|
|
Properties
| Property Name | Value |
| TranscriptId | 624778 |
| Track | FilteredModels2 |
| ProteinId | 624692 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_2 | supercontig | scaffold_2:1276059..1279419 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_1120 ID=mRNA_1120|Name=jgi.p|Nanoce1779_2|624692|organism=Nannochloropsis oceanica|type=mRNA|length=2556bp GTCGGCCTCTTCCATGTAGGCCTTCCCCCGGCCCCTTTGATCGCCCATCA TGGGTTGTGGGAGGGTGGTATTCCTGTCTGCGATGGGATGGGGTAGGGGG GGCATGTGAGCAAGAGGCGTGTGCCGGGGGTGAATGTCCGCCCGGGCACA TCGCGGGGCCTGGCGAGACTTGGCTACGGCAGGGACGTGACAGTAGGGCG AAGAATTGTCATGTTCCGATGCTTTGGGAGCGCGTGGTTTGACAAAGATA GGGACGGCCGGCGACGGGAATGCAAGGGCGCAACGGCATGACGCGATGCT GTTGGCAACTACGGCGGGCGTTGAAGCCAAGACGGCGAGTTCCATGCACG CGCCGCTAAAGCGCAACGCTTGTGTGTGTGCGTGTGTGCGTGCGTGTCTA TATGTGAAGGACGATCGGTGTGGGATGAGCAAGAAGACAGGAAGGACTCT TGGAGATGCCCCGTACCGTGCCGTGGGGTGTGTGTACCATCCGAGAAGCT TCCTCTTTCTCCCTCCTTGGCCTCGAGATCTATGTCCCCTAAGCAACGAC AGTGCATCCATATTCCGGGTTTTACTCTTACGCCTTCTTTCCCTTCCTTC CACAGGCCCCTCTTCCCAGCAAGCCAGCCAAAGCGATGCTCCGTCGCGTC GTTGCGCCCCCTGCACGTCGAGCCTTGGCCACCTCGAGCACTCCTCCGGC GGAACGCGACCCGGTCATTGTTTCCTTTGCGCGTACACCCATCGGAAAAT TCAATGGGGCGTTGGCTTCGTTGACAGCGCCGCAGCTTGGAAAGGTGGCA ATCCAGGCGGCTGTGGCCCGGGCTGGCATCCAGGGGGATGACGTGCAAGA GGTGCTGATGGGAAACGTGGTGAGCGCTGCCATTGGCCAAGCCCCCGCGC GGCAAGCGAGTAAGTTTGCGGGGTTACCCGACAAGACGATTGCAACGACG ATAAATAAAGTGTGCGCCAGCGGGATGAAGGCTTTGATGCTCGGCGCCCA AAGCATCATGTTGGGCCACGCGGACGTGATCGTGGCTGGGGGAATGGAGT CCATGAGCAACATTCCCTACTATCTTCCCAAGGCCCGCAGCGGCTACCGC TTAGGGCACGGTCAGTTGGTGGACGGTGTTATCTTTGATGGGTTATGGGA CCCGTATAACAACCAGCATATGGGCTTGTGTGCTGAAAAGTGCGCGAGAG ATTTTAGCATCTCCAGGGAGGCGCAGGATGCGTTTGCTTTGTTGAGTTAC ACGAGGACAAAGGCCTCGGTGGAGGGGGGGTTGTTCAAGGAGGAGATTGC CCCTGTGACGATCAAAGGGAGGAAGGGGGAGGAGGTGGTGGTGAACGACG AACAATACACGGCCATGGACCCGAAAAAGCTGCCGACGCTGAAGCCGGCG TTTTTGAAGGACGGGGGTGTGGTGACCGCGGGAAATGCTTCGTCGCTCAA CGATGGTGCGGCGGCCTTCGTCGTTATGAGTGCGGCTCGGGCTAAGGCGA