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Properties
Property Name | Value |
TranscriptId | 675482 |
Track | FilteredModels2 |
ProteinId | 675396 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_102 | supercontig | scaffold_102:1..2981 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_12113 ID=mRNA_12113|Name=jgi.p|Nanoce1779_2|675396|organism=Nannochloropsis oceanica|type=mRNA|length=2981bp AGCAAACCATGAAGTGCCTGGTCCCGCTCCCCACCACCCTCCTAGTCCTG ATGGTTCTCCACTCCAGCATTATACCCTTTACCTATCGTTCTACTCCATC TCTCTTGTGCTGTGCAGCTCATGTCATGGTCGGAGACGACAGCAGCCTGG TTGAGGTGAAGCGCCGGTCTCTGTGGGAACTCTCCGTGGTCTGGGACAAG CTCGGACACTTTGTGGCGCGGCTCTGGCACGGTCACCACGACGAGGACGA GGAGTGCGAAAAGATAAGGCATCCACTATCAAAAACGATGTCCCTCTCCG CCAACGAGACGGCGACTACCCTGGTGACACAAAACGACTCGACACCCGTT ACAACCCACCGCCACCTACAAAAAGGGGTAGGGGAGCACAGCAAGGATAC AGAGCTTCGGGCCTTGAAAATGGTGCAGGTCTCACGGGCCCGGGACGTGA CTAGCCATGAGCGCTTGTGGGCGACGGTAATTGACGATGACAACATGGTG GACGAGAGGAAGAACGACGAAGACTACGTGCACCAGCAGACCACCACAGG CCCAAAACCCATTCTTGTGGGGGATCTCGTGGAGCATTACTCTTCTCTCA GCGCGGTATTGCAAGACATACCCGACAATGAGGATCCGGACACCTATTCA CTGAACATAAAGAACCCCTACCAGGAGTCGACCCTGCCTGTGTCTGATGC GCCTTTGTACCCGAAGCCAGGAGACCACACGAGGTCGCCTTATCACCCGG AGTCAGCAGAACACACAAGAGATATTGAGAGGGACGACGATAATGGGAAG ATTATCTATATGACATCATTCAAGACGGTGACGGGAGACGTGCCAACAGA ACAAGTGGAGGAGTTTTCCCAGGACGAACCCGAGAATTACGCCGACGATG TCATTGAGACCCACTTTTCCTCGCCCCATCACCAACGCCAGCTATTTATG CACCCTGAAGACTTTAAATTACATGCGCACAAGCATAACAACGACAAAAA AGACGAGAAAGTGGACCCTTACTACAGCAAGGACAATGGGCTATGGCGCC GCAAGTTCAAAGGACCCAAGACACCGCAAGGCTTTCCTCTCCCTGACAGC ACGAGCGAAGTGCGTCACCACCACATCCACCAACACCAGCGTCAGCTGCG AGAGCAAGCACGCGCCAACATGTCCGAGACCGAGCTAGCACAAATCCAAG AGGAAGCGCGGGAAGAGTTGGTGCAGGCTTTGCGCTCGGCGGCGCGCGAC GCCGAAGCGCATCGCACAGACTTGTCGGTAGGGAACAGTTTGGAATCGGT TATGAAAGCATTGGCAGTGCGTCGCCCTCCTGTGCCGGGCTTCACAATGG GCACTCCTATGGTGGAGACACAGCCACAGAACACCAAGGAACGTGAACAA GTGCGCTTGCCCGGGGATGGCATGCAGCCCAAGGTGGATAACCCTCTACC