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Properties
| Property Name | Value |
|---|
| TranscriptId | 608619 |
| Track | FilteredModels2 |
| ProteinId | 608533 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_42 | supercontig | scaffold_42:29009..31038 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_10009 ID=mRNA_10009|Name=jgi.p|Nanoce1779_2|608533|organism=Nannochloropsis oceanica|type=mRNA|length=1903bp
GCTGGCACAGATGTACGGTCCCTAGGAGAAATGTGCGGCACCAAATACAG
AAGCAAACGTTTTCTCTTTTCTTACTTTGTGACTGATTCGCTGCCAACCC
AAGCAGCATGTCCACACATTTTTTGGGTCGCTTATCGTCGTCCTTGATGG
GTCTTCGGACAGGTCGTGCGGATACTTTGGCGTGGGCTACCCGACATCGC
CTACCCCACCGCCGGCCCTACCACGTCTATGTCGCCCTTGGCAGCAATCT
GGGGGATCGGGCGCTTAATCTACAGCGAGCCGTGGAGGCACTCAATGAGC
CCACCCTGGGCCACGTCCAAGCCACCTCGGGCCTCTTTGAGTCCAAAGCC
CAGTATGTGACGGAGCAACCCGACTTTCTCAATGCTGTCTGTAGGATTCA
GACGCTTCTCCCTCCCCTGGCCCTCCTCTCTCGCCTCCAAGAGATTGAGA
AGATGCTTGGCCGGGTAAAAGGCACTCAGCGCTTCGGTCCCAGAACCTTG
GACTTGGACATTCTCTACTACCATGAAGATGACGATCCGTCTAAGCCTAT
CACCTTCGAGAAGCACGGCGAGAAAAAGGGCTCCGAGGAAGGGTCGCTTT
TCGTGCCGCACGTCCGATTGCATGAGCGAGAGTTTGTGTTGCGTCCATTG
GCGGAGCTGGCGCCCTCCCTCCGTCATCCCTCACAAGAGCAGATCACTGT
AAAAGAAATGCTACGGGCTTGTGCTCGGAGCCGCTCAGAGGATACACCAC
CCTTGGTAAGGAAGGGAAGCCTGCTGCTGCCCCTCGACCCGGCGCATAAT
AAGACCTCCACAGTAGTGATGGGCATTCTGAATGCTACCCCTGACAGCTT
TAGTGACGGAGGGATCGATGCAGAGAGCGTGGAGGCAGCTGTGGAGAGGG
CCGTGCGGATGCGGGAGGAGGGGGCCGGGATCATTGACATAGGGGGTGAG
TCGACGAGGCCTGGGGCCGATGAAGTGGGAGAGGAGGAGGAGCTCCGGCG
AGTGGTGCCTATCATTCAGGGAATTCGCGCGCATGACAAAGACACGCTGC
TTTCGATTGATACAAGGAGAGCAGGGGTGGCCCGAGCAGCGGTGGAGGCG
GGGGTGGACATCGTTAATGATGTGTCCGGGGGAGGGTTTGATTCAAAAAT
GTTGGCAACAGTCGCGGCATTGGATGTGCCCTACATAATTATGCACATGC
GGGGTACTCCCCAGACGATGATGCAGAGACAGCACAGTACATACAATGAG
GATGCTGTGGAAGAGGTATGTGGGGAGCTGTGGGGGGCGGTGGGGAGGGC
GGAGGAGGAGGGAGTGAGGAGATGGTCGATGCTGGTGGACCCGGGCATTG
GGTTTGCCAAAGGCCTGGAGGTGAACATGGCCTTGCTGCGAGGATTGGAC
TGTGTGTGTGAAAGGATGGTAGGGCTTCCGGTGCTAGTGGGGGTCAGTCG
AAAGAAATTTTTGGGCACACTGTGCGACGAGCCGAGGGCAGAGGAGAGGG
ACGTGATGACGAGCGTGGTGAATGCGGTGGCTATTTCGCGAGGGGCGGCG
ATGGTGCGTGTGCACAACGTGCCCATGGCCGTTCAGACCGTACGGTTGGC
GGATTCGTTGCGTAAATGACGGTAAAGCGGTCGCGGATGAGATGATTGGG
