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Properties
Property Name | Value |
TranscriptId | 615688 |
Track | FilteredModels2 |
ProteinId | 615602 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_104 | supercontig | scaffold_104:20960..22978 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_11752 ID=mRNA_11752|Name=jgi.p|Nanoce1779_2|615602|organism=Nannochloropsis oceanica|type=mRNA|length=1128bp AGGTACACCATCTAGCGTGCAACCATGCCAGTGATATGGAGACAAGGAGA CAGGATCAGAAGCAGGAGCAGCTACAGCAGAAGACGTCGCCCTCGCGCTG TATCCGGTGGATTGGGCTTTTTGCTTATGGCGGTTGCGACGACCACTACG ACCACGGCCTGGCTCACGCCCACCTGCCATCCTTCCGTTGCTATTACCTT CCAGCGTCAAGCTATTTCAACCAACCTGGCAAGCAGCAGCAATGTCAGAA GGAAAGATAGCAGGACCCCTTCTCTCCTCCTGGGCATGCGCTTGTCATCC TCTGCCCTCAAGCAGCAGCAGCATGATGACGACGAGGGCGACGAGGACCG CCTCCTCTTCCTCACCCTTCCCTCCCTCCCCCTTGCCCGTACCGTGGGGG CCTACCTGGTAGAACTGGGATTGGCACGCACCGTCTCATTGTGGCCTTCG ACAGTAGAAACATGGATGGCGACAGACGATGGCAAGATGTCGACAGGCCG TGGCGGGGCCAGGGAGGAGTTCGGTTTGGTGGTGGCTGCCAGGGCTGGCC CGGCGGCACGGCTGATCCAAAAGGAGGTCCGCCGCCTCCTCCTCGAGGCT AACTCGGAGGATGTCGAGGAGCAGCAACAAGGACAGAGGGCTCCGTCCAT CCCATCTTCTTCCGACGACAATAAATGGGCCGTCAGTAGGATAAGTGGAG TCCAAGACTCTCAAGACGAGCCCCCCCCCCCTTCGCCTTCCCGCATGAGC GAATACTCGGGCTTGTGGGAATGGGAAGAAGCCAATGCGTTCGATGACGA GTACTTCGAGGACGACGAGGACGACCCCGTGCTGGTGCCTCACGAGGACA TCATGATCGTCAATGAGGAGGACGCGTATGAGTCCGTCGTGGGAGGAGGG AAGAAGGAAAGGGGAAAGGACGACACGGGAGAGGTAGAGGGAGAACAGAA GGAGGATAAGAAGGTGTTGGAGGATGTGGTGGCGAAGAAGGAGGGGAAGG AAGCAGCGGAGGAGGAGGAGGAGGAGGAGTGGTGTGACGACGATGAGGTT CATAATGGGCTGTTAGGCTGGTGAGCTTGACTCTGATATAGTTTTTTTCC CCAGAGAATATACGAGGATGGAAAGCGA back to topprotein sequence of jgi.p|Nanoce1779_2|615602 >mRNA_11752-protein ID=mRNA_11752-protein|Name=jgi.p|Nanoce1779_2|615602|organism=Nannochloropsis oceanica|type=polypeptide|length=350bp MPVIWRQGDRIRSRSSYSRRRRPRAVSGGLGFLLMAVATTTTTTAWLTPT CHPSVAITFQRQAISTNLASSSNVRRKDSRTPSLLLGMRLSSSALKQQQH