jgi.p|Nanoce1779_2|627406, mRNA_1009 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|627406
Unique Name	mRNA_1009
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	5685
Alignment location	scaffold_2:1003491..1009175 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	627492
Track	FilteredModels2
ProteinId	627406

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_2	supercontig	scaffold_2:1003491..1009175 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|627406	gene_1009	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|627406	mRNA_1009-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_1009	CDS_1009	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_2:1003491..1009175-
coding sequence from alignment at scaffold_2:1003491..1009175-

mRNA sequence

>mRNA_1009 ID=mRNA_1009|Name=jgi.p|Nanoce1779_2|627406|organism=Nannochloropsis oceanica|type=mRNA|length=5685bp
ACTTCCCGCTGTGTTAGTGTCTGTGCGAGAGTTGATTAAGCGTGAAGTGA
GACAGGCAGGAGGCAATGTGTGCTGCCCGAGTTGGCGAATTGCCACCACG
GGCGACGACCCGATGCGCTGTCCGGTTTCTCGCGGCCACCGACTCGACAT
TTAATCACGACCCGATCACCACACACACACACAAACAGTTATCTTATCAT
TCTCTTTGTGCCGTTCAAAGCCGGCAGGCTAACGCAGTACTGCTTGCTCC
ATCTTGCGTCCCCTCCTTGGCGAGCGCCAGCCTCCCCGCTCCCTCCCCCT
AACTTCTTCTTTTTTGTCCACGTCCACACCGACCCGGCATTTTTGCCCAC
ATCTCACACCAACATCAGCCTTGCACGCACAGTGATTATGCCGAAGGCAG
CGGCTGATGAAAGCAGCGAGGACGAGCTCTGGATCTACGATGAGGAGGAC
GAGGACGAGGCAGCGGAGGAGAGGGACGGGGAAGGGGAGGAGACCGAGGA
GGACGAGGAGTGCAACAAATGCCACGACTTTGGGGAGCTGATCTTGTGCG
ACTACTGCCCCAAGGCATACCATGCCAAGTGTGCTGGCCTGCAGGAGCCC
CCGCATGGGAACGCCATTTTTACGTGTGAGGATTGCGGGATCGACATCTG
CGACGCCTGCAAAGCCAGAGAAGCGACAATCCGGTGCCGGTACTGTCGCC
GGGCCTATCACGGCAAATGCGTGCATCGTGTCCCCTCCCTCAACGATACG
TGGCTCTGCGGAGCGTGTATTAAGGACATAGCCACCCACCATGGAGTCGA
GAAAATACTTTCTGTCCGCCCCTATCGGAAGCTCGCCCCTGCCGAAGAAG
CAAAGCGCCTAGAAGCTTGGGCCGCACTGGCCGTGCAAGAAAAGGCAGCA
GCAGCAGCAGCAACAACAACAACAGGGACAGTAAAAACAAGGACAGCACC
AGCTGCAGCGGCATCGGTGAGCATCAGCACTAGCAGCAGTAGCGGCGATG
GCAGCACTCCCTCGAAGGCGACTAAAAGGAAGATCAAACAGGTCGCGGAG
CGGAAGGTGACCGAAGCCGAGTATTTTGTCCGATGGGTGGGAAAGGCCTT
CTGGCATTGCTCCTGGGTGCCTGAATCCTTCCTCGCTGCCACTAACAAGG
CAAAGCTGCGAAATTTTAAACTACGACAGTCAACGTCTACGCATGCTGTC
CATGTACCACAGGAGGCAGCGGAGACGGAGGAGGAAGAAGTGGTCGAGAG
CGCATGGCGGCAGGTGGATCGAATCTTGGACGAACGAATGAGCAAGTCAT
TGGATGGGCGGGTAAAGGTAAAGGAGTGTCTGGTGAAATGGCAGGGGTTG
GAGTATGATCAATGCACGTGGGAGGTGGAGTCTGATTTGGTAAGGGAGGG
TTTTGAGTCTGCCTTGAGGCATTTCGCAGAGCGAGACACGGATTGGGTCC
GCCCCTTATTATCGATGGATGATCCGGCGAGTTTTCGCAGCACCAGCACC
AGCAGTGCCAGCACCAGTGCAAGAATAAGTGGCTACAAACCGATAAGCGT
TCAACCGGGGTGCTTTAAAGGAGGCACTTGGCATGACTATCAAGTTGAAG
GGATCAACTTTCTGCGCAATTCGTGGTATGCTCGTAATAATGTGATCTTG
