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Properties
| Property Name | Value |
|---|
| TranscriptId | 617692 |
| Track | FilteredModels2 |
| ProteinId | 617606 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_141 | supercontig | scaffold_141:8668..10532 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_12281 ID=mRNA_12281|Name=jgi.p|Nanoce1779_2|617606|organism=Nannochloropsis oceanica|type=mRNA|length=1419bp
AGATAGCGTTGGAATCTAAGGCATTGCGGTGGGCAGGTAGCAGCAGCAAG
GAACAAGGGCAGAGCAGCCGGGGCACATAAACCTCCCGTCTCTCGTAGCA
ACCCCCGTCCAACCTCGCCGCTGCCTCCACTCACAGGCACTTGATTGCCG
CATCAGTTATGACGTCCTTCCCTGCACTCCTCCTGCTATTGCTGCCGTGC
CTGGCCGCATCCTTCTTGATACTTCCCCGGTCGGCCACTTCCTCGTCTGG
CCAGTGCCCGGCTGCCCGCGTCTACAGAACAACATGTACGACAAGAAGAC
GGGCCGCGACCACAAGACGAGCAGCAACACCGAGGCCATCCACATTCTGT
GATACTTTTAACGGTGGCTGGGCAGGCTGGGAATGTCACTTCTCCCTCGC
CTCCGGTCACGTGTTGCCAGTGCCCGCCGAGGATCTGCCGGAGGCCCTGC
GGGAGTGGGAGGTTGAGATGTGGGGGTGGGAAGGAACATCCTACGACAAT
GTGAGGGAAGAGGAGGGGGAAAAAGAGGAGAAAATGCAGATGACCTTCAT
CGACAGGAAGGCTGCACGCTTCATGGTCGAGGCTGGATGTGGCTGCGAGA
ATGTGGGAAAACAAAAAAGTCAAGCCCACCTCGGTCCCCTCCATCTCGCG
CCGCATGGAGCCGGCTACCTTGCGACTGACCGATTGACCAGTTCCTTCAC
CCGCCTTGAAGTTGCATTCTCCTCCTCCAACTCCTCCTCTTCCTCCCCCA
CCGAACAAACCCGTGCTCGGATCCTCATTGATTTGCACACCACATCCTTT
CCCTCATCATCTTCTGCCTCCTCCTCTTCTTCCTCCTCCTCCTCCCCTTC
CTCCCCACCCGCACAACCCACTACCACCCCTCGAGATACACTCCGCGTCC
ACCTGGAACGGCGCTTCACTCCCTTCCTCCCCCTCGACCCAGACGAGCAG
AATGATCCTTTCAAGAAATCAATCGATCAGACCACTATATCGCGACGCGT
GGTCGTGCCATGCTTTGGAGACCCCGAGGCGAAGGCGGCAGGGAGGCAGG
GGGAGGGAGGGCTGGGAAAGAGTGGGGCATGGGTGGCGTGGGAGAAAGAG
GGGGGGGTCTTGGAAGTGGGTTGGAGACCGGAAATGTCCATGTATGGGGG
AGAGAGTTGTGGGGTGGAAGAGATGGTGTGTCGGGCAACGCTGAACATGG
CGACGGGAGAAGTCAAAGCGTGCGAGTGGGGCAAGGGAACGAAATGAGAA
TGAATGAGGTACGAATAAATCAACTAAAAGAGAAATGAATGACCATTCCG
CAAGGCTGAGGGGAAAGAGAAGCAGCGTTAAGATGAAAAACAACGAGGCG
AGAGCGCGATCATTCTTTCTGCAGAAAATCCGTGCTTTTTTCTATACTCC
