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Properties
Property Name | Value |
TranscriptId | 613658 |
Track | FilteredModels2 |
ProteinId | 613572 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_76 | supercontig | scaffold_76:27107..28349 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10682 ID=mRNA_10682|Name=jgi.p|Nanoce1779_2|613572|organism=Nannochloropsis oceanica|type=mRNA|length=673bp AACAGACACAGCGAAGGCCCTTCCCACACGCGAGGCCTCATCATCATGCG CGCCCATCTCTCCCTCCTCCTCCTGGCCCTTGTGGCAGCCTTCATCGGCC TGGCTACCGTCACGTCTGCGGCCGACCCCAAGGACTGCGAAGTCTGTATC GGCGTGCTCGAGAAAATCGATGCGGGCCTCGACGCCAAGGCCAAGAAGAA CAAGCTCGCCATCGAGGAAGCCATTGAGACCTACTGCACCCGCAAAGACA TCGACAACAAGGAGAAGAAACTCTGTTATTTCCTCAAGCCCATCAAGAGG GATGTGTCTCAGCCGTTTTCGACGGGCATGCCCAAGGCCAAGGTCTGCGA GCGGCTCAAAAAGAAGAGTGCCGAGATCTGCACGATCAAGTATCCCGTCA AGGTAGACAGCCAGACGGACTACAGCAAGCTTCGTGTCAAGGAGCTGAAG GCTATCCTATCTGAGCGAGGGGTAGAGTGCACGGGGTGTCTGGAAAAGCC AGACTTCATTAAGAAGTGTGAGGAGACTGCGCATTTGTCTGCTGAGCTCT AAAGAAAGAGGAAAGGACGGGAGGAAAGGGCGTAGGGAGGGAGATAAAGC AACAATGCTGTGTGGAGAGTGCCAGAGCGATGGTAAGGCGCTGCATGTCT CCTTCAAAGAGTTGCGATTTTGT back to topprotein sequence of jgi.p|Nanoce1779_2|613572 >mRNA_10682-protein ID=mRNA_10682-protein|Name=jgi.p|Nanoce1779_2|613572|organism=Nannochloropsis oceanica|type=polypeptide|length=169bp MRAHLSLLLLALVAAFIGLATVTSAADPKDCEVCIGVLEKIDAGLDAKAK KNKLAIEEAIETYCTRKDIDNKEKKLCYFLKPIKRDVSQPFSTGMPKAKV CERLKKKSAEICTIKYPVKVDSQTDYSKLRVKELKAILSERGVECTGCLE KPDFIKKCEETAHLSAEL* back to topmRNA from alignment at scaffold_76:27107..28349- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10682 ID=mRNA_10682|Name=jgi.p|Nanoce1779_2|613572|organism=Nannochloropsis oceanica|type=mRNA|length=1243bp|location=Sequence derived from alignment at scaffold_76:27107..28349- (Nannochloropsis oceanica) AACAGACACAGCGAAGGCCCTTCCCACACGCGAGGCCTCATCATCATGCG
CGCCCATCTCTCCCTCCTCCTCCTGGCCCTTGTGGCAGCCTTCATCGGCC
TGGCTACCGTCACGTCTGCGGCCGACCCCAAGGACTGCGAAGGTAAGGAG
ACGTGTGAAATAGCTGATCCAATGCATGGTTGGTATTCTTGGAGGATCAA
GGACCTGTTGGGCGTTTTTGAAATCAGGAGCGTGCGCTTCCCTACTTCCA
GAAAAGTGGCGGGGAAGAGGAGTCCTGTTACATTTTACATCGACACACAA
ACCACCAGTCGAATCATTCAGAGGCATTTTCTTGTCGTCGGGAAAGAGGC
TTTGACAACACTTGCTCCCACCCAGCTTTTCACACTTTTTCACCAGCAGC
CCTCTGATCGTGTACCAAGGAGAGCGATCATTTCCCCCAGACCCTCATAT
ACACGACACTTTCCCCTACCTCTATTAGGCATTGCGAATTGAGGGTTTTG
ACCAAGAGTTTAACTGTCACCACCATCCGCTTTCTTGCCCTAAACCCCTC
TCTCCCCCCTCTCCCTCCATGCCCATAGTCTGTATCGGCGTGCTCGAGAA
AATCGATGCGGGCCTCGACGCCAAGGCCAAGAAGAACAAGCTCGCCATCG
AGGAAGCCATTGAGACCTACTGCACCCGCAAAGACATCGACAACAAGGAG