GCGGACGAAATGGGTTTGGGAAAGACTATACAGACCCTGGGCTTTCTACG
GGCGATTGCCACGGAGAAGGTTATGGGGGGAGGTTTTTTTTTGCCGTTTT
TGGTGGTGTGTCCCTTGGCAGTGGTGGATAACTGGGAAAGGGAGTGTAAG
ACATGGTGCCCAGAACTGGATGTTGTCGTGTACAAAGGCTCGCAGGTATC
AAGGGAGATGATTCAACGGTATGAGGTGCGGCCGGCGAGCAGCAGCAGCA
GCAGTGCCAGAAACAGCAACGGCAACAATGGCGGTGCGAGCAAGGCACGG
AAGCGACGTAAATTAAGCGGAGGAGAGGAAGAGAAAGGGAACGGAGAGGG
AGAGGAGAAGGAGGGGGAGGCAAGTGGAGTGGCTATGGATATGGATGTGA
GTGGCACGACTGTTGAGGAGGGAAGGGGCAGTAGCAACAGCAGTAGCAGC
AGCTTGAAACGTCGTCGGTGCGGGAATTCAGAGGAGGGGAAAATGAACAT
ATACTTCCATGTGTTGATCACTTCGTTTGAGTACGCGTGGAAGGATGCTG
GGTTTTTTAAGAAGGTCACGTGGGAGACTGTAGTTGTAGATGAGGGCCAC
CGGCTCAAGGGGGGGGCAACAGGGAAACTCTATCATGCTCTCAAGGAGAT
GAAAGTCGGTCATCGAGTGCTTCTGACGGGCACGCCGCTGCAAAATTCGA
TTGAGGAACTGTTTAACCTTTTACATTTTTTACAGCCGGTCAAGTTTTCG
GATATCGAAGTGTTCAAGGGGGATTTTGCGTCCATGGATAAGGAGGAACA
GCTGGGAAAGTTGCATGCTTTGATTGCCCCACACATGCTGCGACGGATGA
AAAAAGATGTGAATTTAGTCATTCCTGAAAAACATGAGTTGATTGTCCGA
GTGGAGCTGACACAAACCCAGAAGACTTATTATCGTTTGATTTTGACGCA
AAATTTCGAGGTGTTGCGGAAGAAATTCAAGGCGGCGAGTAGTATTTATA
ACATGATTATGCAGTTGAAGAAGGTTTGCAATCACCCTTTCCTGATGAGG
GAGGAAGATTTGTGTTACTCCATGAATGAAAACTACGAAAAGCGAGCGCA
GGCCTTGTTGACTTGCTCGGGAAAATTGGAGTTGTTGGACCGTATGTTAT
TGAGGCTGAAGGAGGGAGGGCACAGGGTGCTCTTATTCTCGCAGATGACC
ACGATGCTAGACTTGCTGGAAGAGCATTTGATGAATCGGGGTTGGAGGTA
CCAGAGGCTTGATGGGTCGACGAAAACTAGTGATCGGCAAGCACGGATTG
ACGCGTATAATCGGGTGTCAAAAGCAGGAGGAGCCGGAGGACGAGCAGGT
GGAGGGGGACGAGAGGAGGATGAGTACTTTATTTTCTTGTTGTCCACGCG
GGCGGGGGGTTTGGGTATCAACTTGACAAGTGCCGACACGGTGATAATTT
ATGATTTAGATTGGAACCCGCACAACGACTTACAAGCGCTGGCAAGAGCG
CATCGAATCGGCCAAACGCGGAAGGTTATGGTGTACCGCTTTTTGACTCG
CAACACAGTCGAAGAAAGGATCTTGCAACTGGCCAAGAAAAAGTTGTTGT
TGGAGCATGTCGTGGTGGGGGAGGCAGGGAGAGGACGCAAGCTCACTCAG
GATGAGCTGGACGATGTCTTGAAATATGGGGCGGAGGAATTGTTTGCGGA
CGAGGAGGAAGAGGAGGGGAAGGAGGGTGAGGGGGGGAGAGGGGCTGCTG
TCGCAGCAGGAGCAGCGGGAGCAGAAACAAGGGGAGAGGAGAAGGAAGCG
GTAAATGCGAAGAAATGGGGGGATGGGGGGACGAGGGGGAAGACAATGAG
GATTTTGTGGGATGATGAGGCGGTCGAACGCTTGTTGGATCGAAACATTG
TTGAGGAAGGGGCAGCGGGGCTAGAGTCGGAGGCCGAGGTAGGGGAAGGA
GGTGCGGAGGGAGAGAAGAGGACAGGAAAGGGATTGTCAGATTTATTTCA
GTCCTTCAAGGTGGCAAAGTTTGCAAGCGTGGAGGATGCGGAGGAGGAGG
CTGCTGCTGCTGTGGCTGCTGTTGCTGCGGTTGCAGCAGACGCGGCGGGG
GCAGAGGAGTTTGAAAGGCTAAGGAGAGAGAAGGCAGAGGCTTTGCTGAA
GGAAACTTTGCCCGAGAATACGACGAAGACTTGGCAGGAGCTTTTGGAAG
CACGGCATGAGAGTCGCCATGTGAAGGAGATGGCGAGGCTAGGGAAAGGG
AAGAGGGAGAGAAAAGAGGCGCAGAGGAGGGAGGGAACGTTTAGTGGACC
TTTGTCTGATTTTTTGTCGGGGTCGGATGGGGGGGGGGAGGAAGGGGAGG
AGGAAGAGGAGGGGGATGAGGATTGGGAGGATGGAGGGGAGGAAGACATG
GAGGATGAGGAGGATTTTGATAATGTTGGAAGTAGAAGTAAGAGGAGGTC
GACTGCTGCAGCGACGGCACAGGTGGGTGTGCCACGCGTGCAAGTTGCAG
