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Properties
Property Name | Value |
TranscriptId | 410421 |
Track | FilteredModels2 |
ProteinId | 410335 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_76 | supercontig | scaffold_76:4617..7004 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10670 ID=mRNA_10670|Name=jgi.p|Nanoce1779_2|410335|organism=Nannochloropsis oceanica|type=mRNA|length=2011bp GAGGTCGAGAGTATTGAACGCGAGCGACCGTTGATGGTATGATGATTGCT TCACTATGCGAAGCAATGCAAACAACTAATAACACCACGATGTACGCTGC ATGCACAGGGCCGGAGAGCAAGCAGCGGTATTGCGTTGTTTTATGTCTCG CACCGGGAAGGAATGTTACTATGCTGTGTTGGGAGTGGAGAGGAGTGCCA CGGACGCGGAGATCAAGCTCGCTTACAGAAAGCTTGCCCTCAAGCATCAT CCGGATAAGAATGTAGGCGACGAGGGGGCAACAGCAATTTTTCAACGCCT CCAAGAGGCAAACTCCGTACTGAGTGACAAGCGGGAGCGGGCTTGGTATG ATTCACATCGAGATCAGATACTCAGGGGGGACGACTATGATGATGATGAC GAGGGGGAGGAGAGAAGTGGAGGGAGAGGAAGCGGAAGACGAGGAGGAGT CGGAGGAGCAAAACGGGGCAAGGGTGCATATGTCGTGAATGTCTGGCCTT TTTTCAGCAGTTCGGCTTTTAGCGGGTATGGGGAGGGAGAGGGGGGTTTC TATGCAGTCTACAGAGAATTGTTTGTAAAGATTGATGTCCACGAGAGGGA AAAAGGAATACCCTCACCGCCAATCGCACGAGGAGGAGGAGCAGCAGGAG GGGAGGGAGAGGCACCTGGCTTTGGTGGGCCGGAGACGGGGTGGGGGGGG GTAGCTGCGTTTTATGGGTATTGGGGTGATTTCTGCTCGAGACTGTCGTT TGGATGGGCGGACGAGTACAGGGAGCAAGATGCCCCCTCGAGGCAAGTGA GGCGGGCGATGGAGAAGGAGAATAAGAAAAGCAGGGAGGCTGCGCGGAAA AAGTACCAGGAGGCGATCCGGGCGCTGGTGGAGTTTGTGAAGAAGAGGGA CAAGCGCGTGATGCAGCGGCAGGTCGAGGTAGGGAGGGAGGAAGCGGCAC GGGTGGCGACGGAGGCGAAGGGGGCCAAGTTGAAAGCAGAGGAATTTAAG AAGGAGAAGGAGAGATGGCTGAGGGAGCAGATGCAGCAGTGGGAGGAGGA GGAGTCGGCGAGGAGAGAGGAGGAGGGGATAGGAGGATCGGCTGAATTTC GGTTGGCGGATGAGGACGAGGACAGTAGTAGTAGCAGTGATAGGGAGGAC GGGGGGGAGGAAGGGAGCAGTAGGAGGTGGAAGCCAAGGCGGGGAAAGAA GAAGAAGAATGCTGGGGTGTTCGAGTGTGTGGTGTGCGATAAGAAGTTTA AGAGTGAGAAGCAGCTGAACAATCATAAGCAAAGCCGGACACACAAAAGG ATGGTTGAGGAGCTGCAGGCGGAATTCGGAGATCTGGAAGGATTAAATGA GGAGGACGAGGAAAGGGAGGAGGAAGTGGAAGAGGGGAAAAAAGGGTCGA TGTTTGAGTGTGTGGTGTGTGCGAAGGTGTTTTTGTCAGAGAAACAGCTG AAAACCCATAAGCAGAGTCGCACGCATGGGAAGATGGTGGAGCAGCTGCA