GAACGTGGTAGATGGGAGAAAAATGAAGCAAATAATATAAATTAGATGGA
TGAGGAATTGTTTATCTGGGCTCACCCGACATTGCAATTTTTCCTCCATT
TTTTCGTTGATGCAGCCCCATGGAAGGATCACCAAGTGTCGAGAAGGATT
CCCACTTAATGGAGGTCATCAAGTGAGAGGATGAGAACCAGCCATTCGCG
ATACAGAATCATGGGAACATTTCATACTCCACTAATTTTCTTGAACACAA
TAC back to topprotein sequence of jgi.p|Nanoce1779_2|608533 >mRNA_10009-protein ID=mRNA_10009-protein|Name=jgi.p|Nanoce1779_2|608533|organism=Nannochloropsis oceanica|type=polypeptide|length=504bp
MSTHFLGRLSSSLMGLRTGRADTLAWATRHRLPHRRPYHVYVALGSNLGD
RALNLQRAVEALNEPTLGHVQATSGLFESKAQYVTEQPDFLNAVCRIQTL
LPPLALLSRLQEIEKMLGRVKGTQRFGPRTLDLDILYYHEDDDPSKPITF
EKHGEKKGSEEGSLFVPHVRLHEREFVLRPLAELAPSLRHPSQEQITVKE
MLRACARSRSEDTPPLVRKGSLLLPLDPAHNKTSTVVMGILNATPDSFSD
GGIDAESVEAAVERAVRMREEGAGIIDIGGESTRPGADEVGEEEELRRVV
PIIQGIRAHDKDTLLSIDTRRAGVARAAVEAGVDIVNDVSGGGFDSKMLA
TVAALDVPYIIMHMRGTPQTMMQRQHSTYNEDAVEEVCGELWGAVGRAEE
EGVRRWSMLVDPGIGFAKGLEVNMALLRGLDCVCERMVGLPVLVGVSRKK
FLGTLCDEPRAEERDVMTSVVNAVAISRGAAMVRVHNVPMAVQTVRLADS
LRK* back to topmRNA from alignment at scaffold_42:29009..31038- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_10009 ID=mRNA_10009|Name=jgi.p|Nanoce1779_2|608533|organism=Nannochloropsis oceanica|type=mRNA|length=2030bp|location=Sequence derived from alignment at scaffold_42:29009..31038- (Nannochloropsis oceanica)
GCTGGCACAGATGTACGGTCCCTAGGAGAAATGTGCGGCACCAAATACAG
AAGCAAACGTTTTCTCTTTTCTTACTTTGTGACTGATTCGCTGCCAACCC
AAGCAGCATGTCCACACATTTTTTGGGTCGCTTATCGTCGTCCTTGATGG
GTCTTCGGACAGGTCGTGCGGATACTTTGGCGTGGGCTACCCGACATCGC
CTACCCCACCGCCGGCCCTACCACGTCTATGTCGCCCTTGGCAGCAATCT
GGGGGATCGGGCGCTTAATCTACAGCGAGCCGTGGAGGCACTCAATGAGG
TAAGGATTTGTTCGGTGTTGGTTTGACCCTTGACCCTTCCTTCCCTTTCT
TAGAAACCTCAAAAACCTCCCCACTTCCAAACATAGCCCACCCTGGGCCA
CGTCCAAGCCACCTCGGGCCTCTTTGAGTCCAAAGCCCAGTATGTGACGG
AGCAACCCGACTTTCTCAATGCTGTCTGTAGGATTCAGACGCTTCTCCCT
CCCCTGGCCCTCCTCTCTCGCCTCCAAGAGATTGAGAAGATGCTTGGCCG
GGTAAAAGGCACTCAGCGCTTCGGTCCCAGAACCTTGGACTTGGACATTC
TCTACTACCATGAAGATGACGATCCGTCTAAGCCTATCACCTTCGAGAAG
CACGGCGAGAAAAAGGGCTCCGAGGAAGGGTCGCTTTTCGTGCCGCACGT
CCGATTGCATGAGCGAGAGTTTGTGTTGCGTCCATTGGCGGAGCTGGCGC