DDDEGDEDRLLFLTLPSLPLARTVGAYLVELGLARTVSLWPSTVETWMAT DDGKMSTGRGGAREEFGLVVAARAGPAARLIQKEVRRLLLEANSEDVEEQ QQGQRAPSIPSSSDDNKWAVSRISGVQDSQDEPPPPSPSRMSEYSGLWEW EEANAFDDEYFEDDEDDPVLVPHEDIMIVNEEDAYESVVGGGKKERGKDD TGEVEGEQKEDKKVLEDVVAKKEGKEAAEEEEEEEWCDDDEVHNGLLGW* back to topmRNA from alignment at scaffold_104:20960..22978- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_11752 ID=mRNA_11752|Name=jgi.p|Nanoce1779_2|615602|organism=Nannochloropsis oceanica|type=mRNA|length=2019bp|location=Sequence derived from alignment at scaffold_104:20960..22978- (Nannochloropsis oceanica) AGGTACACCATCTAGCGTGCAACCATGCCAGTGATATGGAGACAAGGAGA
CAGGATCAGAAGCAGGAGCAGCTACAGCAGAAGACGTCGCCCTCGCGCTG
TATCCGGTGGATTGGGCTTTTTGCTTATGGCGGTTGCGACGACCACTACG
ACCACGGTACGTACCCCAACGCTGCTGATGCTACGAACTCTCTCGACCTT
TCTCTGTGAATGCTCACTGTGAAGTTTTCGCTCCTCTTTCCAGGCCTGGC
TCACGCCCACCTGCCATCCTTCCGTTGCTATTACCTTCCAGCGTCAAGCT
ATTTCAACCAACCTGGCAAGCAGCAGCAATGTCAGAAGGAAAGATAGCAG
GACCCCTTCTCTCCTCCTGGGCATGCGCTTGTCATCCTCTGCCCTCAAGC
AGCAGCAGCATGATGACGACGAGGGCGACGAGGACCGCCTCCTCTTCCTC
ACCCTTCCCTCCCTCCCCCTTGCCCGTACCGTGGGGGCCTACCTGGTAGA
ACTGGGATTGGCACGCACCGTCTCATTGTGGCCTTCGACAGTAGAAACAT
GGATGGCGACAGACGATGGCAAGATGTAGGTGTCCGGGGAGGCAGAGAGG
AAGGGAGGAGGGGAGAAGAGGGGTAGTGCTTGGCAAGGAAAAAGGGAGCG
CTAACACGCAGGACATGCATGTGCTTGTGAGTGCATTCTCATCCTCTCTC
ACATATACATACTCTTTCACTTTGCATATTCCAAGGTCGACAGGCCGTGG
CGGGGCCAGGGAGGAGTTCGGTTTGGTGGTGGCTGCCAGGGCTGGCCCGG
CGGCACGGCTGGTGGGAAGGGAGGGAGTGAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAGGGAAAATAAGGGGCGGTGATATAAAGAGCGACGGCACATTA
AAGAAGTACCAGAAGAGCATCTAATCTTCCCATCTCTCCTCATCCCCTCC
TCTGTCCTTTTCCCTACAGATCCAAAAGGAGGTCCGCCGCCTCCTCCTCG
AGGCTAACTCGGAGGATGTCGAGGAGCAGCAACAAGGACAGAGGGCTCCG
TCCATCCCATCTTCTTCCGACGACAATAAATGGGCCGTCAGTAGGATAAG
TGGAGTCCAAGACTCTCAAGGTGTGTCTCCTTTCTCATCCCCTCCACTCC
TTCCTTCCTCCGTCCCTCCCTCCTCTCCTCCCTTTTCCCTCCCTCCCTCC
GTCCCTCCCTCCTCTCCTCCCTGTCCAAGTGAGCATCTCCTTTCTCTCAC
TCGTTGTTCATTTATTTCCTCTTCTATTCTTATGCGAAAGCCTTTCTAAT
