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Properties
| Property Name | Value |
|---|
| TranscriptId | 613402 |
| Track | FilteredModels2 |
| ProteinId | 613316 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_72 | supercontig | scaffold_72:63017..64527 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10847 ID=mRNA_10847|Name=jgi.p|Nanoce1779_2|613316|organism=Nannochloropsis oceanica|type=mRNA|length=1284bp
ATGGATGACCTTAAGATGGGCGTCTCACCGGAGTGGAATCAAGACTGCCA
AGGATGGACCAAGTATGACATTCGCCTGGTGGCTAGTGATCCCGAGGTAG
AACAGCATATCTTGGATCTCATGGACGGCTTTGTGGAGGATCCTTCTGAC
CTTGAAAGTACGATCCTTGAAAATGCTGACCCTTCCACGGATCTGCAGCC
CTGTGGCATAACCATCAAGGAGAAAGGGGAGCATAGGGTTCCTTCGATGG
AAAAAATGCCTGCCTTTACACAGATGTCATCACTAGGGCCTGATGTGTGG
ATTATGGATGGTGTATCTATCGAGCCCGTGAAATTCCTTTCTGCGGGTGA
AACATACATTGTCTCTGTTCAGAATTTCCCCAGGGGTTCCAAGATCGACT
TGAAGCTTATGGAAGGATTGAAGCTGTCTGGTCCTATTGTGGCGAGCATT
GAATCCTTTGACGATGATGGCGTTTCTGAGGTCCGCTGGACAGTACCCAG
AGACACCCCGATGGACGGGGGCAAGAGGTACTTAAAAGCAGAAATCAGGA
ACGTCCCTGCCTTGTTCTCTTTTTCGCAAGTGTTTTACTTCGAAGACCAG
AATAGTATGTGAGAAGGTAGCCGAAGGAAATCACTCTTGGTACCAGGGGC
TTAGAAATCCAGCATAAATTTTGATCGAAAGACAAAGACTCTGCTTTGAG
AAGATACTTTTATATCTATTAACAATAACTATGCATATGTATTCATTTAG
CAGCCCTCACTTCGCTGGTCGAGGGTGATGAAAGGGATTATCGATTTTGT
CTCCGCTCTAGAGTTCTCAGCCGTAAATAACAACAGTATGAGGATGACCG
ACTCTCTAGAATGGATAGAAATATAGAAATCCTGACGATATTTCATCTCG
CTGAGATACCAAGCACACACAAAATCGTGATTGGAGGATAGAAGGTCGAC
CTGTATGATGGAGATGACCTGAACTGTCTTATTCTTTACCCTAGGCATCC
ACGATCTCCCTCTTTAGACACAAGAGATGAGGTAGGATCTGAGCGGACCA
TGCCTTATGTCGGCGCATCTTAGGCTCGATCACGGTCCTGGTCTATATCC
TGAGAAAAATATTTTATTTCACTGAGGCCTGTATTCTCCTCTACAGACAC
TACATTGTCGTCGACTATATTTATTCGCTCTTAGTGCATGTGTAAGCATA
GGTGCACAACCTATTGACTACATATAAGAACAAATTAATAATAAATAATT
ATGCTCGATATATGTGAAAAGGAAGGATAGAAGC back to topprotein sequence of jgi.p|Nanoce1779_2|613316 >mRNA_10847-protein ID=mRNA_10847-protein|Name=jgi.p|Nanoce1779_2|613316|organism=Nannochloropsis oceanica|type=polypeptide|length=204bp
MDDLKMGVSPEWNQDCQGWTKYDIRLVASDPEVEQHILDLMDGFVEDPSD
LESTILENADPSTDLQPCGITIKEKGEHRVPSMEKMPAFTQMSSLGPDVW
IMDGVSIEPVKFLSAGETYIVSVQNFPRGSKIDLKLMEGLKLSGPIVASI
ESFDDDGVSEVRWTVPRDTPMDGGKRYLKAEIRNVPALFSFSQVFYFEDQ
NSM* back to topmRNA from alignment at scaffold_72:63017..64527- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10847 ID=mRNA_10847|Name=jgi.p|Nanoce1779_2|613316|organism=Nannochloropsis oceanica|type=mRNA|length=1511bp|location=Sequence derived from alignment at scaffold_72:63017..64527- (Nannochloropsis oceanica)
ATGGATGACCTTAAGATGGGCGTCTCACCGGAGTGGAATCAAGACTGCCA
AGGATGGACCAAGTATGACATTCGCCTGGTGGCTAGTGATCCCGAGGTAG
AACAGCATATCTTGGATCTCATGGACGGCTTTGTGGAGGATCCTTCTGAC
CTTGAAAGTACGATCCTTGAAAATGCTGACCCTTCCACGGATCTGCAGCC
CTGTGGCATAACCATCAAGGAGAAAGGGGAGCATAGGGTTCCTTCGATGG
AAAAAATGCCTGCCTTTACACAGATGTCATCACTAGGGCCTGATGTGTGG
ATTATGGATGGTGTATCTATCGAGCCCGTGAAATTCCTTTCTGCGGGTGA