GATTCGGGTATGTGCAACGACAGGCTGTTAGGATGTATTTGATGCAGTTT
GGTCTCACAGGAGGAAAGAAGGATGGGAAGAAGGGGAGAAAAGGGGGGGA
ATTCAAGATTTTTTACGATTTGCTCCAGAAGCATGCCCGTGGGAAATTAG
CGGAACGGAGTGAGGAGGAGGTGAGGGCTTACTTGCAGATGCTCTTGGGT
GGTGGTGGTGCTGCTGCTGGGGGGGCTGCGACTGCAACTGCTGGCACTAC
TGCGGCGGTGGGGACGTGTTATATGCAGAGGGATTTGCTCAGGCGTGTAT
CATTGCTTAGGCTTATCGAGGATAAGGTGCTTGAGTACCAGAATCGAGAA
CCGGATTCATTTTTTATTGACGATGGGAAACAGACGGGCTGGTCGAAGGC
CTGCTCGATTACCACCAAAACGTTCAAATTAAATTGGGGAAGGGCAAATG
ATTTGATGTTATTGGAATTGACCCTCAGGCATGGCTATGGGAAGTGGCGC
TCGTTTTTGAAGGATGCCACATTCGTTGCTTCCCTCCCCCCTACGGCTTT
GACGGTGGCGGGGCAGCAGCAGCAACAACAACAGCGATTATCGACCTCGC
CAGTGGGGAGTGGAGAAGGGGATGAATTTGGGGTGTCGGTGCAAGGAAAT
GGGATGCCTAAAGCGATTGCGGCGCTTGCAGGAGCAGGAATAGGAGCAGG
AGCAGCTGTGTCAGGGTCCGTGAATAAATCGCACCGTCGCAAAGGGTACT
CGGACGGACAGGAGAAGCAGCTTTTGTCGATCGTGCAAAAGAGGATGAAG
CTCATGTCCCAAGCCTTGTTCGTCGAAAACCAACGGCTGCAAAGGAAGAT
CGAAGCGATCACACACATTCAATCCCGCGTCTCTGTCCTTATCGCACAGA
AGACAACCGCTGATGAGGTACTCCCTCCCCCCGCTCTCGCCCACCTCCTC
GAGCAACGCCGGCAGTTGCAGCTAAAGGTCCAAGAGGTGTTTGAAGAGCT
GAGGGCCAAGGCACGCTTAGAGACATCGATCAAAGTGATTGAGTTGAATA
AAAGATTAGAAGGGCTGAATGCCAGCGTGCATGATTCATTGCGACGGAAC
CAAGAGTTATTATCAGCCTTGAACAATACCCGGCTTCAGATGGTGGTTGG
CCAGGTGATCACTGAGAGACTGACCCGTCAGACAAAAGACTTCGAGGATA
TCAACCGTGACATCAAAGAGGGCATTCAGGCGACCGCGGATTGCCTTCAG
GAGATGGAACGGGTGATTGAGGGGGCGTACACTGAAGCGGTTACTTATGT
GCCGGTGACGGTAGCACCGGCACCAAGGGCGACTGCACCCAAGGAGGACG
CTGCGATGGTAGACCTTTGTGATTCGGACAATGAGGAAGTGGGAAAGGAG
AGCAGCACTTCTATCGAAAGTCGGGAGGAGAAGAGCAATGGCGACAGTCA
CGTGACTGATGGTGGCAATGGGGTGGCGCCGATGGTTGAGGGGGCGGAGG
GGGAGGGGGCGAGACCCTAGGGCGGGAGTGCAGGG

protein sequence of jgi.p|Nanoce1779_2|627406

>mRNA_1009-protein ID=mRNA_1009-protein|Name=jgi.p|Nanoce1779_2|627406|organism=Nannochloropsis oceanica|type=polypeptide|length=1761bp
MPKAAADESSEDELWIYDEEDEDEAAEERDGEGEETEEDEECNKCHDFGE
LILCDYCPKAYHAKCAGLQEPPHGNAIFTCEDCGIDICDACKAREATIRC
RYCRRAYHGKCVHRVPSLNDTWLCGACIKDIATHHGVEKILSVRPYRKLA
PAEEAKRLEAWAALAVQEKAAAAAATTTTGTVKTRTAPAAAASVSISTSS
SSGDGSTPSKATKRKIKQVAERKVTEAEYFVRWVGKAFWHCSWVPESFLA
ATNKAKLRNFKLRQSTSTHAVHVPQEAAETEEEEVVESAWRQVDRILDER
MSKSLDGRVKVKECLVKWQGLEYDQCTWEVESDLVREGFESALRHFAERD
TDWVRPLLSMDDPASFRSTSTSSASTSARISGYKPISVQPGCFKGGTWHD
YQVEGINFLRNSWYARNNVILADEMGLGKTIQTLGFLRAIATEKVMGGGF
FLPFLVVCPLAVVDNWERECKTWCPELDVVVYKGSQVSREMIQRYEVRPA
SSSSSSARNSNGNNGGASKARKRRKLSGGEEEKGNGEGEEKEGEASGVAM
DMDVSGTTVEEGRGSSNSSSSSLKRRRCGNSEEGKMNIYFHVLITSFEYA
WKDAGFFKKVTWETVVVDEGHRLKGGATGKLYHALKEMKVGHRVLLTGTP
LQNSIEELFNLLHFLQPVKFSDIEVFKGDFASMDKEEQLGKLHALIAPHM
LRRMKKDVNLVIPEKHELIVRVELTQTQKTYYRLILTQNFEVLRKKFKAA
SSIYNMIMQLKKVCNHPFLMREEDLCYSMNENYEKRAQALLTCSGKLELL
