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Properties
Property Name | Value |
TranscriptId | 615594 |
Track | FilteredModels2 |
ProteinId | 615508 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_102 | supercontig | scaffold_102:39281..41700 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_12121 ID=mRNA_12121|Name=jgi.p|Nanoce1779_2|615508|organism=Nannochloropsis oceanica|type=mRNA|length=1075bp CCCTCCCTCCCTCCCTCCCTCCCTTCAGCTCTCCCTCGGAAAAGGTGCTA GTGCTCTCGGGCTTCGGCGGCCCCCTGCTTAGCGTCGACTTCAAGGTGGT GGATGAGAAGGAGGGGAAGCTCCTCGTCACCTGTATGGATGGGAGCCACG CCATCGTATCCTTCAACCCCGACCATCCTGCCGACGCGGTCATCGAGAAA ACTCGCAAGGATCACGAGAAGCACGCGGTGATCGGCCGGTGGTCTCGTTG CGGGCGATGGTATGCCACGGGAGGGCACGACAAAGCCGTCCATCTGTACT CCACTAAGGGAAAGGAAGAGCCGTTGAAGTCCTTCTACTTTCTAGGGAAC GTAGAGGCGCTTGCTTTCCTGGACCGTCCAGCAGCAGCAGCAGCAGCAGC AGCAGCAGGAGAAGAAGAGGCAGGAGAAGCAGTAGCATCAGCTGCAGAAG CAGCAGCTGCAGTAGCAGCAACAGGAGCAGCAGCGGAAGGGGAAGATGGT AACCCCTCCTCCCTTCTTGATCGTCGCCTCTCGAACGTGGCTTTCCTCAG CTACATCGATTGCTTCTCCTTCGAGAAGCACGTTTCGTTTACCGTCCTCT CTCTCGCCGTCTCGCCTTGCCAGCAATTCCTCTTGGCGGCCACCGACAAG TCTCGCGTCATTCTCTACCGTATCGGCCACCACGAACAACTCCGTTCCCT CTACGGGCACCGGTCAGACGAATACAGCAACCCGCGTGTCGCGTGGGACC GCACAGGGCACTACGTCTACTGCTCTTCTCAAGAAAAAAACGAGATCGTT GGCTGGTCCCTGGCCTCGGAGAGGGTGGAGGTGAAGCTCAAGGGACACGA AGGGCTGGTACGTGACGTCACATACGATCCTGCGTCCGGCTTGCTCGCCT CTGTCTCATACGACAAGACCTTAAGGCTGTGGCGGAAATAAGCTACCTAT ATATTTTAATATATCACAATCTTGTCCCTGCCGCTCGGGACTCCCTGGGT TCATGAGAGAGGAAATTATGGAAAGAAAAAGGAGCTGTGGTACAGAAGAA TCAAACAAAATGGGACGTGAGTCAT back to topprotein sequence of jgi.p|Nanoce1779_2|615508 >mRNA_12121-protein ID=mRNA_12121-protein|Name=jgi.p|Nanoce1779_2|615508|organism=Nannochloropsis oceanica|type=polypeptide|length=269bp MDGSHAIVSFNPDHPADAVIEKTRKDHEKHAVIGRWSRCGRWYATGGHDK AVHLYSTKGKEEPLKSFYFLGNVEALAFLDRPAAAAAAAAAGEEEAGEAV ASAAEAAAAVAATGAAAEGEDGNPSSLLDRRLSNVAFLSYIDCFSFEKHV SFTVLSLAVSPCQQFLLAATDKSRVILYRIGHHEQLRSLYGHRSDEYSNP RVAWDRTGHYVYCSSQEKNEIVGWSLASERVEVKLKGHEGLVRDVTYDPA SGLLASVSYDKTLRLWRK* back