CCTCCCTCCGTCATCCCTCACAAGAGCAGATCACTGTAAAAGAAATGCTA
CGGGCTTGTGCTCGGAGCCGCTCAGAGGATACACCACCCTTGGTAAGGGT
GTTGCCATTGAAAAGGCGGAGGGGGGGGGGGGAGGGAGAAGGGAAGCCTG
CTGCTGCCCCTCGACCCGGCGCATAATAAGACCTCCACAGTAGTGATGGG
CATTCTGAATGCTACCCCTGACAGCTTTAGTGACGGAGGGATCGATGCAG
AGAGCGTGGAGGCAGCTGTGGAGAGGGCCGTGCGGATGCGGGAGGAGGGG
GCCGGGATCATTGACATAGGGGGTGAGTCGACGAGGCCTGGGGCCGATGA
AGTGGGAGAGGAGGAGGAGCTCCGGCGAGTGGTGCCTATCATTCAGGGAA
TTCGCGCGCATGACAAAGACACGCTGCTTTCGATTGATACAAGGAGAGCA
GGGGTGGCCCGAGCAGCGGTGGAGGCGGGGGTGGACATCGTTAATGATGT
GTCCGGGGGAGGGTTTGATTCAAAAATGTTGGCAACAGTCGCGGCATTGG
ATGTGCCCTACATAATTATGCACATGCGGGGTACTCCCCAGACGATGATG
CAGAGACAGCACAGTACATACAATGAGGATGCTGTGGAAGAGGTATGTGG
GGAGCTGTGGGGGGCGGTGGGGAGGGCGGAGGAGGAGGGAGTGAGGAGAT
GGTCGATGCTGGTGGACCCGGGCATTGGGTTTGCCAAAGGCCTGGAGGTG
AACATGGCCTTGCTGCGAGGATTGGACTGTGTGTGTGAAAGGATGGTAGG
GCTTCCGGTGCTAGTGGGGGTCAGTCGAAAGAAATTTTTGGGCACACTGT
GCGACGAGCCGAGGGCAGAGGAGAGGGACGTGATGACGAGCGTGGTGAAT
GCGGTGGCTATTTCGCGAGGGGCGGCGATGGTGCGTGTGCACAACGTGCC
CATGGCCGTTCAGACCGTACGGTTGGCGGATTCGTTGCGTAAATGACGGT
AAAGCGGTCGCGGATGAGATGATTGGGGAACGTGGTAGATGGGAGAAAAA
TGAAGCAAATAATATAAATTAGATGGATGAGGAATTGTTTATCTGGGCTC
ACCCGACATTGCAATTTTTCCTCCATTTTTTCGTTGATGCAGCCCCATGG
AAGGATCACCAAGTGTCGAGAAGGATTCCCACTTAATGGAGGTCATCAAG
TGAGAGGATGAGAACCAGCCATTCGCGATACAGAATCATGGGAACATTTC
ATACTCCACTAATTTTCTTGAACACAATAC back to topCoding sequence (CDS) from alignment at scaffold_42:29009..31038- >mRNA_10009 ID=mRNA_10009|Name=jgi.p|Nanoce1779_2|608533|organism=Nannochloropsis oceanica|type=CDS|length=4536bp|location=Sequence derived from alignment at scaffold_42:29009..31038- (Nannochloropsis oceanica)
AAGGGAAGCCTGCTGCTGCCCCTCGACCCGGCGCATAATAAGACCTCCAC
AGTAGTGATGGGCATTCTGAATGCTACCCCTGACAGCTTTAGTGACGGAG
GGATCGATGCAGAGAGCGTGGAGGCAGCTGTGGAGAGGGCCGTGCGGATG
CGGGAGGAGGGGGCCGGGATCATTGACATAGGGGGTGAGTCGACGAGGCC
TGGGGCCGATGAAGTGGGAGAGGAGGAGGAGCTCCGGCGAGTGGTGCCTA
TCATTCAGGGAATTCGCGCGCATGACAAAGACACGCTGCTTTCGATTGAT
ACAAGGAGAGCAGGGGTGGCCCGAGCAGCGGTGGAGGCGGGGGTGGACAT
CGTTAATGATGTGTCCGGGGGAGGGTTTGATTCAAAAATGTTGGCAACAG
TCGCGGCATTGGATGTGCCCTACATAATTATGCACATGCGGGGTACTCCC
CAGACGATGATGCAGAGACAGCACAGTACATACAATGAGGATGCTGTGGA
