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Properties
| Property Name | Value |
|---|
| TranscriptId | 644537 |
| Track | FilteredModels2 |
| ProteinId | 644451 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_154 | supercontig | scaffold_154:7701..9536 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_11466 ID=mRNA_11466|Name=jgi.p|Nanoce1779_2|644451|organism=Nannochloropsis oceanica|type=mRNA|length=1002bp
ATGATGAAAGAAGAGGAGGCCGCGCGAGAGACAGTCGGGGAGACGCAGGA
GGAGATGCGCAAGCGGCACAAGAGCGAAGTGCGGCAACTGGAAGGGCAAA
CCCGGGCCATGCTGAAAAAGGCCCCCAAGCCCAAGAAAGCCGAAGTCCAG
GGCGAGGTGGCAAAGATGGAAAGGGATATAGAGGAGCGGCACAAGAAGGA
GCAGATGCGGTGGGCGGATGGAGGAGGAGGAGGAGGAGGAAAGGAAGACG
GTGTCAAAGGAGTTCGGTTCGCGCCTGCCATCAACATCAAGAAGGGCGAG
GGTGAGGGAAAAGCAGCAGGAGGAGGGGGCAAGGGCAACAGGGATGGAGA
GAGCGACGAGGAGGAAGATGAGAGCGGGATGAGCGAGGCGGAGAAGGTGG
CGCGGAAACGAGACAAGGCCCGGCGGAAGAAGGAACGCAAAGCCCAAAGA
GAAGCAGAGCGCCAAGCGGAGATCGAGGAGGCGAAGAGGCACATCGTCCC
TCCCCGCGAGATTGAGATGAAACAGCTCCTGTCCCTCCTATCCCCCATGG
GCCTGGACATCCACGAGGTGGCTGCCGATGGCCACTGCCTCTACCGATCT
GTGGCGCACCAGCTCATCAGCCACGGCCACCCGCCTCTGGACCACCACCA
AGTTCGACGAGCCGCGGCCCGGCATATGAGAGAGTACCCCCAGGATTTCA
TCCCCTTCCTCGCTGGGGGCAGGAAGGAGGGAGGGGAGGAGGGAGGGCTG
GAGGCGTATGCCTACAGGCTCGAAGAGACGGCAGAGTGGGGAGGGGAGCT
GGAGATACGAGCGCTGTGTCACGCCTACCAAAGACCCATCCGCGTGTTTG
CGGCGGAGCAGCCTGTTTACACGATGGGGGAGAGCGATTACCCGGAAGAG
GCGGCCCTCCTTCTGTCCTACCACCGACAGTTCTATGCCCTAGGGGAGCA
CTACAACAGCGTCGTGCCCGTGAAGGGAGGGAGGGCAGAAGAGGAGAGTT
AG back to topprotein sequence of jgi.p|Nanoce1779_2|644451 >mRNA_11466-protein ID=mRNA_11466-protein|Name=jgi.p|Nanoce1779_2|644451|organism=Nannochloropsis oceanica|type=polypeptide|length=334bp
MMKEEEAARETVGETQEEMRKRHKSEVRQLEGQTRAMLKKAPKPKKAEVQ
GEVAKMERDIEERHKKEQMRWADGGGGGGGKEDGVKGVRFAPAINIKKGE
GEGKAAGGGGKGNRDGESDEEEDESGMSEAEKVARKRDKARRKKERKAQR