AGCGGAGTCGGAGGACTTGGAAGGGTTAAAGGAGAGTGAAGAAGGACAGG AGGAAGAAGAGGAGGAGGAGGAGGGGCTTGTGAGTGGCGAAATCGTTGCT GAAGACGGAAAAGGAGCGAAGGGATTGAGGGACGAGCGGGATGGGGAGGG AGTAGAGAAGGAAGATGGAAGCGAGGACTACGCCAAGGATGGCGTGCAGG ACGAAGAGAAGGAGGAAGAAGAGGATGAGAAAGAGGATGAAGAGGGAGAG GAAAGCAGCAGTGACGATGGCGTGGAGCACGCAGCGCGTCAAGTGAATCG ATTTGCCTTGGTCGATGATTCATCATCGGAGGAGGATTAGGGTGGTCATG CAAACATGTGTGTAAGTGATGCTCTCTTTGGGGGAATAGCATGTCTACAG GCATTTGAATCAGGGAATGGGTGAAAGAGCTTTAGCCTTCTCGAGAAGCC AAGCTGGTTGTAAAATTGTACGCACACACATGAAGTGAAAATAAATATTT TATAGAGGTTG back to topprotein sequence of jgi.p|Nanoce1779_2|410335 >mRNA_10670-protein ID=mRNA_10670-protein|Name=jgi.p|Nanoce1779_2|410335|organism=Nannochloropsis oceanica|type=polypeptide|length=580bp MHRAGEQAAVLRCFMSRTGKECYYAVLGVERSATDAEIKLAYRKLALKHH PDKNVGDEGATAIFQRLQEANSVLSDKRERAWYDSHRDQILRGDDYDDDD EGEERSGGRGSGRRGGVGGAKRGKGAYVVNVWPFFSSSAFSGYGEGEGGF YAVYRELFVKIDVHEREKGIPSPPIARGGGAAGGEGEAPGFGGPETGWGG VAAFYGYWGDFCSRLSFGWADEYREQDAPSRQVRRAMEKENKKSREAARK KYQEAIRALVEFVKKRDKRVMQRQVEVGREEAARVATEAKGAKLKAEEFK KEKERWLREQMQQWEEEESARREEEGIGGSAEFRLADEDEDSSSSSDRED GGEEGSSRRWKPRRGKKKKNAGVFECVVCDKKFKSEKQLNNHKQSRTHKR MVEELQAEFGDLEGLNEEDEEREEEVEEGKKGSMFECVVCAKVFLSEKQL KTHKQSRTHGKMVEQLQAESEDLEGLKESEEGQEEEEEEEEGLVSGEIVA EDGKGAKGLRDERDGEGVEKEDGSEDYAKDGVQDEEKEEEEDEKEDEEGE ESSSDDGVEHAARQVNRFALVDDSSSEED* back to topmRNA from alignment at scaffold_76:4617..7004- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10670 ID=mRNA_10670|Name=jgi.p|Nanoce1779_2|410335|organism=Nannochloropsis oceanica|type=mRNA|length=2388bp|location=Sequence derived from alignment at scaffold_76:4617..7004- (Nannochloropsis oceanica) GAGGTCGAGAGTATTGAACGCGAGCGACCGTTGATGGTATGATGATTGCT
TCACTATGCGAAGCAATGCAAACAACTAATAACACCACGATGTACGCTGC
ATGCACAGGGCCGGAGAGCAAGCAGCGGTATTGCGTTGTTTTATGTCTCG
CACCGGGAAGGAATGTTACTATGCTGTGTTGGGAGTGGAGAGGTAAGGGC
AAGATGGGATGGGATGCAGGGGACGTAAGCTGCTCTGGTACTTGACGCTG
CGGCGACAGTATTTATGATAGAGCACTAATGCTGCCATAGCAATAAGAAA
