jgi.p|Nanoce1779_2|660214, gene_2236 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|660214
Unique Namegene_2236
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_4:1134757..1140653 +

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Properties
Property NameValue
TranscriptId660300
ProteinId660214
Product nameArmadillo-type fold
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_4supercontigscaffold_4:1134757..1140653 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL058ncniL058Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G04500NO04G04500Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|660214mRNA_2236-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|660214mRNA_2236Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|660214

>mRNA_2236-protein ID=mRNA_2236-protein|Name=jgi.p|Nanoce1779_2|660214|organism=Nannochloropsis oceanica|type=polypeptide|length=1884bp
MKAATTTSRIKRQGPASPLPPQAQAHPRGLVLSTPLSSSSSSSSSSSSSF
SSENSHYDDQHDEASDFTSPLSLSTALLPRQHHAAAFGDQKFCGFTFNFS
NNVPGMLYRSRNDPCSMTCPLKNIPHHTPDCSQQDKSEHPRDQGTTAAGN
ITREASGSNDALFDGDDAGFAFGDVVGTVALEKLDLRQRMALTLRNWCMD
EDNMALIAREGAIQALAALASRDDSLTRRFCAAAFYSLSHNPNFRAELVQ
VGACAIIAQVALNTKSPRVALSCAASLCNLSLESGTEPRLAEEGAVGALC
TLLLTFSERDIWITSLQGLYNLTCVTESYQGLDRVLKGLFSAYDTPCQEM
DPSQVVGRAIANLSVIYRMRLRILEEGLVDVVKRHIFPFADGVLQYNVAV
AFHNVACAQTCSSEMINRGVMACIVSLTRPPSKSNSCTSMFISGTVNKDD
EEQRILSQQPQQHNLPLLTCLATTLQYLSLEVEARRTTIRDGAVRAILNI
LEQTSDHTVLEGCAEALHAFTSFQDSTLLLIKHQTVPALIKLSDTLLASR
DPKRRRQRHSVVASFCNLLSAENHHSSVLDYKNCLTCVLRLAECLESGDE
DNGCSDDEILLEYLSCLYSNLACGTPRRFHAVMAGLVPRLVQLCDLEAPS
AVSVNLKARCATALANLMAIATTDGNISSGSLNKSNSSSGEISTTNVVSA
NKQGDNNNLFLKRMVQDGVVGCLTRLLVAATDEVLLESVTTALALTSFHN
DDIKAEMINQGVVHALIHAVTDEGLRGDKTQHAAAAIFASLSYSAQHIPH
LFDAGILDAIFLLARKEEIATRKRCATVLCNLSFDPHVRNHMVERNVVLL
LAQLSNMYSDETQMDCAWCFHNLACSSGSEAEAVARTTLNRDIMVNQGAV
GALLMIALVRAVTTKTREVCARALLNLITEETTAKVIDCGITQGLASLCG
LDSEVCLKICAQAFWTLSLHPIGRAKIASKRNSMQGLCSLIRSNVITTRT
LCGAAVLNLLLLEADTAVLATEAGALGVVKVMCTSGDAAVQIVCAHAVAK
IALLAACRAHMPKESIPQAMVLLAQQNQDEATAVAALRALTCLALSHFPL
TVLLQAGILHVVMFRVLSSGFLGTDVDSDECSNSHCELKDGDRRRSHSGT
SGRDVIECCIYILHRFALSKELRQAMTKTQVVCAIVVLLRRLGTGKVEKP
HQAPKTLLLETMLATTLERLSWIPASQHHIVEDGGMLALVQLVKQQQDAP
PPYGARLAKSIAIVFANLARTEGHRLHLVSVGVIEALTIVLKKGFLLGDG
ITDKKDVVVWRTVLGLLQLSESSDDLLVAMALNGALELLVFIILSASGKV
GERREVLQRYASGALCNFSYCQECRPLLAAQDGAVEAIMNLSKSPNAAIQ
RHCSIMISNLSAQQHAKLRVGAVGTLVNLFKSQDRHEKTNPSLEGGRENK
KGAIQAKFRRLLMAATLAKELKDGTKETAAGATGSAAEHNINRASGVGTE
GEDAEKKTQDGRDDCEISDGEKDVVEDEGTEDEEKNWHAYHSRATHFSGG
LPTTRLMDTVGLVKQQQHARLASWDMIPPAHETVFYMCTHSGAFSGGVSP
ILSASTSVSTPLMHMDSSSMSGQQGDSPSSPTSSSSSTLPSILSQTTSSY
RVRNVIAVSHPKLRECPVLRPRQAEKLKGASTTTVVYFMERRKSSYLSAA
SNGTLTSEATSAAAKDDPIYEPTFEEKLASRMEDAAVTKAVKWLSDSSSR
STSRPSYPLTPKHMTIKSDTCLAPLTHPMSPSSSTKANIVSLSPAKGLRE
QSLVTQAQDSPSAPAPSPLLPSPVAMEPQKPEENITAAPISSSPRTSLSA
CRVTKKGDLTLLEEAFSYCGGGQEKIVDGKMKH*
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Synonyms
Publications