jgi.p|Nanoce1779_2|572658, mRNA_1547 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|572658
Unique Name	mRNA_1547
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4639
Alignment location	scaffold_1:924652..929687 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	572744
Track	FilteredModels2
ProteinId	572658

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_1	supercontig	scaffold_1:924652..929687 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|572658	gene_1547	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|572658	mRNA_1547-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_1547	CDS_1547	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_1:924652..929687-
coding sequence from alignment at scaffold_1:924652..929687-

mRNA sequence

>mRNA_1547 ID=mRNA_1547|Name=jgi.p|Nanoce1779_2|572658|organism=Nannochloropsis oceanica|type=mRNA|length=4639bp
ACAGAGAGCAGCAGTGGTGCAAGCACCGCTTGCTACCACGAGGAGCCTCT
AGCGCAAGTCCCGCACCACATTGCGTACAAATGGCGCGCACGGCCAAGCG
CTCGGACGACGAAACTGACGGTAATGGCAGTCAAACTGGTGACATGCCGC
CTCGTGCACCCCCCCGACTGAGGAAGCGGCAGTCGTCCCACAGAAGGAAC
GCCGGGAGAGGACCGGCGGGAGCACGGAGTGGCTGGGCGTTGATTTGGCT
GGTGGCTCTTGGGGGCGTTTTGGGCCTGTTACTCTATTCATATCGCACAC
TGGTCCCGCGGGCACAAATCGTCGAGTCTCAACGGAAGATGCCCACCCCA
GTTGTCCTGGAGCATCATTGCAAGGAGCACATTGGACCGCCGCGGGTCAT
TCGAGTGACCGACACGGTGTGGGTAGCCGTGGGCTACGACTTGGCCAATA
CCATTTTGATCAAGACTAGCGCGGGGCATGTAATTGTCGATGTTGCCATG
AGCCCTTCCAAGGCTAGGGTAATTCGTCAGGCGCTTATTGAGGCTGCTGG
GAATGCTCCTATACATACCATTATCTACACGCACTCCCACATTGACCATG
TTGGGGGTGCGTCAGGCTGGGCCGCCAATGCTACAAGGATATGGGCCACG
GATGCGGTGACGGGGCATTTTTTCAAACAGTACGGGGTTTTTCGCAAGGT
CGAAAGTTTGCGAGGATCCCGTCAATACGGCTACCTCGTGTCACCGAGCG
ACTTGCCGTGCTCCGCTCTGGGGGCCCGCGTGGATTTAGACGCTATGAAG
GGCGAAGCAGGGTTCTTGCTCCCCACGGATACCTTCCAGGGACATGCCTC
GTTTTCCGTAGGTGAGGAGGACTTTGACTTGATCGAGGCGCATGGCGAGA
CGCATGACATGCTGATCGTGTGGTTGCCGAAGCAGAAGGTGCTGCTGCCG
GGCGATAATTACTACCGAGCCTTCCCCAACCTCTACACCATCCGCGGCAC
CACCCCACGTCCCGTCCGCGCCTGGATTCAATCTTTGGACACCATGCGGA
AGCTTAAGCCCGAATATTTGGTGCCTTCGCACACTGAACCTGTTTTCGGA