CATACCCGGCATTACAGGC back to topprotein sequence of jgi.p|Nanoce1779_2|617606 >mRNA_12281-protein ID=mRNA_12281-protein|Name=jgi.p|Nanoce1779_2|617606|organism=Nannochloropsis oceanica|type=polypeptide|length=363bp
MTSFPALLLLLLPCLAASFLILPRSATSSSGQCPAARVYRTTCTTRRRAA
TTRRAATPRPSTFCDTFNGGWAGWECHFSLASGHVLPVPAEDLPEALREW
EVEMWGWEGTSYDNVREEEGEKEEKMQMTFIDRKAARFMVEAGCGCENVG
KQKSQAHLGPLHLAPHGAGYLATDRLTSSFTRLEVAFSSSNSSSSSPTEQ
TRARILIDLHTTSFPSSSSASSSSSSSSSPSSPPAQPTTTPRDTLRVHLE
RRFTPFLPLDPDEQNDPFKKSIDQTTISRRVVVPCFGDPEAKAAGRQGEG
GLGKSGAWVAWEKEGGVLEVGWRPEMSMYGGESCGVEEMVCRATLNMATG
EVKACEWGKGTK* back to topmRNA from alignment at scaffold_141:8668..10532- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_12281 ID=mRNA_12281|Name=jgi.p|Nanoce1779_2|617606|organism=Nannochloropsis oceanica|type=mRNA|length=1865bp|location=Sequence derived from alignment at scaffold_141:8668..10532- (Nannochloropsis oceanica)
AGATAGCGTTGGAATCTAAGGCATTGCGGTGGGCAGGTAGCAGCAGCAAG
GAACAAGGGCAGAGCAGCCGGGGCACATAAACCTCCCGTCTCTCGTAGCA
ACCCCCGTCCAACCTCGCCGCTGCCTCCACTCACAGGCACTTGATTGCCG
CATCAGTTATGACGTCCTTCCCTGCACTCCTCCTGCTATTGCTGCCGTGC
CTGGCCGCATCCTTCTTGATACTTCCCCGGTCGGCCACTTCCTCGTCTGG
CCAGTGCCCGGCTGCCCGCGTCTACAGAACAACATGTACGACAAGAAGAC
GGGCCGCGACCACAAGACGAGCAGCAACACCGAGGCCATCCACATTCTGT
GATACTTTTAACGGTGGCTGGGCAGGTGAGTCGCCACCTCTTTATTTTCG
CGTGAGACTGTCCTGCACATTCCAGCTTCCTCCCCTCCAAGCTGCGGACG
TTTTTTTTTCCTCATTGAGACGGCAATGCCCTCCCTTCATTCAGACATCT
CTCATCCCTCCTATGTATCCTCCTCTTTCTTCCTCCCTTAGGCTGGGAAT
GTCACTTCTCCCTCGCCTCCGGTCACGTGTTGCCAGTGCCCGCCGAGGAT
CTGCCGGAGGCCCTGCGGGAGTGGGAGGTTGAGATGTGGGGGTGGGAAGG
AACATCCTACGACAATGTGAGGTGAGTGATAAAGGAGGAGGGAGGGAGGG
AGAAAGATGACGCCACACGTTGACTGGGCCCTCATTGACTCACTTGGGAT
GTAATTTGCGTACGTCATACACCAACATACATACAAGGGAAGAGGAGGGG
GAAAAAGAGGAGAAAATGCAGATGACCTTCATCGACAGGAAGGCTGCACG
CTTCATGGTCGAGGCTGGATGTGGCTGCGAGAATGTGGGAAAACAAGTAC
GTATGTGTGATTTCACCCTGGCCTGGTCTTACGCCGTCTTGCCCATCACC
ATCCCCCTTCCTCCCCTCCTGTCCCTTCCTCCCCTCCTCTCCTTCCCCTC