CATGTAATAGAGCACAGGGCACCGAGTCTTGGGAGTTGAAGACATTACTT
TCGTCCCCGTCAAACGACCCATCCGCCATCCCTCCCTTCCTTCCTTCCTT
ACTTCCTTCCCCCTTTCAGACGAGCCCCCCCCCCCTTCGCCTTCCCGCAT
GAGCGAATACTCGGGCTTGTGGGAATGGGAAGAAGCCAATGCGTTCGATG
ACGAGTACTTCGAGGACGACGAGGACGGTGAGGAGGGAAGGAGGGAAGAG
GAGAGAGAGGGAGGGAGGGACGGAGGGAGGGATGGTTTGTGCACTCTTGT
ACTTTACCCTCCAGCTTTCGGTCTGACCAGTATCTCAACACTCACGCGAT
ATATGCTACTTATCCACCACTCCCTCCTTCCTTCTTTCCTCCCTCCCTCC
CTCCCTCCCTCCAGACCCCGTGCTGGTGCCTCACGAGGACATCATGATCG
TCAATGAGGAGGACGCGTATGAGTCCGTCGTGGGAGGAGGGAAGAAGGAA
AGGGGAAAGGACGACACGGGAGAGGTAGAGGGAGAACAGAAGGAGGATAA
GAAGGTGTTGGAGGATGTGGTGGCGAAGAAGGAGGGGAAGGAAGCAGCGG
AGGAGGAGGAGGAGGAGGAGTGGTGTGACGACGATGAGGTTCATAATGGG
CTGTTAGGCTGGTGAGCTTGACTCTGATATAGTTTTTTTCCCCAGAGAAT
ATACGAGGATGGAAAGCGA back to topCoding sequence (CDS) from alignment at scaffold_104:20960..22978- >mRNA_11752 ID=mRNA_11752|Name=jgi.p|Nanoce1779_2|615602|organism=Nannochloropsis oceanica|type=CDS|length=6300bp|location=Sequence derived from alignment at scaffold_104:20960..22978- (Nannochloropsis oceanica) ACCCCGTGCTGGTGCCTCACGAGGACATCATGATCGTCAATGAGGAGGAC GCGTATGAGTCCGTCGTGGGAGGAGGGAAGAAGGAAAGGGGAAAGGACGA CACGGGAGAGGTAGAGGGAGAACAGAAGGAGGATAAGAAGGTGTTGGAGG ATGTGGTGGCGAAGAAGGAGGGGAAGGAAGCAGCGGAGGAGGAGGAGGAG GAGGAGTGGTGTGACGACGATGAGGTTCATAATGGGCTGTTAGGCTGGTG AACGAGCCCCCCCCCCCTTCGCCTTCCCGCATGAGCGAATACTCGGGCTT GTGGGAATGGGAAGAAGCCAATGCGTTCGATGACGAGTACTTCGAGGACG ACGAGGACGATCCAAAAGGAGGTCCGCCGCCTCCTCCTCGAGGCTAACTC GGAGGATGTCGAGGAGCAGCAACAAGGACAGAGGGCTCCGTCCATCCCAT CTTCTTCCGACGACAATAAATGGGCCGTCAGTAGGATAAGTGGAGTCCAA GACTCTCAAGGTCGACAGGCCGTGGCGGGGCCAGGGAGGAGTTCGGTTTG GTGGTGGCTGCCAGGGCTGGCCCGGCGGCACGGCTGGCCTGGCTCACGCC CACCTGCCATCCTTCCGTTGCTATTACCTTCCAGCGTCAAGCTATTTCAA CCAACCTGGCAAGCAGCAGCAATGTCAGAAGGAAAGATAGCAGGACCCCT TCTCTCCTCCTGGGCATGCGCTTGTCATCCTCTGCCCTCAAGCAGCAGCA GCATGATGACGACGAGGGCGACGAGGACCGCCTCCTCTTCCTCACCCTTC