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Properties
Property Name | Value |
TranscriptId | 379384 |
Track | FilteredModels2 |
ProteinId | 379298 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_62 | supercontig | scaffold_62:1042..3435 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10606 ID=mRNA_10606|Name=jgi.p|Nanoce1779_2|379298|organism=Nannochloropsis oceanica|type=mRNA|length=980bp GGCTGCCTACGCTTGGCATTTCCAAGCCGCCTACGTTCTGCATCTCAACG ACTCCCTCGACGAGGGGCTGGAGGCCGGCGATCTCTCCATCCTCAAAGAC GTCCACGGCACTATGGCAGGCCTCAAGGCATTCGGGACATGGCATACTTA CCATGCCATCGAGGCTTGCAGGACTTCGCGGTGATGTGCACATGGGAGGG CGACAACACGGTCATGGCTCTCCAAACAGCCCGCTATCTCGTCCGGTCCT ATGTCAAGGCCAAGCAGGGAGGAGAAACCCTGGCCGGCTCTGTCTCCTAC CTCCAAGCCTCCCATCCCCCCGCCTGGCGCGCACGCACCGCGCACGACCT GCTCGACATGGACGTGCAACAAGAGGCGTGGCGCGCCCTCTTGGCTGCCA AGGTCTCGGCGGCGGCCGAGCGAGTGCTGGCACGACAAACAGCACTGGCC GGAAATGAAGCGCAGGCCTTCACTGACAATCAAGTTGAGCTCTTCCATTG CGCCAAGACGCACGTGTACTACAACGTGGCCGCCCGCTTCATGGAGGCCG TAGTGGAGGCCGAAGCCACCCATCCAGCCCTTGCTCCCCTCCTTGCCCGT CTCTCGCACCTCTTTTCCCTCTCGAATCTTCTAGAAGAAAGCTCGGGCCT TCTAGAAAGTGGCTTTGCCATGCCTGGGCAACTGCAGCTGGCGCGGGAGG CCGTGTCCTCCCTCCTCCTCGCCCTCCGCCCCGACGCCGTCCCTCTGGTA GATGCCTTCAACTACTCCGATGCCGTCCTCGGCTCTTACCTCGGCACGGC CAGCGGCGACATCTACACCGGCTACCTTCACCAAGTGCAACGGCTCGTGC CGGAGAACAAGGTCTCCGTCGCTCCCTACATCCTCACTCAGGTGAAGCCC CTGATGCAAGGCGCGGACCTCATCTCCACTGATGAAGACGAGGAGTAGAA GGAGGGATGGAGGGAGGGGGGGAAGATAAC back to topprotein sequence of jgi.p|Nanoce1779_2|379298 >mRNA_10606-protein ID=mRNA_10606-protein|Name=jgi.p|Nanoce1779_2|379298|organism=Nannochloropsis oceanica|type=polypeptide|length=270bp MAYLPCHRGLQDFAVMCTWEGDNTVMALQTARYLVRSYVKAKQGGETLAG SVSYLQASHPPAWRARTAHDLLDMDVQQEAWRALLAAKVSAAAERVLARQ TALAGNEAQAFTDNQVELFHCAKTHVYYNVAARFMEAVVEAEATHPALAP LLARLSHLFSLSNLLEESSGLLESGFAMPGQLQLAREAVSSLLLALRPDA VPLVDAFNYSDAVLGSYLGTASGDIYTGYLHQVQRLVPENKVSVAPYILT QVKPLMQGADLISTDEDEE* back to topmRNA from alignment at