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Properties
| Property Name | Value |
|---|
| TranscriptId | 647456 |
| Track | FilteredModels2 |
| ProteinId | 647370 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_111 | supercontig | scaffold_111:37741..39202 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_11733 ID=mRNA_11733|Name=jgi.p|Nanoce1779_2|647370|organism=Nannochloropsis oceanica|type=mRNA|length=1462bp
GCCATCCTCGTCTCAAATCCTCTCCCCAATAAGCTTGAAAGCTCACGGAA
GAAGCCGACATCAACTCCCTCTTTCCCTCCCCTATCCTTGCTTGATTCAC
AGACCAAAGAAAATATAGTCATGCCCGACAATGAAAACAATCGGGACATG
CCTCCCGCCAAGAGCGAAGGCCTGGGCCTCGAGAAACTGGAGACCGAAGC
TGCATCTTCCTCCTTCCCTTCCTCCTCCTCTTACGACACCACCGCTGCAG
CTCTCAGCATTCTCAAGCGCTGTGAAGCCCGGTACAAACAAGAGGTCTTG
CACGTCGGGCGCAACCTCCGCACCTTTTTTGAGACCCACCTCGACACCTT
TTCCTCCACCTCCTCCTCCTCCTCACAAGCAGGCTCCACCGCCACTGCCA
CGGACACAAACCTCGGTAGTCTCTACAGTGATTACAACTTGACCATTTTC
TCTCACTCCCTCATCGGCGGTGCTTTCGGTTACGTGCTCGCCCGAGCGGT
TACCACTCGTTTGGCACCGTCCCCGCGTCTTTTTGCCCTGGTCAGCTTTA
CGGGCTTGTCCTCCATGCTTGCAGCTACTGCAGCCACGACGCTCGCCACC
TCGGACCTGGTGAAGAAAGCTACACAGGTTGTAGTGGAGGAGAAGGGCGG
GAAGGAAGGAGGGATGGAGGCACCGGCGTGGCCCTATTTGATCGTGTGCC
GTCCGGTCACGCAGTTGAAAGAGTGTGTGCAGGACGGAGGGTGCCGTCGG
TTACTGGCAGGGGGGAAGGTGGAGGGGGGGGAGGGGCTGCTGCTGGCCTA
CAAGAGGTGTAGGGCGAGAGCGGAGGTGTGGGCGACGCAGGATGAGTTTC
TAGCCATGCAGGAGGAGGAGGTCGGGGGGGAGGGAGGGAGGGAGGAGGAG
GACGAGGACGAGGAAGGGAGGTTTATGGGGGAGGGGGATGAAAGGTTTTG
GGGAGAGGGAGGGAGGGAAGGGACAAGAGGGGAAAATGAGAGCAGAAGCA
ATACCAATGCCGGAAGGAAATGGCAGTGAGGGTGGGAGGGAGGGAGGGAG
GGAGGAAGGTAGGTAGGTAGGGAGGTAGGTTGTGGTCAGGCCATGAGGAA
GCTTGGGTTGCCTTCCACGGTCATCTAACGGTCGAAGCCGAGCCAGCCTA
TAGAGTAAAGACCCTCCCTACGATACCATGAGCAGTGTGATACGCGTCAG
GCCAAGACAAAGGCAGGCTCTTGGAGTACGTCTGGCCATGAGGAAGTCTT
TAACTGTCCACAAACGGGGATTTGAAATTAAATTTAAAATTAAACAGACA
ATGTATAGAACTCCTCCGAGAGCGATCCGCTGAAGACATTTCTTGCCAGA
ATACACTGGCTTGAACATCAGTATGTATACATCTGGAAGTTTATATACAT
TTATAAGAGTGTATATGAGTATGTCTACAGGTATACGTTATTGAGAGATG
ATGCGTGGGACT back to topprotein sequence of jgi.p|Nanoce1779_2|647370 >mRNA_11733-protein ID=mRNA_11733-protein|Name=jgi.p|Nanoce1779_2|647370|organism=Nannochloropsis oceanica|type=polypeptide|length=343bp
AILVSNPLPNKLESSRKKPTSTPSFPPLSLLDSQTKENIVMPDNENNRDM
PPAKSEGLGLEKLETEAASSSFPSSSSYDTTAAALSILKRCEARYKQEVL
HVGRNLRTFFETHLDTFSSTSSSSSQAGSTATATDTNLGSLYSDYNLTIF
SHSLIGGAFGYVLARAVTTRLAPSPRLFALVSFTGLSSMLAATAATTLAT
SDLVKKATQVVVEEKGGKEGGMEAPAWPYLIVCRPVTQLKECVQDGGCRR
LLAGGKVEGGEGLLLAYKRCRARAEVWATQDEFLAMQEEEVGGEGGREEE
DEDEEGRFMGEGDERFWGEGGREGTRGENESRSNTNAGRKWQ* back to topmRNA from alignment at scaffold_111:37741..39202- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_11733 ID=mRNA_11733|Name=jgi.p|Nanoce1779_2|647370|organism=Nannochloropsis oceanica|type=mRNA|length=1462bp|location=Sequence derived from alignment at scaffold_111:37741..39202- (Nannochloropsis oceanica)
GCCATCCTCGTCTCAAATCCTCTCCCCAATAAGCTTGAAAGCTCACGGAA