TGGGCGTGACTCCTCTCGCGCGTATTTTGGGGTTTGGGGACGCGGAGCAG GCGCCAGTAGATTTCACGACGGCGCCGTCCCTGGCTGTGCCGGTGGCGTT GGGGAGGGCTGGGCTGACGCTCGCGGATGTGGATCTGCATGAGGTGAACG AGGCCTTTGCTGTGGTGGCCCTGGCCAATGCCAAGTTGTTGGGTGTGGAG GAGAGGAGGTTGAATGTGAATGGCGGGGCGGTGGGCTTAGGGCATCCGAT TGGCATGAGCGGGGCGAGGATTGTAGGGAGTTTGATGACCGGCTTGAAGC ACGGGAGGGAGGGAGGGAAAGAGGGAGGAAGGGTGGGGGTGGCGTCGATT TGTAACGTTGATCTCGCGGCTTCTTCTTTGATGGGTCATTAATTTCCAGG GGTCCGGCCCCTTATGTCTTATGTATCATGCTGCAGCTGCAGCTGTTGCT GTGACTCTCTCGTCTTTCTCCGCCCCATTCGCCTGCCTTGGCGCGGACGA AGCACAAGAACCATCTGTAAAATCCCGCCTCCATACACCCTCTCTCCCTC CACCTATGAAGAATAAATTACTTGCGCATTCTCTTCCCAATAGCACTTTC CGTTCTCGTCCTGCGCCACCACCAACTGCATCGCCTCCTCTTGAGAAAAC AAGCCCCCCTCCCTCCCTCCCTCCTCTAGACCTTCATTCAAGAGCTCTAC AAACTGAGGAAAAGGCAACCCATCGCCATGGGTTTGCAACGCCGCGTTCA GCCGCGACAAAAAGAAACCCCCCCGCGCATTCGCTCCCGGCGACTGAAAT CGGGCCTTCTTCTTTCCTCCCCCCTTCTTGATGGGCGATCCTCCCTCGCT CCCTGCCTCGTCCTCCTCGTCCTCGTCCTCCTCGTCCGTCCCTTCCGAAC CGCCCGATTTACGACCGCGCCGTCTTCTCCTTCTTTGGTTGCTACCTTTG TTCTCCTTGTCCTCCTCCTCTCCCTCCTCCTCCTCTTCTTCCTCCTCCTC CTCCTCGGCGGTGGGCGGGAGGGACGAAGCGGTGGAAGGGAGGCGGCCGT GCTGCT back to topprotein sequence of jgi.p|Nanoce1779_2|624692 >mRNA_1120-protein ID=mRNA_1120-protein|Name=jgi.p|Nanoce1779_2|624692|organism=Nannochloropsis oceanica|type=polypeptide|length=419bp MLRRVVAPPARRALATSSTPPAERDPVIVSFARTPIGKFNGALASLTAPQ LGKVAIQAAVARAGIQGDDVQEVLMGNVVSAAIGQAPARQASKFAGLPDK TIATTINKVCASGMKALMLGAQSIMLGHADVIVAGGMESMSNIPYYLPKA RSGYRLGHGQLVDGVIFDGLWDPYNNQHMGLCAEKCARDFSISREAQDAF ALLSYTRTKASVEGGLFKEEIAPVTIKGRKGEEVVVNDEQYTAMDPKKLP TLKPAFLKDGGVVTAGNASSLNDGAAAFVVMSAARAKAMGVTPLARILGF GDAEQAPVDFTTAPSLAVPVALGRAGLTLADVDLHEVNEAFAVVALANAK LLGVEERRLNVNGGAVGLGHPIGMSGARIVGSLMTGLKHGREGGKEGGRV GVASICNVDLAASSLMGH* back to topmRNA from alignment at scaffold_2:1276059..1279419- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_1120 ID=mRNA_1120|Name=jgi.p|Nanoce1779_2|624692|organism=Nannochloropsis oceanica|type=mRNA|length=3361bp|location=Sequence derived from alignment at scaffold_2:1276059..1279419- (Nannochloropsis oceanica) GTCGGCCTCTTCCATGTAGGCCTTCCCCCGGCCCCTTTGATCGCCCATCA
