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Properties
| Property Name | Value |
|---|
| TranscriptId | 615063 |
| Track | FilteredModels2 |
| ProteinId | 614977 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_94 | supercontig | scaffold_94:22449..23965 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_11382 ID=mRNA_11382|Name=jgi.p|Nanoce1779_2|614977|organism=Nannochloropsis oceanica|type=mRNA|length=1517bp
GGCAACCACCCCAACGAGCATCTCAGGAGCCACAGCAGCAACAGCCCCCT
CCTCACTCCCTCTCTCAACCTCAAGCCACCCCCACCCTCCCATCCCTCCA
AAATTTCTCCTCCTCCTCCTCCACGTCCATCTCCTCCACGTCCTCCTACC
CCGGGCACCCACCCCTGCCTTCCTCCCCCTCCCTCTCCCGGGAACTGCTC
ATGGCTCTCCGCCTCTTTTCTCAGGAGCTACAAAATGACTTGGCCCTTGC
TTCTGCCCGAGGTGAGGCAGCTGACACAGGAGCCCAGGCAGCCAGGGAGG
GCTTGCTTGCCCGTGCTCGTGCTCGAGATCCCACCCTCCTTCCAATTCTA
AGCCGCGCGTTGTTGGAGGGGATCAAGCCCGCGTCGCCCTTGGTGGTGGT
ACCTCAAGGGGAAGGGACGGTAGGGGCCAGGGCGGAGGCAGTGAAGGCTG
AGGCGAATGAAGTGTTGGTTTGGCACCTGCAGAATAAGGCGTTGGAGGCC
CTGGTGGAGGTATGGAGGGAGGGAAGAGGGGCAAAGAAGGCGAAGCAGCA
TGAGGAGGAGGAAGGAGGAGGAGGAGGAGGAGGAGGCGCGGATGGTGGAA
AGGAAGGGGGTAAGGAGACAGGGAAGCAGGAGGAGAATAACCAAATAGGG
TCCAAAATGAAGAAGGAGGTGGTGGAGGAGGAGAAGGTGGAGAAACGGAG
GGAGGAAAAGGAGATGGAGTAATTGCAAAGCAGAGAGGAAAGTTTTGCTG
GTGGTTTTGACATGCTATGCTATATTTTTTATAAAAGAGGATTTGTGGTT
TTAATATTTAGACTGGTAAACTAGTATATGGTTTTGATACTCGTGTTTAA
GCGATACATACTTGAGAAGGATATGGAGGGCGGTGCGACGGAGTGGGAAA
AGAGCAATCGCAGAGAGGGCGTGAAGTATTGAGTAAACCAGCGATCAGGG
GGAGGGAGAGAGACAGACAGAGAGGGGGGTGAGGTTATGAGCAAGAGGCA
CCACATATTGGGCAAAAGCAGGAGCGGTAGCAGCAACAACAGGACACTCG
CAAGGATAAGAAACAGCGAAAAGATTCACAAGGGAAGAGACCGATTCGGG
AGTAAGAGGAGCCTCAAGAAAGATGGGGGAGAAGAGAAAAAAGATGCAAA
ATGACAAGAAGAAGAAATTGACACGCGGGAAAGGAAAAGACGTGCGAGAG
AGATAAAGAGTACCTGCACGCTCTCACGTAGAATGGACTGGAGGTAGTAG
TGGTGATAAGGACTCGGGTCTCCCTACTTCACGCGTATGTCGGAGGAGCG
TATTAAAAGGGTATTAGAATGATCATATGCCACTTATGAGTCTATATTTC
GCAAATGTGAGATATACATTCACCCGCACGTTATGATGCCCACGCGGGGG
ATTTATCACTGGTGGGAAGTGGCGCGTGACAGCCTTAACGCCAATCTCAC
CACGGTCGACAAAACATCATGATGGCCCAAGAAAAAAAGAATGAAGAAGG
GGAACAAAGACAGCAGA back to topprotein sequence of jgi.p|Nanoce1779_2|614977 >mRNA_11382-protein ID=mRNA_11382-protein|Name=jgi.p|Nanoce1779_2|614977|organism=Nannochloropsis oceanica|type=polypeptide|length=174bp
MALRLFSQELQNDLALASARGEAADTGAQAAREGLLARARARDPTLLPIL
SRALLEGIKPASPLVVVPQGEGTVGARAEAVKAEANEVLVWHLQNKALEA
LVEVWREGRGAKKAKQHEEEEGGGGGGGGADGGKEGGKETGKQEENNQIG
SKMKKEVVEEEKVEKRREEKEME* back to topmRNA from alignment at scaffold_94:22449..23965- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_11382 ID=mRNA_11382|Name=jgi.p|Nanoce1779_2|614977|organism=Nannochloropsis oceanica|type=mRNA|length=1517bp|location=Sequence derived from alignment at scaffold_94:22449..23965- (Nannochloropsis oceanica)