GATTGGATGACACCCAAAGTAGTCGCGAGGGCGTGCCCAGACCGTAAGGT
GTGTTTAGTTTATCTCGATCCTCCGCACGATCCCATCCTACCCTATGCGA
CTCCCACAACACTGACCCTGAACAGGAGTGCCACGGACGCGGAGATCAAG
CTCGCTTACAGAAAGGTGCGTTGCTTTTCATTCCACATGCGCCTTTCCTC
CGCCCAGTCTGCCTCACCGCAGCTGCAACTAAATCTGACACACATTCCCT
TCCTCCCTCCCTCCCCCTACCTTCCTCCCTCCCCCCTACCGTCCCTCGCT
CTCCCGCAGCTTGCCCTCAAGCATCATCCGGATAAGAATGTAGGCGACGA
GGGGGCAACAGCAATTTTTCAACGCCTCCAAGAGGCAAACTCCGTACTGA
GTGACAAGCGGGAGCGGGCTTGGTATGATTCACATCGAGATCAGATACTC
AGGGGGGACGACTATGATGATGATGACGAGGGGGAGGAGAGAAGTGGAGG
GAGAGGAAGCGGAAGACGAGGAGGAGTCGGAGGAGCAAAACGGGGCAAGG
GTGCATATGTCGTGAATGTCTGGCCTTTTTTCAGCAGTTCGGCTTTTAGC
GGGTATGGGGAGGGAGAGGGGGGTTTCTATGCAGTCTACAGAGAATTGTT
TGTAAAGATTGATGTCCACGAGAGGGAAAAAGGAATACCCTCACCGCCAA
TCGCACGAGGAGGAGGAGCAGCAGGAGGGGAGGGAGAGGCACCTGGCTTT
GGTGGGCCGGAGACGGGGTGGGGGGGGGTAGCTGCGTTTTATGGGTATTG
GGGTGATTTCTGCTCGAGACTGTCGTTTGGATGGGCGGACGAGTACAGGG
AGCAAGATGCCCCCTCGAGGCAAGTGAGGCGGGCGATGGAGAAGGAGAAT
AAGAAAAGCAGGGAGGCTGCGCGGAAAAAGTACCAGGAGGCGATCCGGGC
GCTGGTGGAGTTTGTGAAGAAGAGGGACAAGCGCGTGATGCAGCGGCAGG
TCGAGGTAGGGAGGGAGGAAGCGGCACGGGTGGCGACGGAGGCGAAGGGG
GCCAAGTTGAAAGCAGAGGAATTTAAGAAGGAGAAGGAGAGATGGCTGAG
GGAGCAGATGCAGCAGTGGGAGGAGGAGGAGTCGGCGAGGAGAGAGGAGG
AGGGGATAGGAGGATCGGCTGAATTTCGGTTGGCGGATGAGGACGAGGAC
AGTAGTAGTAGCAGTGATAGGGAGGACGGGGGGGAGGAAGGGAGCAGTAG
GAGGTGGAAGCCAAGGCGGGGAAAGAAGAAGAAGAATGCTGGGGTGTTCG
AGTGTGTGGTGTGCGATAAGAAGTTTAAGAGTGAGAAGCAGCTGAACAAT
CATAAGCAAAGCCGGACACACAAAAGGATGGTTGAGGAGCTGCAGGCGGA
ATTCGGAGATCTGGAAGGATTAAATGAGGAGGACGAGGAAAGGGAGGAGG
AAGTGGAAGAGGGGAAAAAAGGGTCGATGTTTGAGTGTGTGGTGTGTGCG
AAGGTGTTTTTGTCAGAGAAACAGCTGAAAACCCATAAGCAGAGTCGCAC
GCATGGGAAGATGGTGGAGCAGCTGCAAGCGGAGTCGGAGGACTTGGAAG
GGTTAAAGGAGAGTGAAGAAGGACAGGAGGAAGAAGAGGAGGAGGAGGAG
GGGCTTGTGAGTGGCGAAATCGTTGCTGAAGACGGAAAAGGAGCGAAGGG
ATTGAGGGACGAGCGGGATGGGGAGGGAGTAGAGAAGGAAGATGGAAGCG
AGGACTACGCCAAGGATGGCGTGCAGGACGAAGAGAAGGAGGAAGAAGAG
GATGAGAAAGAGGATGAAGAGGGAGAGGAAAGCAGCAGTGACGATGGCGT
GGAGCACGCAGCGCGTCAAGTGAATCGATTTGCCTTGGTCGATGATTCAT
CATCGGAGGAGGATTAGGGTGGTCATGCAAACATGTGTGTAAGTGATGCT