TCCCGGGCGGAAGCACCGTCGACTACGAGGCTTGCAGCAAGCAGGAGCTG CATCTGGTACTGGCGTGGGGGCGGCTTTGGCGGGCACTTTCACGGAGGCT CAGAAAGCGGAGTTGCGGCAAATGTTTTATGATGCAGCGCTGAGCATGAT GCGGGAGGCGGCCCGACAGGCTCTGAATACCAACCAGGGAGGAAGTAGTG GGGGTAGCAGCAACAGCATGTTTCCGTCGGCTAATGGGAATAATGTAGGC AGCAACGTGGTCAATCAAGATGCCTACACAGCGGCTCTGAACGCTATGAT CAATGCGGTCGGCTCCAAGGAAGTGAACAATGCTAACGGTGGCATTGCTT CGCACTCCGGTGGCCCCGGCGGCAAAGTGGAAAGCAGTGGCAAAAATGGC GGTGGCAGCGGGGCTCCCGCTAAAAAGCAAAGCCTCTTGGAAGTCGCCCG GGAGGTTGCTCGTCACAACAGTCCCTCGGCGGGTCGTCCTCCTATAGCTG CTGGGCGCCAACCAAATGGTCAGCGAAAGTTGCGGGGCTTAAAGACCACG GTCCGCCTCCCTGTGCCTTATACACGTAACTCTTCATCGAATGATACCTT GATATCCATAATCCGTAACGGGACTGATGCCATCTATGTGCCACTGCGAC ATGTGGATCCCTCCCTCCAGGAGGAGGCCTTTGCGCGACTTGGTCCTTTG GGTCCTATTATCCAAGGTGCAGCGGGGGCGATAGGTGGGGAGAGTGTCAA AGAGACTGAAGATGGGAAGCGTTTCTATGGAGGGCAAGGTAGCGTCACTA ATCCTTCGCATCCCAAGGGCCATGAGTGGGCTGAGTGGCTTTTAGTCCTG GTCAAGAAGCACAAGGCACATCAACACTGGCAGCAGGAAGAGCGTACGAC GCGCACCCTGACTGAGAGTGACGCAGCGGCTGCAGAAACTACAGACACTA CCACCACATCGCCCGCGGGTCTTGTCCAAGGCGATACAACAGCAGTCACT ACACCTACCGCGACGGCAACAACATCCAGCACTGCTAAGGTGCCGGGGGT GGGCAATGCGGACAATCCAAATTTGGACCTGGAAGCGCTGGCGGGCCTAC TGCAGCACCAATTTGTCCCTGCCGTGCCTGGAGGGATGGGCGATCACATA CAGAAGCCGGAAACAGCGTCTCAAACGGATGCGCTCGGAAACGTTATCAC GCACATGATGGGGCCCTTGGAGGTGGGGAAGAAAAAGCTGGAGAAAGGGA AAGAGAGGGAAGGAGACAAAAGCGCAAAGGACAAGCAGGGGAAGGAAGAC GAAGGAGAGACCGAACGCCCAGGTCTGGGGGATGCCTTTTATGATCGGGC CTCGAGCCATCTGATGTCTCACAGCGCCCGCAACTTTCAAAAGATGCAGG AAGCGGTTGGCAGCATCATGGCCCAGGAGGGGATTATGACATGGGAGGAC GGGATGGAAGGCTTTGGGGAATAAATTTGAAGGGAGAGAAGAAGAAAAGT AGGATAGAAGAGACGGAGAGGAATGAAAGCC back to topprotein sequence of jgi.p|Nanoce1779_2|675396 >mRNA_12113-protein ID=mRNA_12113-protein|Name=jgi.p|Nanoce1779_2|675396|organism=Nannochloropsis oceanica|type=polypeptide|length=972bp MKCLVPLPTTLLVLMVLHSSIIPFTYRSTPSLLCCAAHVMVGDDSSLVEV KRRSLWELSVVWDKLGHFVARLWHGHHDEDEECEKIRHPLSKTMSLSANE