EAERQAEIEEAKRHIVPPREIEMKQLLSLLSPMGLDIHEVAADGHCLYRS
VAHQLISHGHPPLDHHQVRRAAARHMREYPQDFIPFLAGGRKEGGEEGGL
EAYAYRLEETAEWGGELEIRALCHAYQRPIRVFAAEQPVYTMGESDYPEE
AALLLSYHRQFYALGEHYNSVVPVKGGRAEEES* back to topmRNA from alignment at scaffold_154:7701..9536- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_11466 ID=mRNA_11466|Name=jgi.p|Nanoce1779_2|644451|organism=Nannochloropsis oceanica|type=mRNA|length=1836bp|location=Sequence derived from alignment at scaffold_154:7701..9536- (Nannochloropsis oceanica)
ATGATGAAAGAAGAGGAGGCCGCGCGAGAGACAGTCGGGGAGACGCAGGA
GGAGATGCGCAAGCGGCACAAGAGCGAAGTGCGGGTAAGTCGCAGCAAGG
GAATGACAGAGCGTGGGAAGGGGGGGAGGAAACGAGGGAGAGGGTCGACA
TGGCCTTCGATGCTCGAGAGCTTCAAAAGGGTATCAATCTAGTTGCTAAT
AGGGCACAAGAGCCTGAGCCCCATGAGCCCTCGACATTTGCTCATCTCCT
CTTGTCTTCAACCTTTCTACATCCCCTTCCCTCATCCTCCCTTGCTGCCA
GCAACTGGAAGGGCAAACCCGGGCCATGCTGAAAAAGGCCCCCAAGCCCA
AGAAAGCCGAAGTCCAGGGCGAGGTGGCAAAGATGGAAAGGGATATAGAG
GAGCGGCACAAGAAGGAGCAGATGCGGTGGGCGGATGGGTAAGGGAGGGA
GGGAAGGAAAGGAGTGGAAGACCTGCCGCGGAGGGAATGGGATGGAATGT
AGAAAAGGGAGGGCGGCCGGTTTTCTTCATGTGGTCATGTGCCACAATGC
CAAGAGCCATGCCCTTTCTAGTTGTTTCTTCCCCCTTTCTCAATTTTCTC
GGTTTTTCCATACCAACCCCACGCAGAGGAGGAGGAGGAGGAGGAAAGGA
AGACGGTGTCAAAGGAGTTCGGTTCGCGCCTGCCATCAACATCAAGAAGG
GCGAGGGTGAGGGAAAAGCAGCAGGAGGAGGGGGCAAGGGCAACAGGGAT
GGAGAGAGCGACGAGGAGGAAGATGAGAGCGGGATGAGCGAGGCGGAGAA
GGTGGCGCGGAAACGAGACAAGGCCCGGCGGAAGAAGGAACGCAAAGCCC
AAAGGTACGTGTGGACAGGAAGAAGGACGGCAAACAGCCAAGAAGGTAAG
GGAAGTGAGAGAGGGGGGCATTCTTATCAACAGGTCCAGCCGGCTTTACT
TCCGACCTCCCCTCGTCATGCCCTCCCTTCCTCCCCCTCATCAGAGAAGC
AGAGCGCCAAGCGGAGATCGAGGAGGCGAAGAGGCACATCGTCCCTCCCC
GCGAGATTGAGATGAAACAGCTCCTGTCCCTCCTATCCCCCATGGGCCTG
GACATCCACGAGGTGGCTGCCGATGGCCACTGCCTCTACCGATCTGTGGC
GCACCAGGTGGGTCTCGCCGAAGCGCCTGCCTCCTGAAGACCCCCTCCCT