CTTGAAACTGTGTCTAAGCAATTGACTGATTACCGTGATGGGATCCAGTG
GGTGTATGTGGAGACGATCCGCGGGGCTAATGAGGGGAAGAGCATGGACG
AGCTGGCCTCCTCGGTGGGATTGCCATTGCATTTAAGAGATAATGATGCG
CTGGACGAGCTGTATGGACAAATCGATTGGTCCGTGAGGGCGATTTATTC
GGGGGAGCTGGGCTGGTTTGATGGGCAGGCGGAGGTAAGGGAAAAGAAGG
GAGAGTGTTAGGGAAATGATTTGTATCTTGCTTTTTACTGCATTCCTATA
AATTGTTTGTACCCAGACATGTATTATCCTCCACTCCGTTCTTTTCTCAT
TCCTCAGGAGCTCTACCCGCTCGGCCACGAGGAAGAGTCGCAAAAGACGG
TCCTCCTCATGGGCGGGGCGTCCAAAGTACTCAAAGCAGTGGAAGACGCG
CAAGCCATGAACGATCACCGATGGGCACTGCATCTCCTCCATATGCTGCG
TGCCGTCCAAAAAAAGGACAAATCCGTCTCGCGTAAGATTCTCAAAGCGC
TAGAAGCTGCCAGCTTGCGTGCCTTGGGTCGGACAATTTTCAATACCAAC
GGCAGGGCTTACTTGCTGCAGACGGCGTTGGAAAGAGAGGGGAATAGTCC
ACGGGCTGAGACCAAGCCAGTGCTGTCGGATGCGTTCATTGACTCCATTC
CTATTTCACTGGTATTTGAAGTAATGCAAACCAGGCTACGACCAGAGCTT
TCAATTGACGTGCATGAGTCAGCCATATTCCTTGTTGGGGGGTCAAAGCA
CATTGTGACGGTGCGGAGGGGCGTGGCGGAGGTGACGAAGGGTGATGCTT
TGCATGGAACTCCTGAACCTATTGGAACATTTATTGCGGATGAGAATACG
TTCCGACGAATAATGTTGCAGCTGAAATCTCCGGGGAAGGCTATTATGAA
TGGCGATGTACGGATTGAAGGGGACCAGCTTAAGTTCCTTGTGTTCGTGC
AGCGATTTGAGCGGGGTGCTTAAAATTGAGAACGAAAAACGCATGCATGG
ATTCCTAGGGGCATGTGTGAGGTTCAATAGAATGTGGATTGGGGATAGGA
TGGGGGGGAATGTCAAGGGGATGCTTGAAAATGAACGATACCGGCAGAAA
TAGAGATGGAGGTATATGGATAAATAACAAAATCAAAGAATTACGGGAAA
ATAATGCACGGTCGTACAAGCAACCTTCTATTTGCCATTTCATCCGGCGT
CATGCGTATCGATTTTATGGCAGTTGGCTACGAACTTTTTTTAACCTCCC
CAATTCATATGAAACGAATATATGGCTCACATCTGCCCACTTTTGACACG
CTGATGTCCCGCATAGCTACAGCAGCCTGGCACTGCCCACGTCCCTGCGG
ACAGGGAAAAAGGCGGTCAGATTCATTCTTGGCTTGGCAAAACTGGGATC
TCCTTTAGTCACGCCTCTGAACGATTAGTATCTCTGTCTGACCCCCAGCC
ACATCCTCATCCCTATTCCTCATCTGAATCAGCACAGCGCGCTCGCAAAT
CAAGGCGCTTTCATAGTCACGAACAACGAGGCACACATGCAAGACAGAAG
AAGACATCAGCTAGGATTTTCCACCTTTCGCTGCTCGTCATTCCGCTCCA
CCGTGGTCATCATCATGCTGGCCGCCTTGAGTCTAGTGAAACCCATGACA
GCCTGGCGAAGAAAAGCCGTAGGCTTCGTCCGACCCGATGCTCCTCATCT
GCGCCCACACATCTCCTCCTCCTCCTTTCCCCGGCGAGCTTTGTCCTCCT
CCACACCCCTGCGCTCCGCTGCCGCCGGTGCTGGCGACAAAAGGAAAGGT
TACTACATCACCACCCCCATATATTACGTGAACGACAAGCCGCATATTGG
GCATGCCTATACCACTTTGGCTTGTGATGTCATTGCACGCTTCATGCGCC
