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Properties
| Property Name | Value |
|---|
| TranscriptId | 616260 |
| Track | FilteredModels2 |
| ProteinId | 616174 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_113 | supercontig | scaffold_113:33800..35479 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_12103 ID=mRNA_12103|Name=jgi.p|Nanoce1779_2|616174|organism=Nannochloropsis oceanica|type=mRNA|length=737bp
AGCATTCAAACAAGTGCGGTACGGGTTCGCCGCCACGAGGTGCTCCGTGC
TTAAACTCAGCAGCATCATTCTCAACGAGCTCATCGCGCATGGCTTGCCA
GCTACCAGCCTCTCGGCGTGTGGGGTGTGGAACACAGTCAAAGGGGAAGT
AACCAAGAGCAACACCCGCGCTGTGGTCGATTTGCTGGCCCTGGGTTTCA
TCGCCGTCATGCACGGAGATGGTGTCTTAGACGCAGTAAAGGGCTGCAAC
GTCCTCAGCGGAGACACCATCATCCGTCAGCTGGCCCAGGATGTACCGGA
CGTTTCCAGGGTGAAATCGAGATTCCTCCCCCCCCCCCCTTCCTCCTCCT
CCTCCTCCTCCTCCCTCCCTTCCCCATCGTCCTCCGCGCTGTGTACGGAC
AGTGGAAGCAAAGGCGATGACGTTACGGGGGGAATGCGACTCAAGCTCAG
CACTGCGATCTCCATCCAGGTGGATCATGGTGGCCGCGTGCCGGTGTTTA
TTTCGAAAGTTGGCTCTGAGGCATCAGTCAGGGCATGTCTGGAGGGAGAG
GTGGGAGACAAAGCGACGAAGCTGTGTGGGAAGTAGAGGGAGGAAGGGAA
GGGAAGGAAGGAAAGAGGGAGGGCAGCACGTGGGAGTGGCGATGTGAGAG
TCTCGCGGGATGTCACCGATACAAAACGAAGATCCCAAAGCGGAAGAGAA
GGAGGGAGGAAAGGAAAGGAAGAATGAATCAAACCAC back to topprotein sequence of jgi.p|Nanoce1779_2|616174 >mRNA_12103-protein ID=mRNA_12103-protein|Name=jgi.p|Nanoce1779_2|616174|organism=Nannochloropsis oceanica|type=polypeptide|length=126bp
MHGDGVLDAVKGCNVLSGDTIIRQLAQDVPDVSRVKSRFLPPPPSSSSSS
SSLPSPSSSALCTDSGSKGDDVTGGMRLKLSTAISIQVDHGGRVPVFISK
VGSEASVRACLEGEVGDKATKLCGK* back to topmRNA from alignment at scaffold_113:33800..35479- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_12103 ID=mRNA_12103|Name=jgi.p|Nanoce1779_2|616174|organism=Nannochloropsis oceanica|type=mRNA|length=1680bp|location=Sequence derived from alignment at scaffold_113:33800..35479- (Nannochloropsis oceanica)
AGCATTCAAACAAGTGCGGTACGGGTTCGCCGCCACGAGGTAGGTATGCT
TTCCCTCCCTCCCTCTCTCCCTTCCTTCCTTTCTTTCCATACCTGTCAAT
GTGGTCGTCTTGCAAATTCTGATGACGCTTGTTCATCCCCCCCCACTCCC
TCCCGCCCAGGTGCTCCGTGCTTAAACTCAGCAGCATCATTCTCAACGAG
CTCATCGCGCATGGCTTGCCAGCTACCAGCCTCTCGGCGTGTGGGGTGTG
GAACACAGTCAAAGGGGAAGTAACCAAGGTACGTCCTTGCCCTCCCTCCC
TCCCTCCCTCCCTTCCTCCCTTCCTCCCTCCCCTCTTCTGTGTCTTGTAT
CCTTCCCTGTGCCAGATTCGTCGGATTGGCCTCTTCCCCTCCCTCCCTCC
CTCCCTCCTTCCCTCCTTTTTTCTTCCCCTTCCTCCTATCTTCTTCTTAA
ATTTTCTCTCTCGGCTTCGTATCTTCTCTTGTCACCGTCATATCCCCCTG
TACATTTATTCACTCTAGCAACCACCTTTCCATCCTCCTCCCCCCCTTCG
AATACTCCGCCCTCATCTTATTTATCCCTCTCTCCCTCCCTCTTTCCTCC
CTTCCGGCAGAGCAACACCCGCGCTGTGGTCGATTTGCTGGCCCTGGGTT
TCATCGCCGTCATGCACGGAGATGGTGTCTTAGACGCAGTAAAGGTGAGG
GAGGACGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGATTCAGGGA
GGAATGGAGGCACATCATCTTCATCTATGCAGGCCTCACATGCTCTATCC
CTCTCTCCCTCCCTCCCTCCCTCCCTCCCTAGGGCTGCAACGTCCTCAGC
GGAGACACCATCATCCGTCAGCTGGCCCAGGATGTACCGGACGTTTCCAG
GGTAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGAAGAAACGAGG
ATGCAGACGGGCTTTTTAAAAGAGCGTTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCTTCAGGTTGTCTTCCTGACAGACGTG
GATGGTGTCTATAACATGGATCCTGCCCTCCCCGGCTCTCGCCTCCTCCC
CCACATCCATGTTAACCAAAAAGGTGAAATCGAGATTCCTCCCCCCCCCC
CCTTCCTCCTCCTCCTCCTCCTCCTCCCTCCCTTCCCCATCGTCCTCCGC
GCTGTGTACGGACAGTGGAAGCAAAGGCGATGACGTTACGGGGGGAATGC
GACTCAAGCTCAGCACTGCGATCTCCATCCAGGTAGGACTTGCCCTCCCA
TCCCACCCTCCCTCCCCCTCATTGAAAGATCAGCCAAGCGCTGTCGGGAC
AACTTACATGTGATTCCTCGCCCTCCCCTTCTTGCCTCCCTCCTTCCCCC
CCCTTCCTTCAGGTGGATCATGGTGGCCGCGTGCCGGTGTTTATTTCGAA
AGTTGGCTCTGAGGCATCAGTCAGGGCATGTCTGGAGGGAGAGGTGGGAG
ACAAAGCGACGAAGCTGTGTGGGAAGTAGAGGGAGGAAGGGAAGGGAAGG
AAGGAAAGAGGGAGGGCAGCACGTGGGAGTGGCGATGTGAGAGTCTCGCG
GGATGTCACCGATACAAAACGAAGATCCCAAAGCGGAAGAGAAGGAGGGA
GGAAAGGAAAGGAAGAATGAATCAAACCAC back to topCoding sequence (CDS) from alignment at scaffold_113:33800..35479- >mRNA_12103 ID=mRNA_12103|Name=jgi.p|Nanoce1779_2|616174|organism=Nannochloropsis oceanica|type=CDS|length=1512bp|location=Sequence derived from alignment at scaffold_113:33800..35479- (Nannochloropsis oceanica)
GTGGATCATGGTGGCCGCGTGCCGGTGTTTATTTCGAAAGTTGGCTCTGA
GGCATCAGTCAGGGCATGTCTGGAGGGAGAGGTGGGAGACAAAGCGACGA
AGCTGTGTGGGAAGTAGGTGAAATCGAGATTCCTCCCCCCCCCCCCTTCC
TCCTCCTCCTCCTCCTCCTCCCTCCCTTCCCCATCGTCCTCCGCGCTGTG
TACGGACAGTGGAAGCAAAGGCGATGACGTTACGGGGGGAATGCGACTCA
AGCTCAGCACTGCGATCTCCATCCAGGGCTGCAACGTCCTCAGCGGAGAC
ACCATCATCCGTCAGCTGGCCCAGGATGTACCGGACGTTTCCAGGATGCA
CGGAGATGGTGTCTTAGACGCAGTAAAGGTGGATCATGGTGGCCGCGTGC
CGGTGTTTATTTCGAAAGTTGGCTCTGAGGCATCAGTCAGGGCATGTCTG
GAGGGAGAGGTGGGAGACAAAGCGACGAAGCTGTGTGGGAAGTAGGTGAA
ATCGAGATTCCTCCCCCCCCCCCCTTCCTCCTCCTCCTCCTCCTCCTCCC
TCCCTTCCCCATCGTCCTCCGCGCTGTGTACGGACAGTGGAAGCAAAGGC
GATGACGTTACGGGGGGAATGCGACTCAAGCTCAGCACTGCGATCTCCAT
CCAGGGCTGCAACGTCCTCAGCGGAGACACCATCATCCGTCAGCTGGCCC
AGGATGTACCGGACGTTTCCAGGATGCACGGAGATGGTGTCTTAGACGCA
GTAAAGGTGGATCATGGTGGCCGCGTGCCGGTGTTTATTTCGAAAGTTGG
CTCTGAGGCATCAGTCAGGGCATGTCTGGAGGGAGAGGTGGGAGACAAAG
CGACGAAGCTGTGTGGGAAGTAGGTGAAATCGAGATTCCTCCCCCCCCCC
CCTTCCTCCTCCTCCTCCTCCTCCTCCCTCCCTTCCCCATCGTCCTCCGC
GCTGTGTACGGACAGTGGAAGCAAAGGCGATGACGTTACGGGGGGAATGC
GACTCAAGCTCAGCACTGCGATCTCCATCCAGGGCTGCAACGTCCTCAGC
GGAGACACCATCATCCGTCAGCTGGCCCAGGATGTACCGGACGTTTCCAG
GATGCACGGAGATGGTGTCTTAGACGCAGTAAAGGTGGATCATGGTGGCC
GCGTGCCGGTGTTTATTTCGAAAGTTGGCTCTGAGGCATCAGTCAGGGCA
TGTCTGGAGGGAGAGGTGGGAGACAAAGCGACGAAGCTGTGTGGGAAGTA
GGTGAAATCGAGATTCCTCCCCCCCCCCCCTTCCTCCTCCTCCTCCTCCT
CCTCCCTCCCTTCCCCATCGTCCTCCGCGCTGTGTACGGACAGTGGAAGC
AAAGGCGATGACGTTACGGGGGGAATGCGACTCAAGCTCAGCACTGCGAT
CTCCATCCAGGGCTGCAACGTCCTCAGCGGAGACACCATCATCCGTCAGC
TGGCCCAGGATGTACCGGACGTTTCCAGGATGCACGGAGATGGTGTCTTA
GACGCAGTAAAG back to top
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