TATTLVTQNDSTPVTTHRHLQKGVGEHSKDTELRALKMVQVSRARDVTSH ERLWATVIDDDNMVDERKNDEDYVHQQTTTGPKPILVGDLVEHYSSLSAV LQDIPDNEDPDTYSLNIKNPYQESTLPVSDAPLYPKPGDHTRSPYHPESA EHTRDIERDDDNGKIIYMTSFKTVTGDVPTEQVEEFSQDEPENYADDVIE THFSSPHHQRQLFMHPEDFKLHAHKHNNDKKDEKVDPYYSKDNGLWRRKF KGPKTPQGFPLPDSTSEVRHHHIHQHQRQLREQARANMSETELAQIQEEA REELVQALRSAARDAEAHRTDLSVGNSLESVMKALAVRRPPVPGFTMGTP MVETQPQNTKEREQVRLPGDGMQPKVDNPLPPGRKHRRLRGLQQAGAASG TGVGAALAGTFTEAQKAELRQMFYDAALSMMREAARQALNTNQGGSSGGS SNSMFPSANGNNVGSNVVNQDAYTAALNAMINAVGSKEVNNANGGIASHS GGPGGKVESSGKNGGGSGAPAKKQSLLEVAREVARHNSPSAGRPPIAAGR QPNGQRKLRGLKTTVRLPVPYTRNSSSNDTLISIIRNGTDAIYVPLRHVD PSLQEEAFARLGPLGPIIQGAAGAIGGESVKETEDGKRFYGGQGSVTNPS HPKGHEWAEWLLVLVKKHKAHQHWQQEERTTRTLTESDAAAAETTDTTTT SPAGLVQGDTTAVTTPTATATTSSTAKVPGVGNADNPNLDLEALAGLLQH QFVPAVPGGMGDHIQKPETASQTDALGNVITHMMGPLEVGKKKLEKGKER EGDKSAKDKQGKEDEGETERPGLGDAFYDRASSHLMSHSARNFQKMQEAV GSIMAQEGIMTWEDGMEGFGE* back to topmRNA from alignment at scaffold_102:1..2981- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_12113 ID=mRNA_12113|Name=jgi.p|Nanoce1779_2|675396|organism=Nannochloropsis oceanica|type=mRNA|length=2981bp|location=Sequence derived from alignment at scaffold_102:1..2981- (Nannochloropsis oceanica) AGCAAACCATGAAGTGCCTGGTCCCGCTCCCCACCACCCTCCTAGTCCTG
ATGGTTCTCCACTCCAGCATTATACCCTTTACCTATCGTTCTACTCCATC
TCTCTTGTGCTGTGCAGCTCATGTCATGGTCGGAGACGACAGCAGCCTGG
TTGAGGTGAAGCGCCGGTCTCTGTGGGAACTCTCCGTGGTCTGGGACAAG
CTCGGACACTTTGTGGCGCGGCTCTGGCACGGTCACCACGACGAGGACGA
GGAGTGCGAAAAGATAAGGCATCCACTATCAAAAACGATGTCCCTCTCCG
CCAACGAGACGGCGACTACCCTGGTGACACAAAACGACTCGACACCCGTT
ACAACCCACCGCCACCTACAAAAAGGGGTAGGGGAGCACAGCAAGGATAC
AGAGCTTCGGGCCTTGAAAATGGTGCAGGTCTCACGGGCCCGGGACGTGA
CTAGCCATGAGCGCTTGTGGGCGACGGTAATTGACGATGACAACATGGTG
GACGAGAGGAAGAACGACGAAGACTACGTGCACCAGCAGACCACCACAGG
CCCAAAACCCATTCTTGTGGGGGATCTCGTGGAGCATTACTCTTCTCTCA
GCGCGGTATTGCAAGACATACCCGACAATGAGGATCCGGACACCTATTCA
CTGAACATAAAGAACCCCTACCAGGAGTCGACCCTGCCTGTGTCTGATGC