AGAGGTATGTGGGGAGCTGTGGGGGGCGGTGGGGAGGGCGGAGGAGGAGG
GAGTGAGGAGATGGTCGATGCTGGTGGACCCGGGCATTGGGTTTGCCAAA
GGCCTGGAGGTGAACATGGCCTTGCTGCGAGGATTGGACTGTGTGTGTGA
AAGGATGGTAGGGCTTCCGGTGCTAGTGGGGGTCAGTCGAAAGAAATTTT
TGGGCACACTGTGCGACGAGCCGAGGGCAGAGGAGAGGGACGTGATGACG
AGCGTGGTGAATGCGGTGGCTATTTCGCGAGGGGCGGCGATGGTGCGTGT
GCACAACGTGCCCATGGCCGTTCAGACCGTACGGTTGGCGGATTCGTTGC
GTAAATGACCCACCCTGGGCCACGTCCAAGCCACCTCGGGCCTCTTTGAG
TCCAAAGCCCAGTATGTGACGGAGCAACCCGACTTTCTCAATGCTGTCTG
TAGGATTCAGACGCTTCTCCCTCCCCTGGCCCTCCTCTCTCGCCTCCAAG
AGATTGAGAAGATGCTTGGCCGGGTAAAAGGCACTCAGCGCTTCGGTCCC
AGAACCTTGGACTTGGACATTCTCTACTACCATGAAGATGACGATCCGTC
TAAGCCTATCACCTTCGAGAAGCACGGCGAGAAAAAGGGCTCCGAGGAAG
GGTCGCTTTTCGTGCCGCACGTCCGATTGCATGAGCGAGAGTTTGTGTTG
CGTCCATTGGCGGAGCTGGCGCCCTCCCTCCGTCATCCCTCACAAGAGCA
GATCACTGTAAAAGAAATGCTACGGGCTTGTGCTCGGAGCCGCTCAGAGG
ATACACCACCCTTGGTAAGGATGTCCACACATTTTTTGGGTCGCTTATCG
TCGTCCTTGATGGGTCTTCGGACAGGTCGTGCGGATACTTTGGCGTGGGC
TACCCGACATCGCCTACCCCACCGCCGGCCCTACCACGTCTATGTCGCCC
TTGGCAGCAATCTGGGGGATCGGGCGCTTAATCTACAGCGAGCCGTGGAG
GCACTCAATGAGAAGGGAAGCCTGCTGCTGCCCCTCGACCCGGCGCATAA
TAAGACCTCCACAGTAGTGATGGGCATTCTGAATGCTACCCCTGACAGCT
TTAGTGACGGAGGGATCGATGCAGAGAGCGTGGAGGCAGCTGTGGAGAGG
GCCGTGCGGATGCGGGAGGAGGGGGCCGGGATCATTGACATAGGGGGTGA
GTCGACGAGGCCTGGGGCCGATGAAGTGGGAGAGGAGGAGGAGCTCCGGC
GAGTGGTGCCTATCATTCAGGGAATTCGCGCGCATGACAAAGACACGCTG
CTTTCGATTGATACAAGGAGAGCAGGGGTGGCCCGAGCAGCGGTGGAGGC
GGGGGTGGACATCGTTAATGATGTGTCCGGGGGAGGGTTTGATTCAAAAA
TGTTGGCAACAGTCGCGGCATTGGATGTGCCCTACATAATTATGCACATG
CGGGGTACTCCCCAGACGATGATGCAGAGACAGCACAGTACATACAATGA
GGATGCTGTGGAAGAGGTATGTGGGGAGCTGTGGGGGGCGGTGGGGAGGG
CGGAGGAGGAGGGAGTGAGGAGATGGTCGATGCTGGTGGACCCGGGCATT
GGGTTTGCCAAAGGCCTGGAGGTGAACATGGCCTTGCTGCGAGGATTGGA
CTGTGTGTGTGAAAGGATGGTAGGGCTTCCGGTGCTAGTGGGGGTCAGTC
GAAAGAAATTTTTGGGCACACTGTGCGACGAGCCGAGGGCAGAGGAGAGG
GACGTGATGACGAGCGTGGTGAATGCGGTGGCTATTTCGCGAGGGGCGGC
GATGGTGCGTGTGCACAACGTGCCCATGGCCGTTCAGACCGTACGGTTGG
CGGATTCGTTGCGTAAATGACCCACCCTGGGCCACGTCCAAGCCACCTCG
GGCCTCTTTGAGTCCAAAGCCCAGTATGTGACGGAGCAACCCGACTTTCT
CAATGCTGTCTGTAGGATTCAGACGCTTCTCCCTCCCCTGGCCCTCCTCT
CTCGCCTCCAAGAGATTGAGAAGATGCTTGGCCGGGTAAAAGGCACTCAG