TCGATGGGCGGGACGTTTTCTTCCTGACTGGCACAGATGAGCATGGGCAG
AAAGTAGAACAAAGCGCAGCAAAGGCGGGTAAGACCCCCCAAGATTTTGT
TGATGAAGTCTCGCAGAATTTTATGTCCCTTGCCAAGACGATGGACTTTA
CGAATGATGTGTTTATTCGGACGACCCAGCATGATCACAAAGCCGCGGTG
CAAGCGTTGTGGAAGCAGTTGGAGGACGCGGGCCAAATTTACCTGGGAGC
TTACGAAGGATGGTACTCTGTGCGTGATGAAGCTTACTACACGGAGAGTG
AGCTAGTGGATGGTAAAGCTCCGACGGGGGCGGAGGTCGTGTGGGTGGTG
AAGGAACCGAGTTATTTTTTCAAGTTGTCGGCGTGGCAGGAGCCGCTGTT
GAAGTTCTATGAGGAGAATCCTGGGTTTATTGCACCAGAGAGTCGGCGAA
ATGAAGTGATTAGCTTTGTAAAGGGGGGATTGAAGGATTTGTCGATTTCG
AGGACGACATTTAAGTGGGGGGTGCCGGTGCCAGGGGATGCGGATCATGT
AATGTATGTGTGGATGGATGCATTGACTAATTATATCTCTGCGATTGGGT
ACCCGGATGCGGGAGGGAAATATCAAGATTTTTGGCCAGCAGATTTGCAT
GTAGTGGGAAAGGATATTCTGAGGTTCCACACGGTTTATTGGCCGGCGTT
TCTCCTCGCTGCCGGCCTGGCGCCCCCGAAGAAGGTGTTTGCCCATGGGT
GGTGGACGAAGGATAAGCAGAAGATAAGTAAGAGTGTAGGAAATGTGATT
GATCCGGTCGGATTGGTGGAGACGTTTGGGTTGGACTCGACAAGGTACTT
TTTGACGAGTGAGGTGCCGTTTGGGAATGATGGAGATTTTAGCAATGACG
CTTTCGTGCGGCGTGTGAACAACCAGTTGGCTAATGAATTGGGGAATCTC
TTTCAGAGGTCCCTGGCCTTCATAAGCAAGTATTGTGAGGGCAAAGTGCC
GAACCCGGCAAGTGCAATGACAGACGCGGATGTGGCTTTATTAAAGTCGG
CGAGGGGGTTGCTGGGGACGGCCAGGCCACTGGTGGAGGAGCAGCAGGCA
TTGCACAAGTACGCAGAAGCTCTTAATCAAGTTGTAAACGAAGGGAACCG
TTACTTTGACGAACAGGCGCCGTGGGCGCTCAAGAAGACGGATACGGACC
GAATGGCCACGGTTTTGTATATTACCATTGAGGCATTGCGATCCGTGGCC
ATCATGTACCAACCCATCATTCCGTCCTCGGCCTCCAAGCTTCTGGACCT
CCTGGCCGTCCCACTTGACCAAAGGACGTTTGCTCATATTGGTGCTGCTG
CTGCTTTGGTACCTGGTACCCCCCTCCCTACCCCTGAAGGAGTCTTCCCT
CGCGTTGAGGACCCTGCGGTGGCTGCTACTGCTGCTGCTGCTCCTCCCAA
GCCGCCAAAACAACCGAAGAAGCCCAAGGCACCCAAGGCGTCCAAAGCAG
AGCAGCAACAAGCATGAAGACATGCTGATGGGAAAGAGGGGAGAAGGCAA
AAGGAAATTTATAAAGAAGATGATCCTCATAAATCGTAA

protein sequence of jgi.p|Nanoce1779_2|572658

>mRNA_1547-protein ID=mRNA_1547-protein|Name=jgi.p|Nanoce1779_2|572658|organism=Nannochloropsis oceanica|type=polypeptide|length=627bp
MQDRRRHQLGFSTFRCSSFRSTVVIIMLAALSLVKPMTAWRRKAVGFVRP
DAPHLRPHISSSSFPRRALSSSTPLRSAAAGAGDKRKGYYITTPIYYVND
KPHIGHAYTTLACDVIARFMRLDGRDVFFLTGTDEHGQKVEQSAAKAGKT
PQDFVDEVSQNFMSLAKTMDFTNDVFIRTTQHDHKAAVQALWKQLEDAGQ