ACCTCCCACAACTCCATTCCCATCCTAAACAACTCTCATATCCACACCCT
ATATTTTCAGAAAAGTCAAGCCCACCTCGGTCCCCTCCATCTCGCGCCGC
ATGGAGCCGGCTACCTTGCGACTGACCGATTGACCAGTTCCTTCACCCGC
CTTGAAGTTGCATTCTCCTCCTCCAACTCCTCCTCTTCCTCCCCCACCGA
ACAAACCCGTGCTCGGATCCTCATTGATTTGCACACCACATCCTTTCCCT
CATCATCTTCTGCCTCCTCCTCTTCTTCCTCCTCCTCCTCCCCTTCCTCC
CCACCCGCACAACCCACTACCACCCCTCGAGATACACTCCGCGTCCACCT
GGAACGGCGCTTCACTCCCTTCCTCCCCCTCGACCCAGACGAGCAGAATG
ATCCTTTCAAGAAATCAATCGATCAGACCACTATATCGCGACGCGTGGTC
GTGCCATGCTTTGGAGACCCCGAGGCGAAGGCGGCAGGGAGGCAGGGGGA
GGGAGGGCTGGGAAAGAGTGGGGCATGGGTGGCGTGGGAGAAAGAGGGGG
GGGTCTTGGAAGTGGGTTGGAGACCGGAAATGTCCATGTATGGGGGAGAG
AGTTGTGGGGTGGAAGAGATGGTGTGTCGGGCAACGCTGAACATGGCGAC
GGGAGAAGTCAAAGCGTGCGAGTGGGGCAAGGGAACGAAATGAGAATGAA
TGAGGTACGAATAAATCAACTAAAAGAGAAATGAATGACCATTCCGCAAG
GCTGAGGGGAAAGAGAAGCAGCGTTAAGATGAAAAACAACGAGGCGAGAG
CGCGATCATTCTTTCTGCAGAAAATCCGTGCTTTTTTCTATACTCCCATA
CCCGGCATTACAGGC back to topCoding sequence (CDS) from alignment at scaffold_141:8668..10532- >mRNA_12281 ID=mRNA_12281|Name=jgi.p|Nanoce1779_2|617606|organism=Nannochloropsis oceanica|type=CDS|length=4356bp|location=Sequence derived from alignment at scaffold_141:8668..10532- (Nannochloropsis oceanica)
AAAAGTCAAGCCCACCTCGGTCCCCTCCATCTCGCGCCGCATGGAGCCGG
CTACCTTGCGACTGACCGATTGACCAGTTCCTTCACCCGCCTTGAAGTTG
CATTCTCCTCCTCCAACTCCTCCTCTTCCTCCCCCACCGAACAAACCCGT
GCTCGGATCCTCATTGATTTGCACACCACATCCTTTCCCTCATCATCTTC
TGCCTCCTCCTCTTCTTCCTCCTCCTCCTCCCCTTCCTCCCCACCCGCAC
AACCCACTACCACCCCTCGAGATACACTCCGCGTCCACCTGGAACGGCGC
TTCACTCCCTTCCTCCCCCTCGACCCAGACGAGCAGAATGATCCTTTCAA
GAAATCAATCGATCAGACCACTATATCGCGACGCGTGGTCGTGCCATGCT
TTGGAGACCCCGAGGCGAAGGCGGCAGGGAGGCAGGGGGAGGGAGGGCTG
GGAAAGAGTGGGGCATGGGTGGCGTGGGAGAAAGAGGGGGGGGTCTTGGA
AGTGGGTTGGAGACCGGAAATGTCCATGTATGGGGGAGAGAGTTGTGGGG
TGGAAGAGATGGTGTGTCGGGCAACGCTGAACATGGCGACGGGAGAAGTC
AAAGCGTGCGAGTGGGGCAAGGGAACGAAATGAGGAAGAGGAGGGGGAAA
AAGAGGAGAAAATGCAGATGACCTTCATCGACAGGAAGGCTGCACGCTTC
