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Properties
| Property Name | Value |
|---|
| TranscriptId | 615679 |
| Track | FilteredModels2 |
| ProteinId | 615593 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_104 | supercontig | scaffold_104:10473..12770 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_11750 ID=mRNA_11750|Name=jgi.p|Nanoce1779_2|615593|organism=Nannochloropsis oceanica|type=mRNA|length=1163bp
CGCCCTCGTTCTTTACCACCGCGGCATCCTTCTCTTCCTCGTCCTCGTCG
TCACCGAATGGAAGAGGAGGGGGAGGAGGAGGGGAAGGCGAAGGCGCGAC
GGAGGACATGAAAGGGTATGACGCTCACCCCTCCATGTTCGCCCCATCGG
GCCGCATCCCGCAGGTGGAGTATGCACGCGAGGCTGTTAACCACGGCCAG
CCCCTCGTGGGCATCAAGGCCAAGGACGGCGTTGTCCTCGTGGGTCGAAA
AATGCTCGAGTCCAAGAAACTACAAGATGGCCGCCTGCGTCAGAAACTCT
ACCGCGTGGACCGGCACGTGTTGGTGGGCGTAACGGGCATGACAGCTGAC
GCCTTGGCATTGGTACGCCTGGCCCGGGCGTATGCCCAGGAATACCGTCG
GACTTACAGCGAGCCCGTCCCTGTGCGTCATCTTGCCGAACACATTTGTG
ATGTAAAGCATACCTGCACGATGATTCCCCATCGTCCGTTCGGCGTCTCC
CTCCTCGTGGCCGGCTGGGACTCGACGCACGGCTACCAGCTTTACAAGAC
TGACCCGTCCGCAAGTTACGAGGCCTGGCGAGCCGTTGCAGTGGGAGAGA
AACACGACGTGCTCACCCAACGGCTTGCCTCGTCCCCCCTCCTCAATTCC
TCTGGCTCATCCCCTTCCCCTCCCTCCCTTGAAAACGCCTGCGCTCTTGC
CTGTGCTACGGCCCTGGTGGAAGGAGGGAGGGAGGGATCGCCGCTTGGTG
TCGACGGGAAGGGTGGAAGGGTGGGAGAGTGCGATGAAGGGATCAAGGAA
GGGTCTGTAGAGGCATGTGAGGGTGAGCTGGAGATGGCGGTGGTAAAGGG
AGGGGAGGTTTACTTTTTAGAGCAAACGGACGTGAAGGCGGCGTTGAGGG
CGAGGCCCAGATAGGGTCAGGTGGTGGACGAGGTCGAAAAGATCGGGGAG
AAGAACAAGAAGGAAGGAGACGAGAAATGGTGGGCAGTATGTAGCTGCTG
TCACGAATGTAGCGATGCATTGAACATAAATTGAACAATACTAGAGGCTA
ACTAATCCTTAGCCCATGTCGATCCCCTAAAAACAGAATCAACTCAATCA
AACTTAACTCAATTCGACTCGAAATAGGGGGAAAAAGAATCAATTCAAGT
CATTAAATTCCAA back to topprotein sequence of jgi.p|Nanoce1779_2|615593 >mRNA_11750-protein ID=mRNA_11750-protein|Name=jgi.p|Nanoce1779_2|615593|organism=Nannochloropsis oceanica|type=polypeptide|length=269bp
MKGYDAHPSMFAPSGRIPQVEYAREAVNHGQPLVGIKAKDGVVLVGRKML
ESKKLQDGRLRQKLYRVDRHVLVGVTGMTADALALVRLARAYAQEYRRTY
SEPVPVRHLAEHICDVKHTCTMIPHRPFGVSLLVAGWDSTHGYQLYKTDP
SASYEAWRAVAVGEKHDVLTQRLASSPLLNSSGSSPSPPSLENACALACA