IYLGAYEGWYSVRDEAYYTESELVDGKAPTGAEVVWVVKEPSYFFKLSAW
QEPLLKFYEENPGFIAPESRRNEVISFVKGGLKDLSISRTTFKWGVPVPG
DADHVMYVWMDALTNYISAIGYPDAGGKYQDFWPADLHVVGKDILRFHTV
YWPAFLLAAGLAPPKKVFAHGWWTKDKQKISKSVGNVIDPVGLVETFGLD
STRYFLTSEVPFGNDGDFSNDAFVRRVNNQLANELGNLFQRSLAFISKYC
EGKVPNPASAMTDADVALLKSARGLLGTARPLVEEQQALHKYAEALNQVV
NEGNRYFDEQAPWALKKTDTDRMATVLYITIEALRSVAIMYQPIIPSSAS
KLLDLLAVPLDQRTFAHIGAAAALVPGTPLPTPEGVFPRVEDPAVAATAA
AAPPKPPKQPKKPKAPKASKAEQQQA*

mRNA from alignment at scaffold_1:924652..929687-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_1547 ID=mRNA_1547|Name=jgi.p|Nanoce1779_2|572658|organism=Nannochloropsis oceanica|type=mRNA|length=5036bp|location=Sequence derived from alignment at scaffold_1:924652..929687- (Nannochloropsis oceanica)
ACAGAGAGCAGCAGTGGTGCAAGCACCGCTTGCTACCACGAGGAGCCTCT
AGCGCAAGTCCCGCACCACATTGCGTACAAATGGCGCGCACGGCCAAGCG
CTCGGACGACGAAACTGACGGTAATGGCAGTCAAACTGGTGACATGCCGC
CTCGTGCACCCCCCCGACTGAGGAAGCGGCAGTCGTCCCACAGAAGGAAC
GCCGGGAGAGGACCGGCGGGAGCACGGAGTGGCTGGGCGTTGATTTGGCT
GGTGGCTCTTGGGGGCGTTTTGGGCCTGTTACTCTATTCATATCGCACAC
TGGTCCCGCGGGCACAAATCGTCGAGTCTCAACGGAAGATGCCCACCCCA
GTTGTCCTGGAGCATCATTGCAAGGAGCACATTGGACCGCCGCGGGTCAT
TCGAGTGACCGACACGGTGTGGGTAGCCGTGGGCTACGACTTGGCCAATA
CCATTTTGATCAAGACTAGCGCGGGGCATGTAATTGTCGATGTTGCCATG
AGCCCTTCCAAGGCTAGGGTAATTCGTCAGGCGCTTATTGAGGCTGCTGG
GAATGCTCCTATACATACCATTATCTACACGCACTCCCACATTGACCATG
TTGGGGGTGCGTCAGGCTGGGCCGCCAATGCTACAAGGATATGGGCCACG
GATGCGGTGACGGGGCATTTTTTCAAACAGTACGGGGTTTTTCGCAAGGT
ACACATCGAGATGGCGGTAGCGTGGTATAGAGAGGTGGAGGATGGTGGAA
TGTAATCGACAGGGCATGCATAATACAAGCTACTTCAATCCACCTCACAC
ATGCACACTTAACACTCCATTCCTGCTCTCAAACCCTACACCAGGTCGAA
AGTTTGCGAGGATCCCGTCAATACGGCTACCTCGTGTCACCGAGCGACTT
GCCGTGCTCCGCTCTGGGGGCCCGCGTGGATTTAGACGCTATGAAGGGCG
AAGCAGGGTTCTTGCTCCCCACGGATACCTTCCAGGGACATGCCTCGTTT
TCCGTAGGTGAGGAGGACTTTGACTTGATCGAGGCGCATGGCGAGACGCA
TGACATGCTGATCGTGTGGTTGCCGAAGCAGAAGGTGCTGCTGCCGGGCG
ATAATTACTACCGAGCCTTCCCCAACCTCTACACCATCCGCGGCACCACC
CCACGTCCCGTCCGCGCCTGGATTCAATCTTTGGACACCATGCGGAAGCT
TAAGCCCGAATATTTGGTGCCTTCGCACACTGAACCTGTTTTCGGACTTG