ATGGTCGAGGCTGGATGTGGCTGCGAGAATGTGGGAAAACAAGCTGGGAA
TGTCACTTCTCCCTCGCCTCCGGTCACGTGTTGCCAGTGCCCGCCGAGGA
TCTGCCGGAGGCCCTGCGGGAGTGGGAGGTTGAGATGTGGGGGTGGGAAG
GAACATCCTACGACAATGTGAGATGACGTCCTTCCCTGCACTCCTCCTGC
TATTGCTGCCGTGCCTGGCCGCATCCTTCTTGATACTTCCCCGGTCGGCC
ACTTCCTCGTCTGGCCAGTGCCCGGCTGCCCGCGTCTACAGAACAACATG
TACGACAAGAAGACGGGCCGCGACCACAAGACGAGCAGCAACACCGAGGC
CATCCACATTCTGTGATACTTTTAACGGTGGCTGGGCAGAAAAGTCAAGC
CCACCTCGGTCCCCTCCATCTCGCGCCGCATGGAGCCGGCTACCTTGCGA
CTGACCGATTGACCAGTTCCTTCACCCGCCTTGAAGTTGCATTCTCCTCC
TCCAACTCCTCCTCTTCCTCCCCCACCGAACAAACCCGTGCTCGGATCCT
CATTGATTTGCACACCACATCCTTTCCCTCATCATCTTCTGCCTCCTCCT
CTTCTTCCTCCTCCTCCTCCCCTTCCTCCCCACCCGCACAACCCACTACC
ACCCCTCGAGATACACTCCGCGTCCACCTGGAACGGCGCTTCACTCCCTT
CCTCCCCCTCGACCCAGACGAGCAGAATGATCCTTTCAAGAAATCAATCG
ATCAGACCACTATATCGCGACGCGTGGTCGTGCCATGCTTTGGAGACCCC
GAGGCGAAGGCGGCAGGGAGGCAGGGGGAGGGAGGGCTGGGAAAGAGTGG
GGCATGGGTGGCGTGGGAGAAAGAGGGGGGGGTCTTGGAAGTGGGTTGGA
GACCGGAAATGTCCATGTATGGGGGAGAGAGTTGTGGGGTGGAAGAGATG
GTGTGTCGGGCAACGCTGAACATGGCGACGGGAGAAGTCAAAGCGTGCGA
GTGGGGCAAGGGAACGAAATGAGGAAGAGGAGGGGGAAAAAGAGGAGAAA
ATGCAGATGACCTTCATCGACAGGAAGGCTGCACGCTTCATGGTCGAGGC
TGGATGTGGCTGCGAGAATGTGGGAAAACAAGCTGGGAATGTCACTTCTC
CCTCGCCTCCGGTCACGTGTTGCCAGTGCCCGCCGAGGATCTGCCGGAGG
CCCTGCGGGAGTGGGAGGTTGAGATGTGGGGGTGGGAAGGAACATCCTAC
GACAATGTGAGATGACGTCCTTCCCTGCACTCCTCCTGCTATTGCTGCCG
TGCCTGGCCGCATCCTTCTTGATACTTCCCCGGTCGGCCACTTCCTCGTC
TGGCCAGTGCCCGGCTGCCCGCGTCTACAGAACAACATGTACGACAAGAA
GACGGGCCGCGACCACAAGACGAGCAGCAACACCGAGGCCATCCACATTC
TGTGATACTTTTAACGGTGGCTGGGCAGAAAAGTCAAGCCCACCTCGGTC
CCCTCCATCTCGCGCCGCATGGAGCCGGCTACCTTGCGACTGACCGATTG
ACCAGTTCCTTCACCCGCCTTGAAGTTGCATTCTCCTCCTCCAACTCCTC
CTCTTCCTCCCCCACCGAACAAACCCGTGCTCGGATCCTCATTGATTTGC
ACACCACATCCTTTCCCTCATCATCTTCTGCCTCCTCCTCTTCTTCCTCC
TCCTCCTCCCCTTCCTCCCCACCCGCACAACCCACTACCACCCCTCGAGA
TACACTCCGCGTCCACCTGGAACGGCGCTTCACTCCCTTCCTCCCCCTCG
ACCCAGACGAGCAGAATGATCCTTTCAAGAAATCAATCGATCAGACCACT