TALVEGGREGSPLGVDGKGGRVGECDEGIKEGSVEACEGELEMAVVKGGE
VYFLEQTDVKAALRARPR* back to topmRNA from alignment at scaffold_104:10473..12770- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_11750 ID=mRNA_11750|Name=jgi.p|Nanoce1779_2|615593|organism=Nannochloropsis oceanica|type=mRNA|length=2298bp|location=Sequence derived from alignment at scaffold_104:10473..12770- (Nannochloropsis oceanica)
CGCCCTCGTTCTTTACCACCGCGGCATCCTTCTCTTCCTCGTCCTCGTCG
TCACCGAATGGAAGAGGAGGGGGAGGAGGAGGGGAAGGCGAAGGCGCGAC
GGAGGACATGAAAGGGTATGACGCTCACCCCTCCATGTTCGCCCCATCGG
GCCGCATCCCGCAGGTGGAGTATGCACGCGAGGTGAGGAGGAAGGAAGGG
ACAGGAAGAGGGGAGGGAGGAGAGGGGGGGAGGAAGGGGAGGGATTATGG
AAAGGAAAATGAGGAGGGAGGGGAAGACTCGTCAAGCGAAGCAAGGCTAC
TGGAAATGGGGGAAGTGCACGTCAAGCGGTAAAGACAGCGAAACATTTAC
TCATTCCCTCCCTCCTTTCCTCTTTCCCTCCCTCCCTCCCTCCCTCTCAT
CTTTCTTCCTTTCCCGCAGGCTGTTAACCACGGCCAGCCCCTCGTGGGCA
TCAAGGCCAAGGACGGCGTTGTCCTCGTGGGTCGAAAAATGCTCGAGTCC
AAGAAACTACAAGTACGTCCCCCCTCCCTCCCTCATCTCCTCCTTCCCTC
CTTCCCTTCCTCTCTCCCTTCCTTTTTCCTTCACTCCCTTCCTTTCTGTC
TTGTCCTCCCTTGGGATGAGGGTCACATCATCTCCTTGCTTCCCTCGCTT
CCACCCCCTGGTAGGATGGCCGCCTGCGTCAGAAACTCTACCGCGTGGAC
CGGCACGTGTTGGTGGGCGTAACGGGCATGACAGCTGACGCCTTGGCATT
GGTGAGGAGGGAGGGAGAGAGGGAGGGAGGGAGGAAAGTAGGCATGAGTG
TGTAAATGATGAGGACGCAGATAGCTTAGTGGTCTAGCGGGCGGGGCCTC
GAGCCTCTGCCCTCCGTGAGACGACACAAAATCCAATTGATCCTACTGAC
AAACACTCACACACATTAATACTTATCAACACACATATATATTGTGTGTA
TGTATGCATATATACATATATACATATATCTCTCAAGATGACGATGATGC
GCCGAAGTCAATCTGTTCGTCTGTCTCCTTCTCACCCCTTCCTTCCCCCC
TCCGTCCCTCCCTCCCTCAGGTACGCCTGGCCCGGGCGTATGCCCAGGAA
TACCGTCGGACTTACAGCGAGCCCGTCCCTGTGCGTCATCTTGCCGAACA
CATTTGTGATGTAAAGCATACCTGCACGATGGTACGTCTCCCTCCCTCCC
TCCCTCCCTCCCTTCTTTCCTGTCTTCTCCCTCCCTCCCGTTTACCACCA
CGCCGAATGTTCGTCTTATGTTGAGGATGAATGTGTGAAGACAGGCACGT
CTCCCTGCCCTCCCTCTTCCCCCCTTTCCCTCTCTCCCGCCCTCCCCCCC
TTTCCCCATCCATCACCATCCGTCCACCCCTCCCTCCCTTCCTTCTTCAT
TTCCTAGATTCCCCATCGTCCGTTCGGCGTCTCCCTCCTCGTGGCCGGCT
GGGACTCGACGCACGGCTACCAGCTTTACAAGACTGACCCGTCCGGTAGG
TAGGGAGGGAGGGCGGTAGGGAGGGAGGGTGGGTGGGCAGGAACAAGAGC
ATGGATACTAGGCGGGCCGTTGGGAAGGGAGGGAGAAACGGTTCATGGAG
