jgi.p|Nanoce1779_2|624692, gene_1120 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|624692
Unique Namegene_1120
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_2:1276059..1279419 -

Link to JBrowse

Properties
Property NameValue
TranscriptId624778
ProteinId624692
Product nameThiolase, N-terminal domain-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_2supercontigscaffold_2:1276059..1279419 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003985acetyl-CoA C-acetyltransferase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL032ncniL032Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G05300NO02G05300Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|624692mRNA_1120-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|624692mRNA_1120Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|624692

>mRNA_1120-protein ID=mRNA_1120-protein|Name=jgi.p|Nanoce1779_2|624692|organism=Nannochloropsis oceanica|type=polypeptide|length=419bp
MLRRVVAPPARRALATSSTPPAERDPVIVSFARTPIGKFNGALASLTAPQ
LGKVAIQAAVARAGIQGDDVQEVLMGNVVSAAIGQAPARQASKFAGLPDK
TIATTINKVCASGMKALMLGAQSIMLGHADVIVAGGMESMSNIPYYLPKA
RSGYRLGHGQLVDGVIFDGLWDPYNNQHMGLCAEKCARDFSISREAQDAF
ALLSYTRTKASVEGGLFKEEIAPVTIKGRKGEEVVVNDEQYTAMDPKKLP
TLKPAFLKDGGVVTAGNASSLNDGAAAFVVMSAARAKAMGVTPLARILGF
GDAEQAPVDFTTAPSLAVPVALGRAGLTLADVDLHEVNEAFAVVALANAK
LLGVEERRLNVNGGAVGLGHPIGMSGARIVGSLMTGLKHGREGGKEGGRV
GVASICNVDLAASSLMGH*
back to top
Synonyms
Publications