to topmRNA from alignment at scaffold_102:39281..41700- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_12121 ID=mRNA_12121|Name=jgi.p|Nanoce1779_2|615508|organism=Nannochloropsis oceanica|type=mRNA|length=2420bp|location=Sequence derived from alignment at scaffold_102:39281..41700- (Nannochloropsis oceanica) CCCTCCCTCCCTCCCTCCCTCCCTTCAGCTCTCCCTCGGAAAAGGTGCTA
GTGCTCTCGGGCTTCGGCGGCCCCCTGCTTAGCGTCGACTTCAAGGTGGT
GGATGAGAAGGAGGTGAGGGAGGGAGGGCGGGAGAATGAGAGAGGGAGGG
AGTTAGGGAGGGAATACATGGATAGCCCACGGATGATAGTCGGGTCTCAC
ACGTATACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCATCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCATCCCTCCCTCCATCCCTCCCTCCCTCCCTCCCTCCATCCCTCCA
TCCCTCCCTCCCTCCTTCAGGGGAAGCTCCTCGTCACCTGTATGGATGGG
AGCCACGCCATCGTATCCTTCAACCCCGACCATCCTGCCGACGCGGTCAT
CGAGAAAACTCGCAAGGTCCGCCCTTCCTCCCTTCCTCCCTTCCTCCCTC
CCTCCCTCCCTCCCCACACACTTACCGACCTCCCTCCCTCCCTCCCTCAG
GATCACGAGAAGCACGCGGTGATCGGCCGGTGGTCTCGTTGCGGGCGATG
GTATGCCACGGGAGGGCACGACAAGTAAGGAGGGAGGGGGGGGGGGAGAG
AGGGAGGGAGGAGGGAGGGGGGGGAGAAGACGAGGGGTGCACATATCCCT
ACTTATGATTTCACGTCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCTCCAGAGCCGTCCATCTGTACTCCACTAA
GGGAAAGGAAGAGCCGTTGAAGTCCTTCTACTTTCTAGGGAACGTAGAGG
CGCTTGCTTTCCTGGACCGTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GGAGAAGAAGAGGCAGGAGAAGCAGTAGCATCAGCTGCAGAAGCAGCAGC
TGCAGTAGCAGCAACAGGAGCAGCAGCGGAAGGGGAAGATGGTAAGTAGG
CGGTGATGGAAGAAGAGGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
GGAGGGAGGGAGGGAGTGAGGGAGGAGGGCATATATGGACAGAAATTGGG
ATTTAAGGCATTCGTGACTCTCTTTCCCTCCCCTCCTTTCAGCCCCTCCT
CCCTTCTTGATCGTCGCCTCTCGAACGTGGCTTTCCTCAGCTACATCGAT
TGCTTCTCCTTCGAGAAGGTGAATGTGTCCCTCAACAATGCCCTGTGGGA
TAGCACGTTTCGTTTACCGTCCTCTCTCTCGCCGTCTCGCCTTGCCAGCA
ATTCCTCTTGGCGGCCACCGGTAAACCCTTCCTCGATCCCGTCCCTCCCT
CCCTCCCTCCTTCCCGCCCTCCTCTCCTCCCCCTCCTCTATCTCCCATCC
TTCTCCCTCCTTTCTTCCCTCTCTCCTTCCCTCTCACATCTTTCCTCGTT
TATTTCTCTCCTCTCTCGTCAACCTTATTATTTCTTAGACCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCTCTCCCTCCCTCCCTTCCTCCCT
TCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCCCCCACCCTGTCCCCCTTT
AGACAAGTCTCGCGTCATTCTCTACCGTATCGGCCACCACGAACAACTCC
GTTCCCTCTACGGGCACCGGTCAGACGAATACAGGTATAACAAGCCTTTA
ATCCTCCCCTCATTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCGAGCCG
GGTACGCACCCTGTGTCGTCACCAGAGTCTTCCTCCCTCCCTCCCTCTCT
TCCTCCCTTCTTCCCTCTCAAGCAACCCGCGTGTCGCGTGGGACCGCACA
GGGCACTACGTCTACTGCTCTTCTCAAGAAAAAAACGAGATCGTTGGCTG
GTCCCTGGCCTCGGAGAGGGTGGAGGTGAAGCTCAAGGTAGAGAGGAGAG
GAGGATAGGAGGGAGGGAAGAAAAAGCAGTGAATTTCTTTGGAAAGAATA
GAGAAGGACGCGAGGGCCTTCCATATCCATATGTAGGACGCAGATTGAGA
TACACCCATCTCATCATACTCAAGACTTCACTTCCTTTCTTTTCCTCCTT
CCCTTCCTCCCTCCTTCCCTCCCTCTGCTTTCTCCAGGGACACGAAGGGC
TGGTACGTGACGTCACATACGATCCTGCGTCCGGCTTGCTCGCCTCTGTC
TCATACGACAAGACCTTAAGGCTGTGGCGGAAATAAGCTACCTATATATT
TTAATATATCACAATCTTGTCCCTGCCGCTCGGGACTCCCTGGGTTCATG
AGAGAGGAAATTATGGAAAGAAAAAGGAGCTGTGGTACAGAAGAATCAAA
CAAAATGGGACGTGAGTCAT back to topCoding sequence (CDS) from alignment at scaffold_102:39281..41700- >mRNA_12121 ID=mRNA_12121|Name=jgi.p|Nanoce1779_2|615508|organism=Nannochloropsis oceanica|type=CDS|length=6456bp|location=Sequence derived from alignment at scaffold_102:39281..41700- (Nannochloropsis oceanica) GGACACGAAGGGCTGGTACGTGACGTCACATACGATCCTGCGTCCGGCTT GCTCGCCTCTGTCTCATACGACAAGACCTTAAGGCTGTGGCGGAAATAAC AACCCGCGTGTCGCGTGGGACCGCACAGGGCACTACGTCTACTGCTCTTC TCAAGAAAAAAACGAGATCGTTGGCTGGTCCCTGGCCTCGGAGAGGGTGG AGGTGAAGCTCAAGACAAGTCTCGCGTCATTCTCTACCGTATCGGCCACC ACGAACAACTCCGTTCCCTCTACGGGCACCGGTCAGACGAATACAGCACG TTTCGTTTACCGTCCTCTCTCTCGCCGTCTCGCCTTGCCAGCAATTCCTC TTGGCGGCCACCGCCCCTCCTCCCTTCTTGATCGTCGCCTCTCGAACGTG GCTTTCCTCAGCTACATCGATTGCTTCTCCTTCGAGAAGAGCCGTCCATC TGTACTCCACTAAGGGAAAGGAAGAGCCGTTGAAGTCCTTCTACTTTCTA GGGAACGTAGAGGCGCTTGCTTTCCTGGACCGTCCAGCAGCAGCAGCAGC AGCAGCAGCAGCAGGAGAAGAAGAGGCAGGAGAAGCAGTAGCATCAGCTG CAGAAGCAGCAGCTGCAGTAGCAGCAACAGGAGCAGCAGCGGAAGGGGAA GATGGTAAGATCACGAGAAGCACGCGGTGATCGGCCGGTGGTCTCGTTGC GGGCGATGGTATGCCACGGGAGGGCACGACAAATGGATGGGAGCCACGCC ATCGTATCCTTCAACCCCGACCATCCTGCCGACGCGGTCATCGAGAAAAC