DRMLLRLKEGGHRVLLFSQMTTMLDLLEEHLMNRGWRYQRLDGSTKTSDR
QARIDAYNRVSKAGGAGGRAGGGGREEDEYFIFLLSTRAGGLGINLTSAD
TVIIYDLDWNPHNDLQALARAHRIGQTRKVMVYRFLTRNTVEERILQLAK
KKLLLEHVVVGEAGRGRKLTQDELDDVLKYGAEELFADEEEEEGKEGEGG
RGAAVAAGAAGAETRGEEKEAVNAKKWGDGGTRGKTMRILWDDEAVERLL
DRNIVEEGAAGLESEAEVGEGGAEGEKRTGKGLSDLFQSFKVAKFASVED
AEEEAAAAVAAVAAVAADAAGAEEFERLRREKAEALLKETLPENTTKTWQ
ELLEARHESRHVKEMARLGKGKRERKEAQRREGTFSGPLSDFLSGSDGGG
EEGEEEEEGDEDWEDGGEEDMEDEEDFDNVGSRSKRRSTAAATAQVGVPR
VQVAGFGYVQRQAVRMYLMQFGLTGGKKDGKKGRKGGEFKIFYDLLQKHA
RGKLAERSEEEVRAYLQMLLGGGGAAAGGAATATAGTTAAVGTCYMQRDL
LRRVSLLRLIEDKVLEYQNREPDSFFIDDGKQTGWSKACSITTKTFKLNW
GRANDLMLLELTLRHGYGKWRSFLKDATFVASLPPTALTVAGQQQQQQQR
LSTSPVGSGEGDEFGVSVQGNGMPKAIAALAGAGIGAGAAVSGSVNKSHR
RKGYSDGQEKQLLSIVQKRMKLMSQALFVENQRLQRKIEAITHIQSRVSV
LIAQKTTADEVLPPPALAHLLEQRRQLQLKVQEVFEELRAKARLETSIKV
IELNKRLEGLNASVHDSLRRNQELLSALNNTRLQMVVGQVITERLTRQTK
DFEDINRDIKEGIQATADCLQEMERVIEGAYTEAVTYVPVTVAPAPRATA
PKEDAAMVDLCDSDNEEVGKESSTSIESREEKSNGDSHVTDGGNGVAPMV
EGAEGEGARP*

mRNA from alignment at scaffold_2:1003491..1009175-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_1009 ID=mRNA_1009|Name=jgi.p|Nanoce1779_2|627406|organism=Nannochloropsis oceanica|type=mRNA|length=5685bp|location=Sequence derived from alignment at scaffold_2:1003491..1009175- (Nannochloropsis oceanica)
ACTTCCCGCTGTGTTAGTGTCTGTGCGAGAGTTGATTAAGCGTGAAGTGA
GACAGGCAGGAGGCAATGTGTGCTGCCCGAGTTGGCGAATTGCCACCACG
GGCGACGACCCGATGCGCTGTCCGGTTTCTCGCGGCCACCGACTCGACAT
TTAATCACGACCCGATCACCACACACACACACAAACAGTTATCTTATCAT
TCTCTTTGTGCCGTTCAAAGCCGGCAGGCTAACGCAGTACTGCTTGCTCC
ATCTTGCGTCCCCTCCTTGGCGAGCGCCAGCCTCCCCGCTCCCTCCCCCT
AACTTCTTCTTTTTTGTCCACGTCCACACCGACCCGGCATTTTTGCCCAC
ATCTCACACCAACATCAGCCTTGCACGCACAGTGATTATGCCGAAGGCAG
CGGCTGATGAAAGCAGCGAGGACGAGCTCTGGATCTACGATGAGGAGGAC
GAGGACGAGGCAGCGGAGGAGAGGGACGGGGAAGGGGAGGAGACCGAGGA
GGACGAGGAGTGCAACAAATGCCACGACTTTGGGGAGCTGATCTTGTGCG
ACTACTGCCCCAAGGCATACCATGCCAAGTGTGCTGGCCTGCAGGAGCCC
CCGCATGGGAACGCCATTTTTACGTGTGAGGATTGCGGGATCGACATCTG
CGACGCCTGCAAAGCCAGAGAAGCGACAATCCGGTGCCGGTACTGTCGCC
GGGCCTATCACGGCAAATGCGTGCATCGTGTCCCCTCCCTCAACGATACG
TGGCTCTGCGGAGCGTGTATTAAGGACATAGCCACCCACCATGGAGTCGA
GAAAATACTTTCTGTCCGCCCCTATCGGAAGCTCGCCCCTGCCGAAGAAG
CAAAGCGCCTAGAAGCTTGGGCCGCACTGGCCGTGCAAGAAAAGGCAGCA
GCAGCAGCAGCAACAACAACAACAGGGACAGTAAAAACAAGGACAGCACC
AGCTGCAGCGGCATCGGTGAGCATCAGCACTAGCAGCAGTAGCGGCGATG
GCAGCACTCCCTCGAAGGCGACTAAAAGGAAGATCAAACAGGTCGCGGAG
CGGAAGGTGACCGAAGCCGAGTATTTTGTCCGATGGGTGGGAAAGGCCTT
CTGGCATTGCTCCTGGGTGCCTGAATCCTTCCTCGCTGCCACTAACAAGG
CAAAGCTGCGAAATTTTAAACTACGACAGTCAACGTCTACGCATGCTGTC
CATGTACCACAGGAGGCAGCGGAGACGGAGGAGGAAGAAGTGGTCGAGAG