TGGGTTGTGGGAGGGTGGTATTCCTGTCTGCGATGGGATGGGGTAGGGGG
GGCATGTGAGCAAGAGGCGTGTGCCGGGGGTGAATGTCCGCCCGGGCACA
TCGCGGGGCCTGGCGAGACTTGGCTACGGCAGGGACGTGACAGTAGGGCG
AAGAATTGTCATGTTCCGATGCTTTGGGAGCGCGTGGTTTGACAAAGATA
GGGACGGCCGGCGACGGGAATGCAAGGGCGCAACGGCATGACGCGATGCT
GTTGGCAACTACGGCGGGCGTTGAAGCCAAGACGGCGAGTTCCATGCACG
CGCCGCTAAAGCGCAACGCTTGTGTGTGTGCGTGTGTGCGTGCGTGTCTA
TATGTGAAGGACGATCGGTGTGGGATGAGCAAGAAGACAGGAAGGACTCT
TGGAGATGCCCCGTACCGTGCCGTGGGGTGTGTGTACCATCCGAGAAGCT
TCCTCTTTCTCCCTCCTTGGCCTCGAGATCTATGTCCCCTAAGCAACGAC
AGTGCATCCATATTCCGGGTTTTACTCTTACGCCTTCTTTCCCTTCCTTC
CACAGGCCCCTCTTCCCAGCAAGCCAGCCAAAGCGATGCTCCGTCGCGTC
GTTGCGCCCCCTGCACGTCGAGCCTTGGCCACCTCGAGCACTCCTCCGGC
GGAACGCGACCCGGTCATTGTTTCCTTTGCGCGTACACCCATCGGAAAAT
TCAATGGGGCGTTGGCTTCGTTGACAGCGCCGCAGCTTGGAAAGGTGGCA
ATCCAGGCGGCTGTGGCCCGGGCTGGCATCCAGGGGGATGACGTGCAAGA
GGTGCTGATGGGAAACGTGGTGAGCGCTGCCATTGGCCAAGCCCCCGCGC
GGCAAGCGAGTAAGTTTGCGGGGTTACCCGACAAGACGATTGCAACGACG
ATAAATAAAGTGTGCGCCAGCGGGATGAAGGCTTTGATGCTCGGCGCCCA
AAGCATCATGTTGGGCCACGCGGACGTGATCGTGGCTGGGGGAATGGAGT
CCATGAGCAACATTCCCTACTATCTTCCCAAGGCCCGCAGCGGCTACCGC
TTAGGGCACGGTCAGTTGGTGGACGGTGTTATCTTTGATGGGTTATGGGA
CCCGTATAACAACCAGGTAGGTCGACGAGGAAAAACCGTGAAGAGGGACG
AATTCATGCAACGTTACTCCCACACCACTTGACCCCTCACCTCACCCCAC
CTCTTGTACAGCATATGGGCTTGTGTGCTGAAAAGTGCGCGAGAGATTTT
AGCATCTCCAGGGAGGCGCAGGATGCGTTTGCTTTGTTGAGTTACACGAG
GACAAAGGCCTCGGTGGAGGGGGGGTTGTTCAAGGAGGAGATTGCCCCTG
TGACGATCAAAGGGAGGAAGGGGGAGGAGGTGGTGGTGAACGACGAACAA
TACACGGCCATGGACCCGAAAAAGCTGCCGACGCTGAAGCCGGCGTTTTT
GAAGGACGGGGGTGTGGTGACCGCGGGAAATGCTTCGTCGCTCAACGATG
GTGCGGCGGCCTTCGTCGTTATGAGTGCGGCTCGGGCTAAGGCGATGGGC
GTGACTCCTCTCGCGCGTATTTTGGGGTTTGGGGACGCGGAGCAGGCGCC
AGTAGATTTCACGACGGCGCCGTCCCTGGCTGTGCCGGTGGCGTTGGGGA
GGGCTGGGCTGACGCTCGCGGATGTGGATCTGCATGAGGTGAACGAGGCC
TTTGCTGTGGTGGCCCTGGCCAATGCCAAGTTGTTGGGTGTGGAGGAGAG
