGACTGATGAGG
TACTGTTGGAAAGCGTTACAACTGCGCTAGCACTCACTTCATTTCATAAC
GACGATATCAAGGCAGAGATGATCAATCAAGGAGTTGTACATGCGCTCAT
CCACGCCGTTACAGATGAAGGACTTAGAGGGGATAAGACCCAGCATGCGG
CGGCAGCCATCTTTGCGTCGCTCTCGTACTCGGCGCAGCACATTCCCCAC
CTTTTCGACGCCGGGATCTTGGATGCCATCTTCTTACTCGCCAGGAAAGA
AGAGATAGCCACACGGAAGCGCTGCGCCACGGTCCTTTGCAACCTATCCT
TTGATCCTCATGTGCGCAATCACATGGTGGAACGCAATGTGGTGCTGCTT
CTTGCCCAACTCTCTAATATGTACAGCGATGAAACGCAGATGGACTGTGC
CTGGTGTTTTCACAACTTAGCTTGCAGCAGTGGGTCTGAAGCCGAGGCAG
TAGCGCGTACGACGCTTAACCGAGACATCATGGTGAATCAAGGAGCTGTG
GGTGCATTGCTCATGATTGCGTTGGTCCGCGCCGTCACAACGAAAACTCG
AGAGGTGTGTGCGCGGGCCCTACTGAACCTGATCACGGAGGAAACAACTG
CGAAAGTCATCGACTGTGGCATCACCCAAGGGCTGGCCTCACTGTGTGGG
CTTGACTCGGAAGTGTGTTTGAAGATTTGCGCACAGGCTTTTTGGACCTT
GTCGTTGCATCCCATCGGCAGGGCCAAGATCGCGTCGAAGAGGAATAGTA
TGCAAGGGCTCTGCAGCCTGATCCGGTCTAACGTCATTACCACTCGTACT
TTATGTGGTGCGGCGGTCCTAAATCTTTTGCTACTGGAGGCAGACACCGC
CGTGCTTGCGACCGAGGCCGGGGCTCTGGGCGTCGTCAAGGTCATGTGCA
CGTCGGGTGATGCCGCCGTCCAAATCGTATGCGCCCATGCCGTCGCCAAG
ATTGCTCTGCTTGCTGCCTGCCGCGCGCACATGCCCAAGGAATCCATCCC
GCAGGCGATGGTCCTCTTGGCGCAGCAAAATCAGGACGAGGCAACAGCAG
TGGCAGCGCTGCGTGCGCTGACCTGCCTCGCTCTGTCTCATTTCCCCTTG
ACGGTGCTGCTCCAAGCCGGTATTCTCCATGTCGTAATGTTTCGAGTCTT
GTCGAGCGGTTTTTTGGGTACTGATGTCGACAGTGATGAATGTAGTAATA
GTCATTGCGAGTTGAAGGACGGAGACAGAAGAAGAAGTCACAGTGGAACT
AGTGGCAGGGATGTCATCGAGTGTTGTATCTATATTCTGCATCGATTTGC
TCTAAGCAAGGAGCTCCGACAGGCCATGACCAAAACGCAGGTTGTATGTG
CGATCGTTGTCCTATTGCGACGGTTGGGCACGGGGAAGGTAGAGAAGCCG
CACCAAGCACCTAAAACCTTGCTGCTCGAGACCATGCTGGCAACGACACT
GGAGCGGCTTTCATGGATTCCAGCGTCACAACACCATATAGTCGAAGACG
GGGGGATGTTAGCTTTGGTACAGCTAGTCAAGCAACAACAAGATGCACCG
CCGCCTTACGGTGCGCGATTAGCCAAAAGCATTGCCATAGTTTTTGCCAA
CTTGGCCCGGACAGAGGGGCATCGCTTGCATCTCGTGTCCGTGGGTGTCA
TAGAGGCATTGACAATCGTTCTAAAAAAAGGATTCCTTCTGGGGGATGGG
ATAACAGACAAGAAAGATGTGGTCGTATGGCGTACGGTGCTGGGTTTGCT
