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Properties
| Property Name | Value |
|---|
| TranscriptId | 646885 |
| Track | FilteredModels2 |
| ProteinId | 646799 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_108 | supercontig | scaffold_108:20301..22302 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_11614 ID=mRNA_11614|Name=jgi.p|Nanoce1779_2|646799|organism=Nannochloropsis oceanica|type=mRNA|length=1858bp
ATGTCAACGCCTGCCGAGAAGGAGGTCCAACGGAAAAAGGCCTACAAGAA
GGGTATCGACCAAGACGATGCCCGCCGCCGCCGAGAAGAGACGCAGATCC
AAATCCGGAAGAACAAACGAGAGGAGTCGCTCAACCAACGGAGGCGCACT
GATGACTTCGGTAGTGCCGTCTCGGGGGGCGTGCCCGGGGCAGCAGGGCT
TGTGACGGGGGGGTTCGGGGCGGTGGGAGGGGTGGGAGGAGCTGGGGCCG
ATGCGTCGGTGCAACAGCGTTTGGAGCACTTGCCAGAGATGGTGACGGGC
ATCACTTCGATGGACCCTTTGATGCAATTGGAGGCTACGACACAGTTCCG
CAAGTTGCTTAGTATTGAAAAGAACCCACCAATTCAGCACGTAATCAATG
CGGGGGTGGTTCCGCGGTTGGTGGAATTTCTTCAGCGGGCGGATAATCCT
CCTTTGCAGTTTGAGGCGGCCTGGGCACTAACTAACATTGCGTCGGGGAC
CTCGGAGCACACCAAGGTCGTGATTTCAGAGGGGGCAGTGCCCATTTTCG
TCCAGTTGCTAAGCAGTCCCAATGATGACGTGAGGGAGCAGGCGGTATGG
GCGCTAGGCAACATAGCTGGTGACTCTCCGCAGTGCCGGGACCTGGTCCT
GGGACAACATGCAATGCTCCCGCTCTTGCAGCAGCTGCACGTGAACAGCA
AGCTGTCCATGCTGCGAAATGCCACGTGGACGCTTTCGAATTTCTGCCGG
GGGAAGCCCCAGCCGGATTTCGAGGTGGTTAAAGCTGCGCTTCCTACGCT
GGCGCAGCTCATCTATTCACCGGACGAGGAGGTGCTGACAGACGCGTGTT
GGGCGCTGTCTTACCTTTCCGACGGTCCCAACGAGAAGATCCAAGCCGTG
ATCGAGGCGGGGGTATGCAAGCGACTTATTGAATTGCTGATGCATCCCAG
CCCGACCATTCAGACCCCGGCCTTGCGCACTGTGGGCAACATTGTAACGG
GAGACGACCTGCAAACACAAATTATTATTGGCTATCACGCGTTGCCGTGC
CTTCTGGCCATGCTGAACCACCAGAAGAAGGCCATTCGGAAGGAGGCCTG
CTGGACGATCTCAAACATCACAGCGGGGAACAAAGAGCAGATTCAGGCTG
TTATTGATCACAACATGGTGCGGCCCCTCATTCTGTTGTTGCAAAACGCG
GAGTTCGACGTGAAGAAGGAAGCCGCCTGGGCGATTTCGAATGCGACGAG
CGGTGGGACTTCTGAACAGGTGAAGCATTTGGTGGAGCAGGGGTGCATCA
AGCCCTTATGTGACCTGCTCGTGTCCGACGACAACAAAATTATTTCGGTC
GCCCTGGAGGGGTTGGAAAACATCCTCAAGGTGGGGGAGAAAGAGAACAA