CTCTTTGGGGGAATAGCATGTCTACAGGCATTTGAATCAGGGAATGGGTG
AAAGAGCTTTAGCCTTCTCGAGAAGCCAAGCTGGTTGTAAAATTGTACGC
ACACACATGAAGTGAAAATAAATATTTTATAGAGGTTG back to topCoding sequence (CDS) from alignment at scaffold_76:4617..7004- >mRNA_10670 ID=mRNA_10670|Name=jgi.p|Nanoce1779_2|410335|organism=Nannochloropsis oceanica|type=CDS|length=5220bp|location=Sequence derived from alignment at scaffold_76:4617..7004- (Nannochloropsis oceanica) CTTGCCCTCAAGCATCATCCGGATAAGAATGTAGGCGACGAGGGGGCAAC AGCAATTTTTCAACGCCTCCAAGAGGCAAACTCCGTACTGAGTGACAAGC GGGAGCGGGCTTGGTATGATTCACATCGAGATCAGATACTCAGGGGGGAC GACTATGATGATGATGACGAGGGGGAGGAGAGAAGTGGAGGGAGAGGAAG CGGAAGACGAGGAGGAGTCGGAGGAGCAAAACGGGGCAAGGGTGCATATG TCGTGAATGTCTGGCCTTTTTTCAGCAGTTCGGCTTTTAGCGGGTATGGG GAGGGAGAGGGGGGTTTCTATGCAGTCTACAGAGAATTGTTTGTAAAGAT TGATGTCCACGAGAGGGAAAAAGGAATACCCTCACCGCCAATCGCACGAG GAGGAGGAGCAGCAGGAGGGGAGGGAGAGGCACCTGGCTTTGGTGGGCCG GAGACGGGGTGGGGGGGGGTAGCTGCGTTTTATGGGTATTGGGGTGATTT CTGCTCGAGACTGTCGTTTGGATGGGCGGACGAGTACAGGGAGCAAGATG CCCCCTCGAGGCAAGTGAGGCGGGCGATGGAGAAGGAGAATAAGAAAAGC AGGGAGGCTGCGCGGAAAAAGTACCAGGAGGCGATCCGGGCGCTGGTGGA GTTTGTGAAGAAGAGGGACAAGCGCGTGATGCAGCGGCAGGTCGAGGTAG GGAGGGAGGAAGCGGCACGGGTGGCGACGGAGGCGAAGGGGGCCAAGTTG AAAGCAGAGGAATTTAAGAAGGAGAAGGAGAGATGGCTGAGGGAGCAGAT GCAGCAGTGGGAGGAGGAGGAGTCGGCGAGGAGAGAGGAGGAGGGGATAG GAGGATCGGCTGAATTTCGGTTGGCGGATGAGGACGAGGACAGTAGTAGT AGCAGTGATAGGGAGGACGGGGGGGAGGAAGGGAGCAGTAGGAGGTGGAA GCCAAGGCGGGGAAAGAAGAAGAAGAATGCTGGGGTGTTCGAGTGTGTGG TGTGCGATAAGAAGTTTAAGAGTGAGAAGCAGCTGAACAATCATAAGCAA AGCCGGACACACAAAAGGATGGTTGAGGAGCTGCAGGCGGAATTCGGAGA TCTGGAAGGATTAAATGAGGAGGACGAGGAAAGGGAGGAGGAAGTGGAAG AGGGGAAAAAAGGGTCGATGTTTGAGTGTGTGGTGTGTGCGAAGGTGTTT TTGTCAGAGAAACAGCTGAAAACCCATAAGCAGAGTCGCACGCATGGGAA GATGGTGGAGCAGCTGCAAGCGGAGTCGGAGGACTTGGAAGGGTTAAAGG AGAGTGAAGAAGGACAGGAGGAAGAAGAGGAGGAGGAGGAGGGGCTTGTG AGTGGCGAAATCGTTGCTGAAGACGGAAAAGGAGCGAAGGGATTGAGGGA CGAGCGGGATGGGGAGGGAGTAGAGAAGGAAGATGGAAGCGAGGACTACG