GCCTTTGTACCCGAAGCCAGGAGACCACACGAGGTCGCCTTATCACCCGG
AGTCAGCAGAACACACAAGAGATATTGAGAGGGACGACGATAATGGGAAG
ATTATCTATATGACATCATTCAAGACGGTGACGGGAGACGTGCCAACAGA
ACAAGTGGAGGAGTTTTCCCAGGACGAACCCGAGAATTACGCCGACGATG
TCATTGAGACCCACTTTTCCTCGCCCCATCACCAACGCCAGCTATTTATG
CACCCTGAAGACTTTAAATTACATGCGCACAAGCATAACAACGACAAAAA
AGACGAGAAAGTGGACCCTTACTACAGCAAGGACAATGGGCTATGGCGCC
GCAAGTTCAAAGGACCCAAGACACCGCAAGGCTTTCCTCTCCCTGACAGC
ACGAGCGAAGTGCGTCACCACCACATCCACCAACACCAGCGTCAGCTGCG
AGAGCAAGCACGCGCCAACATGTCCGAGACCGAGCTAGCACAAATCCAAG
AGGAAGCGCGGGAAGAGTTGGTGCAGGCTTTGCGCTCGGCGGCGCGCGAC
GCCGAAGCGCATCGCACAGACTTGTCGGTAGGGAACAGTTTGGAATCGGT
TATGAAAGCATTGGCAGTGCGTCGCCCTCCTGTGCCGGGCTTCACAATGG
GCACTCCTATGGTGGAGACACAGCCACAGAACACCAAGGAACGTGAACAA
GTGCGCTTGCCCGGGGATGGCATGCAGCCCAAGGTGGATAACCCTCTACC
TCCCGGGCGGAAGCACCGTCGACTACGAGGCTTGCAGCAAGCAGGAGCTG
CATCTGGTACTGGCGTGGGGGCGGCTTTGGCGGGCACTTTCACGGAGGCT
CAGAAAGCGGAGTTGCGGCAAATGTTTTATGATGCAGCGCTGAGCATGAT
GCGGGAGGCGGCCCGACAGGCTCTGAATACCAACCAGGGAGGAAGTAGTG
GGGGTAGCAGCAACAGCATGTTTCCGTCGGCTAATGGGAATAATGTAGGC
AGCAACGTGGTCAATCAAGATGCCTACACAGCGGCTCTGAACGCTATGAT
CAATGCGGTCGGCTCCAAGGAAGTGAACAATGCTAACGGTGGCATTGCTT
CGCACTCCGGTGGCCCCGGCGGCAAAGTGGAAAGCAGTGGCAAAAATGGC
GGTGGCAGCGGGGCTCCCGCTAAAAAGCAAAGCCTCTTGGAAGTCGCCCG
GGAGGTTGCTCGTCACAACAGTCCCTCGGCGGGTCGTCCTCCTATAGCTG
CTGGGCGCCAACCAAATGGTCAGCGAAAGTTGCGGGGCTTAAAGACCACG
GTCCGCCTCCCTGTGCCTTATACACGTAACTCTTCATCGAATGATACCTT
GATATCCATAATCCGTAACGGGACTGATGCCATCTATGTGCCACTGCGAC
ATGTGGATCCCTCCCTCCAGGAGGAGGCCTTTGCGCGACTTGGTCCTTTG
GGTCCTATTATCCAAGGTGCAGCGGGGGCGATAGGTGGGGAGAGTGTCAA
AGAGACTGAAGATGGGAAGCGTTTCTATGGAGGGCAAGGTAGCGTCACTA
ATCCTTCGCATCCCAAGGGCCATGAGTGGGCTGAGTGGCTTTTAGTCCTG
GTCAAGAAGCACAAGGCACATCAACACTGGCAGCAGGAAGAGCGTACGAC
GCGCACCCTGACTGAGAGTGACGCAGCGGCTGCAGAAACTACAGACACTA
CCACCACATCGCCCGCGGGTCTTGTCCAAGGCGATACAACAGCAGTCACT
ACACCTACCGCGACGGCAACAACATCCAGCACTGCTAAGGTGCCGGGGGT
GGGCAATGCGGACAATCCAAATTTGGACCTGGAAGCGCTGGCGGGCCTAC