AACATACATTGTCTCTGTTCAGAATTTCCCCAGGGGTTCCAAGATCGACT
TGAAGCTTATGGAAGGATTGAAGCTGTCTGGTCCTATTGTGGCGAGCATT
GAATCCTTTGACGATGATGGCGTTTCTGAGGTCCGCTGGACAGTACCCAG
AGACACCCCGATGGACGGTAAGAATAGCCAAATGGTTTACATGTATATTA
TCCATGTGTTTGTTTTGAGAAAATATAGAAAAACGAGAAAATATAGAAAA
AGAGAGCCACGGAGGGGAAGGGGTGGGGGAGGAAGGATTATTTCGCCAAG
AAATCATGAAATTTTATGCCTCTTCCCCATATTCTTGTTTTTAAACCTCT
CACATCTTTTGATGCCCTTAATCTCTATAATTGCATATTTACAGGGGGCA
AGAGGTACTTAAAAGCAGAAATCAGGAACGTCCCTGCCTTGTTCTCTTTT
TCGCAAGTGTTTTACTTCGAAGACCAGAATAGTATGTGAGAAGGTAGCCG
AAGGAAATCACTCTTGGTACCAGGGGCTTAGAAATCCAGCATAAATTTTG
ATCGAAAGACAAAGACTCTGCTTTGAGAAGATACTTTTATATCTATTAAC
AATAACTATGCATATGTATTCATTTAGCAGCCCTCACTTCGCTGGTCGAG
GGTGATGAAAGGGATTATCGATTTTGTCTCCGCTCTAGAGTTCTCAGCCG
TAAATAACAACAGTATGAGGATGACCGACTCTCTAGAATGGATAGAAATA
TAGAAATCCTGACGATATTTCATCTCGCTGAGATACCAAGCACACACAAA
ATCGTGATTGGAGGATAGAAGGTCGACCTGTATGATGGAGATGACCTGAA
CTGTCTTATTCTTTACCCTAGGCATCCACGATCTCCCTCTTTAGACACAA
GAGATGAGGTAGGATCTGAGCGGACCATGCCTTATGTCGGCGCATCTTAG
GCTCGATCACGGTCCTGGTCTATATCCTGAGAAAAATATTTTATTTCACT
GAGGCCTGTATTCTCCTCTACAGACACTACATTGTCGTCGACTATATTTA
TTCGCTCTTAGTGCATGTGTAAGCATAGGTGCACAACCTATTGACTACAT
ATAAGAACAAATTAATAATAAATAATTATGCTCGATATATGTGAAAAGGA
AGGATAGAAGC back to topCoding sequence (CDS) from alignment at scaffold_72:63017..64527- >mRNA_10847 ID=mRNA_10847|Name=jgi.p|Nanoce1779_2|613316|organism=Nannochloropsis oceanica|type=CDS|length=1224bp|location=Sequence derived from alignment at scaffold_72:63017..64527- (Nannochloropsis oceanica)
GGGGCAAGAGGTACTTAAAAGCAGAAATCAGGAACGTCCCTGCCTTGTTC
TCTTTTTCGCAAGTGTTTTACTTCGAAGACCAGAATAGTATGTGAATGGA
TGACCTTAAGATGGGCGTCTCACCGGAGTGGAATCAAGACTGCCAAGGAT
GGACCAAGTATGACATTCGCCTGGTGGCTAGTGATCCCGAGGTAGAACAG
CATATCTTGGATCTCATGGACGGCTTTGTGGAGGATCCTTCTGACCTTGA
AAGTACGATCCTTGAAAATGCTGACCCTTCCACGGATCTGCAGCCCTGTG
GCATAACCATCAAGGAGAAAGGGGAGCATAGGGTTCCTTCGATGGAAAAA
ATGCCTGCCTTTACACAGATGTCATCACTAGGGCCTGATGTGTGGATTAT
GGATGGTGTATCTATCGAGCCCGTGAAATTCCTTTCTGCGGGTGAAACAT
ACATTGTCTCTGTTCAGAATTTCCCCAGGGGTTCCAAGATCGACTTGAAG
CTTATGGAAGGATTGAAGCTGTCTGGTCCTATTGTGGCGAGCATTGAATC
CTTTGACGATGATGGCGTTTCTGAGGTCCGCTGGACAGTACCCAGAGACA
CCCCGATGGACGGGGGCAAGAGGTACTTAAAAGCAGAAATCAGGAACGTC
CCTGCCTTGTTCTCTTTTTCGCAAGTGTTTTACTTCGAAGACCAGAATAG
TATGTGAATGGATGACCTTAAGATGGGCGTCTCACCGGAGTGGAATCAAG
ACTGCCAAGGATGGACCAAGTATGACATTCGCCTGGTGGCTAGTGATCCC
GAGGTAGAACAGCATATCTTGGATCTCATGGACGGCTTTGTGGAGGATCC
TTCTGACCTTGAAAGTACGATCCTTGAAAATGCTGACCCTTCCACGGATC
TGCAGCCCTGTGGCATAACCATCAAGGAGAAAGGGGAGCATAGGGTTCCT
TCGATGGAAAAAATGCCTGCCTTTACACAGATGTCATCACTAGGGCCTGA
TGTGTGGATTATGGATGGTGTATCTATCGAGCCCGTGAAATTCCTTTCTG
CGGGTGAAACATACATTGTCTCTGTTCAGAATTTCCCCAGGGGTTCCAAG
ATCGACTTGAAGCTTATGGAAGGATTGAAGCTGTCTGGTCCTATTGTGGC
GAGCATTGAATCCTTTGACGATGATGGCGTTTCTGAGGTCCGCTGGACAG
TACCCAGAGACACCCCGATGGACG back to top
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