CCAAGGATGGCGTGCAGGACGAAGAGAAGGAGGAAGAAGAGGATGAGAAA GAGGATGAAGAGGGAGAGGAAAGCAGCAGTGACGATGGCGTGGAGCACGC AGCGCGTCAAGTGAATCGATTTGCCTTGGTCGATGATTCATCATCGGAGG AGGATTAGGAGTGCCACGGACGCGGAGATCAAGCTCGCTTACAGAAAGAT GCACAGGGCCGGAGAGCAAGCAGCGGTATTGCGTTGTTTTATGTCTCGCA CCGGGAAGGAATGTTACTATGCTGTGTTGGGAGTGGAGAGCTTGCCCTCA AGCATCATCCGGATAAGAATGTAGGCGACGAGGGGGCAACAGCAATTTTT CAACGCCTCCAAGAGGCAAACTCCGTACTGAGTGACAAGCGGGAGCGGGC TTGGTATGATTCACATCGAGATCAGATACTCAGGGGGGACGACTATGATG ATGATGACGAGGGGGAGGAGAGAAGTGGAGGGAGAGGAAGCGGAAGACGA GGAGGAGTCGGAGGAGCAAAACGGGGCAAGGGTGCATATGTCGTGAATGT CTGGCCTTTTTTCAGCAGTTCGGCTTTTAGCGGGTATGGGGAGGGAGAGG GGGGTTTCTATGCAGTCTACAGAGAATTGTTTGTAAAGATTGATGTCCAC GAGAGGGAAAAAGGAATACCCTCACCGCCAATCGCACGAGGAGGAGGAGC AGCAGGAGGGGAGGGAGAGGCACCTGGCTTTGGTGGGCCGGAGACGGGGT GGGGGGGGGTAGCTGCGTTTTATGGGTATTGGGGTGATTTCTGCTCGAGA CTGTCGTTTGGATGGGCGGACGAGTACAGGGAGCAAGATGCCCCCTCGAG GCAAGTGAGGCGGGCGATGGAGAAGGAGAATAAGAAAAGCAGGGAGGCTG CGCGGAAAAAGTACCAGGAGGCGATCCGGGCGCTGGTGGAGTTTGTGAAG AAGAGGGACAAGCGCGTGATGCAGCGGCAGGTCGAGGTAGGGAGGGAGGA AGCGGCACGGGTGGCGACGGAGGCGAAGGGGGCCAAGTTGAAAGCAGAGG AATTTAAGAAGGAGAAGGAGAGATGGCTGAGGGAGCAGATGCAGCAGTGG GAGGAGGAGGAGTCGGCGAGGAGAGAGGAGGAGGGGATAGGAGGATCGGC TGAATTTCGGTTGGCGGATGAGGACGAGGACAGTAGTAGTAGCAGTGATA GGGAGGACGGGGGGGAGGAAGGGAGCAGTAGGAGGTGGAAGCCAAGGCGG GGAAAGAAGAAGAAGAATGCTGGGGTGTTCGAGTGTGTGGTGTGCGATAA GAAGTTTAAGAGTGAGAAGCAGCTGAACAATCATAAGCAAAGCCGGACAC ACAAAAGGATGGTTGAGGAGCTGCAGGCGGAATTCGGAGATCTGGAAGGA TTAAATGAGGAGGACGAGGAAAGGGAGGAGGAAGTGGAAGAGGGGAAAAA AGGGTCGATGTTTGAGTGTGTGGTGTGTGCGAAGGTGTTTTTGTCAGAGA AACAGCTGAAAACCCATAAGCAGAGTCGCACGCATGGGAAGATGGTGGAG CAGCTGCAAGCGGAGTCGGAGGACTTGGAAGGGTTAAAGGAGAGTGAAGA AGGACAGGAGGAAGAAGAGGAGGAGGAGGAGGGGCTTGTGAGTGGCGAAA TCGTTGCTGAAGACGGAAAAGGAGCGAAGGGATTGAGGGACGAGCGGGAT GGGGAGGGAGTAGAGAAGGAAGATGGAAGCGAGGACTACGCCAAGGATGG CGTGCAGGACGAAGAGAAGGAGGAAGAAGAGGATGAGAAAGAGGATGAAG AGGGAGAGGAAAGCAGCAGTGACGATGGCGTGGAGCACGCAGCGCGTCAA GTGAATCGATTTGCCTTGGTCGATGATTCATCATCGGAGGAGGATTAGGA GTGCCACGGACGCGGAGATCAAGCTCGCTTACAGAAAGATGCACAGGGCC