CCCTCCTCCCGCCGGAGTCCAAAACAGCTCCAGATCGGATGACACCCCGC
TCGCTCCACACGCCCTTGCTCACCTACATCGTCTCTCTTTCCTCCCTCCC
TCTCCACCTACCCACGCCAGCTCATCAGCCACGGCCACCCGCCTCTGGAC
CACCACCAAGTTCGACGAGCCGCGGCCCGGCATATGAGAGAGTACCCCCA
GGATTTCATCCCCTTCCTCGCTGGGGGCAGGAAGGAGGGAGGGGAGGAGG
GAGGGCTGGAGGCGTATGCCTACAGGCTCGAAGAGACGGCAGAGTGGGGA
GGGGAGCTGGAGATACGAGCGCTGGTAAGAGAGAGGGAGGGAGGGAGGGA
GGAAGGGGGAGATGGCCCAGGGAGATGGCCGACACAACCGCCAACGTCCT
CATTACCTCGCACCCTCACTTATCCATTCTACGCGTTCGTCTATCTGCAG
TGTCACGCCTACCAAAGACCCATCCGCGTGTTTGCGGCGGAGCAGCCTGT
TTACACGATGGGGGAGAGCGATTACCCGGAAGAGGCGGCCCTCCTTCTGT
CCTACCACCGACAGTTCTATGCCCTAGGGGAGCACTACAACAGCGTCGTG
CCCGTGAAGGGAGGGAGGGCAGAAGAGGAGAGTTAG back to topCoding sequence (CDS) from alignment at scaffold_154:7701..9536- >mRNA_11466 ID=mRNA_11466|Name=jgi.p|Nanoce1779_2|644451|organism=Nannochloropsis oceanica|type=CDS|length=6012bp|location=Sequence derived from alignment at scaffold_154:7701..9536- (Nannochloropsis oceanica)
TGTCACGCCTACCAAAGACCCATCCGCGTGTTTGCGGCGGAGCAGCCTGT
TTACACGATGGGGGAGAGCGATTACCCGGAAGAGGCGGCCCTCCTTCTGT
CCTACCACCGACAGTTCTATGCCCTAGGGGAGCACTACAACAGCGTCGTG
CCCGTGAAGGGAGGGAGGGCAGAAGAGGAGAGTTAGCTCATCAGCCACGG
CCACCCGCCTCTGGACCACCACCAAGTTCGACGAGCCGCGGCCCGGCATA
TGAGAGAGTACCCCCAGGATTTCATCCCCTTCCTCGCTGGGGGCAGGAAG
GAGGGAGGGGAGGAGGGAGGGCTGGAGGCGTATGCCTACAGGCTCGAAGA
GACGGCAGAGTGGGGAGGGGAGCTGGAGATACGAGCGCTGAGAAGCAGAG
CGCCAAGCGGAGATCGAGGAGGCGAAGAGGCACATCGTCCCTCCCCGCGA
GATTGAGATGAAACAGCTCCTGTCCCTCCTATCCCCCATGGGCCTGGACA
TCCACGAGGTGGCTGCCGATGGCCACTGCCTCTACCGATCTGTGGCGCAC
CAGAGGAGGAGGAGGAGGAGGAAAGGAAGACGGTGTCAAAGGAGTTCGGT
TCGCGCCTGCCATCAACATCAAGAAGGGCGAGGGTGAGGGAAAAGCAGCA
GGAGGAGGGGGCAAGGGCAACAGGGATGGAGAGAGCGACGAGGAGGAAGA
TGAGAGCGGGATGAGCGAGGCGGAGAAGGTGGCGCGGAAACGAGACAAGG
CCCGGCGGAAGAAGGAACGCAAAGCCCAAAGCAACTGGAAGGGCAAACCC
GGGCCATGCTGAAAAAGGCCCCCAAGCCCAAGAAAGCCGAAGTCCAGGGC
