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Properties
| Property Name | Value |
|---|
| TranscriptId | 433177 |
| Track | FilteredModels2 |
| ProteinId | 433091 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_87 | supercontig | scaffold_87:2906..4312 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_11178 ID=mRNA_11178|Name=jgi.p|Nanoce1779_2|433091|organism=Nannochloropsis oceanica|type=mRNA|length=1407bp
CCTCCTCCTCACCGTCCTCACTCCTTCCCCCGTTTCCGACAGAGGGCACG
AGGGAGGGGGAGAGGAAGGAAGCATGTTGGCCTGCCGCGCTCTACCTCAT
GGACGAGCATCGGATCTGGGCTCGATCCGTGCAAGGGAAGGCAAAAGAGA
CGACCCTCCCCCTCCTCACCGCCGTCGCCCGCTGTCTGGATGCCGCCCTC
CCTCCCTCCCTCTACCCTCGATCCCCCCCTCCCTTCCTCCTCCCTACCAC
CCTCCTGCACTCTCTCTATCAGTCTACCGTCTCTTCCTCCTCTTCCTCTT
CCTCCTCCTCCTCTTCCTCTTCCTCCTTCGCTCCCTTGCTCCCTCCCCAT
TGGTCCGCCCGCTACCGTTCATCTCTTGACCTTCATTCCTCCACCCGTCC
TCTAGCCCGTGCCGCCATCCACACGGCCTTGAACGAGATTAAAAAAGGAC
ATGTCACTCTAGCGCCGGAGGGCCTACAGATCATCGTGGGGAGGAGCAGC
CGGGTGGTAAGGGAGGGAGTGAGAGAGGCCTTAAAGGAGGAATGCTCGCC
CCCCTTGGAGGTGGAAGAAGGGGTAGGGGGGAACGAGGGAAGAATGTTGG
TGCCTCTTTCGAGTATCAATGCGTGGTTGAGGTGCGAATGGGAGAGAGAA
AGGGATGCAGGGAGGGAGGGGGGGAGGGAGAAGGCGAGGGTGGATGAGAA
CTATGATGTGACGACCCCGAGAAAGGGGTGGGCGTGGACGGAGGAAGGGA
GGGAGGGAGGGAAGATAAGCGTTTGGAGGGAAGGGGAGGGGGAGGACGAG
GAGGAGGTGGCGGTGGTGGAAGAGGGGGAGGGAAGGAGGCAAGTTGGCGA
GTAGATTGTTATGAGAAAGAGAGGGAGAAAAAAGGAAGGGGTTGAGAGAA
GGAGTCAAAGTAAATGTTCACTTAACAAAGCATTAAACGTGAATGAAATA
TTTATAAATAATGACACAAACGGTGCTCTATCATGTAAGAGAAAGTAGAC
AATGTGAACGGCTTAATGCCTCCCTCGCTCTCTTCGTCCTCCTCCTCCTC
CTCATCTGCCTCTCCTCCTCCTTTGATTCCCGGTGGTAATGTTGTTGCCA
CTGTCGGCACAGATACCTAGGGTATTTCTCGTGGCTTCATCATCGACTGT
GCTGTAACGTGGACATATGGATGTTAGGGTCTATCAGCGCTCCAAGTCCG
AGAAATGCCTCCTGCTCCTTGTTTTAGTGGCGTCATTCCTCCCGGTCAAC
ACATCCTCCCCCCACCTATTCTAGGGCGCTTTCTTGCTTTTCTTATCCTT
TTTTTTGTCGTCATGGAGCTGGTCCTGCTTTTGAGTGGCGCGCGTGGGTG
GCTTTGAGTAGTAGACATGTTCCGAGGTCTCCTCAAGTTCGCTGCGGCTC
GATCGCC back to topprotein sequence of jgi.p|Nanoce1779_2|433091 >mRNA_11178-protein ID=mRNA_11178-protein|Name=jgi.p|Nanoce1779_2|433091|organism=Nannochloropsis oceanica|type=polypeptide|length=252bp
MDEHRIWARSVQGKAKETTLPLLTAVARCLDAALPPSLYPRSPPPFLLPT
TLLHSLYQSTVSSSSSSSSSSSSSSSFAPLLPPHWSARYRSSLDLHSSTR
PLARAAIHTALNEIKKGHVTLAPEGLQIIVGRSSRVVREGVREALKEECS
PPLEVEEGVGGNEGRMLVPLSSINAWLRCEWERERDAGREGGREKARVDE
NYDVTTPRKGWAWTEEGREGGKISVWREGEGEDEEEVAVVEEGEGRRQVG
E* back to topmRNA from alignment at scaffold_87:2906..4312+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_11178 ID=mRNA_11178|Name=jgi.p|Nanoce1779_2|433091|organism=Nannochloropsis oceanica|type=mRNA|length=1407bp|location=Sequence derived from alignment at scaffold_87:2906..4312+ (Nannochloropsis oceanica)