TCGCAAGGGACACGAAGGGCTGGTACGTGACGTCACATACGATCCTGCGT CCGGCTTGCTCGCCTCTGTCTCATACGACAAGACCTTAAGGCTGTGGCGG AAATAACAACCCGCGTGTCGCGTGGGACCGCACAGGGCACTACGTCTACT GCTCTTCTCAAGAAAAAAACGAGATCGTTGGCTGGTCCCTGGCCTCGGAG AGGGTGGAGGTGAAGCTCAAGACAAGTCTCGCGTCATTCTCTACCGTATC GGCCACCACGAACAACTCCGTTCCCTCTACGGGCACCGGTCAGACGAATA CAGCACGTTTCGTTTACCGTCCTCTCTCTCGCCGTCTCGCCTTGCCAGCA ATTCCTCTTGGCGGCCACCGCCCCTCCTCCCTTCTTGATCGTCGCCTCTC GAACGTGGCTTTCCTCAGCTACATCGATTGCTTCTCCTTCGAGAAGAGCC GTCCATCTGTACTCCACTAAGGGAAAGGAAGAGCCGTTGAAGTCCTTCTA CTTTCTAGGGAACGTAGAGGCGCTTGCTTTCCTGGACCGTCCAGCAGCAG CAGCAGCAGCAGCAGCAGCAGGAGAAGAAGAGGCAGGAGAAGCAGTAGCA TCAGCTGCAGAAGCAGCAGCTGCAGTAGCAGCAACAGGAGCAGCAGCGGA AGGGGAAGATGGTAAGATCACGAGAAGCACGCGGTGATCGGCCGGTGGTC TCGTTGCGGGCGATGGTATGCCACGGGAGGGCACGACAAATGGATGGGAG CCACGCCATCGTATCCTTCAACCCCGACCATCCTGCCGACGCGGTCATCG AGAAAACTCGCAAGGGACACGAAGGGCTGGTACGTGACGTCACATACGAT CCTGCGTCCGGCTTGCTCGCCTCTGTCTCATACGACAAGACCTTAAGGCT GTGGCGGAAATAACAACCCGCGTGTCGCGTGGGACCGCACAGGGCACTAC GTCTACTGCTCTTCTCAAGAAAAAAACGAGATCGTTGGCTGGTCCCTGGC CTCGGAGAGGGTGGAGGTGAAGCTCAAGACAAGTCTCGCGTCATTCTCTA CCGTATCGGCCACCACGAACAACTCCGTTCCCTCTACGGGCACCGGTCAG ACGAATACAGCACGTTTCGTTTACCGTCCTCTCTCTCGCCGTCTCGCCTT GCCAGCAATTCCTCTTGGCGGCCACCGCCCCTCCTCCCTTCTTGATCGTC GCCTCTCGAACGTGGCTTTCCTCAGCTACATCGATTGCTTCTCCTTCGAG AAGAGCCGTCCATCTGTACTCCACTAAGGGAAAGGAAGAGCCGTTGAAGT CCTTCTACTTTCTAGGGAACGTAGAGGCGCTTGCTTTCCTGGACCGTCCA GCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGAAGAAGAGGCAGGAGAAGC AGTAGCATCAGCTGCAGAAGCAGCAGCTGCAGTAGCAGCAACAGGAGCAG CAGCGGAAGGGGAAGATGGTAAGATCACGAGAAGCACGCGGTGATCGGCC GGTGGTCTCGTTGCGGGCGATGGTATGCCACGGGAGGGCACGACAAATGG ATGGGAGCCACGCCATCGTATCCTTCAACCCCGACCATCCTGCCGACGCG GTCATCGAGAAAACTCGCAAGGGACACGAAGGGCTGGTACGTGACGTCAC ATACGATCCTGCGTCCGGCTTGCTCGCCTCTGTCTCATACGACAAGACCT TAAGGCTGTGGCGGAAATAACAACCCGCGTGTCGCGTGGGACCGCACAGG GCACTACGTCTACTGCTCTTCTCAAGAAAAAAACGAGATCGTTGGCTGGT CCCTGGCCTCGGAGAGGGTGGAGGTGAAGCTCAAGACAAGTCTCGCGTCA TTCTCTACCGTATCGGCCACCACGAACAACTCCGTTCCCTCTACGGGCAC