GAGGTGGCAAAGATGGAAAGGGATATAGAGGAGCGGCACAAGAAGGAGCA
GATGCGGTGGGCGGATGGATGATGAAAGAAGAGGAGGCCGCGCGAGAGAC
AGTCGGGGAGACGCAGGAGGAGATGCGCAAGCGGCACAAGAGCGAAGTGC
GGTGTCACGCCTACCAAAGACCCATCCGCGTGTTTGCGGCGGAGCAGCCT
GTTTACACGATGGGGGAGAGCGATTACCCGGAAGAGGCGGCCCTCCTTCT
GTCCTACCACCGACAGTTCTATGCCCTAGGGGAGCACTACAACAGCGTCG
TGCCCGTGAAGGGAGGGAGGGCAGAAGAGGAGAGTTAGCTCATCAGCCAC
GGCCACCCGCCTCTGGACCACCACCAAGTTCGACGAGCCGCGGCCCGGCA
TATGAGAGAGTACCCCCAGGATTTCATCCCCTTCCTCGCTGGGGGCAGGA
AGGAGGGAGGGGAGGAGGGAGGGCTGGAGGCGTATGCCTACAGGCTCGAA
GAGACGGCAGAGTGGGGAGGGGAGCTGGAGATACGAGCGCTGAGAAGCAG
AGCGCCAAGCGGAGATCGAGGAGGCGAAGAGGCACATCGTCCCTCCCCGC
GAGATTGAGATGAAACAGCTCCTGTCCCTCCTATCCCCCATGGGCCTGGA
CATCCACGAGGTGGCTGCCGATGGCCACTGCCTCTACCGATCTGTGGCGC
ACCAGAGGAGGAGGAGGAGGAGGAAAGGAAGACGGTGTCAAAGGAGTTCG
GTTCGCGCCTGCCATCAACATCAAGAAGGGCGAGGGTGAGGGAAAAGCAG
CAGGAGGAGGGGGCAAGGGCAACAGGGATGGAGAGAGCGACGAGGAGGAA
GATGAGAGCGGGATGAGCGAGGCGGAGAAGGTGGCGCGGAAACGAGACAA
GGCCCGGCGGAAGAAGGAACGCAAAGCCCAAAGCAACTGGAAGGGCAAAC
CCGGGCCATGCTGAAAAAGGCCCCCAAGCCCAAGAAAGCCGAAGTCCAGG
GCGAGGTGGCAAAGATGGAAAGGGATATAGAGGAGCGGCACAAGAAGGAG
CAGATGCGGTGGGCGGATGGATGATGAAAGAAGAGGAGGCCGCGCGAGAG
ACAGTCGGGGAGACGCAGGAGGAGATGCGCAAGCGGCACAAGAGCGAAGT
GCGGTGTCACGCCTACCAAAGACCCATCCGCGTGTTTGCGGCGGAGCAGC
CTGTTTACACGATGGGGGAGAGCGATTACCCGGAAGAGGCGGCCCTCCTT
CTGTCCTACCACCGACAGTTCTATGCCCTAGGGGAGCACTACAACAGCGT
CGTGCCCGTGAAGGGAGGGAGGGCAGAAGAGGAGAGTTAGCTCATCAGCC
ACGGCCACCCGCCTCTGGACCACCACCAAGTTCGACGAGCCGCGGCCCGG
CATATGAGAGAGTACCCCCAGGATTTCATCCCCTTCCTCGCTGGGGGCAG
GAAGGAGGGAGGGGAGGAGGGAGGGCTGGAGGCGTATGCCTACAGGCTCG
AAGAGACGGCAGAGTGGGGAGGGGAGCTGGAGATACGAGCGCTGAGAAGC
AGAGCGCCAAGCGGAGATCGAGGAGGCGAAGAGGCACATCGTCCCTCCCC
GCGAGATTGAGATGAAACAGCTCCTGTCCCTCCTATCCCCCATGGGCCTG
GACATCCACGAGGTGGCTGCCGATGGCCACTGCCTCTACCGATCTGTGGC
GCACCAGAGGAGGAGGAGGAGGAGGAAAGGAAGACGGTGTCAAAGGAGTT