scaffold_62:1042..3435+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10606 ID=mRNA_10606|Name=jgi.p|Nanoce1779_2|379298|organism=Nannochloropsis oceanica|type=mRNA|length=2394bp|location=Sequence derived from alignment at scaffold_62:1042..3435+ (Nannochloropsis oceanica) GGCTGCCTACGCTTGGCATTTCCAAGCCGCCTACGTTCTGCATCTCAACG
ACTCCCTCGACGAGGGGCTGGAGGCCGGCGATCTCTCCATCCTCAAAGAC
GTCCACGGCACTATGGCAGGTACGCTCTCCCTCCCTCCCTCCCTCCCGGC
CTCAATATTCGCCCCGCCGTCCACTCCCCCCCACCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCAGGCCTCAAGGCATTCGGGACATGGCATACTTACCA
TGCCATCGAGGCTTGCAGGCAAGTCTGTGGAGGTCATGGCTACAGCAAGT
ACAACGGCCTCTCAGGCACCTTGCAGGTACGCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCTTATCACGTCCAGATCGTGAAGCCCGTCCCATCAA
CGACACCCGATACTGTCGGATGGACCAAAAACTGACCCCTCCCTTCTTCC
CTCCCTTCCTCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCGCCCG
CCCTCCCGCCCTCCCTCAGGACTTCGCGGTGATGTGCACATGGGAGGGCG
ACAACACGGTCATGGCTCTCCAAACAGCCCGCTATCTCGTCCGGTCCTAT
GTCAAGGCCAAGCAGGGAGGAGGTAGGGAGGCAGGGGGGCAAGGGGGGAG
GAAGGGCGATGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAAGGTGGGGGGGGGGGGAGGGAGGATAGCGGCCAACAACAATG
TAACCGTCCCTCCCTCCATCCCTCCCCCCTCTCCCCCCCCCTCCCTCCCC
CCCTCCCTCAGAAACCCTGGCCGGCTCTGTCTCCTACCTCCAAGCCTCCC
ATCCCCCCGCCTGGCGCGCACGCACCGCGCACGACCTGCTCGACATGGAC
GTGCAACAAGAGGTACCTCCCTCCTTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCTGACTCCATCATTTTACCTCCCTACCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCAGGCGTGGCGCGCCCTCTTGGCT
GCCAAGGTCTCGGCGGCGGCCGAGCGAGTGCTGGCACGACAAACAGCACT
GGCCGGAAATGAAGCGCAGGTGAGATACTGACCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCCAGCCTCCCGTTCGCACTC
TCTACCTGTTCTGTCCCTCCTCCCCTATCCTTTATTGTCTACTTATCGCC
TCCCGCGCGCCTCCCTTCTTCCCTCCCTCTCTCCCTCCCTTCCTCCGTCT
CTGGCAGCCTTTCACTGACGACCTTCCTCTCTTTCCTTCCTCCCTTCCTC
CCTCCCTCCCTCCCTCGCAGGCCTTCACTGACAATCAAGTTGAGCTCTTC
CATTGCGCCAAGACGCACGTGTACTACAACGTGGCCGCCCGCTTCATGGA
GGCCGTAGTGGAGGTAGGGAGGGAGCGACGGAGTCGACAAAACAGTTTTG
CCGACAGAAAGACTGAGTCCTTATCCCCACCTTCCCTCCCTCCCTGCCGT