CCTCCCTCCCCCTTGCCCGTACCGTGGGGGCCTACCTGGTAGAACTGGGA TTGGCACGCACCGTCTCATTGTGGCCTTCGACAGTAGAAACATGGATGGC GACAGACGATGGCAAGATATGCCAGTGATATGGAGACAAGGAGACAGGAT CAGAAGCAGGAGCAGCTACAGCAGAAGACGTCGCCCTCGCGCTGTATCCG GTGGATTGGGCTTTTTGCTTATGGCGGTTGCGACGACCACTACGACCACG ACCCCGTGCTGGTGCCTCACGAGGACATCATGATCGTCAATGAGGAGGAC GCGTATGAGTCCGTCGTGGGAGGAGGGAAGAAGGAAAGGGGAAAGGACGA CACGGGAGAGGTAGAGGGAGAACAGAAGGAGGATAAGAAGGTGTTGGAGG ATGTGGTGGCGAAGAAGGAGGGGAAGGAAGCAGCGGAGGAGGAGGAGGAG GAGGAGTGGTGTGACGACGATGAGGTTCATAATGGGCTGTTAGGCTGGTG AACGAGCCCCCCCCCCCTTCGCCTTCCCGCATGAGCGAATACTCGGGCTT GTGGGAATGGGAAGAAGCCAATGCGTTCGATGACGAGTACTTCGAGGACG ACGAGGACGATCCAAAAGGAGGTCCGCCGCCTCCTCCTCGAGGCTAACTC GGAGGATGTCGAGGAGCAGCAACAAGGACAGAGGGCTCCGTCCATCCCAT CTTCTTCCGACGACAATAAATGGGCCGTCAGTAGGATAAGTGGAGTCCAA GACTCTCAAGGTCGACAGGCCGTGGCGGGGCCAGGGAGGAGTTCGGTTTG GTGGTGGCTGCCAGGGCTGGCCCGGCGGCACGGCTGGCCTGGCTCACGCC CACCTGCCATCCTTCCGTTGCTATTACCTTCCAGCGTCAAGCTATTTCAA CCAACCTGGCAAGCAGCAGCAATGTCAGAAGGAAAGATAGCAGGACCCCT TCTCTCCTCCTGGGCATGCGCTTGTCATCCTCTGCCCTCAAGCAGCAGCA GCATGATGACGACGAGGGCGACGAGGACCGCCTCCTCTTCCTCACCCTTC CCTCCCTCCCCCTTGCCCGTACCGTGGGGGCCTACCTGGTAGAACTGGGA TTGGCACGCACCGTCTCATTGTGGCCTTCGACAGTAGAAACATGGATGGC GACAGACGATGGCAAGATATGCCAGTGATATGGAGACAAGGAGACAGGAT CAGAAGCAGGAGCAGCTACAGCAGAAGACGTCGCCCTCGCGCTGTATCCG GTGGATTGGGCTTTTTGCTTATGGCGGTTGCGACGACCACTACGACCACG ACCCCGTGCTGGTGCCTCACGAGGACATCATGATCGTCAATGAGGAGGAC GCGTATGAGTCCGTCGTGGGAGGAGGGAAGAAGGAAAGGGGAAAGGACGA CACGGGAGAGGTAGAGGGAGAACAGAAGGAGGATAAGAAGGTGTTGGAGG ATGTGGTGGCGAAGAAGGAGGGGAAGGAAGCAGCGGAGGAGGAGGAGGAG GAGGAGTGGTGTGACGACGATGAGGTTCATAATGGGCTGTTAGGCTGGTG AACGAGCCCCCCCCCCCTTCGCCTTCCCGCATGAGCGAATACTCGGGCTT GTGGGAATGGGAAGAAGCCAATGCGTTCGATGACGAGTACTTCGAGGACG ACGAGGACGATCCAAAAGGAGGTCCGCCGCCTCCTCCTCGAGGCTAACTC GGAGGATGTCGAGGAGCAGCAACAAGGACAGAGGGCTCCGTCCATCCCAT CTTCTTCCGACGACAATAAATGGGCCGTCAGTAGGATAAGTGGAGTCCAA GACTCTCAAGGTCGACAGGCCGTGGCGGGGCCAGGGAGGAGTTCGGTTTG