GAGGTTGAATGTGAATGGCGGGGCGGTGGGCTTAGGGCATCCGATTGGCA
TGAGCGGGGCGAGGATTGTAGGGAGTTTGATGACCGGCTTGAAGCACGGG
AGGGAGGGAGGGAAAGAGGGAGGAAGGGTGGGGGTGGCGTCGATTTGTAA
CGGTGGGGGGGGGGGCGTCGGCGATGGTGGTGGAGAGGTTGAGCTAGGTC
AGATAAGGGGGGGGGGGAGACAGGGAGGAAGAGGAAAGGAAAGAAATGAA
TGGCTGCTCGGCGGAGAAGGTAGGCTTCTCACATGCATGGAAGAAGACGA
GAGAAAGAGAGAACATGGAGGAGGGGGAGAAAAAGGCAATCAATCATTTC
AGAGGTGAATTTGTCTCCCAACTCTTGCTGCTGCTCTCAGTGCTAGTCGG
TGTCTGTCTGTTGGTTCCTTTTGTGCGCCCTGCAAACTTGTGTCTATCCC
TCAGGGTTTCCTCCTGTCAATGTCCCCGCAAAGCTGGACTGCTGTTCCCT
CCCTCCCTCCCTCTATCCTTCCCTTCGCCATCTTCACGCTCGAGTCTATT
ATCGCTATTATGCATATTCTTTTCTGGGAGTGGGGAGGGAGGAAAGGAGG
GAGAAAGGAAGGGAGGGCGCCAAGAGGCACCCTACATTTATTGGAGGGTA
TGTATGTACCGTGACCGTGTGTTCCTTTTGGTATGGGTGTGGCAGCTCGC
TGTTGCTGCTGATACTCCTTCTTCTCATTCCTCTCATTCCCCGTGTTCCT
CCTCGGTGCGCTCTTCGTCTGTGCTTGCGCCCCCTCTCTTCCTCGTCTTT
TCCCTTTTCTCTTTTCCCTCCCCGTCCTCATTACTGATTTATCTACCTAC
GTACGTCTGCAGTTGATCTCGCGGCTTCTTCTTTGATGGGTCATTAATTT
CCAGGGGTCCGGCCCCTTATGTCTTATGTATCATGCTGCAGCTGCAGCTG
TTGCTGTGACTCTCTCGTCTTTCTCCGCCCCATTCGCCTGCCTTGGCGCG
GACGAAGCACAAGAACCATCTGTAAAATCCCGCCTCCATACACCCTCTCT
CCCTCCACCTATGAAGAATAAATTACTTGCGCATTCTCTTCCCAATAGCA
CTTTCCGTTCTCGTCCTGCGCCACCACCAACTGCATCGCCTCCTCTTGAG
AAAACAAGCCCCCCTCCCTCCCTCCCTCCTCTAGACCTTCATTCAAGAGC
TCTACAAACTGAGGAAAAGGCAACCCATCGCCATGGGTTTGCAACGCCGC
GTTCAGCCGCGACAAAAAGAAACCCCCCCGCGCATTCGCTCCCGGCGACT
GAAATCGGGCCTTCTTCTTTCCTCCCCCCTTCTTGATGGGCGATCCTCCC
TCGCTCCCTGCCTCGTCCTCCTCGTCCTCGTCCTCCTCGTCCGTCCCTTC
CGAACCGCCCGATTTACGACCGCGCCGTCTTCTCCTTCTTTGGTTGCTAC
CTTTGTTCTCCTTGTCCTCCTCCTCTCCCTCCTCCTCCTCTTCTTCCTCC
TCCTCCTCCTCGGCGGTGGGCGGGAGGGACGAAGCGGTGGAAGGGAGGCG
GCCGTGCTGCT back to topCoding sequence (CDS) from alignment at scaffold_2:1276059..1279419- >mRNA_1120 ID=mRNA_1120|Name=jgi.p|Nanoce1779_2|624692|organism=Nannochloropsis oceanica|type=CDS|length=3771bp|location=Sequence derived from alignment at scaffold_2:1276059..1279419- (Nannochloropsis oceanica) TTGATCTCGCGGCTTCTTCTTTGATGGGTCATTAACATATGGGCTTGTGT