CGGTTCGCGCCTGCCATCAACATCAAGAAGGGCGAGGGTGAGGGAAAAGC
AGCAGGAGGAGGGGGCAAGGGCAACAGGGATGGAGAGAGCGACGAGGAGG
AAGATGAGAGCGGGATGAGCGAGGCGGAGAAGGTGGCGCGGAAACGAGAC
AAGGCCCGGCGGAAGAAGGAACGCAAAGCCCAAAGCAACTGGAAGGGCAA
ACCCGGGCCATGCTGAAAAAGGCCCCCAAGCCCAAGAAAGCCGAAGTCCA
GGGCGAGGTGGCAAAGATGGAAAGGGATATAGAGGAGCGGCACAAGAAGG
AGCAGATGCGGTGGGCGGATGGATGATGAAAGAAGAGGAGGCCGCGCGAG
AGACAGTCGGGGAGACGCAGGAGGAGATGCGCAAGCGGCACAAGAGCGAA
GTGCGGTGTCACGCCTACCAAAGACCCATCCGCGTGTTTGCGGCGGAGCA
GCCTGTTTACACGATGGGGGAGAGCGATTACCCGGAAGAGGCGGCCCTCC
TTCTGTCCTACCACCGACAGTTCTATGCCCTAGGGGAGCACTACAACAGC
GTCGTGCCCGTGAAGGGAGGGAGGGCAGAAGAGGAGAGTTAGCTCATCAG
CCACGGCCACCCGCCTCTGGACCACCACCAAGTTCGACGAGCCGCGGCCC
GGCATATGAGAGAGTACCCCCAGGATTTCATCCCCTTCCTCGCTGGGGGC
AGGAAGGAGGGAGGGGAGGAGGGAGGGCTGGAGGCGTATGCCTACAGGCT
CGAAGAGACGGCAGAGTGGGGAGGGGAGCTGGAGATACGAGCGCTGAGAA
GCAGAGCGCCAAGCGGAGATCGAGGAGGCGAAGAGGCACATCGTCCCTCC
CCGCGAGATTGAGATGAAACAGCTCCTGTCCCTCCTATCCCCCATGGGCC
TGGACATCCACGAGGTGGCTGCCGATGGCCACTGCCTCTACCGATCTGTG
GCGCACCAGAGGAGGAGGAGGAGGAGGAAAGGAAGACGGTGTCAAAGGAG
TTCGGTTCGCGCCTGCCATCAACATCAAGAAGGGCGAGGGTGAGGGAAAA
GCAGCAGGAGGAGGGGGCAAGGGCAACAGGGATGGAGAGAGCGACGAGGA
GGAAGATGAGAGCGGGATGAGCGAGGCGGAGAAGGTGGCGCGGAAACGAG
ACAAGGCCCGGCGGAAGAAGGAACGCAAAGCCCAAAGCAACTGGAAGGGC
AAACCCGGGCCATGCTGAAAAAGGCCCCCAAGCCCAAGAAAGCCGAAGTC
CAGGGCGAGGTGGCAAAGATGGAAAGGGATATAGAGGAGCGGCACAAGAA
GGAGCAGATGCGGTGGGCGGATGGATGATGAAAGAAGAGGAGGCCGCGCG
AGAGACAGTCGGGGAGACGCAGGAGGAGATGCGCAAGCGGCACAAGAGCG
AAGTGCGGTGTCACGCCTACCAAAGACCCATCCGCGTGTTTGCGGCGGAG
CAGCCTGTTTACACGATGGGGGAGAGCGATTACCCGGAAGAGGCGGCCCT
CCTTCTGTCCTACCACCGACAGTTCTATGCCCTAGGGGAGCACTACAACA
GCGTCGTGCCCGTGAAGGGAGGGAGGGCAGAAGAGGAGAGTTAGCTCATC
AGCCACGGCCACCCGCCTCTGGACCACCACCAAGTTCGACGAGCCGCGGC
CCGGCATATGAGAGAGTACCCCCAGGATTTCATCCCCTTCCTCGCTGGGG
GCAGGAAGGAGGGAGGGGAGGAGGGAGGGCTGGAGGCGTATGCCTACAGG