CGCATGGCGGCAGGTGGATCGAATCTTGGACGAACGAATGAGCAAGTCAT
TGGATGGGCGGGTAAAGGTAAAGGAGTGTCTGGTGAAATGGCAGGGGTTG
GAGTATGATCAATGCACGTGGGAGGTGGAGTCTGATTTGGTAAGGGAGGG
TTTTGAGTCTGCCTTGAGGCATTTCGCAGAGCGAGACACGGATTGGGTCC
GCCCCTTATTATCGATGGATGATCCGGCGAGTTTTCGCAGCACCAGCACC
AGCAGTGCCAGCACCAGTGCAAGAATAAGTGGCTACAAACCGATAAGCGT
TCAACCGGGGTGCTTTAAAGGAGGCACTTGGCATGACTATCAAGTTGAAG
GGATCAACTTTCTGCGCAATTCGTGGTATGCTCGTAATAATGTGATCTTG
GCGGACGAAATGGGTTTGGGAAAGACTATACAGACCCTGGGCTTTCTACG
GGCGATTGCCACGGAGAAGGTTATGGGGGGAGGTTTTTTTTTGCCGTTTT
TGGTGGTGTGTCCCTTGGCAGTGGTGGATAACTGGGAAAGGGAGTGTAAG
ACATGGTGCCCAGAACTGGATGTTGTCGTGTACAAAGGCTCGCAGGTATC
AAGGGAGATGATTCAACGGTATGAGGTGCGGCCGGCGAGCAGCAGCAGCA
GCAGTGCCAGAAACAGCAACGGCAACAATGGCGGTGCGAGCAAGGCACGG
AAGCGACGTAAATTAAGCGGAGGAGAGGAAGAGAAAGGGAACGGAGAGGG
AGAGGAGAAGGAGGGGGAGGCAAGTGGAGTGGCTATGGATATGGATGTGA
GTGGCACGACTGTTGAGGAGGGAAGGGGCAGTAGCAACAGCAGTAGCAGC
AGCTTGAAACGTCGTCGGTGCGGGAATTCAGAGGAGGGGAAAATGAACAT
ATACTTCCATGTGTTGATCACTTCGTTTGAGTACGCGTGGAAGGATGCTG
GGTTTTTTAAGAAGGTCACGTGGGAGACTGTAGTTGTAGATGAGGGCCAC
CGGCTCAAGGGGGGGGCAACAGGGAAACTCTATCATGCTCTCAAGGAGAT
GAAAGTCGGTCATCGAGTGCTTCTGACGGGCACGCCGCTGCAAAATTCGA
TTGAGGAACTGTTTAACCTTTTACATTTTTTACAGCCGGTCAAGTTTTCG
GATATCGAAGTGTTCAAGGGGGATTTTGCGTCCATGGATAAGGAGGAACA
GCTGGGAAAGTTGCATGCTTTGATTGCCCCACACATGCTGCGACGGATGA
AAAAAGATGTGAATTTAGTCATTCCTGAAAAACATGAGTTGATTGTCCGA
GTGGAGCTGACACAAACCCAGAAGACTTATTATCGTTTGATTTTGACGCA
AAATTTCGAGGTGTTGCGGAAGAAATTCAAGGCGGCGAGTAGTATTTATA
ACATGATTATGCAGTTGAAGAAGGTTTGCAATCACCCTTTCCTGATGAGG
GAGGAAGATTTGTGTTACTCCATGAATGAAAACTACGAAAAGCGAGCGCA
GGCCTTGTTGACTTGCTCGGGAAAATTGGAGTTGTTGGACCGTATGTTAT
TGAGGCTGAAGGAGGGAGGGCACAGGGTGCTCTTATTCTCGCAGATGACC
ACGATGCTAGACTTGCTGGAAGAGCATTTGATGAATCGGGGTTGGAGGTA
CCAGAGGCTTGATGGGTCGACGAAAACTAGTGATCGGCAAGCACGGATTG
ACGCGTATAATCGGGTGTCAAAAGCAGGAGGAGCCGGAGGACGAGCAGGT
GGAGGGGGACGAGAGGAGGATGAGTACTTTATTTTCTTGTTGTCCACGCG
GGCGGGGGGTTTGGGTATCAACTTGACAAGTGCCGACACGGTGATAATTT
ATGATTTAGATTGGAACCCGCACAACGACTTACAAGCGCTGGCAAGAGCG
CATCGAATCGGCCAAACGCGGAAGGTTATGGTGTACCGCTTTTTGACTCG
CAACACAGTCGAAGAAAGGATCTTGCAACTGGCCAAGAAAAAGTTGTTGT
TGGAGCATGTCGTGGTGGGGGAGGCAGGGAGAGGACGCAAGCTCACTCAG
GATGAGCTGGACGATGTCTTGAAATATGGGGCGGAGGAATTGTTTGCGGA
CGAGGAGGAAGAGGAGGGGAAGGAGGGTGAGGGGGGGAGAGGGGCTGCTG
TCGCAGCAGGAGCAGCGGGAGCAGAAACAAGGGGAGAGGAGAAGGAAGCG
GTAAATGCGAAGAAATGGGGGGATGGGGGGACGAGGGGGAAGACAATGAG
GATTTTGTGGGATGATGAGGCGGTCGAACGCTTGTTGGATCGAAACATTG
TTGAGGAAGGGGCAGCGGGGCTAGAGTCGGAGGCCGAGGTAGGGGAAGGA
GGTGCGGAGGGAGAGAAGAGGACAGGAAAGGGATTGTCAGATTTATTTCA
GTCCTTCAAGGTGGCAAAGTTTGCAAGCGTGGAGGATGCGGAGGAGGAGG
CTGCTGCTGCTGTGGCTGCTGTTGCTGCGGTTGCAGCAGACGCGGCGGGG