AAACTGTGTCTAAGCAATTGACTGATTACCGTGATGGGATCCAGTGGGTG
TATGTGGAGACGATCCGCGGGGCTAATGAGGGGAAGAGCATGGACGAGCT
GGCCTCCTCGGTGGGATTGCCATTGCATTTAAGAGATAATGATGCGCTGG
ACGAGCTGTATGGACAAATCGATTGGTCCGTGAGGGCGATTTATTCGGGG
GAGCTGGGCTGGTTTGATGGGCAGGCGGAGGTAAGGGAAAAGAAGGGAGA
GTGTTAGGGAAATGATTTGTATCTTGCTTTTTACTGCATTCCTATAAATT
GTTTGTACCCAGACATGTATTATCCTCCACTCCGTTCTTTTCTCATTCCT
CAGGAGCTCTACCCGCTCGGCCACGAGGAAGAGTCGCAAAAGACGGTCCT
CCTCATGGGCGGGGCGTCCAAAGTACTCAAAGCAGTGGAAGACGCGCAAG
CCATGAACGATCACCGATGGGCACTGCATCTCCTCCATATGCTGCGTGCC
GTCCAAAAAAAGGACAAATCCGTCTCGCGTAAGATTCTCAAAGCGCTAGA
AGCTGCCAGCTTGCGTGCCTTGGGTCGGACAATTTTCAATACCAACGGCA
GGGCTTACTTGCTGCAGACGGCGTTGGAAAGAGAGGGGAATAGTCCACGG
GCTGAGACCAAGCCAGTGCTGTCGGATGCGTTCATTGACTCCATTCCTAT
TTCACTGGTATTTGAAGTAATGCAAACCAGGCTACGACCAGAGCTTTCAA
TTGACGTGCATGAGTCAGCCATATTCCTTGTTGGGGGGTCAAAGCACATT
GTGACGGTGCGGAGGGGCGTGGCGGAGGTGACGAAGGGTGATGCTTTGCA
TGGAACTCCTGAACCTATTGGAACATTTATTGCGGATGAGAATACGTTCC
GACGAATAATGTTGCAGCTGAAATCTCCGGGGAAGGCTATTATGAATGGC
GATGTACGGATTGAAGGGGACCAGCTTAAGTTCCTTGTGTTCGTGCAGCG
ATTTGAGCGGGGTGCTTAAAATTGAGAACGAAAAACGCATGCATGGATTC
CTAGGGGCATGTGTGAGGTTCAATAGAATGTGGATTGGGGATAGGATGGG
GGGGAATGTCAAGGGGATGCTTGAAAATGAACGATACCGGCAGAAATAGA
GATGGAGGTATATGGATAAATAACAAAATCAAAGAATTACGGGAAAATAA
TGCACGGTCGTACAAGCAACCTTCTATTTGCCATTTCATCCGGCGTCATG
CGTATCGATTTTATGGCAGTTGGCTACGAACTTTTTTTAACCTCCCCAAT
TCATATGAAACGAATATATGGCTCACATCTGCCCACTTTTGACACGCTGA
TGTCCCGCATAGCTACAGCAGCCTGGCACTGCCCACGTCCCTGCGGACAG
GGAAAAAGGCGGTCAGATTCATTCTTGGCTTGGCAAAACTGGGATCTCCT
TTAGTCACGCCTCTGAACGATTAGTATCTCTGTCTGACCCCCAGCCACAT
CCTCATCCCTATTCCTCATCTGAATCAGCACAGCGCGCTCGCAAATCAAG
GCGCTTTCATAGTCACGAACAACGAGGCACACATGCAAGACAGAAGAAGA
CATCAGCTAGGATTTTCCACCTTTCGCTGCTCGTCATTCCGCTCCACCGT
GGTCATCATCATGCTGGCCGCCTTGAGTCTAGGTACGTGCGTGTGCACTT
GATGCGAGATTGGAGGACGCATAGGCATGCAATGCGAATTAATCCTCCAT
TAGCGTCTAATTGTAACTGTATTTATCCTTCTCTTGCCTCCGGTCCCTTT
TGTGCCTCATCTACTTAATGCCTTGTCTTGATAAGTTCTCTGTTCTAAGG
GGCTTTCCGCATTTCTCTATCTCCTCCTTTCCTAGTGCACCAACTCAATC
CTTTAACCTCACTTCTCCCCAAAACTTCTACAGTGAAACCCATGACAGCC