ATATCGCGACGCGTGGTCGTGCCATGCTTTGGAGACCCCGAGGCGAAGGC
GGCAGGGAGGCAGGGGGAGGGAGGGCTGGGAAAGAGTGGGGCATGGGTGG
CGTGGGAGAAAGAGGGGGGGGTCTTGGAAGTGGGTTGGAGACCGGAAATG
TCCATGTATGGGGGAGAGAGTTGTGGGGTGGAAGAGATGGTGTGTCGGGC
AACGCTGAACATGGCGACGGGAGAAGTCAAAGCGTGCGAGTGGGGCAAGG
GAACGAAATGAGGAAGAGGAGGGGGAAAAAGAGGAGAAAATGCAGATGAC
CTTCATCGACAGGAAGGCTGCACGCTTCATGGTCGAGGCTGGATGTGGCT
GCGAGAATGTGGGAAAACAAGCTGGGAATGTCACTTCTCCCTCGCCTCCG
GTCACGTGTTGCCAGTGCCCGCCGAGGATCTGCCGGAGGCCCTGCGGGAG
TGGGAGGTTGAGATGTGGGGGTGGGAAGGAACATCCTACGACAATGTGAG
ATGACGTCCTTCCCTGCACTCCTCCTGCTATTGCTGCCGTGCCTGGCCGC
ATCCTTCTTGATACTTCCCCGGTCGGCCACTTCCTCGTCTGGCCAGTGCC
CGGCTGCCCGCGTCTACAGAACAACATGTACGACAAGAAGACGGGCCGCG
ACCACAAGACGAGCAGCAACACCGAGGCCATCCACATTCTGTGATACTTT
TAACGGTGGCTGGGCAGAAAAGTCAAGCCCACCTCGGTCCCCTCCATCTC
GCGCCGCATGGAGCCGGCTACCTTGCGACTGACCGATTGACCAGTTCCTT
CACCCGCCTTGAAGTTGCATTCTCCTCCTCCAACTCCTCCTCTTCCTCCC
CCACCGAACAAACCCGTGCTCGGATCCTCATTGATTTGCACACCACATCC
TTTCCCTCATCATCTTCTGCCTCCTCCTCTTCTTCCTCCTCCTCCTCCCC
TTCCTCCCCACCCGCACAACCCACTACCACCCCTCGAGATACACTCCGCG
TCCACCTGGAACGGCGCTTCACTCCCTTCCTCCCCCTCGACCCAGACGAG
CAGAATGATCCTTTCAAGAAATCAATCGATCAGACCACTATATCGCGACG
CGTGGTCGTGCCATGCTTTGGAGACCCCGAGGCGAAGGCGGCAGGGAGGC
AGGGGGAGGGAGGGCTGGGAAAGAGTGGGGCATGGGTGGCGTGGGAGAAA
GAGGGGGGGGTCTTGGAAGTGGGTTGGAGACCGGAAATGTCCATGTATGG
GGGAGAGAGTTGTGGGGTGGAAGAGATGGTGTGTCGGGCAACGCTGAACA
TGGCGACGGGAGAAGTCAAAGCGTGCGAGTGGGGCAAGGGAACGAAATGA
GGAAGAGGAGGGGGAAAAAGAGGAGAAAATGCAGATGACCTTCATCGACA
GGAAGGCTGCACGCTTCATGGTCGAGGCTGGATGTGGCTGCGAGAATGTG
GGAAAACAAGCTGGGAATGTCACTTCTCCCTCGCCTCCGGTCACGTGTTG
CCAGTGCCCGCCGAGGATCTGCCGGAGGCCCTGCGGGAGTGGGAGGTTGA
GATGTGGGGGTGGGAAGGAACATCCTACGACAATGTGAGATGACGTCCTT
CCCTGCACTCCTCCTGCTATTGCTGCCGTGCCTGGCCGCATCCTTCTTGA
TACTTCCCCGGTCGGCCACTTCCTCGTCTGGCCAGTGCCCGGCTGCCCGC
GTCTACAGAACAACATGTACGACAAGAAGACGGGCCGCGACCACAAGACG
AGCAGCAACACCGAGGCCATCCACATTCTGTGATACTTTTAACGGTGGCT
GGGCAG back to top
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