CCTCCTCCTCACCGTCCTCACTCCTTCCCCCGTTTCCGACAGAGGGCACG
AGGGAGGGGGAGAGGAAGGAAGCATGTTGGCCTGCCGCGCTCTACCTCAT
GGACGAGCATCGGATCTGGGCTCGATCCGTGCAAGGGAAGGCAAAAGAGA
CGACCCTCCCCCTCCTCACCGCCGTCGCCCGCTGTCTGGATGCCGCCCTC
CCTCCCTCCCTCTACCCTCGATCCCCCCCTCCCTTCCTCCTCCCTACCAC
CCTCCTGCACTCTCTCTATCAGTCTACCGTCTCTTCCTCCTCTTCCTCTT
CCTCCTCCTCCTCTTCCTCTTCCTCCTTCGCTCCCTTGCTCCCTCCCCAT
TGGTCCGCCCGCTACCGTTCATCTCTTGACCTTCATTCCTCCACCCGTCC
TCTAGCCCGTGCCGCCATCCACACGGCCTTGAACGAGATTAAAAAAGGAC
ATGTCACTCTAGCGCCGGAGGGCCTACAGATCATCGTGGGGAGGAGCAGC
CGGGTGGTAAGGGAGGGAGTGAGAGAGGCCTTAAAGGAGGAATGCTCGCC
CCCCTTGGAGGTGGAAGAAGGGGTAGGGGGGAACGAGGGAAGAATGTTGG
TGCCTCTTTCGAGTATCAATGCGTGGTTGAGGTGCGAATGGGAGAGAGAA
AGGGATGCAGGGAGGGAGGGGGGGAGGGAGAAGGCGAGGGTGGATGAGAA
CTATGATGTGACGACCCCGAGAAAGGGGTGGGCGTGGACGGAGGAAGGGA
GGGAGGGAGGGAAGATAAGCGTTTGGAGGGAAGGGGAGGGGGAGGACGAG
GAGGAGGTGGCGGTGGTGGAAGAGGGGGAGGGAAGGAGGCAAGTTGGCGA
GTAGATTGTTATGAGAAAGAGAGGGAGAAAAAAGGAAGGGGTTGAGAGAA
GGAGTCAAAGTAAATGTTCACTTAACAAAGCATTAAACGTGAATGAAATA
TTTATAAATAATGACACAAACGGTGCTCTATCATGTAAGAGAAAGTAGAC
AATGTGAACGGCTTAATGCCTCCCTCGCTCTCTTCGTCCTCCTCCTCCTC
CTCATCTGCCTCTCCTCCTCCTTTGATTCCCGGTGGTAATGTTGTTGCCA
CTGTCGGCACAGATACCTAGGGTATTTCTCGTGGCTTCATCATCGACTGT
GCTGTAACGTGGACATATGGATGTTAGGGTCTATCAGCGCTCCAAGTCCG
AGAAATGCCTCCTGCTCCTTGTTTTAGTGGCGTCATTCCTCCCGGTCAAC
ACATCCTCCCCCCACCTATTCTAGGGCGCTTTCTTGCTTTTCTTATCCTT
TTTTTTGTCGTCATGGAGCTGGTCCTGCTTTTGAGTGGCGCGCGTGGGTG
GCTTTGAGTAGTAGACATGTTCCGAGGTCTCCTCAAGTTCGCTGCGGCTC
GATCGCC back to topCoding sequence (CDS) from alignment at scaffold_87:2906..4312+ >mRNA_11178 ID=mRNA_11178|Name=jgi.p|Nanoce1779_2|433091|organism=Nannochloropsis oceanica|type=CDS|length=756bp|location=Sequence derived from alignment at scaffold_87:2906..4312+ (Nannochloropsis oceanica)
ATGGACGAGCATCGGATCTGGGCTCGATCCGTGCAAGGGAAGGCAAAAGA
GACGACCCTCCCCCTCCTCACCGCCGTCGCCCGCTGTCTGGATGCCGCCC
TCCCTCCCTCCCTCTACCCTCGATCCCCCCCTCCCTTCCTCCTCCCTACC
ACCCTCCTGCACTCTCTCTATCAGTCTACCGTCTCTTCCTCCTCTTCCTC
TTCCTCCTCCTCCTCTTCCTCTTCCTCCTTCGCTCCCTTGCTCCCTCCCC
ATTGGTCCGCCCGCTACCGTTCATCTCTTGACCTTCATTCCTCCACCCGT
CCTCTAGCCCGTGCCGCCATCCACACGGCCTTGAACGAGATTAAAAAAGG
ACATGTCACTCTAGCGCCGGAGGGCCTACAGATCATCGTGGGGAGGAGCA
GCCGGGTGGTAAGGGAGGGAGTGAGAGAGGCCTTAAAGGAGGAATGCTCG
CCCCCCTTGGAGGTGGAAGAAGGGGTAGGGGGGAACGAGGGAAGAATGTT
GGTGCCTCTTTCGAGTATCAATGCGTGGTTGAGGTGCGAATGGGAGAGAG
AAAGGGATGCAGGGAGGGAGGGGGGGAGGGAGAAGGCGAGGGTGGATGAG
AACTATGATGTGACGACCCCGAGAAAGGGGTGGGCGTGGACGGAGGAAGG
GAGGGAGGGAGGGAAGATAAGCGTTTGGAGGGAAGGGGAGGGGGAGGACG
AGGAGGAGGTGGCGGTGGTGGAAGAGGGGGAGGGAAGGAGGCAAGTTGGC
GAGTAG back to top
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