GATGGTGGGCGCAGGGTACAATGAAATGGCTGCCTTGGTCGCCGAATTGG
GAGGGCTCCAGAAGCTGGAGGAATTGCAGAATCATACCTCGGAGCAGCTG
TATGAAAAAGCTGTGTCTCTGATTGAGCGGTTTTTCGGCGTGGATGAGGA
AGGGGCGGAGGGAGGGAATGTGGGAGGAGGGCAAGCGGCGTCATCGAATG
GGACGTTTTCGTTTGATACCGGGAGTGGAGGGGTGGGAGGAGGAGGGGGA
TTAGGAGAAGGGTTTGGAGGCGGAAGTCAGCCGCCGGGGGGTAATTTCAG
TTTCAATATGGGGTAGGAAGGGAAGGAGGGAGGGAGGGGAGGAGACTAAG
CTTTGTTGGTGTAGTGATGGAAGAGGGCTGAGTGAAAGAGTGTTTGTGTG
TGAGGGTTGTGCGTGCGTGCGAGAGAGAAAGCGGAAGAGAGAGAGAGAGA
GAAAGAGA back to topprotein sequence of jgi.p|Nanoce1779_2|646799 >mRNA_11614-protein ID=mRNA_11614-protein|Name=jgi.p|Nanoce1779_2|646799|organism=Nannochloropsis oceanica|type=polypeptide|length=572bp
MSTPAEKEVQRKKAYKKGIDQDDARRRREETQIQIRKNKREESLNQRRRT
DDFGSAVSGGVPGAAGLVTGGFGAVGGVGGAGADASVQQRLEHLPEMVTG
ITSMDPLMQLEATTQFRKLLSIEKNPPIQHVINAGVVPRLVEFLQRADNP
PLQFEAAWALTNIASGTSEHTKVVISEGAVPIFVQLLSSPNDDVREQAVW
ALGNIAGDSPQCRDLVLGQHAMLPLLQQLHVNSKLSMLRNATWTLSNFCR
GKPQPDFEVVKAALPTLAQLIYSPDEEVLTDACWALSYLSDGPNEKIQAV
IEAGVCKRLIELLMHPSPTIQTPALRTVGNIVTGDDLQTQIIIGYHALPC
LLAMLNHQKKAIRKEACWTISNITAGNKEQIQAVIDHNMVRPLILLLQNA
EFDVKKEAAWAISNATSGGTSEQVKHLVEQGCIKPLCDLLVSDDNKIISV
ALEGLENILKVGEKENKMVGAGYNEMAALVAELGGLQKLEELQNHTSEQL
YEKAVSLIERFFGVDEEGAEGGNVGGGQAASSNGTFSFDTGSGGVGGGGG
LGEGFGGGSQPPGGNFSFNMG* back to topmRNA from alignment at scaffold_108:20301..22302- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_11614 ID=mRNA_11614|Name=jgi.p|Nanoce1779_2|646799|organism=Nannochloropsis oceanica|type=mRNA|length=2002bp|location=Sequence derived from alignment at scaffold_108:20301..22302- (Nannochloropsis oceanica)
ATGTCAACGCCTGCCGAGAAGGAGGTCCAAGTACGTATGGTCGGAGAGAT
AAGGGTGTGGTTGGAAGGAGCGAACTTACTATAATCGTGCGGTTCTCCGC
ATCACACTCCCCTTCTTGATGTGCATGTGTGCCTCTCACCTTTAAATCAT
CCAACCCCCTCTCGCCTTTAACAGCGGAAAAAGGCCTACAAGAAGGGTAT
CGACCAAGACGATGCCCGCCGCCGCCGAGAAGAGACGCAGATCCAAATCC
GGAAGAACAAACGAGAGGAGTCGCTCAACCAACGGAGGCGCACTGATGAC