CCTCCCTCCCTCCCTCCCTCCCTCATAATCAGGCCGAAGCCACCCATCCA
GCCCTTGCTCCCCTCCTTGCCCGTCTCTCGCACCTCTTTTCCCTCTCGAA
TCTTCTAGAAGAAAGCTCGGGCCTTCTAGAAAGTGGCTTTGCCATGCCTG
GGCAACTGCAGCTGGCGCGGGAGGTGAGGGAGGGAGGCAGGGGAGTGAGG
GAAGGAGGAAGAGGAGGGTGATTCACCTCGTACGGGTGCTGATGGTGGCC
TTGAGTAATGCCACGCCTGAGGAGGCAAAGGGAACTCTCTTCCTCTTCAG
GTCTGCAACCACAACATGCTCCTTTCGTCTCACCGTTCGCCCGCCCCTCC
CTCCCTCCCCAGGCCGTGTCCTCCCTCCTCCTCGCCCTCCGCCCCGACGC
CGTCCCTCTGGTAGATGCCTTCAACTACTCCGATGCCGTCCTCGGCTCTT
ACCTCGGCACGGCCAGCGGCGACATCTACACCGGCTACCTTCACCAAGTG
CAACGGCTCGTGCCGGAGAACAAGGCAAGGCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCTTAATGGTTCCCCTTGTCGCGTGCTTCGACTTT
TCTCCCTGGCTTCGTCCCCACCCACCACTCTCCCTTCCTCCCTCCCTTCC
TCTCCTTTTCCCTCCTTCTCTTCTTGTCCAACTCACCGCCCCTTCTTGCT
TCCTTCCCTTCCTCCCTCCCTCCAGGTCTCCGTCGCTCCCTACATCCTCA
CTCAGGTGAAGCCCCTGATGCAAGGCGCGGACCTCATCTCCACTGATGAA
GACGAGGAGTAGAAGGAGGGATGGAGGGAGGGGGGGAAGATAAC back to topCoding sequence (CDS) from alignment at scaffold_62:1042..3435+ >mRNA_10606 ID=mRNA_10606|Name=jgi.p|Nanoce1779_2|379298|organism=Nannochloropsis oceanica|type=CDS|length=6480bp|location=Sequence derived from alignment at scaffold_62:1042..3435+ (Nannochloropsis oceanica) ATGGCATACTTACCATGCCATCGAGGCTTGCAGGACTTCGCGGTGATGTG CACATGGGAGGGCGACAACACGGTCATGGCTCTCCAAACAGCCCGCTATC TCGTCCGGTCCTATGTCAAGGCCAAGCAGGGAGGAGAAACCCTGGCCGGC TCTGTCTCCTACCTCCAAGCCTCCCATCCCCCCGCCTGGCGCGCACGCAC CGCGCACGACCTGCTCGACATGGACGTGCAACAAGAGGCGTGGCGCGCCC TCTTGGCTGCCAAGGTCTCGGCGGCGGCCGAGCGAGTGCTGGCACGACAA ACAGCACTGGCCGGAAATGAAGCGCAGGCCTTCACTGACAATCAAGTTGA GCTCTTCCATTGCGCCAAGACGCACGTGTACTACAACGTGGCCGCCCGCT TCATGGAGGCCGTAGTGGAGGCCGAAGCCACCCATCCAGCCCTTGCTCCC CTCCTTGCCCGTCTCTCGCACCTCTTTTCCCTCTCGAATCTTCTAGAAGA AAGCTCGGGCCTTCTAGAAAGTGGCTTTGCCATGCCTGGGCAACTGCAGC TGGCGCGGGAGGCCGTGTCCTCCCTCCTCCTCGCCCTCCGCCCCGACGCC GTCCCTCTGGTAGATGCCTTCAACTACTCCGATGCCGTCCTCGGCTCTTA CCTCGGCACGGCCAGCGGCGACATCTACACCGGCTACCTTCACCAAGTGC AACGGCTCGTGCCGGAGAACAAGGTCTCCGTCGCTCCCTACATCCTCACT CAGGTGAAGCCCCTGATGCAAGGCGCGGACCTCATCTCCACTGATGAAGA