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Properties
| Property Name | Value |
|---|
| TranscriptId | 451548 |
| Track | FilteredModels2 |
| ProteinId | 451462 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_94 | supercontig | scaffold_94:34448..36820 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_11385 ID=mRNA_11385|Name=jgi.p|Nanoce1779_2|451462|organism=Nannochloropsis oceanica|type=mRNA|length=1071bp
TGCTCGCATGAAAGTCCATGCGACGTCTGGAAAGTCGGGGGGTTAGTAAG
AACCGTGGGATAGACAACGGACAAACACTTAATTCTTGGGGGGCCGCTGC
ATTCTCATGTCCTCAAGCACTTAGCATTTCCCCCCTTCTTTAACAGCTCC
CCTATTGTAAACATGTCCTGCATACCTTGTGGTAACCCCGGTGCGGCCAT
CACTGCAGCTGTGACCACCCCAGATACCACCATGCCTTCCAAAGCCGAAG
TCCAGGCCCGCGGTCTTCTCATCGATCTTTATCGCGCCAAGCCCTGCATG
CCCATCATGGTCCGCCTGGCTTGGCACGACGCAGGCACGTTTTCCGCGAA
GGACAACACGGGCGGGGCCAATGCTTCCATTCGTTTCGATGCCGAAATCT
CCCACGGGGCGAATGCCGGCCTGACCTGGGCGGCGCAGCAGTTGCAGACG
ATCAAGGACGCCGTGCCCGAGATCGGCTACGCTGATCTTTACCAGCTCGC
CTCAGTCGTGGCTGTCGAGTTCGCCGGTGGTCCTTCTATCCCCTTCCGCT
TGGGCCGAAAGGACGCAAAGGAGAAGGAGGTCACCCCCGACGGCCGTCTG
CCGGACGCCAAAAAAGGCCACGAGCACCTCCGTGATATCTTCTACCGCAT
GGGCATGGTAGATAGGGAGATCGTTGCTCTCTCTGGCGCTCACGCCTTGG
GGAGGGCGCACCCTGACAGGTCGGGTTTCGACGGGGCCTGGACGAAGGAG
CCGCTGGTCTTCGATAACTCCTACTTCACGGAACTTCTTGCCAAGGAAGC
TGACCCCGCCCTCCTCAAGCTGCCTTCCGACCTGGCCCTGCTGGAGACCC
CTACGATGGCCAAATGGGTGAAGGCTTATGCCGCTGACGAGCAGCTGTTC
TTTCGGGACTATGCTGCGGCGCACGTGAAGTTGAGCGAGTTGGGACAGTT
CCAGTGAAGACGTTTATTGTCGCGTCGAGGGAGGGAAAGAGAGAAGGATT
GGAGAAGGGGGGGGGGGGAAGGGGGGTGAGAGATAACCAAGGAATGTGAG
TTCCGGCATGATAATGGATGG back to topprotein sequence of jgi.p|Nanoce1779_2|451462 >mRNA_11385-protein ID=mRNA_11385-protein|Name=jgi.p|Nanoce1779_2|451462|organism=Nannochloropsis oceanica|type=polypeptide|length=265bp
MSCIPCGNPGAAITAAVTTPDTTMPSKAEVQARGLLIDLYRAKPCMPIMV
RLAWHDAGTFSAKDNTGGANASIRFDAEISHGANAGLTWAAQQLQTIKDA
VPEIGYADLYQLASVVAVEFAGGPSIPFRLGRKDAKEKEVTPDGRLPDAK
KGHEHLRDIFYRMGMVDREIVALSGAHALGRAHPDRSGFDGAWTKEPLVF
DNSYFTELLAKEADPALLKLPSDLALLETPTMAKWVKAYAADEQLFFRDY