TTCGGTAGTGCCGTCTCGGGGGGCGTGCCCGGGGCAGCAGGGCTTGTGAC
GGGGGGGTTCGGGGCGGTGGGAGGGGTGGGAGGAGCTGGGGCCGATGCGT
CGGTGCAACAGCGTTTGGAGCACTTGCCAGAGATGGTGACGGGCATCACT
TCGATGGACCCTTTGATGCAATTGGAGGCTACGACACAGTTCCGCAAGTT
GCTTAGTATTGAAAAGAACCCACCAATTCAGCACGTAATCAATGCGGGGG
TGGTTCCGCGGTTGGTGGAATTTCTTCAGCGGGCGGATAATCCTCCTTTG
CAGTTTGAGGCGGCCTGGGCACTAACTAACATTGCGTCGGGGACCTCGGA
GCACACCAAGGTCGTGATTTCAGAGGGGGCAGTGCCCATTTTCGTCCAGT
TGCTAAGCAGTCCCAATGATGACGTGAGGGAGCAGGCGGTATGGGCGCTA
GGCAACATAGCTGGTGACTCTCCGCAGTGCCGGGACCTGGTCCTGGGACA
ACATGCAATGCTCCCGCTCTTGCAGCAGCTGCACGTGAACAGCAAGCTGT
CCATGCTGCGAAATGCCACGTGGACGCTTTCGAATTTCTGCCGGGGGAAG
CCCCAGCCGGATTTCGAGGTGGTTAAAGCTGCGCTTCCTACGCTGGCGCA
GCTCATCTATTCACCGGACGAGGAGGTGCTGACAGACGCGTGTTGGGCGC
TGTCTTACCTTTCCGACGGTCCCAACGAGAAGATCCAAGCCGTGATCGAG
GCGGGGGTATGCAAGCGACTTATTGAATTGCTGATGCATCCCAGCCCGAC
CATTCAGACCCCGGCCTTGCGCACTGTGGGCAACATTGTAACGGGAGACG
ACCTGCAAACACAAATTATTATTGGCTATCACGCGTTGCCGTGCCTTCTG
GCCATGCTGAACCACCAGAAGAAGGCCATTCGGAAGGAGGCCTGCTGGAC
GATCTCAAACATCACAGCGGGGAACAAAGAGCAGATTCAGGCTGTTATTG
ATCACAACATGGTGCGGCCCCTCATTCTGTTGTTGCAAAACGCGGAGTTC
GACGTGAAGAAGGAAGCCGCCTGGGCGATTTCGAATGCGACGAGCGGTGG
GACTTCTGAACAGGTGAAGCATTTGGTGGAGCAGGGGTGCATCAAGCCCT
TATGTGACCTGCTCGTGTCCGACGACAACAAAATTATTTCGGTCGCCCTG
GAGGGGTTGGAAAACATCCTCAAGGTGGGGGAGAAAGAGAACAAGATGGT
GGGCGCAGGGTACAATGAAATGGCTGCCTTGGTCGCCGAATTGGGAGGGC
TCCAGAAGCTGGAGGAATTGCAGAATCATACCTCGGAGCAGCTGTATGAA
AAAGCTGTGTCTCTGATTGAGCGGTTTTTCGGCGTGGATGAGGAAGGGGC
GGAGGGAGGGAATGTGGGAGGAGGGCAAGCGGCGTCATCGAATGGGACGT
TTTCGTTTGATACCGGGAGTGGAGGGGTGGGAGGAGGAGGGGGATTAGGA
GAAGGGTTTGGAGGCGGAAGTCAGCCGCCGGGGGGTAATTTCAGTTTCAA
TATGGGGTAGGAAGGGAAGGAGGGAGGGAGGGGAGGAGACTAAGCTTTGT
TGGTGTAGTGATGGAAGAGGGCTGAGTGAAAGAGTGTTTGTGTGTGAGGG
TTGTGCGTGCGTGCGAGAGAGAAAGCGGAAGAGAGAGAGAGAGAGAAAGA