ATTCAATTTTCGATGGGTGATGTCTCGGCGAATTTAAAGGGGTTCTTTAT
CTCACCATCCCTCCCTCCCTCCCTCCCCATTTCACGACCGTTACAGCAAG
TTACGAGGCCTGGCGAGCCGTTGCAGTGGGAGAGAAACACGACGTGCTCA
CCCAACGGCTTGCCTCGTCCCCCCTCCTCAATTCCTCTGGCTCATCCCCT
TCCCCTCCCTCCCTTGAAAACGCCTGCGCTCTTGCCTGTGCTACGGCCCT
GGTGGAAGGAGGGAGGGAGGGATCGCCGCTTGGTGTCGACGGGAAGGGTG
GAAGGGTGGGAGAGTGCGATGAAGGGATCAAGGAAGGGTCTGTAGAGGCA
TGTGAGGGTGAGCTGGAGATGGCGGTGGTAAAGGGAGGGGAGGTTTACTT
TTTAGAGCAAACGGACGTGAAGGCGGCGTTGAGGGCGAGGCCCAGATAGG
GTCAGGTGGTGGACGAGGTCGAAAAGATCGGGGAGAAGAACAAGAAGGAA
GGAGACGAGAAATGGTGGGCAGTATGTAGCTGCTGTCACGAATGTAGCGA
TGCATTGAACATAAATTGAACAATACTAGAGGCTAACTAATCCTTAGCCC
ATGTCGATCCCCTAAAAACAGAATCAACTCAATCAAACTTAACTCAATTC
GACTCGAAATAGGGGGAAAAAGAATCAATTCAAGTCATTAAATTCCAA back to topCoding sequence (CDS) from alignment at scaffold_104:10473..12770- >mRNA_11750 ID=mRNA_11750|Name=jgi.p|Nanoce1779_2|615593|organism=Nannochloropsis oceanica|type=CDS|length=4842bp|location=Sequence derived from alignment at scaffold_104:10473..12770- (Nannochloropsis oceanica)
CAAGTTACGAGGCCTGGCGAGCCGTTGCAGTGGGAGAGAAACACGACGTG
CTCACCCAACGGCTTGCCTCGTCCCCCCTCCTCAATTCCTCTGGCTCATC
CCCTTCCCCTCCCTCCCTTGAAAACGCCTGCGCTCTTGCCTGTGCTACGG
CCCTGGTGGAAGGAGGGAGGGAGGGATCGCCGCTTGGTGTCGACGGGAAG
GGTGGAAGGGTGGGAGAGTGCGATGAAGGGATCAAGGAAGGGTCTGTAGA
GGCATGTGAGGGTGAGCTGGAGATGGCGGTGGTAAAGGGAGGGGAGGTTT
ACTTTTTAGAGCAAACGGACGTGAAGGCGGCGTTGAGGGCGAGGCCCAGA
TAGATTCCCCATCGTCCGTTCGGCGTCTCCCTCCTCGTGGCCGGCTGGGA
CTCGACGCACGGCTACCAGCTTTACAAGACTGACCCGTCCGGTACGCCTG
GCCCGGGCGTATGCCCAGGAATACCGTCGGACTTACAGCGAGCCCGTCCC
TGTGCGTCATCTTGCCGAACACATTTGTGATGTAAAGCATACCTGCACGA
TGGATGGCCGCCTGCGTCAGAAACTCTACCGCGTGGACCGGCACGTGTTG
GTGGGCGTAACGGGCATGACAGCTGACGCCTTGGCATTGGCTGTTAACCA
CGGCCAGCCCCTCGTGGGCATCAAGGCCAAGGACGGCGTTGTCCTCGTGG
GTCGAAAAATGCTCGAGTCCAAGAAACTACAAATGAAAGGGTATGACGCT
CACCCCTCCATGTTCGCCCCATCGGGCCGCATCCCGCAGGTGGAGTATGC
ACGCGAGCAAGTTACGAGGCCTGGCGAGCCGTTGCAGTGGGAGAGAAACA
CGACGTGCTCACCCAACGGCTTGCCTCGTCCCCCCTCCTCAATTCCTCTG
GCTCATCCCCTTCCCCTCCCTCCCTTGAAAACGCCTGCGCTCTTGCCTGT