CGAGGAGTAGATGGCATACTTACCATGCCATCGAGGCTTGCAGGACTTCG CGGTGATGTGCACATGGGAGGGCGACAACACGGTCATGGCTCTCCAAACA GCCCGCTATCTCGTCCGGTCCTATGTCAAGGCCAAGCAGGGAGGAGAAAC CCTGGCCGGCTCTGTCTCCTACCTCCAAGCCTCCCATCCCCCCGCCTGGC GCGCACGCACCGCGCACGACCTGCTCGACATGGACGTGCAACAAGAGGCG TGGCGCGCCCTCTTGGCTGCCAAGGTCTCGGCGGCGGCCGAGCGAGTGCT GGCACGACAAACAGCACTGGCCGGAAATGAAGCGCAGGCCTTCACTGACA ATCAAGTTGAGCTCTTCCATTGCGCCAAGACGCACGTGTACTACAACGTG GCCGCCCGCTTCATGGAGGCCGTAGTGGAGGCCGAAGCCACCCATCCAGC CCTTGCTCCCCTCCTTGCCCGTCTCTCGCACCTCTTTTCCCTCTCGAATC TTCTAGAAGAAAGCTCGGGCCTTCTAGAAAGTGGCTTTGCCATGCCTGGG CAACTGCAGCTGGCGCGGGAGGCCGTGTCCTCCCTCCTCCTCGCCCTCCG CCCCGACGCCGTCCCTCTGGTAGATGCCTTCAACTACTCCGATGCCGTCC TCGGCTCTTACCTCGGCACGGCCAGCGGCGACATCTACACCGGCTACCTT CACCAAGTGCAACGGCTCGTGCCGGAGAACAAGGTCTCCGTCGCTCCCTA CATCCTCACTCAGGTGAAGCCCCTGATGCAAGGCGCGGACCTCATCTCCA CTGATGAAGACGAGGAGTAGATGGCATACTTACCATGCCATCGAGGCTTG CAGGACTTCGCGGTGATGTGCACATGGGAGGGCGACAACACGGTCATGGC TCTCCAAACAGCCCGCTATCTCGTCCGGTCCTATGTCAAGGCCAAGCAGG GAGGAGAAACCCTGGCCGGCTCTGTCTCCTACCTCCAAGCCTCCCATCCC CCCGCCTGGCGCGCACGCACCGCGCACGACCTGCTCGACATGGACGTGCA ACAAGAGGCGTGGCGCGCCCTCTTGGCTGCCAAGGTCTCGGCGGCGGCCG AGCGAGTGCTGGCACGACAAACAGCACTGGCCGGAAATGAAGCGCAGGCC TTCACTGACAATCAAGTTGAGCTCTTCCATTGCGCCAAGACGCACGTGTA CTACAACGTGGCCGCCCGCTTCATGGAGGCCGTAGTGGAGGCCGAAGCCA CCCATCCAGCCCTTGCTCCCCTCCTTGCCCGTCTCTCGCACCTCTTTTCC CTCTCGAATCTTCTAGAAGAAAGCTCGGGCCTTCTAGAAAGTGGCTTTGC CATGCCTGGGCAACTGCAGCTGGCGCGGGAGGCCGTGTCCTCCCTCCTCC TCGCCCTCCGCCCCGACGCCGTCCCTCTGGTAGATGCCTTCAACTACTCC GATGCCGTCCTCGGCTCTTACCTCGGCACGGCCAGCGGCGACATCTACAC CGGCTACCTTCACCAAGTGCAACGGCTCGTGCCGGAGAACAAGGTCTCCG TCGCTCCCTACATCCTCACTCAGGTGAAGCCCCTGATGCAAGGCGCGGAC CTCATCTCCACTGATGAAGACGAGGAGTAGATGGCATACTTACCATGCCA TCGAGGCTTGCAGGACTTCGCGGTGATGTGCACATGGGAGGGCGACAACA CGGTCATGGCTCTCCAAACAGCCCGCTATCTCGTCCGGTCCTATGTCAAG GCCAAGCAGGGAGGAGAAACCCTGGCCGGCTCTGTCTCCTACCTCCAAGC CTCCCATCCCCCCGCCTGGCGCGCACGCACCGCGCACGACCTGCTCGACA TGGACGTGCAACAAGAGGCGTGGCGCGCCCTCTTGGCTGCCAAGGTCTCG