AAGAAACTCTGTTATTTCCTCAAGCCCATCAAGAGGGATGTGTCTCAGCC
GTTTTCGACGGGCATGCCCAAGGCCAAGGTCTGCGAGCGGCTCAAAAAGA
AGAGTGCCGAGATCTGCACGATCAAGTATCGTAAGTACTCAAAGAGAGGG
AAGGAGACAGGAAGGGTCAGCATATTGTTATGGATGCTTGTAGAGCTAAC
AAAAAATAATGATGCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCTCTCC
CCCTCCCCCTTCAGCCGTCAAGGTAGACAGCCAGACGGACTACAGCAAGC
TTCGTGTCAAGGAGCTGAAGGCTATCCTATCTGAGCGAGGGGTAGAGTGC
ACGGGGTGTCTGGAAAAGCCAGACTTCATTAAGAAGTGTGAGGAGACTGC
GCATTTGTCTGCTGAGCTCTAAAGAAAGAGGAAAGGACGGGAGGAAAGGG
CGTAGGGAGGGAGATAAAGCAACAATGCTGTGTGGAGAGTGCCAGAGCGA
TGGTAAGGCGCTGCATGTCTCCTTCAAAGAGTTGCGATTTTGT back to topCoding sequence (CDS) from alignment at scaffold_76:27107..28349- >mRNA_10682 ID=mRNA_10682|Name=jgi.p|Nanoce1779_2|613572|organism=Nannochloropsis oceanica|type=CDS|length=1521bp|location=Sequence derived from alignment at scaffold_76:27107..28349- (Nannochloropsis oceanica) CCGTCAAGGTAGACAGCCAGACGGACTACAGCAAGCTTCGTGTCAAGGAG CTGAAGGCTATCCTATCTGAGCGAGGGGTAGAGTGCACGGGGTGTCTGGA AAAGCCAGACTTCATTAAGAAGTGTGAGGAGACTGCGCATTTGTCTGCTG AGCTCTAATCTGTATCGGCGTGCTCGAGAAAATCGATGCGGGCCTCGACG CCAAGGCCAAGAAGAACAAGCTCGCCATCGAGGAAGCCATTGAGACCTAC TGCACCCGCAAAGACATCGACAACAAGGAGAAGAAACTCTGTTATTTCCT CAAGCCCATCAAGAGGGATGTGTCTCAGCCGTTTTCGACGGGCATGCCCA AGGCCAAGGTCTGCGAGCGGCTCAAAAAGAAGAGTGCCGAGATCTGCACG ATCAAGTATCATGCGCGCCCATCTCTCCCTCCTCCTCCTGGCCCTTGTGG CAGCCTTCATCGGCCTGGCTACCGTCACGTCTGCGGCCGACCCCAAGGAC TGCGAAGCCGTCAAGGTAGACAGCCAGACGGACTACAGCAAGCTTCGTGT CAAGGAGCTGAAGGCTATCCTATCTGAGCGAGGGGTAGAGTGCACGGGGT GTCTGGAAAAGCCAGACTTCATTAAGAAGTGTGAGGAGACTGCGCATTTG TCTGCTGAGCTCTAATCTGTATCGGCGTGCTCGAGAAAATCGATGCGGGC CTCGACGCCAAGGCCAAGAAGAACAAGCTCGCCATCGAGGAAGCCATTGA GACCTACTGCACCCGCAAAGACATCGACAACAAGGAGAAGAAACTCTGTT ATTTCCTCAAGCCCATCAAGAGGGATGTGTCTCAGCCGTTTTCGACGGGC ATGCCCAAGGCCAAGGTCTGCGAGCGGCTCAAAAAGAAGAGTGCCGAGAT CTGCACGATCAAGTATCATGCGCGCCCATCTCTCCCTCCTCCTCCTGGCC CTTGTGGCAGCCTTCATCGGCCTGGCTACCGTCACGTCTGCGGCCGACCC CAAGGACTGCGAAGCCGTCAAGGTAGACAGCCAGACGGACTACAGCAAGC TTCGTGTCAAGGAGCTGAAGGCTATCCTATCTGAGCGAGGGGTAGAGTGC ACGGGGTGTCTGGAAAAGCCAGACTTCATTAAGAAGTGTGAGGAGACTGC GCATTTGTCTGCTGAGCTCTAATCTGTATCGGCGTGCTCGAGAAAATCGA TGCGGGCCTCGACGCCAAGGCCAAGAAGAACAAGCTCGCCATCGAGGAAG CCATTGAGACCTACTGCACCCGCAAAGACATCGACAACAAGGAGAAGAAA CTCTGTTATTTCCTCAAGCCCATCAAGAGGGATGTGTCTCAGCCGTTTTC GACGGGCATGCCCAAGGCCAAGGTCTGCGAGCGGCTCAAAAAGAAGAGTG CCGAGATCTGCACGATCAAGTATCATGCGCGCCCATCTCTCCCTCCTCCT CCTGGCCCTTGTGGCAGCCTTCATCGGCCTGGCTACCGTCACGTCTGCGG CCGACCCCAAGGACTGCGAAG back to top
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