GTGGTGGCTGCCAGGGCTGGCCCGGCGGCACGGCTGGCCTGGCTCACGCC CACCTGCCATCCTTCCGTTGCTATTACCTTCCAGCGTCAAGCTATTTCAA CCAACCTGGCAAGCAGCAGCAATGTCAGAAGGAAAGATAGCAGGACCCCT TCTCTCCTCCTGGGCATGCGCTTGTCATCCTCTGCCCTCAAGCAGCAGCA GCATGATGACGACGAGGGCGACGAGGACCGCCTCCTCTTCCTCACCCTTC CCTCCCTCCCCCTTGCCCGTACCGTGGGGGCCTACCTGGTAGAACTGGGA TTGGCACGCACCGTCTCATTGTGGCCTTCGACAGTAGAAACATGGATGGC GACAGACGATGGCAAGATATGCCAGTGATATGGAGACAAGGAGACAGGAT CAGAAGCAGGAGCAGCTACAGCAGAAGACGTCGCCCTCGCGCTGTATCCG GTGGATTGGGCTTTTTGCTTATGGCGGTTGCGACGACCACTACGACCACG ACCCCGTGCTGGTGCCTCACGAGGACATCATGATCGTCAATGAGGAGGAC GCGTATGAGTCCGTCGTGGGAGGAGGGAAGAAGGAAAGGGGAAAGGACGA CACGGGAGAGGTAGAGGGAGAACAGAAGGAGGATAAGAAGGTGTTGGAGG ATGTGGTGGCGAAGAAGGAGGGGAAGGAAGCAGCGGAGGAGGAGGAGGAG GAGGAGTGGTGTGACGACGATGAGGTTCATAATGGGCTGTTAGGCTGGTG AACGAGCCCCCCCCCCCTTCGCCTTCCCGCATGAGCGAATACTCGGGCTT GTGGGAATGGGAAGAAGCCAATGCGTTCGATGACGAGTACTTCGAGGACG ACGAGGACGATCCAAAAGGAGGTCCGCCGCCTCCTCCTCGAGGCTAACTC GGAGGATGTCGAGGAGCAGCAACAAGGACAGAGGGCTCCGTCCATCCCAT CTTCTTCCGACGACAATAAATGGGCCGTCAGTAGGATAAGTGGAGTCCAA GACTCTCAAGGTCGACAGGCCGTGGCGGGGCCAGGGAGGAGTTCGGTTTG GTGGTGGCTGCCAGGGCTGGCCCGGCGGCACGGCTGGCCTGGCTCACGCC CACCTGCCATCCTTCCGTTGCTATTACCTTCCAGCGTCAAGCTATTTCAA CCAACCTGGCAAGCAGCAGCAATGTCAGAAGGAAAGATAGCAGGACCCCT TCTCTCCTCCTGGGCATGCGCTTGTCATCCTCTGCCCTCAAGCAGCAGCA GCATGATGACGACGAGGGCGACGAGGACCGCCTCCTCTTCCTCACCCTTC CCTCCCTCCCCCTTGCCCGTACCGTGGGGGCCTACCTGGTAGAACTGGGA TTGGCACGCACCGTCTCATTGTGGCCTTCGACAGTAGAAACATGGATGGC GACAGACGATGGCAAGATATGCCAGTGATATGGAGACAAGGAGACAGGAT CAGAAGCAGGAGCAGCTACAGCAGAAGACGTCGCCCTCGCGCTGTATCCG GTGGATTGGGCTTTTTGCTTATGGCGGTTGCGACGACCACTACGACCACG ACCCCGTGCTGGTGCCTCACGAGGACATCATGATCGTCAATGAGGAGGAC GCGTATGAGTCCGTCGTGGGAGGAGGGAAGAAGGAAAGGGGAAAGGACGA CACGGGAGAGGTAGAGGGAGAACAGAAGGAGGATAAGAAGGTGTTGGAGG ATGTGGTGGCGAAGAAGGAGGGGAAGGAAGCAGCGGAGGAGGAGGAGGAG GAGGAGTGGTGTGACGACGATGAGGTTCATAATGGGCTGTTAGGCTGGTG AACGAGCCCCCCCCCCCTTCGCCTTCCCGCATGAGCGAATACTCGGGCTT