TGGCGAAGAAAAGCCGTAGGCTTCGTCCGACCCGATGCTCCTCATCTGCG
CCCACACATCTCCTCCTCCTCCTTTCCCCGGCGAGCTTTGTCCTCCTCCA
CACCCCTGCGCTCCGCTGCCGCCGGTGCTGGCGACAAAAGGAAAGGTTAC
TACATCACCACCCCCATATATTACGTGAACGACAAGCCGCATATTGGGCA
TGCCTATACCACTTTGGCTTGTGATGTCATTGCACGCTTCATGCGCCTCG
ATGGGCGGGACGTTTTCTTCCTGACTGGCACAGATGAGCATGGGCAGAAA
GTAGAACAAAGCGCAGCAAAGGCGGGTAAGACCCCCCAAGATTTTGTTGA
TGAAGTCTCGCAGAATTTTATGTCCCTTGCCAAGACGATGGACTTTACGA
ATGATGTGTTTATTCGGACGACCCAGCATGATCACAAAGCCGCGGTGCAA
GCGTTGTGGAAGCAGTTGGAGGACGCGGGCCAAATTTACCTGGGAGCTTA
CGAAGGATGGTACTCTGTGCGTGATGAAGCTTACTACACGGAGAGTGAGC
TAGTGGATGGTAAAGCTCCGACGGGGGCGGAGGTCGTGTGGGTGGTGAAG
GAACCGAGTTATTTTTTCAAGTTGTCGGCGTGGCAGGAGCCGCTGTTGAA
GTTCTATGAGGAGAATCCTGGGTTTATTGCACCAGAGAGTCGGCGAAATG
AAGTGATTAGCTTTGTAAAGGGGGGATTGAAGGATTTGTCGATTTCGAGG
ACGACATTTAAGTGGGGGGTGCCGGTGCCAGGGGATGCGGATCATGTAAT
GTATGTGTGGATGGATGCATTGACTAATTATATCTCTGCGATTGGGTACC
CGGATGCGGGAGGGAAATATCAAGATTTTTGGCCAGCAGATTTGCATGTA
GTGGGAAAGGATATTCTGAGGTTCCACACGGTTTATTGGCCGGCGTTTCT
CCTCGCTGCCGGCCTGGCGCCCCCGAAGAAGGTGTTTGCCCATGGGTGGT
GGACGAAGGATAAGCAGAAGATAAGTAAGAGTGTAGGAAATGTGATTGAT
CCGGTCGGATTGGTGGAGACGTTTGGGTTGGACTCGACAAGGTACTTTTT
GACGAGTGAGGTGCCGTTTGGGAATGATGGAGATTTTAGCAATGACGCTT
TCGTGCGGCGTGTGAACAACCAGTTGGCTAATGAATTGGGGAATCTCTTT
CAGAGGTCCCTGGCCTTCATAAGCAAGTATTGTGAGGGCAAAGTGCCGAA
CCCGGCAAGTGCAATGACAGACGCGGATGTGGCTTTATTAAAGTCGGCGA
GGGGGTTGCTGGGGACGGCCAGGCCACTGGTGGAGGAGCAGCAGGCATTG
CACAAGTACGCAGAAGCTCTTAATCAAGTTGTAAACGAAGGGAACCGTTA
CTTTGACGAACAGGCGCCGTGGGCGCTCAAGAAGACGGATACGGACCGAA
TGGCCACGGTTTTGTATATTACCATTGAGGCATTGCGATCCGTGGCCATC
ATGTACCAACCCATCATTCCGTCCTCGGCCTCCAAGCTTCTGGACCTCCT
GGCCGTCCCACTTGACCAAAGGACGTTTGCTCATATTGGTGCTGCTGCTG
CTTTGGTACCTGGTACCCCCCTCCCTACCCCTGAAGGAGTCTTCCCTCGC
GTTGAGGACCCTGCGGTGGCTGCTACTGCTGCTGCTGCTCCTCCCAAGCC
GCCAAAACAACCGAAGAAGCCCAAGGCACCCAAGGCGTCCAAAGCAGAGC
AGCAACAAGCATGAAGACATGCTGATGGGAAAGAGGGGAGAAGGCAAAAG
GAAATTTATAAAGAAGATGATCCTCATAAATCGTAA

Coding sequence (CDS) from alignment at scaffold_1:924652..929687-