GA back to topCoding sequence (CDS) from alignment at scaffold_108:20301..22302- >mRNA_11614 ID=mRNA_11614|Name=jgi.p|Nanoce1779_2|646799|organism=Nannochloropsis oceanica|type=CDS|length=3432bp|location=Sequence derived from alignment at scaffold_108:20301..22302- (Nannochloropsis oceanica)
CGGAAAAAGGCCTACAAGAAGGGTATCGACCAAGACGATGCCCGCCGCCG
CCGAGAAGAGACGCAGATCCAAATCCGGAAGAACAAACGAGAGGAGTCGC
TCAACCAACGGAGGCGCACTGATGACTTCGGTAGTGCCGTCTCGGGGGGC
GTGCCCGGGGCAGCAGGGCTTGTGACGGGGGGGTTCGGGGCGGTGGGAGG
GGTGGGAGGAGCTGGGGCCGATGCGTCGGTGCAACAGCGTTTGGAGCACT
TGCCAGAGATGGTGACGGGCATCACTTCGATGGACCCTTTGATGCAATTG
GAGGCTACGACACAGTTCCGCAAGTTGCTTAGTATTGAAAAGAACCCACC
AATTCAGCACGTAATCAATGCGGGGGTGGTTCCGCGGTTGGTGGAATTTC
TTCAGCGGGCGGATAATCCTCCTTTGCAGTTTGAGGCGGCCTGGGCACTA
ACTAACATTGCGTCGGGGACCTCGGAGCACACCAAGGTCGTGATTTCAGA
GGGGGCAGTGCCCATTTTCGTCCAGTTGCTAAGCAGTCCCAATGATGACG
TGAGGGAGCAGGCGGTATGGGCGCTAGGCAACATAGCTGGTGACTCTCCG
CAGTGCCGGGACCTGGTCCTGGGACAACATGCAATGCTCCCGCTCTTGCA
GCAGCTGCACGTGAACAGCAAGCTGTCCATGCTGCGAAATGCCACGTGGA
CGCTTTCGAATTTCTGCCGGGGGAAGCCCCAGCCGGATTTCGAGGTGGTT
AAAGCTGCGCTTCCTACGCTGGCGCAGCTCATCTATTCACCGGACGAGGA
GGTGCTGACAGACGCGTGTTGGGCGCTGTCTTACCTTTCCGACGGTCCCA
ACGAGAAGATCCAAGCCGTGATCGAGGCGGGGGTATGCAAGCGACTTATT
GAATTGCTGATGCATCCCAGCCCGACCATTCAGACCCCGGCCTTGCGCAC
TGTGGGCAACATTGTAACGGGAGACGACCTGCAAACACAAATTATTATTG
GCTATCACGCGTTGCCGTGCCTTCTGGCCATGCTGAACCACCAGAAGAAG
GCCATTCGGAAGGAGGCCTGCTGGACGATCTCAAACATCACAGCGGGGAA
CAAAGAGCAGATTCAGGCTGTTATTGATCACAACATGGTGCGGCCCCTCA
TTCTGTTGTTGCAAAACGCGGAGTTCGACGTGAAGAAGGAAGCCGCCTGG
GCGATTTCGAATGCGACGAGCGGTGGGACTTCTGAACAGGTGAAGCATTT
GGTGGAGCAGGGGTGCATCAAGCCCTTATGTGACCTGCTCGTGTCCGACG
ACAACAAAATTATTTCGGTCGCCCTGGAGGGGTTGGAAAACATCCTCAAG
GTGGGGGAGAAAGAGAACAAGATGGTGGGCGCAGGGTACAATGAAATGGC
TGCCTTGGTCGCCGAATTGGGAGGGCTCCAGAAGCTGGAGGAATTGCAGA
ATCATACCTCGGAGCAGCTGTATGAAAAAGCTGTGTCTCTGATTGAGCGG
TTTTTCGGCGTGGATGAGGAAGGGGCGGAGGGAGGGAATGTGGGAGGAGG
GCAAGCGGCGTCATCGAATGGGACGTTTTCGTTTGATACCGGGAGTGGAG
GGGTGGGAGGAGGAGGGGGATTAGGAGAAGGGTTTGGAGGCGGAAGTCAG