CGGTCAGACGAATACAGCACGTTTCGTTTACCGTCCTCTCTCTCGCCGTC TCGCCTTGCCAGCAATTCCTCTTGGCGGCCACCGCCCCTCCTCCCTTCTT GATCGTCGCCTCTCGAACGTGGCTTTCCTCAGCTACATCGATTGCTTCTC CTTCGAGAAGAGCCGTCCATCTGTACTCCACTAAGGGAAAGGAAGAGCCG TTGAAGTCCTTCTACTTTCTAGGGAACGTAGAGGCGCTTGCTTTCCTGGA CCGTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGAAGAAGAGGCAG GAGAAGCAGTAGCATCAGCTGCAGAAGCAGCAGCTGCAGTAGCAGCAACA GGAGCAGCAGCGGAAGGGGAAGATGGTAAGATCACGAGAAGCACGCGGTG ATCGGCCGGTGGTCTCGTTGCGGGCGATGGTATGCCACGGGAGGGCACGA CAAATGGATGGGAGCCACGCCATCGTATCCTTCAACCCCGACCATCCTGC CGACGCGGTCATCGAGAAAACTCGCAAGGGACACGAAGGGCTGGTACGTG ACGTCACATACGATCCTGCGTCCGGCTTGCTCGCCTCTGTCTCATACGAC AAGACCTTAAGGCTGTGGCGGAAATAACAACCCGCGTGTCGCGTGGGACC GCACAGGGCACTACGTCTACTGCTCTTCTCAAGAAAAAAACGAGATCGTT GGCTGGTCCCTGGCCTCGGAGAGGGTGGAGGTGAAGCTCAAGACAAGTCT CGCGTCATTCTCTACCGTATCGGCCACCACGAACAACTCCGTTCCCTCTA CGGGCACCGGTCAGACGAATACAGCACGTTTCGTTTACCGTCCTCTCTCT CGCCGTCTCGCCTTGCCAGCAATTCCTCTTGGCGGCCACCGCCCCTCCTC CCTTCTTGATCGTCGCCTCTCGAACGTGGCTTTCCTCAGCTACATCGATT GCTTCTCCTTCGAGAAGAGCCGTCCATCTGTACTCCACTAAGGGAAAGGA AGAGCCGTTGAAGTCCTTCTACTTTCTAGGGAACGTAGAGGCGCTTGCTT TCCTGGACCGTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGAAGAA GAGGCAGGAGAAGCAGTAGCATCAGCTGCAGAAGCAGCAGCTGCAGTAGC AGCAACAGGAGCAGCAGCGGAAGGGGAAGATGGTAAGATCACGAGAAGCA CGCGGTGATCGGCCGGTGGTCTCGTTGCGGGCGATGGTATGCCACGGGAG GGCACGACAAATGGATGGGAGCCACGCCATCGTATCCTTCAACCCCGACC ATCCTGCCGACGCGGTCATCGAGAAAACTCGCAAGGGACACGAAGGGCTG GTACGTGACGTCACATACGATCCTGCGTCCGGCTTGCTCGCCTCTGTCTC ATACGACAAGACCTTAAGGCTGTGGCGGAAATAACAACCCGCGTGTCGCG TGGGACCGCACAGGGCACTACGTCTACTGCTCTTCTCAAGAAAAAAACGA GATCGTTGGCTGGTCCCTGGCCTCGGAGAGGGTGGAGGTGAAGCTCAAGA CAAGTCTCGCGTCATTCTCTACCGTATCGGCCACCACGAACAACTCCGTT CCCTCTACGGGCACCGGTCAGACGAATACAGCACGTTTCGTTTACCGTCC TCTCTCTCGCCGTCTCGCCTTGCCAGCAATTCCTCTTGGCGGCCACCGCC CCTCCTCCCTTCTTGATCGTCGCCTCTCGAACGTGGCTTTCCTCAGCTAC ATCGATTGCTTCTCCTTCGAGAAGAGCCGTCCATCTGTACTCCACTAAGG GAAAGGAAGAGCCGTTGAAGTCCTTCTACTTTCTAGGGAACGTAGAGGCG CTTGCTTTCCTGGACCGTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGG AGAAGAAGAGGCAGGAGAAGCAGTAGCATCAGCTGCAGAAGCAGCAGCTG CAGTAGCAGCAACAGGAGCAGCAGCGGAAGGGGAAGATGGTAAGATCACG AGAAGCACGCGGTGATCGGCCGGTGGTCTCGTTGCGGGCGATGGTATGCC ACGGGAGGGCACGACAAATGGATGGGAGCCACGCCATCGTATCCTTCAAC CCCGACCATCCTGCCGACGCGGTCATCGAGAAAACTCGCAAGGGACACGA AGGGCTGGTACGTGACGTCACATACGATCCTGCGTCCGGCTTGCTCGCCT CTGTCTCATACGACAAGACCTTAAGGCTGTGGCGGAAATAACAACCCGCG TGTCGCGTGGGACCGCACAGGGCACTACGTCTACTGCTCTTCTCAAGAAA AAAACGAGATCGTTGGCTGGTCCCTGGCCTCGGAGAGGGTGGAGGTGAAG CTCAAGACAAGTCTCGCGTCATTCTCTACCGTATCGGCCACCACGAACAA CTCCGTTCCCTCTACGGGCACCGGTCAGACGAATACAGCACGTTTCGTTT ACCGTCCTCTCTCTCGCCGTCTCGCCTTGCCAGCAATTCCTCTTGGCGGC CACCGCCCCTCCTCCCTTCTTGATCGTCGCCTCTCGAACGTGGCTTTCCT CAGCTACATCGATTGCTTCTCCTTCGAGAAGAGCCGTCCATCTGTACTCC ACTAAGGGAAAGGAAGAGCCGTTGAAGTCCTTCTACTTTCTAGGGAACGT AGAGGCGCTTGCTTTCCTGGACCGTCCAGCAGCAGCAGCAGCAGCAGCAG CAGCAGGAGAAGAAGAGGCAGGAGAAGCAGTAGCATCAGCTGCAGAAGCA GCAGCTGCAGTAGCAGCAACAGGAGCAGCAGCGGAAGGGGAAGATGGTAA GATCACGAGAAGCACGCGGTGATCGGCCGGTGGTCTCGTTGCGGGCGATG GTATGCCACGGGAGGGCACGACAAATGGATGGGAGCCACGCCATCGTATC CTTCAACCCCGACCATCCTGCCGACGCGGTCATCGAGAAAACTCGCAAGG GACACGAAGGGCTGGTACGTGACGTCACATACGATCCTGCGTCCGGCTTG CTCGCCTCTGTCTCATACGACAAGACCTTAAGGCTGTGGCGGAAATAACA ACCCGCGTGTCGCGTGGGACCGCACAGGGCACTACGTCTACTGCTCTTCT CAAGAAAAAAACGAGATCGTTGGCTGGTCCCTGGCCTCGGAGAGGGTGGA GGTGAAGCTCAAGACAAGTCTCGCGTCATTCTCTACCGTATCGGCCACCA CGAACAACTCCGTTCCCTCTACGGGCACCGGTCAGACGAATACAGCACGT TTCGTTTACCGTCCTCTCTCTCGCCGTCTCGCCTTGCCAGCAATTCCTCT TGGCGGCCACCGCCCCTCCTCCCTTCTTGATCGTCGCCTCTCGAACGTGG CTTTCCTCAGCTACATCGATTGCTTCTCCTTCGAGAAGAGCCGTCCATCT GTACTCCACTAAGGGAAAGGAAGAGCCGTTGAAGTCCTTCTACTTTCTAG GGAACGTAGAGGCGCTTGCTTTCCTGGACCGTCCAGCAGCAGCAGCAGCA GCAGCAGCAGCAGGAGAAGAAGAGGCAGGAGAAGCAGTAGCATCAGCTGC AGAAGCAGCAGCTGCAGTAGCAGCAACAGGAGCAGCAGCGGAAGGGGAAG ATGGTAAGATCACGAGAAGCACGCGGTGATCGGCCGGTGGTCTCGTTGCG GGCGATGGTATGCCACGGGAGGGCACGACAAATGGATGGGAGCCACGCCA TCGTATCCTTCAACCCCGACCATCCTGCCGACGCGGTCATCGAGAAAACT CGCAAG back to top
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