AAAHVKLSELGQFQ* back to topmRNA from alignment at scaffold_94:34448..36820- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_11385 ID=mRNA_11385|Name=jgi.p|Nanoce1779_2|451462|organism=Nannochloropsis oceanica|type=mRNA|length=2373bp|location=Sequence derived from alignment at scaffold_94:34448..36820- (Nannochloropsis oceanica)
TGCTCGCATGAAAGTCCATGCGACGTCTGGAAAGTCGGGGGGTTAGTAAG
AACCGTGGGATAGACAACGGACAAACACTTAATTCTTGGGGGGCCGCTGC
ATTCTCATGTCCTCAAGCACTTAGCATTTCCCCCCTTCTTTAACAGCTCC
CCTATTGTAAACATGTCCTGCATACCTTGTGGTAACCCCGGTGCGGCCAT
CACTGCAGCTGTGGTACGTGAACAACATGGGCAACACGCAAGCAGATCAA
AGAACAATCGAAGACATTGGCGTCTTCGGATATCCACTTCTTATGTCCTT
GTGTTCGATTTTGCTGGCGTGGCAATTACCATTTAGACATGCGCGTCCGT
CTTGTCGTAGGCATTCTTTCATAGAAATGGAACAATATAGCGGGCGGGGC
GGTCGCATGTGTTCAACAAAAGATTTGTGTCTTCTTCATTCGCAAATCAT
GTGTTTCTTTCTACAGCTCTGACGATGTCCACTCTACCACTCCCTACTCA
CAGACCACCCCAGATACCACCATGCCTTCCAAAGCCGAAGTCCAGGCCCG
CGGTCTTCTCATCGATCTTTATCGCGCCAAGCCCTGCATGCCCATCATGG
TCCGCCTGGCTTGGCACGACGCAGGCACGTTTTCCGCGAAGGACAACACG
GGCGGGGCCAATGCTTCCATTCGTTTCGATGCCGAAATCTCCCACGGGGC
GAATGCCGGCCTGACCTGGGCGGCGCAGCAGTTGCAGGTACGAAAGAAAG
TAGCAGCCGGCCGTGTTAAGGAAGGAGAGGGACAGACATTTCTTCTACTA
GGTTACCTCATCCCTCCCTCCCTCCCCAGACGATCAAGGACGCCGTGCCC
GAGATCGGCTACGCTGATCTTTACCAGCTCGCCTCAGTCGTGGCTGTCGA
GTTCGCCGGTGGTCCTTCTATCCCCTTCCGCTTGGGCCGAAAGGACGCAA
AGGAGAAGGAGGTACGAGTGGAGGGGGGGGGGAGGGACGGATGCTACACA
CACACCTCCCAAGAATCTCTTTATGCATTGATCTAACCTAGACGATGCTT
TACGTCGAATTCATTTTAATGTGACCCCGAATGATCGCTTGATTAATGCC
AAGTAAGGCCACGGAGCTCTTTGCCCCTTTTCCCACGCCTACACCCTACC
CTCCCCTTCCTCCCTTCCTCCCTCCCTCCCTCCTTTCAGGTCACCCCCGA
CGGCCGTCTGCCGGACGCCAAAAAAGGCCACGAGCACCTCCGTGATATCT
TCTACCGCATGGGCATGGTAGATAGGGAGATCGTTGCTCTCTCTGGCGCT
CACGCCTTGGGGAGGGCGCACCCTGACAGGTCGGGTTTCGACGGGGCCTG
GACGAAGGAGCCGCTGGTCTTCGATAACTCCTACTTCACGGTACGTCCCG
TCCCTCCCGTCCATCCCTCCTGCCCTCCCTTTCTTCCTCCCTTTTTCCTG
GGTGCCTGTGTTGTTGTTGTCTGAGTTTGAAGTTGTAGCACTGTTTCGAC
TTGAATGGCTATTACGACAGCGCGTGTCTTCCCTTCCGAACCACATAAAT
GATGTTTTTACGAATATTGGATGGTTTTATTGAATTTACTATAATCAACT
ACATGTAATTATCTGGAAGAAAGGGTGCTGTTCGTTGTTTTGAACTTACG