CCGCCGGGGGGTAATTTCAGTTTCAATATGGGGTAGATGTCAACGCCTGC
CGAGAAGGAGGTCCAACGGAAAAAGGCCTACAAGAAGGGTATCGACCAAG
ACGATGCCCGCCGCCGCCGAGAAGAGACGCAGATCCAAATCCGGAAGAAC
AAACGAGAGGAGTCGCTCAACCAACGGAGGCGCACTGATGACTTCGGTAG
TGCCGTCTCGGGGGGCGTGCCCGGGGCAGCAGGGCTTGTGACGGGGGGGT
TCGGGGCGGTGGGAGGGGTGGGAGGAGCTGGGGCCGATGCGTCGGTGCAA
CAGCGTTTGGAGCACTTGCCAGAGATGGTGACGGGCATCACTTCGATGGA
CCCTTTGATGCAATTGGAGGCTACGACACAGTTCCGCAAGTTGCTTAGTA
TTGAAAAGAACCCACCAATTCAGCACGTAATCAATGCGGGGGTGGTTCCG
CGGTTGGTGGAATTTCTTCAGCGGGCGGATAATCCTCCTTTGCAGTTTGA
GGCGGCCTGGGCACTAACTAACATTGCGTCGGGGACCTCGGAGCACACCA
AGGTCGTGATTTCAGAGGGGGCAGTGCCCATTTTCGTCCAGTTGCTAAGC
AGTCCCAATGATGACGTGAGGGAGCAGGCGGTATGGGCGCTAGGCAACAT
AGCTGGTGACTCTCCGCAGTGCCGGGACCTGGTCCTGGGACAACATGCAA
TGCTCCCGCTCTTGCAGCAGCTGCACGTGAACAGCAAGCTGTCCATGCTG
CGAAATGCCACGTGGACGCTTTCGAATTTCTGCCGGGGGAAGCCCCAGCC
GGATTTCGAGGTGGTTAAAGCTGCGCTTCCTACGCTGGCGCAGCTCATCT
ATTCACCGGACGAGGAGGTGCTGACAGACGCGTGTTGGGCGCTGTCTTAC
CTTTCCGACGGTCCCAACGAGAAGATCCAAGCCGTGATCGAGGCGGGGGT
ATGCAAGCGACTTATTGAATTGCTGATGCATCCCAGCCCGACCATTCAGA
CCCCGGCCTTGCGCACTGTGGGCAACATTGTAACGGGAGACGACCTGCAA
ACACAAATTATTATTGGCTATCACGCGTTGCCGTGCCTTCTGGCCATGCT
GAACCACCAGAAGAAGGCCATTCGGAAGGAGGCCTGCTGGACGATCTCAA
ACATCACAGCGGGGAACAAAGAGCAGATTCAGGCTGTTATTGATCACAAC
ATGGTGCGGCCCCTCATTCTGTTGTTGCAAAACGCGGAGTTCGACGTGAA
GAAGGAAGCCGCCTGGGCGATTTCGAATGCGACGAGCGGTGGGACTTCTG
AACAGGTGAAGCATTTGGTGGAGCAGGGGTGCATCAAGCCCTTATGTGAC
CTGCTCGTGTCCGACGACAACAAAATTATTTCGGTCGCCCTGGAGGGGTT
GGAAAACATCCTCAAGGTGGGGGAGAAAGAGAACAAGATGGTGGGCGCAG
GGTACAATGAAATGGCTGCCTTGGTCGCCGAATTGGGAGGGCTCCAGAAG
CTGGAGGAATTGCAGAATCATACCTCGGAGCAGCTGTATGAAAAAGCTGT
GTCTCTGATTGAGCGGTTTTTCGGCGTGGATGAGGAAGGGGCGGAGGGAG
GGAATGTGGGAGGAGGGCAAGCGGCGTCATCGAATGGGACGTTTTCGTTT
GATACCGGGAGTGGAGGGGTGGGAGGAGGAGGGGGATTAGGAGAAGGGTT
TGGAGGCGGAAGTCAGCCGCCGGGGGGTAATTTCAGTTTCAATATGGGGT
AGATGTCAACGCCTGCCGAGAAGGAGGTCCAA back to top
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