GCGGCGGCCGAGCGAGTGCTGGCACGACAAACAGCACTGGCCGGAAATGA AGCGCAGGCCTTCACTGACAATCAAGTTGAGCTCTTCCATTGCGCCAAGA CGCACGTGTACTACAACGTGGCCGCCCGCTTCATGGAGGCCGTAGTGGAG GCCGAAGCCACCCATCCAGCCCTTGCTCCCCTCCTTGCCCGTCTCTCGCA CCTCTTTTCCCTCTCGAATCTTCTAGAAGAAAGCTCGGGCCTTCTAGAAA GTGGCTTTGCCATGCCTGGGCAACTGCAGCTGGCGCGGGAGGCCGTGTCC TCCCTCCTCCTCGCCCTCCGCCCCGACGCCGTCCCTCTGGTAGATGCCTT CAACTACTCCGATGCCGTCCTCGGCTCTTACCTCGGCACGGCCAGCGGCG ACATCTACACCGGCTACCTTCACCAAGTGCAACGGCTCGTGCCGGAGAAC AAGGTCTCCGTCGCTCCCTACATCCTCACTCAGGTGAAGCCCCTGATGCA AGGCGCGGACCTCATCTCCACTGATGAAGACGAGGAGTAGATGGCATACT TACCATGCCATCGAGGCTTGCAGGACTTCGCGGTGATGTGCACATGGGAG GGCGACAACACGGTCATGGCTCTCCAAACAGCCCGCTATCTCGTCCGGTC CTATGTCAAGGCCAAGCAGGGAGGAGAAACCCTGGCCGGCTCTGTCTCCT ACCTCCAAGCCTCCCATCCCCCCGCCTGGCGCGCACGCACCGCGCACGAC CTGCTCGACATGGACGTGCAACAAGAGGCGTGGCGCGCCCTCTTGGCTGC CAAGGTCTCGGCGGCGGCCGAGCGAGTGCTGGCACGACAAACAGCACTGG CCGGAAATGAAGCGCAGGCCTTCACTGACAATCAAGTTGAGCTCTTCCAT TGCGCCAAGACGCACGTGTACTACAACGTGGCCGCCCGCTTCATGGAGGC CGTAGTGGAGGCCGAAGCCACCCATCCAGCCCTTGCTCCCCTCCTTGCCC GTCTCTCGCACCTCTTTTCCCTCTCGAATCTTCTAGAAGAAAGCTCGGGC CTTCTAGAAAGTGGCTTTGCCATGCCTGGGCAACTGCAGCTGGCGCGGGA GGCCGTGTCCTCCCTCCTCCTCGCCCTCCGCCCCGACGCCGTCCCTCTGG TAGATGCCTTCAACTACTCCGATGCCGTCCTCGGCTCTTACCTCGGCACG GCCAGCGGCGACATCTACACCGGCTACCTTCACCAAGTGCAACGGCTCGT GCCGGAGAACAAGGTCTCCGTCGCTCCCTACATCCTCACTCAGGTGAAGC CCCTGATGCAAGGCGCGGACCTCATCTCCACTGATGAAGACGAGGAGTAG ATGGCATACTTACCATGCCATCGAGGCTTGCAGGACTTCGCGGTGATGTG CACATGGGAGGGCGACAACACGGTCATGGCTCTCCAAACAGCCCGCTATC TCGTCCGGTCCTATGTCAAGGCCAAGCAGGGAGGAGAAACCCTGGCCGGC TCTGTCTCCTACCTCCAAGCCTCCCATCCCCCCGCCTGGCGCGCACGCAC CGCGCACGACCTGCTCGACATGGACGTGCAACAAGAGGCGTGGCGCGCCC TCTTGGCTGCCAAGGTCTCGGCGGCGGCCGAGCGAGTGCTGGCACGACAA ACAGCACTGGCCGGAAATGAAGCGCAGGCCTTCACTGACAATCAAGTTGA GCTCTTCCATTGCGCCAAGACGCACGTGTACTACAACGTGGCCGCCCGCT TCATGGAGGCCGTAGTGGAGGCCGAAGCCACCCATCCAGCCCTTGCTCCC CTCCTTGCCCGTCTCTCGCACCTCTTTTCCCTCTCGAATCTTCTAGAAGA AAGCTCGGGCCTTCTAGAAAGTGGCTTTGCCATGCCTGGGCAACTGCAGC TGGCGCGGGAGGCCGTGTCCTCCCTCCTCCTCGCCCTCCGCCCCGACGCC