GTGGGAATGGGAAGAAGCCAATGCGTTCGATGACGAGTACTTCGAGGACG ACGAGGACGATCCAAAAGGAGGTCCGCCGCCTCCTCCTCGAGGCTAACTC GGAGGATGTCGAGGAGCAGCAACAAGGACAGAGGGCTCCGTCCATCCCAT CTTCTTCCGACGACAATAAATGGGCCGTCAGTAGGATAAGTGGAGTCCAA GACTCTCAAGGTCGACAGGCCGTGGCGGGGCCAGGGAGGAGTTCGGTTTG GTGGTGGCTGCCAGGGCTGGCCCGGCGGCACGGCTGGCCTGGCTCACGCC CACCTGCCATCCTTCCGTTGCTATTACCTTCCAGCGTCAAGCTATTTCAA CCAACCTGGCAAGCAGCAGCAATGTCAGAAGGAAAGATAGCAGGACCCCT TCTCTCCTCCTGGGCATGCGCTTGTCATCCTCTGCCCTCAAGCAGCAGCA GCATGATGACGACGAGGGCGACGAGGACCGCCTCCTCTTCCTCACCCTTC CCTCCCTCCCCCTTGCCCGTACCGTGGGGGCCTACCTGGTAGAACTGGGA TTGGCACGCACCGTCTCATTGTGGCCTTCGACAGTAGAAACATGGATGGC GACAGACGATGGCAAGATATGCCAGTGATATGGAGACAAGGAGACAGGAT CAGAAGCAGGAGCAGCTACAGCAGAAGACGTCGCCCTCGCGCTGTATCCG GTGGATTGGGCTTTTTGCTTATGGCGGTTGCGACGACCACTACGACCACG ACCCCGTGCTGGTGCCTCACGAGGACATCATGATCGTCAATGAGGAGGAC GCGTATGAGTCCGTCGTGGGAGGAGGGAAGAAGGAAAGGGGAAAGGACGA CACGGGAGAGGTAGAGGGAGAACAGAAGGAGGATAAGAAGGTGTTGGAGG ATGTGGTGGCGAAGAAGGAGGGGAAGGAAGCAGCGGAGGAGGAGGAGGAG GAGGAGTGGTGTGACGACGATGAGGTTCATAATGGGCTGTTAGGCTGGTG AACGAGCCCCCCCCCCCTTCGCCTTCCCGCATGAGCGAATACTCGGGCTT GTGGGAATGGGAAGAAGCCAATGCGTTCGATGACGAGTACTTCGAGGACG ACGAGGACGATCCAAAAGGAGGTCCGCCGCCTCCTCCTCGAGGCTAACTC GGAGGATGTCGAGGAGCAGCAACAAGGACAGAGGGCTCCGTCCATCCCAT CTTCTTCCGACGACAATAAATGGGCCGTCAGTAGGATAAGTGGAGTCCAA GACTCTCAAGGTCGACAGGCCGTGGCGGGGCCAGGGAGGAGTTCGGTTTG GTGGTGGCTGCCAGGGCTGGCCCGGCGGCACGGCTGGCCTGGCTCACGCC CACCTGCCATCCTTCCGTTGCTATTACCTTCCAGCGTCAAGCTATTTCAA CCAACCTGGCAAGCAGCAGCAATGTCAGAAGGAAAGATAGCAGGACCCCT TCTCTCCTCCTGGGCATGCGCTTGTCATCCTCTGCCCTCAAGCAGCAGCA GCATGATGACGACGAGGGCGACGAGGACCGCCTCCTCTTCCTCACCCTTC CCTCCCTCCCCCTTGCCCGTACCGTGGGGGCCTACCTGGTAGAACTGGGA TTGGCACGCACCGTCTCATTGTGGCCTTCGACAGTAGAAACATGGATGGC GACAGACGATGGCAAGATATGCCAGTGATATGGAGACAAGGAGACAGGAT CAGAAGCAGGAGCAGCTACAGCAGAAGACGTCGCCCTCGCGCTGTATCCG GTGGATTGGGCTTTTTGCTTATGGCGGTTGCGACGACCACTACGACCACG back to top
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