CTCGAAGAGACGGCAGAGTGGGGAGGGGAGCTGGAGATACGAGCGCTGAG
AAGCAGAGCGCCAAGCGGAGATCGAGGAGGCGAAGAGGCACATCGTCCCT
CCCCGCGAGATTGAGATGAAACAGCTCCTGTCCCTCCTATCCCCCATGGG
CCTGGACATCCACGAGGTGGCTGCCGATGGCCACTGCCTCTACCGATCTG
TGGCGCACCAGAGGAGGAGGAGGAGGAGGAAAGGAAGACGGTGTCAAAGG
AGTTCGGTTCGCGCCTGCCATCAACATCAAGAAGGGCGAGGGTGAGGGAA
AAGCAGCAGGAGGAGGGGGCAAGGGCAACAGGGATGGAGAGAGCGACGAG
GAGGAAGATGAGAGCGGGATGAGCGAGGCGGAGAAGGTGGCGCGGAAACG
AGACAAGGCCCGGCGGAAGAAGGAACGCAAAGCCCAAAGCAACTGGAAGG
GCAAACCCGGGCCATGCTGAAAAAGGCCCCCAAGCCCAAGAAAGCCGAAG
TCCAGGGCGAGGTGGCAAAGATGGAAAGGGATATAGAGGAGCGGCACAAG
AAGGAGCAGATGCGGTGGGCGGATGGATGATGAAAGAAGAGGAGGCCGCG
CGAGAGACAGTCGGGGAGACGCAGGAGGAGATGCGCAAGCGGCACAAGAG
CGAAGTGCGGTGTCACGCCTACCAAAGACCCATCCGCGTGTTTGCGGCGG
AGCAGCCTGTTTACACGATGGGGGAGAGCGATTACCCGGAAGAGGCGGCC
CTCCTTCTGTCCTACCACCGACAGTTCTATGCCCTAGGGGAGCACTACAA
CAGCGTCGTGCCCGTGAAGGGAGGGAGGGCAGAAGAGGAGAGTTAGCTCA
TCAGCCACGGCCACCCGCCTCTGGACCACCACCAAGTTCGACGAGCCGCG
GCCCGGCATATGAGAGAGTACCCCCAGGATTTCATCCCCTTCCTCGCTGG
GGGCAGGAAGGAGGGAGGGGAGGAGGGAGGGCTGGAGGCGTATGCCTACA
GGCTCGAAGAGACGGCAGAGTGGGGAGGGGAGCTGGAGATACGAGCGCTG
AGAAGCAGAGCGCCAAGCGGAGATCGAGGAGGCGAAGAGGCACATCGTCC
CTCCCCGCGAGATTGAGATGAAACAGCTCCTGTCCCTCCTATCCCCCATG
GGCCTGGACATCCACGAGGTGGCTGCCGATGGCCACTGCCTCTACCGATC
TGTGGCGCACCAGAGGAGGAGGAGGAGGAGGAAAGGAAGACGGTGTCAAA
GGAGTTCGGTTCGCGCCTGCCATCAACATCAAGAAGGGCGAGGGTGAGGG
AAAAGCAGCAGGAGGAGGGGGCAAGGGCAACAGGGATGGAGAGAGCGACG
AGGAGGAAGATGAGAGCGGGATGAGCGAGGCGGAGAAGGTGGCGCGGAAA
CGAGACAAGGCCCGGCGGAAGAAGGAACGCAAAGCCCAAAGCAACTGGAA
GGGCAAACCCGGGCCATGCTGAAAAAGGCCCCCAAGCCCAAGAAAGCCGA
AGTCCAGGGCGAGGTGGCAAAGATGGAAAGGGATATAGAGGAGCGGCACA
AGAAGGAGCAGATGCGGTGGGCGGATGGATGATGAAAGAAGAGGAGGCCG
CGCGAGAGACAGTCGGGGAGACGCAGGAGGAGATGCGCAAGCGGCACAAG
AGCGAAGTGCGG back to top
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