TGCAGCACCAATTTGTCCCTGCCGTGCCTGGAGGGATGGGCGATCACATA
CAGAAGCCGGAAACAGCGTCTCAAACGGATGCGCTCGGAAACGTTATCAC
GCACATGATGGGGCCCTTGGAGGTGGGGAAGAAAAAGCTGGAGAAAGGGA
AAGAGAGGGAAGGAGACAAAAGCGCAAAGGACAAGCAGGGGAAGGAAGAC
GAAGGAGAGACCGAACGCCCAGGTCTGGGGGATGCCTTTTATGATCGGGC
CTCGAGCCATCTGATGTCTCACAGCGCCCGCAACTTTCAAAAGATGCAGG
AAGCGGTTGGCAGCATCATGGCCCAGGAGGGGATTATGACATGGGAGGAC
GGGATGGAAGGCTTTGGGGAATAAATTTGAAGGGAGAGAAGAAGAAAAGT
AGGATAGAAGAGACGGAGAGGAATGAAAGCC back to topCoding sequence (CDS) from alignment at scaffold_102:1..2981- >mRNA_12113 ID=mRNA_12113|Name=jgi.p|Nanoce1779_2|675396|organism=Nannochloropsis oceanica|type=CDS|length=2916bp|location=Sequence derived from alignment at scaffold_102:1..2981- (Nannochloropsis oceanica) ATGAAGTGCCTGGTCCCGCTCCCCACCACCCTCCTAGTCCTGATGGTTCT CCACTCCAGCATTATACCCTTTACCTATCGTTCTACTCCATCTCTCTTGT GCTGTGCAGCTCATGTCATGGTCGGAGACGACAGCAGCCTGGTTGAGGTG AAGCGCCGGTCTCTGTGGGAACTCTCCGTGGTCTGGGACAAGCTCGGACA CTTTGTGGCGCGGCTCTGGCACGGTCACCACGACGAGGACGAGGAGTGCG AAAAGATAAGGCATCCACTATCAAAAACGATGTCCCTCTCCGCCAACGAG ACGGCGACTACCCTGGTGACACAAAACGACTCGACACCCGTTACAACCCA CCGCCACCTACAAAAAGGGGTAGGGGAGCACAGCAAGGATACAGAGCTTC GGGCCTTGAAAATGGTGCAGGTCTCACGGGCCCGGGACGTGACTAGCCAT GAGCGCTTGTGGGCGACGGTAATTGACGATGACAACATGGTGGACGAGAG GAAGAACGACGAAGACTACGTGCACCAGCAGACCACCACAGGCCCAAAAC CCATTCTTGTGGGGGATCTCGTGGAGCATTACTCTTCTCTCAGCGCGGTA TTGCAAGACATACCCGACAATGAGGATCCGGACACCTATTCACTGAACAT AAAGAACCCCTACCAGGAGTCGACCCTGCCTGTGTCTGATGCGCCTTTGT ACCCGAAGCCAGGAGACCACACGAGGTCGCCTTATCACCCGGAGTCAGCA GAACACACAAGAGATATTGAGAGGGACGACGATAATGGGAAGATTATCTA TATGACATCATTCAAGACGGTGACGGGAGACGTGCCAACAGAACAAGTGG AGGAGTTTTCCCAGGACGAACCCGAGAATTACGCCGACGATGTCATTGAG ACCCACTTTTCCTCGCCCCATCACCAACGCCAGCTATTTATGCACCCTGA AGACTTTAAATTACATGCGCACAAGCATAACAACGACAAAAAAGACGAGA AAGTGGACCCTTACTACAGCAAGGACAATGGGCTATGGCGCCGCAAGTTC AAAGGACCCAAGACACCGCAAGGCTTTCCTCTCCCTGACAGCACGAGCGA AGTGCGTCACCACCACATCCACCAACACCAGCGTCAGCTGCGAGAGCAAG