GCAGAGGAGTTTGAAAGGCTAAGGAGAGAGAAGGCAGAGGCTTTGCTGAA
GGAAACTTTGCCCGAGAATACGACGAAGACTTGGCAGGAGCTTTTGGAAG
CACGGCATGAGAGTCGCCATGTGAAGGAGATGGCGAGGCTAGGGAAAGGG
AAGAGGGAGAGAAAAGAGGCGCAGAGGAGGGAGGGAACGTTTAGTGGACC
TTTGTCTGATTTTTTGTCGGGGTCGGATGGGGGGGGGGAGGAAGGGGAGG
AGGAAGAGGAGGGGGATGAGGATTGGGAGGATGGAGGGGAGGAAGACATG
GAGGATGAGGAGGATTTTGATAATGTTGGAAGTAGAAGTAAGAGGAGGTC
GACTGCTGCAGCGACGGCACAGGTGGGTGTGCCACGCGTGCAAGTTGCAG
GATTCGGGTATGTGCAACGACAGGCTGTTAGGATGTATTTGATGCAGTTT
GGTCTCACAGGAGGAAAGAAGGATGGGAAGAAGGGGAGAAAAGGGGGGGA
ATTCAAGATTTTTTACGATTTGCTCCAGAAGCATGCCCGTGGGAAATTAG
CGGAACGGAGTGAGGAGGAGGTGAGGGCTTACTTGCAGATGCTCTTGGGT
GGTGGTGGTGCTGCTGCTGGGGGGGCTGCGACTGCAACTGCTGGCACTAC
TGCGGCGGTGGGGACGTGTTATATGCAGAGGGATTTGCTCAGGCGTGTAT
CATTGCTTAGGCTTATCGAGGATAAGGTGCTTGAGTACCAGAATCGAGAA
CCGGATTCATTTTTTATTGACGATGGGAAACAGACGGGCTGGTCGAAGGC
CTGCTCGATTACCACCAAAACGTTCAAATTAAATTGGGGAAGGGCAAATG
ATTTGATGTTATTGGAATTGACCCTCAGGCATGGCTATGGGAAGTGGCGC
TCGTTTTTGAAGGATGCCACATTCGTTGCTTCCCTCCCCCCTACGGCTTT
GACGGTGGCGGGGCAGCAGCAGCAACAACAACAGCGATTATCGACCTCGC
CAGTGGGGAGTGGAGAAGGGGATGAATTTGGGGTGTCGGTGCAAGGAAAT
GGGATGCCTAAAGCGATTGCGGCGCTTGCAGGAGCAGGAATAGGAGCAGG
AGCAGCTGTGTCAGGGTCCGTGAATAAATCGCACCGTCGCAAAGGGTACT
CGGACGGACAGGAGAAGCAGCTTTTGTCGATCGTGCAAAAGAGGATGAAG
CTCATGTCCCAAGCCTTGTTCGTCGAAAACCAACGGCTGCAAAGGAAGAT
CGAAGCGATCACACACATTCAATCCCGCGTCTCTGTCCTTATCGCACAGA
AGACAACCGCTGATGAGGTACTCCCTCCCCCCGCTCTCGCCCACCTCCTC
GAGCAACGCCGGCAGTTGCAGCTAAAGGTCCAAGAGGTGTTTGAAGAGCT
GAGGGCCAAGGCACGCTTAGAGACATCGATCAAAGTGATTGAGTTGAATA
AAAGATTAGAAGGGCTGAATGCCAGCGTGCATGATTCATTGCGACGGAAC
CAAGAGTTATTATCAGCCTTGAACAATACCCGGCTTCAGATGGTGGTTGG
CCAGGTGATCACTGAGAGACTGACCCGTCAGACAAAAGACTTCGAGGATA
TCAACCGTGACATCAAAGAGGGCATTCAGGCGACCGCGGATTGCCTTCAG
GAGATGGAACGGGTGATTGAGGGGGCGTACACTGAAGCGGTTACTTATGT
GCCGGTGACGGTAGCACCGGCACCAAGGGCGACTGCACCCAAGGAGGACG
CTGCGATGGTAGACCTTTGTGATTCGGACAATGAGGAAGTGGGAAAGGAG
AGCAGCACTTCTATCGAAAGTCGGGAGGAGAAGAGCAATGGCGACAGTCA
CGTGACTGATGGTGGCAATGGGGTGGCGCCGATGGTTGAGGGGGCGGAGG
GGGAGGGGGCGAGACCCTAGGGCGGGAGTGCAGGG

Coding sequence (CDS) from alignment at scaffold_2:1003491..1009175-

>mRNA_1009 ID=mRNA_1009|Name=jgi.p|Nanoce1779_2|627406|organism=Nannochloropsis oceanica|type=CDS|length=5283bp|location=Sequence derived from alignment at scaffold_2:1003491..1009175- (Nannochloropsis oceanica)
ATGCCGAAGGCAGCGGCTGATGAAAGCAGCGAGGACGAGCTCTGGATCTA
CGATGAGGAGGACGAGGACGAGGCAGCGGAGGAGAGGGACGGGGAAGGGG
AGGAGACCGAGGAGGACGAGGAGTGCAACAAATGCCACGACTTTGGGGAG
CTGATCTTGTGCGACTACTGCCCCAAGGCATACCATGCCAAGTGTGCTGG
CCTGCAGGAGCCCCCGCATGGGAACGCCATTTTTACGTGTGAGGATTGCG
GGATCGACATCTGCGACGCCTGCAAAGCCAGAGAAGCGACAATCCGGTGC