GCTACGGCCCTGGTGGAAGGAGGGAGGGAGGGATCGCCGCTTGGTGTCGA
CGGGAAGGGTGGAAGGGTGGGAGAGTGCGATGAAGGGATCAAGGAAGGGT
CTGTAGAGGCATGTGAGGGTGAGCTGGAGATGGCGGTGGTAAAGGGAGGG
GAGGTTTACTTTTTAGAGCAAACGGACGTGAAGGCGGCGTTGAGGGCGAG
GCCCAGATAGATTCCCCATCGTCCGTTCGGCGTCTCCCTCCTCGTGGCCG
GCTGGGACTCGACGCACGGCTACCAGCTTTACAAGACTGACCCGTCCGGT
ACGCCTGGCCCGGGCGTATGCCCAGGAATACCGTCGGACTTACAGCGAGC
CCGTCCCTGTGCGTCATCTTGCCGAACACATTTGTGATGTAAAGCATACC
TGCACGATGGATGGCCGCCTGCGTCAGAAACTCTACCGCGTGGACCGGCA
CGTGTTGGTGGGCGTAACGGGCATGACAGCTGACGCCTTGGCATTGGCTG
TTAACCACGGCCAGCCCCTCGTGGGCATCAAGGCCAAGGACGGCGTTGTC
CTCGTGGGTCGAAAAATGCTCGAGTCCAAGAAACTACAAATGAAAGGGTA
TGACGCTCACCCCTCCATGTTCGCCCCATCGGGCCGCATCCCGCAGGTGG
AGTATGCACGCGAGCAAGTTACGAGGCCTGGCGAGCCGTTGCAGTGGGAG
AGAAACACGACGTGCTCACCCAACGGCTTGCCTCGTCCCCCCTCCTCAAT
TCCTCTGGCTCATCCCCTTCCCCTCCCTCCCTTGAAAACGCCTGCGCTCT
TGCCTGTGCTACGGCCCTGGTGGAAGGAGGGAGGGAGGGATCGCCGCTTG
GTGTCGACGGGAAGGGTGGAAGGGTGGGAGAGTGCGATGAAGGGATCAAG
GAAGGGTCTGTAGAGGCATGTGAGGGTGAGCTGGAGATGGCGGTGGTAAA
GGGAGGGGAGGTTTACTTTTTAGAGCAAACGGACGTGAAGGCGGCGTTGA
GGGCGAGGCCCAGATAGATTCCCCATCGTCCGTTCGGCGTCTCCCTCCTC
GTGGCCGGCTGGGACTCGACGCACGGCTACCAGCTTTACAAGACTGACCC
GTCCGGTACGCCTGGCCCGGGCGTATGCCCAGGAATACCGTCGGACTTAC
AGCGAGCCCGTCCCTGTGCGTCATCTTGCCGAACACATTTGTGATGTAAA
GCATACCTGCACGATGGATGGCCGCCTGCGTCAGAAACTCTACCGCGTGG
ACCGGCACGTGTTGGTGGGCGTAACGGGCATGACAGCTGACGCCTTGGCA
TTGGCTGTTAACCACGGCCAGCCCCTCGTGGGCATCAAGGCCAAGGACGG
CGTTGTCCTCGTGGGTCGAAAAATGCTCGAGTCCAAGAAACTACAAATGA
AAGGGTATGACGCTCACCCCTCCATGTTCGCCCCATCGGGCCGCATCCCG
CAGGTGGAGTATGCACGCGAGCAAGTTACGAGGCCTGGCGAGCCGTTGCA
GTGGGAGAGAAACACGACGTGCTCACCCAACGGCTTGCCTCGTCCCCCCT
CCTCAATTCCTCTGGCTCATCCCCTTCCCCTCCCTCCCTTGAAAACGCCT
GCGCTCTTGCCTGTGCTACGGCCCTGGTGGAAGGAGGGAGGGAGGGATCG
CCGCTTGGTGTCGACGGGAAGGGTGGAAGGGTGGGAGAGTGCGATGAAGG
GATCAAGGAAGGGTCTGTAGAGGCATGTGAGGGTGAGCTGGAGATGGCGG
TGGTAAAGGGAGGGGAGGTTTACTTTTTAGAGCAAACGGACGTGAAGGCG
GCGTTGAGGGCGAGGCCCAGATAGATTCCCCATCGTCCGTTCGGCGTCTC
CCTCCTCGTGGCCGGCTGGGACTCGACGCACGGCTACCAGCTTTACAAGA
CTGACCCGTCCGGTACGCCTGGCCCGGGCGTATGCCCAGGAATACCGTCG
GACTTACAGCGAGCCCGTCCCTGTGCGTCATCTTGCCGAACACATTTGTG