GCTGAAAAGTGCGCGAGAGATTTTAGCATCTCCAGGGAGGCGCAGGATGC GTTTGCTTTGTTGAGTTACACGAGGACAAAGGCCTCGGTGGAGGGGGGGT TGTTCAAGGAGGAGATTGCCCCTGTGACGATCAAAGGGAGGAAGGGGGAG GAGGTGGTGGTGAACGACGAACAATACACGGCCATGGACCCGAAAAAGCT GCCGACGCTGAAGCCGGCGTTTTTGAAGGACGGGGGTGTGGTGACCGCGG GAAATGCTTCGTCGCTCAACGATGGTGCGGCGGCCTTCGTCGTTATGAGT GCGGCTCGGGCTAAGGCGATGGGCGTGACTCCTCTCGCGCGTATTTTGGG GTTTGGGGACGCGGAGCAGGCGCCAGTAGATTTCACGACGGCGCCGTCCC TGGCTGTGCCGGTGGCGTTGGGGAGGGCTGGGCTGACGCTCGCGGATGTG GATCTGCATGAGGTGAACGAGGCCTTTGCTGTGGTGGCCCTGGCCAATGC CAAGTTGTTGGGTGTGGAGGAGAGGAGGTTGAATGTGAATGGCGGGGCGG TGGGCTTAGGGCATCCGATTGGCATGAGCGGGGCGAGGATTGTAGGGAGT TTGATGACCGGCTTGAAGCACGGGAGGGAGGGAGGGAAAGAGGGAGGAAG GGTGGGGGTGGCGTCGATTTGTAACGATGCTCCGTCGCGTCGTTGCGCCC CCTGCACGTCGAGCCTTGGCCACCTCGAGCACTCCTCCGGCGGAACGCGA CCCGGTCATTGTTTCCTTTGCGCGTACACCCATCGGAAAATTCAATGGGG CGTTGGCTTCGTTGACAGCGCCGCAGCTTGGAAAGGTGGCAATCCAGGCG GCTGTGGCCCGGGCTGGCATCCAGGGGGATGACGTGCAAGAGGTGCTGAT GGGAAACGTGGTGAGCGCTGCCATTGGCCAAGCCCCCGCGCGGCAAGCGA GTAAGTTTGCGGGGTTACCCGACAAGACGATTGCAACGACGATAAATAAA GTGTGCGCCAGCGGGATGAAGGCTTTGATGCTCGGCGCCCAAAGCATCAT GTTGGGCCACGCGGACGTGATCGTGGCTGGGGGAATGGAGTCCATGAGCA ACATTCCCTACTATCTTCCCAAGGCCCGCAGCGGCTACCGCTTAGGGCAC GGTCAGTTGGTGGACGGTGTTATCTTTGATGGGTTATGGGACCCGTATAA CAACCAGTTGATCTCGCGGCTTCTTCTTTGATGGGTCATTAACATATGGG CTTGTGTGCTGAAAAGTGCGCGAGAGATTTTAGCATCTCCAGGGAGGCGC AGGATGCGTTTGCTTTGTTGAGTTACACGAGGACAAAGGCCTCGGTGGAG GGGGGGTTGTTCAAGGAGGAGATTGCCCCTGTGACGATCAAAGGGAGGAA GGGGGAGGAGGTGGTGGTGAACGACGAACAATACACGGCCATGGACCCGA AAAAGCTGCCGACGCTGAAGCCGGCGTTTTTGAAGGACGGGGGTGTGGTG ACCGCGGGAAATGCTTCGTCGCTCAACGATGGTGCGGCGGCCTTCGTCGT TATGAGTGCGGCTCGGGCTAAGGCGATGGGCGTGACTCCTCTCGCGCGTA TTTTGGGGTTTGGGGACGCGGAGCAGGCGCCAGTAGATTTCACGACGGCG CCGTCCCTGGCTGTGCCGGTGGCGTTGGGGAGGGCTGGGCTGACGCTCGC GGATGTGGATCTGCATGAGGTGAACGAGGCCTTTGCTGTGGTGGCCCTGG CCAATGCCAAGTTGTTGGGTGTGGAGGAGAGGAGGTTGAATGTGAATGGC GGGGCGGTGGGCTTAGGGCATCCGATTGGCATGAGCGGGGCGAGGATTGT