CTCACCCCCCCCCCCCCCTACACCTACACGAAGAGGAGCTCCTCAAAAAG
GCACAAACGCACACAATCTATCACATTTACACTCTCACTCAAATACATTC
ATTTTTCACACACTTAAATTTATTTATTTATACACACACACGCCCACACC
CACCCCCATCCCCCTACACCTACACGAACAGGAACTTCTTGCCAAGGAAG
CTGACCCCGCCCTCCTCAAGCTGCCTTCCGACCTGGCCCTGCTGGAGACC
CCTACGATGGCCAAATGGGTGAAGGCTTATGCCGCTGACGAGCAGCTGTT
CTTTCGGGACTATGCTGCGGCGCACGTGAAGTTGAGCGAGTTGGGACAGG
TAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGATTGGATAA
TTTCTGGTTGTGTTTGCTCGATATAGCGAGCACGGTGGCGAGGGAGGGAG
AGAAAAAGGGATGGAGGGAAGAAGGGATGGAGGGAAGAAGGGATGGAGGG
AAGGAGGGATGGTGGGGCTTGTGAAGAGGGGGTCTTCGTCATATTTTTTG
TCTTCCATCTTTTTTCTGACACTTCATTTTTTTCCAACCTGCACCCACAG
TTCCAGTGAAGACGTTTATTGTCGCGTCGAGGGAGGGAAAGAGAGAAGGA
TTGGAGAAGGGGGGGGGGGGAAGGGGGGTGAGAGATAACCAAGGAATGTG
AGTTCCGGCATGATAATGGATGG back to topCoding sequence (CDS) from alignment at scaffold_94:34448..36820- >mRNA_11385 ID=mRNA_11385|Name=jgi.p|Nanoce1779_2|451462|organism=Nannochloropsis oceanica|type=CDS|length=4770bp|location=Sequence derived from alignment at scaffold_94:34448..36820- (Nannochloropsis oceanica)
TTCCAGTGAGAACTTCTTGCCAAGGAAGCTGACCCCGCCCTCCTCAAGCT
GCCTTCCGACCTGGCCCTGCTGGAGACCCCTACGATGGCCAAATGGGTGA
AGGCTTATGCCGCTGACGAGCAGCTGTTCTTTCGGGACTATGCTGCGGCG
CACGTGAAGTTGAGCGAGTTGGGACAGGTCACCCCCGACGGCCGTCTGCC
GGACGCCAAAAAAGGCCACGAGCACCTCCGTGATATCTTCTACCGCATGG
GCATGGTAGATAGGGAGATCGTTGCTCTCTCTGGCGCTCACGCCTTGGGG
AGGGCGCACCCTGACAGGTCGGGTTTCGACGGGGCCTGGACGAAGGAGCC
GCTGGTCTTCGATAACTCCTACTTCACGACGATCAAGGACGCCGTGCCCG
AGATCGGCTACGCTGATCTTTACCAGCTCGCCTCAGTCGTGGCTGTCGAG
TTCGCCGGTGGTCCTTCTATCCCCTTCCGCTTGGGCCGAAAGGACGCAAA
GGAGAAGGAGACCACCCCAGATACCACCATGCCTTCCAAAGCCGAAGTCC
AGGCCCGCGGTCTTCTCATCGATCTTTATCGCGCCAAGCCCTGCATGCCC
ATCATGGTCCGCCTGGCTTGGCACGACGCAGGCACGTTTTCCGCGAAGGA
CAACACGGGCGGGGCCAATGCTTCCATTCGTTTCGATGCCGAAATCTCCC
ACGGGGCGAATGCCGGCCTGACCTGGGCGGCGCAGCAGTTGCAGATGTCC
TGCATACCTTGTGGTAACCCCGGTGCGGCCATCACTGCAGCTGTGTTCCA
GTGAGAACTTCTTGCCAAGGAAGCTGACCCCGCCCTCCTCAAGCTGCCTT
CCGACCTGGCCCTGCTGGAGACCCCTACGATGGCCAAATGGGTGAAGGCT
TATGCCGCTGACGAGCAGCTGTTCTTTCGGGACTATGCTGCGGCGCACGT