CGGTACTGTCGCCGGGCCTATCACGGCAAATGCGTGCATCGTGTCCCCTC
CCTCAACGATACGTGGCTCTGCGGAGCGTGTATTAAGGACATAGCCACCC
ACCATGGAGTCGAGAAAATACTTTCTGTCCGCCCCTATCGGAAGCTCGCC
CCTGCCGAAGAAGCAAAGCGCCTAGAAGCTTGGGCCGCACTGGCCGTGCA
AGAAAAGGCAGCAGCAGCAGCAGCAACAACAACAACAGGGACAGTAAAAA
CAAGGACAGCACCAGCTGCAGCGGCATCGGTGAGCATCAGCACTAGCAGC
AGTAGCGGCGATGGCAGCACTCCCTCGAAGGCGACTAAAAGGAAGATCAA
ACAGGTCGCGGAGCGGAAGGTGACCGAAGCCGAGTATTTTGTCCGATGGG
TGGGAAAGGCCTTCTGGCATTGCTCCTGGGTGCCTGAATCCTTCCTCGCT
GCCACTAACAAGGCAAAGCTGCGAAATTTTAAACTACGACAGTCAACGTC
TACGCATGCTGTCCATGTACCACAGGAGGCAGCGGAGACGGAGGAGGAAG
AAGTGGTCGAGAGCGCATGGCGGCAGGTGGATCGAATCTTGGACGAACGA
ATGAGCAAGTCATTGGATGGGCGGGTAAAGGTAAAGGAGTGTCTGGTGAA
ATGGCAGGGGTTGGAGTATGATCAATGCACGTGGGAGGTGGAGTCTGATT
TGGTAAGGGAGGGTTTTGAGTCTGCCTTGAGGCATTTCGCAGAGCGAGAC
ACGGATTGGGTCCGCCCCTTATTATCGATGGATGATCCGGCGAGTTTTCG
CAGCACCAGCACCAGCAGTGCCAGCACCAGTGCAAGAATAAGTGGCTACA
AACCGATAAGCGTTCAACCGGGGTGCTTTAAAGGAGGCACTTGGCATGAC
TATCAAGTTGAAGGGATCAACTTTCTGCGCAATTCGTGGTATGCTCGTAA
TAATGTGATCTTGGCGGACGAAATGGGTTTGGGAAAGACTATACAGACCC
TGGGCTTTCTACGGGCGATTGCCACGGAGAAGGTTATGGGGGGAGGTTTT
TTTTTGCCGTTTTTGGTGGTGTGTCCCTTGGCAGTGGTGGATAACTGGGA
AAGGGAGTGTAAGACATGGTGCCCAGAACTGGATGTTGTCGTGTACAAAG
GCTCGCAGGTATCAAGGGAGATGATTCAACGGTATGAGGTGCGGCCGGCG
AGCAGCAGCAGCAGCAGTGCCAGAAACAGCAACGGCAACAATGGCGGTGC
GAGCAAGGCACGGAAGCGACGTAAATTAAGCGGAGGAGAGGAAGAGAAAG
GGAACGGAGAGGGAGAGGAGAAGGAGGGGGAGGCAAGTGGAGTGGCTATG
GATATGGATGTGAGTGGCACGACTGTTGAGGAGGGAAGGGGCAGTAGCAA
CAGCAGTAGCAGCAGCTTGAAACGTCGTCGGTGCGGGAATTCAGAGGAGG
GGAAAATGAACATATACTTCCATGTGTTGATCACTTCGTTTGAGTACGCG
TGGAAGGATGCTGGGTTTTTTAAGAAGGTCACGTGGGAGACTGTAGTTGT
AGATGAGGGCCACCGGCTCAAGGGGGGGGCAACAGGGAAACTCTATCATG
CTCTCAAGGAGATGAAAGTCGGTCATCGAGTGCTTCTGACGGGCACGCCG
CTGCAAAATTCGATTGAGGAACTGTTTAACCTTTTACATTTTTTACAGCC
GGTCAAGTTTTCGGATATCGAAGTGTTCAAGGGGGATTTTGCGTCCATGG
ATAAGGAGGAACAGCTGGGAAAGTTGCATGCTTTGATTGCCCCACACATG
CTGCGACGGATGAAAAAAGATGTGAATTTAGTCATTCCTGAAAAACATGA
GTTGATTGTCCGAGTGGAGCTGACACAAACCCAGAAGACTTATTATCGTT
TGATTTTGACGCAAAATTTCGAGGTGTTGCGGAAGAAATTCAAGGCGGCG
AGTAGTATTTATAACATGATTATGCAGTTGAAGAAGGTTTGCAATCACCC
TTTCCTGATGAGGGAGGAAGATTTGTGTTACTCCATGAATGAAAACTACG
AAAAGCGAGCGCAGGCCTTGTTGACTTGCTCGGGAAAATTGGAGTTGTTG
GACCGTATGTTATTGAGGCTGAAGGAGGGAGGGCACAGGGTGCTCTTATT
CTCGCAGATGACCACGATGCTAGACTTGCTGGAAGAGCATTTGATGAATC
GGGGTTGGAGGTACCAGAGGCTTGATGGGTCGACGAAAACTAGTGATCGG
CAAGCACGGATTGACGCGTATAATCGGGTGTCAAAAGCAGGAGGAGCCGG
AGGACGAGCAGGTGGAGGGGGACGAGAGGAGGATGAGTACTTTATTTTCT
TGTTGTCCACGCGGGCGGGGGGTTTGGGTATCAACTTGACAAGTGCCGAC
ACGGTGATAATTTATGATTTAGATTGGAACCCGCACAACGACTTACAAGC
GCTGGCAAGAGCGCATCGAATCGGCCAAACGCGGAAGGTTATGGTGTACC