>mRNA_1547 ID=mRNA_1547|Name=jgi.p|Nanoce1779_2|572658|organism=Nannochloropsis oceanica|type=CDS|length=3762bp|location=Sequence derived from alignment at scaffold_1:924652..929687- (Nannochloropsis oceanica)
TGAAACCCATGACAGCCTGGCGAAGAAAAGCCGTAGGCTTCGTCCGACCC
GATGCTCCTCATCTGCGCCCACACATCTCCTCCTCCTCCTTTCCCCGGCG
AGCTTTGTCCTCCTCCACACCCCTGCGCTCCGCTGCCGCCGGTGCTGGCG
ACAAAAGGAAAGGTTACTACATCACCACCCCCATATATTACGTGAACGAC
AAGCCGCATATTGGGCATGCCTATACCACTTTGGCTTGTGATGTCATTGC
ACGCTTCATGCGCCTCGATGGGCGGGACGTTTTCTTCCTGACTGGCACAG
ATGAGCATGGGCAGAAAGTAGAACAAAGCGCAGCAAAGGCGGGTAAGACC
CCCCAAGATTTTGTTGATGAAGTCTCGCAGAATTTTATGTCCCTTGCCAA
GACGATGGACTTTACGAATGATGTGTTTATTCGGACGACCCAGCATGATC
ACAAAGCCGCGGTGCAAGCGTTGTGGAAGCAGTTGGAGGACGCGGGCCAA
ATTTACCTGGGAGCTTACGAAGGATGGTACTCTGTGCGTGATGAAGCTTA
CTACACGGAGAGTGAGCTAGTGGATGGTAAAGCTCCGACGGGGGCGGAGG
TCGTGTGGGTGGTGAAGGAACCGAGTTATTTTTTCAAGTTGTCGGCGTGG
CAGGAGCCGCTGTTGAAGTTCTATGAGGAGAATCCTGGGTTTATTGCACC
AGAGAGTCGGCGAAATGAAGTGATTAGCTTTGTAAAGGGGGGATTGAAGG
ATTTGTCGATTTCGAGGACGACATTTAAGTGGGGGGTGCCGGTGCCAGGG
GATGCGGATCATGTAATGTATGTGTGGATGGATGCATTGACTAATTATAT
CTCTGCGATTGGGTACCCGGATGCGGGAGGGAAATATCAAGATTTTTGGC
CAGCAGATTTGCATGTAGTGGGAAAGGATATTCTGAGGTTCCACACGGTT
TATTGGCCGGCGTTTCTCCTCGCTGCCGGCCTGGCGCCCCCGAAGAAGGT
GTTTGCCCATGGGTGGTGGACGAAGGATAAGCAGAAGATAAGTAAGAGTG
TAGGAAATGTGATTGATCCGGTCGGATTGGTGGAGACGTTTGGGTTGGAC
TCGACAAGGTACTTTTTGACGAGTGAGGTGCCGTTTGGGAATGATGGAGA
TTTTAGCAATGACGCTTTCGTGCGGCGTGTGAACAACCAGTTGGCTAATG
AATTGGGGAATCTCTTTCAGAGGTCCCTGGCCTTCATAAGCAAGTATTGT
GAGGGCAAAGTGCCGAACCCGGCAAGTGCAATGACAGACGCGGATGTGGC
TTTATTAAAGTCGGCGAGGGGGTTGCTGGGGACGGCCAGGCCACTGGTGG
AGGAGCAGCAGGCATTGCACAAGTACGCAGAAGCTCTTAATCAAGTTGTA
AACGAAGGGAACCGTTACTTTGACGAACAGGCGCCGTGGGCGCTCAAGAA
GACGGATACGGACCGAATGGCCACGGTTTTGTATATTACCATTGAGGCAT
TGCGATCCGTGGCCATCATGTACCAACCCATCATTCCGTCCTCGGCCTCC
AAGCTTCTGGACCTCCTGGCCGTCCCACTTGACCAAAGGACGTTTGCTCA
TATTGGTGCTGCTGCTGCTTTGGTACCTGGTACCCCCCTCCCTACCCCTG
AAGGAGTCTTCCCTCGCGTTGAGGACCCTGCGGTGGCTGCTACTGCTGCT
GCTGCTCCTCCCAAGCCGCCAAAACAACCGAAGAAGCCCAAGGCACCCAA
GGCGTCCAAAGCAGAGCAGCAACAAGCATGAATGCAAGACAGAAGAAGAC