CACGCGCCAACATGTCCGAGACCGAGCTAGCACAAATCCAAGAGGAAGCG CGGGAAGAGTTGGTGCAGGCTTTGCGCTCGGCGGCGCGCGACGCCGAAGC GCATCGCACAGACTTGTCGGTAGGGAACAGTTTGGAATCGGTTATGAAAG CATTGGCAGTGCGTCGCCCTCCTGTGCCGGGCTTCACAATGGGCACTCCT ATGGTGGAGACACAGCCACAGAACACCAAGGAACGTGAACAAGTGCGCTT GCCCGGGGATGGCATGCAGCCCAAGGTGGATAACCCTCTACCTCCCGGGC GGAAGCACCGTCGACTACGAGGCTTGCAGCAAGCAGGAGCTGCATCTGGT ACTGGCGTGGGGGCGGCTTTGGCGGGCACTTTCACGGAGGCTCAGAAAGC GGAGTTGCGGCAAATGTTTTATGATGCAGCGCTGAGCATGATGCGGGAGG CGGCCCGACAGGCTCTGAATACCAACCAGGGAGGAAGTAGTGGGGGTAGC AGCAACAGCATGTTTCCGTCGGCTAATGGGAATAATGTAGGCAGCAACGT GGTCAATCAAGATGCCTACACAGCGGCTCTGAACGCTATGATCAATGCGG TCGGCTCCAAGGAAGTGAACAATGCTAACGGTGGCATTGCTTCGCACTCC GGTGGCCCCGGCGGCAAAGTGGAAAGCAGTGGCAAAAATGGCGGTGGCAG CGGGGCTCCCGCTAAAAAGCAAAGCCTCTTGGAAGTCGCCCGGGAGGTTG CTCGTCACAACAGTCCCTCGGCGGGTCGTCCTCCTATAGCTGCTGGGCGC CAACCAAATGGTCAGCGAAAGTTGCGGGGCTTAAAGACCACGGTCCGCCT CCCTGTGCCTTATACACGTAACTCTTCATCGAATGATACCTTGATATCCA TAATCCGTAACGGGACTGATGCCATCTATGTGCCACTGCGACATGTGGAT CCCTCCCTCCAGGAGGAGGCCTTTGCGCGACTTGGTCCTTTGGGTCCTAT TATCCAAGGTGCAGCGGGGGCGATAGGTGGGGAGAGTGTCAAAGAGACTG AAGATGGGAAGCGTTTCTATGGAGGGCAAGGTAGCGTCACTAATCCTTCG CATCCCAAGGGCCATGAGTGGGCTGAGTGGCTTTTAGTCCTGGTCAAGAA GCACAAGGCACATCAACACTGGCAGCAGGAAGAGCGTACGACGCGCACCC TGACTGAGAGTGACGCAGCGGCTGCAGAAACTACAGACACTACCACCACA TCGCCCGCGGGTCTTGTCCAAGGCGATACAACAGCAGTCACTACACCTAC CGCGACGGCAACAACATCCAGCACTGCTAAGGTGCCGGGGGTGGGCAATG CGGACAATCCAAATTTGGACCTGGAAGCGCTGGCGGGCCTACTGCAGCAC CAATTTGTCCCTGCCGTGCCTGGAGGGATGGGCGATCACATACAGAAGCC GGAAACAGCGTCTCAAACGGATGCGCTCGGAAACGTTATCACGCACATGA TGGGGCCCTTGGAGGTGGGGAAGAAAAAGCTGGAGAAAGGGAAAGAGAGG GAAGGAGACAAAAGCGCAAAGGACAAGCAGGGGAAGGAAGACGAAGGAGA GACCGAACGCCCAGGTCTGGGGGATGCCTTTTATGATCGGGCCTCGAGCC ATCTGATGTCTCACAGCGCCCGCAACTTTCAAAAGATGCAGGAAGCGGTT GGCAGCATCATGGCCCAGGAGGGGATTATGACATGGGAGGACGGGATGGA AGGCTTTGGGGAATAA back to top
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