ACAGCTGAGCGAGTCATCGGATGATTTGCTGGTGGCGATGGCCCTTAACG
GCGCACTCGAGCTTCTTGTCTTCATCATCTTGTCGGCATCGGGCAAAGTT
GGAGAGCGGAGAGAAGTCCTGCAACGGTATGCATCGGGAGCACTATGCAA
TTTTTCATATTGCCAAGAGTGTCGCCCCCTACTGGCAGCACAAGACGGCG
CGGTGGAGGCCATCATGAATTTGTCCAAGTCGCCCAACGCAGCTATCCAA
CGTCATTGTAGCATCATGATCTCCAACCTTTCGGCCCAGCAGCACGCCAA
ACTTCGAGTAGGCGCTGTAGGAACGCTGGTGAACCTCTTCAAGTCCCAGG
ACCGACATGAAAAGACAAACCCCTCCCTAGAAGGAGGCAGGGAGAACAAA
AAGGGCGCCATCCAAGCAAAATTTCGCCGTCTGCTCATGGCCGCAACATT
GGCGAAGGAGTTGAAGGACGGTACCAAGGAGACCGCAGCTGGAGCGACAG
GTTCGGCGGCAGAGCACAACATCAACCGCGCCTCCGGGGTTGGGACTGAA
GGAGAGGATGCGGAGAAGAAGACACAGGATGGACGAGACGACTGCGAGAT
ATCCGACGGAGAAAAAGACGTTGTCGAAGATGAAGGTACTGAAGATGAGG
AAAAGAATTGGCATGCCTACCACAGTCGTGCTACCCATTTCAGTGGCGGC
CTTCCCACCACACGCTTGATGGATACGGTCGGTCTGGTTAAACAGCAGCA
ACACGCAAGACTGGCCTCTTGGGACATGATCCCACCGGCCCATGAGACTG
TCTTCTACATGTGCACTCATTCCGGAGCGTTCAGCGGTGGAGTATCACCT
ATCTTGTCGGCAAGCACTAGTGTATCCACGCCCTTAATGCACATGGATTC
CTCGTCAATGTCTGGCCAGCAGGGAGATAGCCCTTCTTCTCCCACGTCTT
CGTCTTCTTCTACATTGCCGTCAATCTTGTCTCAGACCACTTCCTCTTAT
CGAGTCCGAAATGTCATTGCCGTTAGCCACCCGAAACTGAGAGAATGTCC
CGTTCTACGGCCGAGACAAGCAGAAAAGTTGAAAGGCGCCTCGACGACTA
CAGTGGTCTATTTTATGGAACGACGCAAGAGCAGCTACTTGTCAGCGGCC
AGCAATGGGACCCTCACATCGGAGGCGACGTCGGCAGCTGCCAAGGACGA
TCCAATTTACGAGCCAACCTTCGAGGAGAAACTGGCCTCACGCATGGAGG
ACGCGGCAGTGACGAAGGCTGTCAAATGGTTGAGTGATTCCTCGTCGAGG
TCCACCTCAAGACCATCATATCCTCTTACTCCAAAGCACATGACCATCAA
GTCTGACACTTGTTTGGCCCCTCTAACGCATCCTATGTCTCCGTCATCCT
CCACAAAAGCCAATATAGTGAGCTTGAGTCCGGCAAAAGGTCTCCGAGAG
CAATCTCTCGTGACTCAAGCGCAAGACTCACCGTCAGCCCCGGCGCCATC
ACCGTTGCTCCCGTCGCCGGTGGCCATGGAGCCACAAAAGCCAGAGGAAA
ATATAACAGCGGCACCGATCTCTTCTTCTCCACGTACGTCTTTGTCAGCG
TGCCGTGTCACCAAAAAGGGCGACCTGACCTTGCTAGAAGAAGCTTTCTC
ATATTGCGGCGGAGGACAGGAGAAGATTGTAGATGGAAAGATGAAGCACT
AG

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