GGCAACCACCCCAACGAGCATCTCAGGAGCCACAGCAGCAACAGCCCCCT
CCTCACTCCCTCTCTCAACCTCAAGCCACCCCCACCCTCCCATCCCTCCA
AAATTTCTCCTCCTCCTCCTCCACGTCCATCTCCTCCACGTCCTCCTACC
CCGGGCACCCACCCCTGCCTTCCTCCCCCTCCCTCTCCCGGGAACTGCTC
ATGGCTCTCCGCCTCTTTTCTCAGGAGCTACAAAATGACTTGGCCCTTGC
TTCTGCCCGAGGTGAGGCAGCTGACACAGGAGCCCAGGCAGCCAGGGAGG
GCTTGCTTGCCCGTGCTCGTGCTCGAGATCCCACCCTCCTTCCAATTCTA
AGCCGCGCGTTGTTGGAGGGGATCAAGCCCGCGTCGCCCTTGGTGGTGGT
ACCTCAAGGGGAAGGGACGGTAGGGGCCAGGGCGGAGGCAGTGAAGGCTG
AGGCGAATGAAGTGTTGGTTTGGCACCTGCAGAATAAGGCGTTGGAGGCC
CTGGTGGAGGTATGGAGGGAGGGAAGAGGGGCAAAGAAGGCGAAGCAGCA
TGAGGAGGAGGAAGGAGGAGGAGGAGGAGGAGGAGGCGCGGATGGTGGAA
AGGAAGGGGGTAAGGAGACAGGGAAGCAGGAGGAGAATAACCAAATAGGG
TCCAAAATGAAGAAGGAGGTGGTGGAGGAGGAGAAGGTGGAGAAACGGAG
GGAGGAAAAGGAGATGGAGTAATTGCAAAGCAGAGAGGAAAGTTTTGCTG
GTGGTTTTGACATGCTATGCTATATTTTTTATAAAAGAGGATTTGTGGTT
TTAATATTTAGACTGGTAAACTAGTATATGGTTTTGATACTCGTGTTTAA
GCGATACATACTTGAGAAGGATATGGAGGGCGGTGCGACGGAGTGGGAAA
AGAGCAATCGCAGAGAGGGCGTGAAGTATTGAGTAAACCAGCGATCAGGG
GGAGGGAGAGAGACAGACAGAGAGGGGGGTGAGGTTATGAGCAAGAGGCA
CCACATATTGGGCAAAAGCAGGAGCGGTAGCAGCAACAACAGGACACTCG
CAAGGATAAGAAACAGCGAAAAGATTCACAAGGGAAGAGACCGATTCGGG
AGTAAGAGGAGCCTCAAGAAAGATGGGGGAGAAGAGAAAAAAGATGCAAA
ATGACAAGAAGAAGAAATTGACACGCGGGAAAGGAAAAGACGTGCGAGAG
AGATAAAGAGTACCTGCACGCTCTCACGTAGAATGGACTGGAGGTAGTAG
TGGTGATAAGGACTCGGGTCTCCCTACTTCACGCGTATGTCGGAGGAGCG
TATTAAAAGGGTATTAGAATGATCATATGCCACTTATGAGTCTATATTTC
GCAAATGTGAGATATACATTCACCCGCACGTTATGATGCCCACGCGGGGG
ATTTATCACTGGTGGGAAGTGGCGCGTGACAGCCTTAACGCCAATCTCAC
CACGGTCGACAAAACATCATGATGGCCCAAGAAAAAAAGAATGAAGAAGG
GGAACAAAGACAGCAGA back to topCoding sequence (CDS) from alignment at scaffold_94:22449..23965- >mRNA_11382 ID=mRNA_11382|Name=jgi.p|Nanoce1779_2|614977|organism=Nannochloropsis oceanica|type=CDS|length=522bp|location=Sequence derived from alignment at scaffold_94:22449..23965- (Nannochloropsis oceanica)
ATGGCTCTCCGCCTCTTTTCTCAGGAGCTACAAAATGACTTGGCCCTTGC
TTCTGCCCGAGGTGAGGCAGCTGACACAGGAGCCCAGGCAGCCAGGGAGG
GCTTGCTTGCCCGTGCTCGTGCTCGAGATCCCACCCTCCTTCCAATTCTA
AGCCGCGCGTTGTTGGAGGGGATCAAGCCCGCGTCGCCCTTGGTGGTGGT
ACCTCAAGGGGAAGGGACGGTAGGGGCCAGGGCGGAGGCAGTGAAGGCTG
AGGCGAATGAAGTGTTGGTTTGGCACCTGCAGAATAAGGCGTTGGAGGCC
CTGGTGGAGGTATGGAGGGAGGGAAGAGGGGCAAAGAAGGCGAAGCAGCA
TGAGGAGGAGGAAGGAGGAGGAGGAGGAGGAGGAGGCGCGGATGGTGGAA
AGGAAGGGGGTAAGGAGACAGGGAAGCAGGAGGAGAATAACCAAATAGGG
TCCAAAATGAAGAAGGAGGTGGTGGAGGAGGAGAAGGTGGAGAAACGGAG
GGAGGAAAAGGAGATGGAGTAA back to top
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