GAAGTTGAGCGAGTTGGGACAGGTCACCCCCGACGGCCGTCTGCCGGACG
CCAAAAAAGGCCACGAGCACCTCCGTGATATCTTCTACCGCATGGGCATG
GTAGATAGGGAGATCGTTGCTCTCTCTGGCGCTCACGCCTTGGGGAGGGC
GCACCCTGACAGGTCGGGTTTCGACGGGGCCTGGACGAAGGAGCCGCTGG
TCTTCGATAACTCCTACTTCACGACGATCAAGGACGCCGTGCCCGAGATC
GGCTACGCTGATCTTTACCAGCTCGCCTCAGTCGTGGCTGTCGAGTTCGC
CGGTGGTCCTTCTATCCCCTTCCGCTTGGGCCGAAAGGACGCAAAGGAGA
AGGAGACCACCCCAGATACCACCATGCCTTCCAAAGCCGAAGTCCAGGCC
CGCGGTCTTCTCATCGATCTTTATCGCGCCAAGCCCTGCATGCCCATCAT
GGTCCGCCTGGCTTGGCACGACGCAGGCACGTTTTCCGCGAAGGACAACA
CGGGCGGGGCCAATGCTTCCATTCGTTTCGATGCCGAAATCTCCCACGGG
GCGAATGCCGGCCTGACCTGGGCGGCGCAGCAGTTGCAGATGTCCTGCAT
ACCTTGTGGTAACCCCGGTGCGGCCATCACTGCAGCTGTGTTCCAGTGAG
AACTTCTTGCCAAGGAAGCTGACCCCGCCCTCCTCAAGCTGCCTTCCGAC
CTGGCCCTGCTGGAGACCCCTACGATGGCCAAATGGGTGAAGGCTTATGC
CGCTGACGAGCAGCTGTTCTTTCGGGACTATGCTGCGGCGCACGTGAAGT
TGAGCGAGTTGGGACAGGTCACCCCCGACGGCCGTCTGCCGGACGCCAAA
AAAGGCCACGAGCACCTCCGTGATATCTTCTACCGCATGGGCATGGTAGA
TAGGGAGATCGTTGCTCTCTCTGGCGCTCACGCCTTGGGGAGGGCGCACC
CTGACAGGTCGGGTTTCGACGGGGCCTGGACGAAGGAGCCGCTGGTCTTC
GATAACTCCTACTTCACGACGATCAAGGACGCCGTGCCCGAGATCGGCTA
CGCTGATCTTTACCAGCTCGCCTCAGTCGTGGCTGTCGAGTTCGCCGGTG
GTCCTTCTATCCCCTTCCGCTTGGGCCGAAAGGACGCAAAGGAGAAGGAG
ACCACCCCAGATACCACCATGCCTTCCAAAGCCGAAGTCCAGGCCCGCGG
TCTTCTCATCGATCTTTATCGCGCCAAGCCCTGCATGCCCATCATGGTCC
GCCTGGCTTGGCACGACGCAGGCACGTTTTCCGCGAAGGACAACACGGGC
GGGGCCAATGCTTCCATTCGTTTCGATGCCGAAATCTCCCACGGGGCGAA
TGCCGGCCTGACCTGGGCGGCGCAGCAGTTGCAGATGTCCTGCATACCTT
GTGGTAACCCCGGTGCGGCCATCACTGCAGCTGTGTTCCAGTGAGAACTT
CTTGCCAAGGAAGCTGACCCCGCCCTCCTCAAGCTGCCTTCCGACCTGGC
CCTGCTGGAGACCCCTACGATGGCCAAATGGGTGAAGGCTTATGCCGCTG
ACGAGCAGCTGTTCTTTCGGGACTATGCTGCGGCGCACGTGAAGTTGAGC
GAGTTGGGACAGGTCACCCCCGACGGCCGTCTGCCGGACGCCAAAAAAGG
CCACGAGCACCTCCGTGATATCTTCTACCGCATGGGCATGGTAGATAGGG
AGATCGTTGCTCTCTCTGGCGCTCACGCCTTGGGGAGGGCGCACCCTGAC
AGGTCGGGTTTCGACGGGGCCTGGACGAAGGAGCCGCTGGTCTTCGATAA
CTCCTACTTCACGACGATCAAGGACGCCGTGCCCGAGATCGGCTACGCTG
ATCTTTACCAGCTCGCCTCAGTCGTGGCTGTCGAGTTCGCCGGTGGTCCT
TCTATCCCCTTCCGCTTGGGCCGAAAGGACGCAAAGGAGAAGGAGACCAC