GAAGCCGACATCAACTCCCTCTTTCCCTCCCCTATCCTTGCTTGATTCAC
AGACCAAAGAAAATATAGTCATGCCCGACAATGAAAACAATCGGGACATG
CCTCCCGCCAAGAGCGAAGGCCTGGGCCTCGAGAAACTGGAGACCGAAGC
TGCATCTTCCTCCTTCCCTTCCTCCTCCTCTTACGACACCACCGCTGCAG
CTCTCAGCATTCTCAAGCGCTGTGAAGCCCGGTACAAACAAGAGGTCTTG
CACGTCGGGCGCAACCTCCGCACCTTTTTTGAGACCCACCTCGACACCTT
TTCCTCCACCTCCTCCTCCTCCTCACAAGCAGGCTCCACCGCCACTGCCA
CGGACACAAACCTCGGTAGTCTCTACAGTGATTACAACTTGACCATTTTC
TCTCACTCCCTCATCGGCGGTGCTTTCGGTTACGTGCTCGCCCGAGCGGT
TACCACTCGTTTGGCACCGTCCCCGCGTCTTTTTGCCCTGGTCAGCTTTA
CGGGCTTGTCCTCCATGCTTGCAGCTACTGCAGCCACGACGCTCGCCACC
TCGGACCTGGTGAAGAAAGCTACACAGGTTGTAGTGGAGGAGAAGGGCGG
GAAGGAAGGAGGGATGGAGGCACCGGCGTGGCCCTATTTGATCGTGTGCC
GTCCGGTCACGCAGTTGAAAGAGTGTGTGCAGGACGGAGGGTGCCGTCGG
TTACTGGCAGGGGGGAAGGTGGAGGGGGGGGAGGGGCTGCTGCTGGCCTA
CAAGAGGTGTAGGGCGAGAGCGGAGGTGTGGGCGACGCAGGATGAGTTTC
TAGCCATGCAGGAGGAGGAGGTCGGGGGGGAGGGAGGGAGGGAGGAGGAG
GACGAGGACGAGGAAGGGAGGTTTATGGGGGAGGGGGATGAAAGGTTTTG
GGGAGAGGGAGGGAGGGAAGGGACAAGAGGGGAAAATGAGAGCAGAAGCA
ATACCAATGCCGGAAGGAAATGGCAGTGAGGGTGGGAGGGAGGGAGGGAG
GGAGGAAGGTAGGTAGGTAGGGAGGTAGGTTGTGGTCAGGCCATGAGGAA
GCTTGGGTTGCCTTCCACGGTCATCTAACGGTCGAAGCCGAGCCAGCCTA
TAGAGTAAAGACCCTCCCTACGATACCATGAGCAGTGTGATACGCGTCAG
GCCAAGACAAAGGCAGGCTCTTGGAGTACGTCTGGCCATGAGGAAGTCTT
TAACTGTCCACAAACGGGGATTTGAAATTAAATTTAAAATTAAACAGACA
ATGTATAGAACTCCTCCGAGAGCGATCCGCTGAAGACATTTCTTGCCAGA
ATACACTGGCTTGAACATCAGTATGTATACATCTGGAAGTTTATATACAT
TTATAAGAGTGTATATGAGTATGTCTACAGGTATACGTTATTGAGAGATG
ATGCGTGGGACT back to topCoding sequence (CDS) from alignment at scaffold_111:37741..39202- >mRNA_11733 ID=mRNA_11733|Name=jgi.p|Nanoce1779_2|647370|organism=Nannochloropsis oceanica|type=CDS|length=1029bp|location=Sequence derived from alignment at scaffold_111:37741..39202- (Nannochloropsis oceanica)
GCCATCCTCGTCTCAAATCCTCTCCCCAATAAGCTTGAAAGCTCACGGAA
GAAGCCGACATCAACTCCCTCTTTCCCTCCCCTATCCTTGCTTGATTCAC
AGACCAAAGAAAATATAGTCATGCCCGACAATGAAAACAATCGGGACATG
CCTCCCGCCAAGAGCGAAGGCCTGGGCCTCGAGAAACTGGAGACCGAAGC
TGCATCTTCCTCCTTCCCTTCCTCCTCCTCTTACGACACCACCGCTGCAG
CTCTCAGCATTCTCAAGCGCTGTGAAGCCCGGTACAAACAAGAGGTCTTG
CACGTCGGGCGCAACCTCCGCACCTTTTTTGAGACCCACCTCGACACCTT
TTCCTCCACCTCCTCCTCCTCCTCACAAGCAGGCTCCACCGCCACTGCCA
CGGACACAAACCTCGGTAGTCTCTACAGTGATTACAACTTGACCATTTTC
TCTCACTCCCTCATCGGCGGTGCTTTCGGTTACGTGCTCGCCCGAGCGGT
TACCACTCGTTTGGCACCGTCCCCGCGTCTTTTTGCCCTGGTCAGCTTTA
CGGGCTTGTCCTCCATGCTTGCAGCTACTGCAGCCACGACGCTCGCCACC
TCGGACCTGGTGAAGAAAGCTACACAGGTTGTAGTGGAGGAGAAGGGCGG
GAAGGAAGGAGGGATGGAGGCACCGGCGTGGCCCTATTTGATCGTGTGCC
GTCCGGTCACGCAGTTGAAAGAGTGTGTGCAGGACGGAGGGTGCCGTCGG
TTACTGGCAGGGGGGAAGGTGGAGGGGGGGGAGGGGCTGCTGCTGGCCTA
CAAGAGGTGTAGGGCGAGAGCGGAGGTGTGGGCGACGCAGGATGAGTTTC
TAGCCATGCAGGAGGAGGAGGTCGGGGGGGAGGGAGGGAGGGAGGAGGAG
GACGAGGACGAGGAAGGGAGGTTTATGGGGGAGGGGGATGAAAGGTTTTG
GGGAGAGGGAGGGAGGGAAGGGACAAGAGGGGAAAATGAGAGCAGAAGCA
ATACCAATGCCGGAAGGAAATGGCAGTGA back to top
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