AGGGAGTTTGATGACCGGCTTGAAGCACGGGAGGGAGGGAGGGAAAGAGG GAGGAAGGGTGGGGGTGGCGTCGATTTGTAACGATGCTCCGTCGCGTCGT TGCGCCCCCTGCACGTCGAGCCTTGGCCACCTCGAGCACTCCTCCGGCGG AACGCGACCCGGTCATTGTTTCCTTTGCGCGTACACCCATCGGAAAATTC AATGGGGCGTTGGCTTCGTTGACAGCGCCGCAGCTTGGAAAGGTGGCAAT CCAGGCGGCTGTGGCCCGGGCTGGCATCCAGGGGGATGACGTGCAAGAGG TGCTGATGGGAAACGTGGTGAGCGCTGCCATTGGCCAAGCCCCCGCGCGG CAAGCGAGTAAGTTTGCGGGGTTACCCGACAAGACGATTGCAACGACGAT AAATAAAGTGTGCGCCAGCGGGATGAAGGCTTTGATGCTCGGCGCCCAAA GCATCATGTTGGGCCACGCGGACGTGATCGTGGCTGGGGGAATGGAGTCC ATGAGCAACATTCCCTACTATCTTCCCAAGGCCCGCAGCGGCTACCGCTT AGGGCACGGTCAGTTGGTGGACGGTGTTATCTTTGATGGGTTATGGGACC CGTATAACAACCAGTTGATCTCGCGGCTTCTTCTTTGATGGGTCATTAAC ATATGGGCTTGTGTGCTGAAAAGTGCGCGAGAGATTTTAGCATCTCCAGG GAGGCGCAGGATGCGTTTGCTTTGTTGAGTTACACGAGGACAAAGGCCTC GGTGGAGGGGGGGTTGTTCAAGGAGGAGATTGCCCCTGTGACGATCAAAG GGAGGAAGGGGGAGGAGGTGGTGGTGAACGACGAACAATACACGGCCATG GACCCGAAAAAGCTGCCGACGCTGAAGCCGGCGTTTTTGAAGGACGGGGG TGTGGTGACCGCGGGAAATGCTTCGTCGCTCAACGATGGTGCGGCGGCCT TCGTCGTTATGAGTGCGGCTCGGGCTAAGGCGATGGGCGTGACTCCTCTC GCGCGTATTTTGGGGTTTGGGGACGCGGAGCAGGCGCCAGTAGATTTCAC GACGGCGCCGTCCCTGGCTGTGCCGGTGGCGTTGGGGAGGGCTGGGCTGA CGCTCGCGGATGTGGATCTGCATGAGGTGAACGAGGCCTTTGCTGTGGTG GCCCTGGCCAATGCCAAGTTGTTGGGTGTGGAGGAGAGGAGGTTGAATGT GAATGGCGGGGCGGTGGGCTTAGGGCATCCGATTGGCATGAGCGGGGCGA GGATTGTAGGGAGTTTGATGACCGGCTTGAAGCACGGGAGGGAGGGAGGG AAAGAGGGAGGAAGGGTGGGGGTGGCGTCGATTTGTAACGATGCTCCGTC GCGTCGTTGCGCCCCCTGCACGTCGAGCCTTGGCCACCTCGAGCACTCCT CCGGCGGAACGCGACCCGGTCATTGTTTCCTTTGCGCGTACACCCATCGG AAAATTCAATGGGGCGTTGGCTTCGTTGACAGCGCCGCAGCTTGGAAAGG TGGCAATCCAGGCGGCTGTGGCCCGGGCTGGCATCCAGGGGGATGACGTG CAAGAGGTGCTGATGGGAAACGTGGTGAGCGCTGCCATTGGCCAAGCCCC CGCGCGGCAAGCGAGTAAGTTTGCGGGGTTACCCGACAAGACGATTGCAA CGACGATAAATAAAGTGTGCGCCAGCGGGATGAAGGCTTTGATGCTCGGC GCCCAAAGCATCATGTTGGGCCACGCGGACGTGATCGTGGCTGGGGGAAT GGAGTCCATGAGCAACATTCCCTACTATCTTCCCAAGGCCCGCAGCGGCT ACCGCTTAGGGCACGGTCAGTTGGTGGACGGTGTTATCTTTGATGGGTTA TGGGACCCGTATAACAACCAG back to top
|