ATGTAAAGCATACCTGCACGATGGATGGCCGCCTGCGTCAGAAACTCTAC
CGCGTGGACCGGCACGTGTTGGTGGGCGTAACGGGCATGACAGCTGACGC
CTTGGCATTGGCTGTTAACCACGGCCAGCCCCTCGTGGGCATCAAGGCCA
AGGACGGCGTTGTCCTCGTGGGTCGAAAAATGCTCGAGTCCAAGAAACTA
CAAATGAAAGGGTATGACGCTCACCCCTCCATGTTCGCCCCATCGGGCCG
CATCCCGCAGGTGGAGTATGCACGCGAGCAAGTTACGAGGCCTGGCGAGC
CGTTGCAGTGGGAGAGAAACACGACGTGCTCACCCAACGGCTTGCCTCGT
CCCCCCTCCTCAATTCCTCTGGCTCATCCCCTTCCCCTCCCTCCCTTGAA
AACGCCTGCGCTCTTGCCTGTGCTACGGCCCTGGTGGAAGGAGGGAGGGA
GGGATCGCCGCTTGGTGTCGACGGGAAGGGTGGAAGGGTGGGAGAGTGCG
ATGAAGGGATCAAGGAAGGGTCTGTAGAGGCATGTGAGGGTGAGCTGGAG
ATGGCGGTGGTAAAGGGAGGGGAGGTTTACTTTTTAGAGCAAACGGACGT
GAAGGCGGCGTTGAGGGCGAGGCCCAGATAGATTCCCCATCGTCCGTTCG
GCGTCTCCCTCCTCGTGGCCGGCTGGGACTCGACGCACGGCTACCAGCTT
TACAAGACTGACCCGTCCGGTACGCCTGGCCCGGGCGTATGCCCAGGAAT
ACCGTCGGACTTACAGCGAGCCCGTCCCTGTGCGTCATCTTGCCGAACAC
ATTTGTGATGTAAAGCATACCTGCACGATGGATGGCCGCCTGCGTCAGAA
ACTCTACCGCGTGGACCGGCACGTGTTGGTGGGCGTAACGGGCATGACAG
CTGACGCCTTGGCATTGGCTGTTAACCACGGCCAGCCCCTCGTGGGCATC
AAGGCCAAGGACGGCGTTGTCCTCGTGGGTCGAAAAATGCTCGAGTCCAA
GAAACTACAAATGAAAGGGTATGACGCTCACCCCTCCATGTTCGCCCCAT
CGGGCCGCATCCCGCAGGTGGAGTATGCACGCGAGCAAGTTACGAGGCCT
GGCGAGCCGTTGCAGTGGGAGAGAAACACGACGTGCTCACCCAACGGCTT
GCCTCGTCCCCCCTCCTCAATTCCTCTGGCTCATCCCCTTCCCCTCCCTC
CCTTGAAAACGCCTGCGCTCTTGCCTGTGCTACGGCCCTGGTGGAAGGAG
GGAGGGAGGGATCGCCGCTTGGTGTCGACGGGAAGGGTGGAAGGGTGGGA
GAGTGCGATGAAGGGATCAAGGAAGGGTCTGTAGAGGCATGTGAGGGTGA
GCTGGAGATGGCGGTGGTAAAGGGAGGGGAGGTTTACTTTTTAGAGCAAA
CGGACGTGAAGGCGGCGTTGAGGGCGAGGCCCAGATAGATTCCCCATCGT
CCGTTCGGCGTCTCCCTCCTCGTGGCCGGCTGGGACTCGACGCACGGCTA
CCAGCTTTACAAGACTGACCCGTCCGGTACGCCTGGCCCGGGCGTATGCC
CAGGAATACCGTCGGACTTACAGCGAGCCCGTCCCTGTGCGTCATCTTGC
CGAACACATTTGTGATGTAAAGCATACCTGCACGATGGATGGCCGCCTGC
GTCAGAAACTCTACCGCGTGGACCGGCACGTGTTGGTGGGCGTAACGGGC
ATGACAGCTGACGCCTTGGCATTGGCTGTTAACCACGGCCAGCCCCTCGT
GGGCATCAAGGCCAAGGACGGCGTTGTCCTCGTGGGTCGAAAAATGCTCG
AGTCCAAGAAACTACAAATGAAAGGGTATGACGCTCACCCCTCCATGTTC
GCCCCATCGGGCCGCATCCCGCAGGTGGAGTATGCACGCGAG back to top
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