GGAGAGCAAGCAGCGGTATTGCGTTGTTTTATGTCTCGCACCGGGAAGGA ATGTTACTATGCTGTGTTGGGAGTGGAGAGCTTGCCCTCAAGCATCATCC GGATAAGAATGTAGGCGACGAGGGGGCAACAGCAATTTTTCAACGCCTCC AAGAGGCAAACTCCGTACTGAGTGACAAGCGGGAGCGGGCTTGGTATGAT TCACATCGAGATCAGATACTCAGGGGGGACGACTATGATGATGATGACGA GGGGGAGGAGAGAAGTGGAGGGAGAGGAAGCGGAAGACGAGGAGGAGTCG GAGGAGCAAAACGGGGCAAGGGTGCATATGTCGTGAATGTCTGGCCTTTT TTCAGCAGTTCGGCTTTTAGCGGGTATGGGGAGGGAGAGGGGGGTTTCTA TGCAGTCTACAGAGAATTGTTTGTAAAGATTGATGTCCACGAGAGGGAAA AAGGAATACCCTCACCGCCAATCGCACGAGGAGGAGGAGCAGCAGGAGGG GAGGGAGAGGCACCTGGCTTTGGTGGGCCGGAGACGGGGTGGGGGGGGGT AGCTGCGTTTTATGGGTATTGGGGTGATTTCTGCTCGAGACTGTCGTTTG GATGGGCGGACGAGTACAGGGAGCAAGATGCCCCCTCGAGGCAAGTGAGG CGGGCGATGGAGAAGGAGAATAAGAAAAGCAGGGAGGCTGCGCGGAAAAA GTACCAGGAGGCGATCCGGGCGCTGGTGGAGTTTGTGAAGAAGAGGGACA AGCGCGTGATGCAGCGGCAGGTCGAGGTAGGGAGGGAGGAAGCGGCACGG GTGGCGACGGAGGCGAAGGGGGCCAAGTTGAAAGCAGAGGAATTTAAGAA GGAGAAGGAGAGATGGCTGAGGGAGCAGATGCAGCAGTGGGAGGAGGAGG AGTCGGCGAGGAGAGAGGAGGAGGGGATAGGAGGATCGGCTGAATTTCGG TTGGCGGATGAGGACGAGGACAGTAGTAGTAGCAGTGATAGGGAGGACGG GGGGGAGGAAGGGAGCAGTAGGAGGTGGAAGCCAAGGCGGGGAAAGAAGA AGAAGAATGCTGGGGTGTTCGAGTGTGTGGTGTGCGATAAGAAGTTTAAG AGTGAGAAGCAGCTGAACAATCATAAGCAAAGCCGGACACACAAAAGGAT GGTTGAGGAGCTGCAGGCGGAATTCGGAGATCTGGAAGGATTAAATGAGG AGGACGAGGAAAGGGAGGAGGAAGTGGAAGAGGGGAAAAAAGGGTCGATG TTTGAGTGTGTGGTGTGTGCGAAGGTGTTTTTGTCAGAGAAACAGCTGAA AACCCATAAGCAGAGTCGCACGCATGGGAAGATGGTGGAGCAGCTGCAAG CGGAGTCGGAGGACTTGGAAGGGTTAAAGGAGAGTGAAGAAGGACAGGAG GAAGAAGAGGAGGAGGAGGAGGGGCTTGTGAGTGGCGAAATCGTTGCTGA AGACGGAAAAGGAGCGAAGGGATTGAGGGACGAGCGGGATGGGGAGGGAG TAGAGAAGGAAGATGGAAGCGAGGACTACGCCAAGGATGGCGTGCAGGAC GAAGAGAAGGAGGAAGAAGAGGATGAGAAAGAGGATGAAGAGGGAGAGGA AAGCAGCAGTGACGATGGCGTGGAGCACGCAGCGCGTCAAGTGAATCGAT TTGCCTTGGTCGATGATTCATCATCGGAGGAGGATTAGGAGTGCCACGGA CGCGGAGATCAAGCTCGCTTACAGAAAGATGCACAGGGCCGGAGAGCAAG CAGCGGTATTGCGTTGTTTTATGTCTCGCACCGGGAAGGAATGTTACTAT GCTGTGTTGGGAGTGGAGAG back to top
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