GTCCCTCTGGTAGATGCCTTCAACTACTCCGATGCCGTCCTCGGCTCTTA CCTCGGCACGGCCAGCGGCGACATCTACACCGGCTACCTTCACCAAGTGC AACGGCTCGTGCCGGAGAACAAGGTCTCCGTCGCTCCCTACATCCTCACT CAGGTGAAGCCCCTGATGCAAGGCGCGGACCTCATCTCCACTGATGAAGA CGAGGAGTAGATGGCATACTTACCATGCCATCGAGGCTTGCAGGACTTCG CGGTGATGTGCACATGGGAGGGCGACAACACGGTCATGGCTCTCCAAACA GCCCGCTATCTCGTCCGGTCCTATGTCAAGGCCAAGCAGGGAGGAGAAAC CCTGGCCGGCTCTGTCTCCTACCTCCAAGCCTCCCATCCCCCCGCCTGGC GCGCACGCACCGCGCACGACCTGCTCGACATGGACGTGCAACAAGAGGCG TGGCGCGCCCTCTTGGCTGCCAAGGTCTCGGCGGCGGCCGAGCGAGTGCT GGCACGACAAACAGCACTGGCCGGAAATGAAGCGCAGGCCTTCACTGACA ATCAAGTTGAGCTCTTCCATTGCGCCAAGACGCACGTGTACTACAACGTG GCCGCCCGCTTCATGGAGGCCGTAGTGGAGGCCGAAGCCACCCATCCAGC CCTTGCTCCCCTCCTTGCCCGTCTCTCGCACCTCTTTTCCCTCTCGAATC TTCTAGAAGAAAGCTCGGGCCTTCTAGAAAGTGGCTTTGCCATGCCTGGG CAACTGCAGCTGGCGCGGGAGGCCGTGTCCTCCCTCCTCCTCGCCCTCCG CCCCGACGCCGTCCCTCTGGTAGATGCCTTCAACTACTCCGATGCCGTCC TCGGCTCTTACCTCGGCACGGCCAGCGGCGACATCTACACCGGCTACCTT CACCAAGTGCAACGGCTCGTGCCGGAGAACAAGGTCTCCGTCGCTCCCTA CATCCTCACTCAGGTGAAGCCCCTGATGCAAGGCGCGGACCTCATCTCCA CTGATGAAGACGAGGAGTAGATGGCATACTTACCATGCCATCGAGGCTTG CAGGACTTCGCGGTGATGTGCACATGGGAGGGCGACAACACGGTCATGGC TCTCCAAACAGCCCGCTATCTCGTCCGGTCCTATGTCAAGGCCAAGCAGG GAGGAGAAACCCTGGCCGGCTCTGTCTCCTACCTCCAAGCCTCCCATCCC CCCGCCTGGCGCGCACGCACCGCGCACGACCTGCTCGACATGGACGTGCA ACAAGAGGCGTGGCGCGCCCTCTTGGCTGCCAAGGTCTCGGCGGCGGCCG AGCGAGTGCTGGCACGACAAACAGCACTGGCCGGAAATGAAGCGCAGGCC TTCACTGACAATCAAGTTGAGCTCTTCCATTGCGCCAAGACGCACGTGTA CTACAACGTGGCCGCCCGCTTCATGGAGGCCGTAGTGGAGGCCGAAGCCA CCCATCCAGCCCTTGCTCCCCTCCTTGCCCGTCTCTCGCACCTCTTTTCC CTCTCGAATCTTCTAGAAGAAAGCTCGGGCCTTCTAGAAAGTGGCTTTGC CATGCCTGGGCAACTGCAGCTGGCGCGGGAGGCCGTGTCCTCCCTCCTCC TCGCCCTCCGCCCCGACGCCGTCCCTCTGGTAGATGCCTTCAACTACTCC GATGCCGTCCTCGGCTCTTACCTCGGCACGGCCAGCGGCGACATCTACAC CGGCTACCTTCACCAAGTGCAACGGCTCGTGCCGGAGAACAAGGTCTCCG TCGCTCCCTACATCCTCACTCAGGTGAAGCCCCTGATGCAAGGCGCGGAC CTCATCTCCACTGATGAAGACGAGGAGTAG back to top
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