CCCAGATACCACCATGCCTTCCAAAGCCGAAGTCCAGGCCCGCGGTCTTC
TCATCGATCTTTATCGCGCCAAGCCCTGCATGCCCATCATGGTCCGCCTG
GCTTGGCACGACGCAGGCACGTTTTCCGCGAAGGACAACACGGGCGGGGC
CAATGCTTCCATTCGTTTCGATGCCGAAATCTCCCACGGGGCGAATGCCG
GCCTGACCTGGGCGGCGCAGCAGTTGCAGATGTCCTGCATACCTTGTGGT
AACCCCGGTGCGGCCATCACTGCAGCTGTGTTCCAGTGAGAACTTCTTGC
CAAGGAAGCTGACCCCGCCCTCCTCAAGCTGCCTTCCGACCTGGCCCTGC
TGGAGACCCCTACGATGGCCAAATGGGTGAAGGCTTATGCCGCTGACGAG
CAGCTGTTCTTTCGGGACTATGCTGCGGCGCACGTGAAGTTGAGCGAGTT
GGGACAGGTCACCCCCGACGGCCGTCTGCCGGACGCCAAAAAAGGCCACG
AGCACCTCCGTGATATCTTCTACCGCATGGGCATGGTAGATAGGGAGATC
GTTGCTCTCTCTGGCGCTCACGCCTTGGGGAGGGCGCACCCTGACAGGTC
GGGTTTCGACGGGGCCTGGACGAAGGAGCCGCTGGTCTTCGATAACTCCT
ACTTCACGACGATCAAGGACGCCGTGCCCGAGATCGGCTACGCTGATCTT
TACCAGCTCGCCTCAGTCGTGGCTGTCGAGTTCGCCGGTGGTCCTTCTAT
CCCCTTCCGCTTGGGCCGAAAGGACGCAAAGGAGAAGGAGACCACCCCAG
ATACCACCATGCCTTCCAAAGCCGAAGTCCAGGCCCGCGGTCTTCTCATC
GATCTTTATCGCGCCAAGCCCTGCATGCCCATCATGGTCCGCCTGGCTTG
GCACGACGCAGGCACGTTTTCCGCGAAGGACAACACGGGCGGGGCCAATG
CTTCCATTCGTTTCGATGCCGAAATCTCCCACGGGGCGAATGCCGGCCTG
ACCTGGGCGGCGCAGCAGTTGCAGATGTCCTGCATACCTTGTGGTAACCC
CGGTGCGGCCATCACTGCAGCTGTGTTCCAGTGAGAACTTCTTGCCAAGG
AAGCTGACCCCGCCCTCCTCAAGCTGCCTTCCGACCTGGCCCTGCTGGAG
ACCCCTACGATGGCCAAATGGGTGAAGGCTTATGCCGCTGACGAGCAGCT
GTTCTTTCGGGACTATGCTGCGGCGCACGTGAAGTTGAGCGAGTTGGGAC
AGGTCACCCCCGACGGCCGTCTGCCGGACGCCAAAAAAGGCCACGAGCAC
CTCCGTGATATCTTCTACCGCATGGGCATGGTAGATAGGGAGATCGTTGC
TCTCTCTGGCGCTCACGCCTTGGGGAGGGCGCACCCTGACAGGTCGGGTT
TCGACGGGGCCTGGACGAAGGAGCCGCTGGTCTTCGATAACTCCTACTTC
ACGACGATCAAGGACGCCGTGCCCGAGATCGGCTACGCTGATCTTTACCA
GCTCGCCTCAGTCGTGGCTGTCGAGTTCGCCGGTGGTCCTTCTATCCCCT
TCCGCTTGGGCCGAAAGGACGCAAAGGAGAAGGAGACCACCCCAGATACC
ACCATGCCTTCCAAAGCCGAAGTCCAGGCCCGCGGTCTTCTCATCGATCT
TTATCGCGCCAAGCCCTGCATGCCCATCATGGTCCGCCTGGCTTGGCACG
ACGCAGGCACGTTTTCCGCGAAGGACAACACGGGCGGGGCCAATGCTTCC
ATTCGTTTCGATGCCGAAATCTCCCACGGGGCGAATGCCGGCCTGACCTG
GGCGGCGCAGCAGTTGCAGATGTCCTGCATACCTTGTGGTAACCCCGGTG
CGGCCATCACTGCAGCTGTG back to top
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