ATCAGCTAGGATTTTCCACCTTTCGCTGCTCGTCATTCCGCTCCACCGTG
GTCATCATCATGCTGGCCGCCTTGAGTCTAGTGAAACCCATGACAGCCTG
GCGAAGAAAAGCCGTAGGCTTCGTCCGACCCGATGCTCCTCATCTGCGCC
CACACATCTCCTCCTCCTCCTTTCCCCGGCGAGCTTTGTCCTCCTCCACA
CCCCTGCGCTCCGCTGCCGCCGGTGCTGGCGACAAAAGGAAAGGTTACTA
CATCACCACCCCCATATATTACGTGAACGACAAGCCGCATATTGGGCATG
CCTATACCACTTTGGCTTGTGATGTCATTGCACGCTTCATGCGCCTCGAT
GGGCGGGACGTTTTCTTCCTGACTGGCACAGATGAGCATGGGCAGAAAGT
AGAACAAAGCGCAGCAAAGGCGGGTAAGACCCCCCAAGATTTTGTTGATG
AAGTCTCGCAGAATTTTATGTCCCTTGCCAAGACGATGGACTTTACGAAT
GATGTGTTTATTCGGACGACCCAGCATGATCACAAAGCCGCGGTGCAAGC
GTTGTGGAAGCAGTTGGAGGACGCGGGCCAAATTTACCTGGGAGCTTACG
AAGGATGGTACTCTGTGCGTGATGAAGCTTACTACACGGAGAGTGAGCTA
GTGGATGGTAAAGCTCCGACGGGGGCGGAGGTCGTGTGGGTGGTGAAGGA
ACCGAGTTATTTTTTCAAGTTGTCGGCGTGGCAGGAGCCGCTGTTGAAGT
TCTATGAGGAGAATCCTGGGTTTATTGCACCAGAGAGTCGGCGAAATGAA
GTGATTAGCTTTGTAAAGGGGGGATTGAAGGATTTGTCGATTTCGAGGAC
GACATTTAAGTGGGGGGTGCCGGTGCCAGGGGATGCGGATCATGTAATGT
ATGTGTGGATGGATGCATTGACTAATTATATCTCTGCGATTGGGTACCCG
GATGCGGGAGGGAAATATCAAGATTTTTGGCCAGCAGATTTGCATGTAGT
GGGAAAGGATATTCTGAGGTTCCACACGGTTTATTGGCCGGCGTTTCTCC
TCGCTGCCGGCCTGGCGCCCCCGAAGAAGGTGTTTGCCCATGGGTGGTGG
ACGAAGGATAAGCAGAAGATAAGTAAGAGTGTAGGAAATGTGATTGATCC
GGTCGGATTGGTGGAGACGTTTGGGTTGGACTCGACAAGGTACTTTTTGA
CGAGTGAGGTGCCGTTTGGGAATGATGGAGATTTTAGCAATGACGCTTTC
GTGCGGCGTGTGAACAACCAGTTGGCTAATGAATTGGGGAATCTCTTTCA
GAGGTCCCTGGCCTTCATAAGCAAGTATTGTGAGGGCAAAGTGCCGAACC
CGGCAAGTGCAATGACAGACGCGGATGTGGCTTTATTAAAGTCGGCGAGG
GGGTTGCTGGGGACGGCCAGGCCACTGGTGGAGGAGCAGCAGGCATTGCA
CAAGTACGCAGAAGCTCTTAATCAAGTTGTAAACGAAGGGAACCGTTACT
TTGACGAACAGGCGCCGTGGGCGCTCAAGAAGACGGATACGGACCGAATG
GCCACGGTTTTGTATATTACCATTGAGGCATTGCGATCCGTGGCCATCAT
GTACCAACCCATCATTCCGTCCTCGGCCTCCAAGCTTCTGGACCTCCTGG
CCGTCCCACTTGACCAAAGGACGTTTGCTCATATTGGTGCTGCTGCTGCT
TTGGTACCTGGTACCCCCCTCCCTACCCCTGAAGGAGTCTTCCCTCGCGT
TGAGGACCCTGCGGTGGCTGCTACTGCTGCTGCTGCTCCTCCCAAGCCGC
CAAAACAACCGAAGAAGCCCAAGGCACCCAAGGCGTCCAAAGCAGAGCAG
CAACAAGCATGAATGCAAGACAGAAGAAGACATCAGCTAGGATTTTCCAC
CTTTCGCTGCTCGTCATTCCGCTCCACCGTGGTCATCATCATGCTGGCCG
CCTTGAGTCTAG

Synonyms

Publications