GCTTTTTGACTCGCAACACAGTCGAAGAAAGGATCTTGCAACTGGCCAAG
AAAAAGTTGTTGTTGGAGCATGTCGTGGTGGGGGAGGCAGGGAGAGGACG
CAAGCTCACTCAGGATGAGCTGGACGATGTCTTGAAATATGGGGCGGAGG
AATTGTTTGCGGACGAGGAGGAAGAGGAGGGGAAGGAGGGTGAGGGGGGG
AGAGGGGCTGCTGTCGCAGCAGGAGCAGCGGGAGCAGAAACAAGGGGAGA
GGAGAAGGAAGCGGTAAATGCGAAGAAATGGGGGGATGGGGGGACGAGGG
GGAAGACAATGAGGATTTTGTGGGATGATGAGGCGGTCGAACGCTTGTTG
GATCGAAACATTGTTGAGGAAGGGGCAGCGGGGCTAGAGTCGGAGGCCGA
GGTAGGGGAAGGAGGTGCGGAGGGAGAGAAGAGGACAGGAAAGGGATTGT
CAGATTTATTTCAGTCCTTCAAGGTGGCAAAGTTTGCAAGCGTGGAGGAT
GCGGAGGAGGAGGCTGCTGCTGCTGTGGCTGCTGTTGCTGCGGTTGCAGC
AGACGCGGCGGGGGCAGAGGAGTTTGAAAGGCTAAGGAGAGAGAAGGCAG
AGGCTTTGCTGAAGGAAACTTTGCCCGAGAATACGACGAAGACTTGGCAG
GAGCTTTTGGAAGCACGGCATGAGAGTCGCCATGTGAAGGAGATGGCGAG
GCTAGGGAAAGGGAAGAGGGAGAGAAAAGAGGCGCAGAGGAGGGAGGGAA
CGTTTAGTGGACCTTTGTCTGATTTTTTGTCGGGGTCGGATGGGGGGGGG
GAGGAAGGGGAGGAGGAAGAGGAGGGGGATGAGGATTGGGAGGATGGAGG
GGAGGAAGACATGGAGGATGAGGAGGATTTTGATAATGTTGGAAGTAGAA
GTAAGAGGAGGTCGACTGCTGCAGCGACGGCACAGGTGGGTGTGCCACGC
GTGCAAGTTGCAGGATTCGGGTATGTGCAACGACAGGCTGTTAGGATGTA
TTTGATGCAGTTTGGTCTCACAGGAGGAAAGAAGGATGGGAAGAAGGGGA
GAAAAGGGGGGGAATTCAAGATTTTTTACGATTTGCTCCAGAAGCATGCC
CGTGGGAAATTAGCGGAACGGAGTGAGGAGGAGGTGAGGGCTTACTTGCA
GATGCTCTTGGGTGGTGGTGGTGCTGCTGCTGGGGGGGCTGCGACTGCAA
CTGCTGGCACTACTGCGGCGGTGGGGACGTGTTATATGCAGAGGGATTTG
CTCAGGCGTGTATCATTGCTTAGGCTTATCGAGGATAAGGTGCTTGAGTA
CCAGAATCGAGAACCGGATTCATTTTTTATTGACGATGGGAAACAGACGG
GCTGGTCGAAGGCCTGCTCGATTACCACCAAAACGTTCAAATTAAATTGG
GGAAGGGCAAATGATTTGATGTTATTGGAATTGACCCTCAGGCATGGCTA
TGGGAAGTGGCGCTCGTTTTTGAAGGATGCCACATTCGTTGCTTCCCTCC
CCCCTACGGCTTTGACGGTGGCGGGGCAGCAGCAGCAACAACAACAGCGA
TTATCGACCTCGCCAGTGGGGAGTGGAGAAGGGGATGAATTTGGGGTGTC
GGTGCAAGGAAATGGGATGCCTAAAGCGATTGCGGCGCTTGCAGGAGCAG
GAATAGGAGCAGGAGCAGCTGTGTCAGGGTCCGTGAATAAATCGCACCGT
CGCAAAGGGTACTCGGACGGACAGGAGAAGCAGCTTTTGTCGATCGTGCA
AAAGAGGATGAAGCTCATGTCCCAAGCCTTGTTCGTCGAAAACCAACGGC
TGCAAAGGAAGATCGAAGCGATCACACACATTCAATCCCGCGTCTCTGTC
CTTATCGCACAGAAGACAACCGCTGATGAGGTACTCCCTCCCCCCGCTCT
CGCCCACCTCCTCGAGCAACGCCGGCAGTTGCAGCTAAAGGTCCAAGAGG
TGTTTGAAGAGCTGAGGGCCAAGGCACGCTTAGAGACATCGATCAAAGTG
ATTGAGTTGAATAAAAGATTAGAAGGGCTGAATGCCAGCGTGCATGATTC
ATTGCGACGGAACCAAGAGTTATTATCAGCCTTGAACAATACCCGGCTTC
AGATGGTGGTTGGCCAGGTGATCACTGAGAGACTGACCCGTCAGACAAAA
GACTTCGAGGATATCAACCGTGACATCAAAGAGGGCATTCAGGCGACCGC
GGATTGCCTTCAGGAGATGGAACGGGTGATTGAGGGGGCGTACACTGAAG
CGGTTACTTATGTGCCGGTGACGGTAGCACCGGCACCAAGGGCGACTGCA
CCCAAGGAGGACGCTGCGATGGTAGACCTTTGTGATTCGGACAATGAGGA
AGTGGGAAAGGAGAGCAGCACTTCTATCGAAAGTCGGGAGGAGAAGAGCA
ATGGCGACAGTCACGTGACTGATGGTGGCAATGGGGTGGCGCCGATGGTT
GAGGGGGCGGAGGGGGAGGGGGCGAGACCCTAG

Synonyms

Publications