CGCTTCGGTCCCAGAACCTTGGACTTGGACATTCTCTACTACCATGAAGA
TGACGATCCGTCTAAGCCTATCACCTTCGAGAAGCACGGCGAGAAAAAGG
GCTCCGAGGAAGGGTCGCTTTTCGTGCCGCACGTCCGATTGCATGAGCGA
GAGTTTGTGTTGCGTCCATTGGCGGAGCTGGCGCCCTCCCTCCGTCATCC
CTCACAAGAGCAGATCACTGTAAAAGAAATGCTACGGGCTTGTGCTCGGA
GCCGCTCAGAGGATACACCACCCTTGGTAAGGATGTCCACACATTTTTTG
GGTCGCTTATCGTCGTCCTTGATGGGTCTTCGGACAGGTCGTGCGGATAC
TTTGGCGTGGGCTACCCGACATCGCCTACCCCACCGCCGGCCCTACCACG
TCTATGTCGCCCTTGGCAGCAATCTGGGGGATCGGGCGCTTAATCTACAG
CGAGCCGTGGAGGCACTCAATGAGAAGGGAAGCCTGCTGCTGCCCCTCGA
CCCGGCGCATAATAAGACCTCCACAGTAGTGATGGGCATTCTGAATGCTA
CCCCTGACAGCTTTAGTGACGGAGGGATCGATGCAGAGAGCGTGGAGGCA
GCTGTGGAGAGGGCCGTGCGGATGCGGGAGGAGGGGGCCGGGATCATTGA
CATAGGGGGTGAGTCGACGAGGCCTGGGGCCGATGAAGTGGGAGAGGAGG
AGGAGCTCCGGCGAGTGGTGCCTATCATTCAGGGAATTCGCGCGCATGAC
AAAGACACGCTGCTTTCGATTGATACAAGGAGAGCAGGGGTGGCCCGAGC
AGCGGTGGAGGCGGGGGTGGACATCGTTAATGATGTGTCCGGGGGAGGGT
TTGATTCAAAAATGTTGGCAACAGTCGCGGCATTGGATGTGCCCTACATA
ATTATGCACATGCGGGGTACTCCCCAGACGATGATGCAGAGACAGCACAG
TACATACAATGAGGATGCTGTGGAAGAGGTATGTGGGGAGCTGTGGGGGG
CGGTGGGGAGGGCGGAGGAGGAGGGAGTGAGGAGATGGTCGATGCTGGTG
GACCCGGGCATTGGGTTTGCCAAAGGCCTGGAGGTGAACATGGCCTTGCT
GCGAGGATTGGACTGTGTGTGTGAAAGGATGGTAGGGCTTCCGGTGCTAG
TGGGGGTCAGTCGAAAGAAATTTTTGGGCACACTGTGCGACGAGCCGAGG
GCAGAGGAGAGGGACGTGATGACGAGCGTGGTGAATGCGGTGGCTATTTC
GCGAGGGGCGGCGATGGTGCGTGTGCACAACGTGCCCATGGCCGTTCAGA
CCGTACGGTTGGCGGATTCGTTGCGTAAATGACCCACCCTGGGCCACGTC
CAAGCCACCTCGGGCCTCTTTGAGTCCAAAGCCCAGTATGTGACGGAGCA
ACCCGACTTTCTCAATGCTGTCTGTAGGATTCAGACGCTTCTCCCTCCCC
TGGCCCTCCTCTCTCGCCTCCAAGAGATTGAGAAGATGCTTGGCCGGGTA
AAAGGCACTCAGCGCTTCGGTCCCAGAACCTTGGACTTGGACATTCTCTA
CTACCATGAAGATGACGATCCGTCTAAGCCTATCACCTTCGAGAAGCACG
GCGAGAAAAAGGGCTCCGAGGAAGGGTCGCTTTTCGTGCCGCACGTCCGA
TTGCATGAGCGAGAGTTTGTGTTGCGTCCATTGGCGGAGCTGGCGCCCTC
CCTCCGTCATCCCTCACAAGAGCAGATCACTGTAAAAGAAATGCTACGGG
CTTGTGCTCGGAGCCGCTCAGAGGATACACCACCCTTGGTAAGGATGTCC
ACACATTTTTTGGGTCGCTTATCGTCGTCCTTGATGGGTCTTCGGACAGG
TCGTGCGGATACTTTGGCGTGGGCTACCCGACATCGCCTACCCCACCGCC
GGCCCTACCACGTCTATGTCGCCCTTGGCAGCAATCTGGGGGATCGGGCG
CTTAATCTACAGCGAGCCGTGGAGGCACTCAATGAG back to top
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