jgi.p|Nanoce1779_2|608533, gene_10009 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|608533
Unique Namegene_10009
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_42:29009..31038 -

Link to JBrowse

Properties
Property NameValue
TranscriptId608619
ProteinId608533
Product nameputative folic acid synthesis protein fol1
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_42supercontigscaffold_42:29009..31038 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0044237cellular metabolic process
GO:0009396folic acid-containing compound biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:00038482-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
GO:0004156dihydropteroate synthase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL062ncniL062Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO23G01830NO23G01830Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|608533mRNA_10009-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|608533mRNA_10009Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|608533

>mRNA_10009-protein ID=mRNA_10009-protein|Name=jgi.p|Nanoce1779_2|608533|organism=Nannochloropsis oceanica|type=polypeptide|length=504bp
MSTHFLGRLSSSLMGLRTGRADTLAWATRHRLPHRRPYHVYVALGSNLGD
RALNLQRAVEALNEPTLGHVQATSGLFESKAQYVTEQPDFLNAVCRIQTL
LPPLALLSRLQEIEKMLGRVKGTQRFGPRTLDLDILYYHEDDDPSKPITF
EKHGEKKGSEEGSLFVPHVRLHEREFVLRPLAELAPSLRHPSQEQITVKE
MLRACARSRSEDTPPLVRKGSLLLPLDPAHNKTSTVVMGILNATPDSFSD
GGIDAESVEAAVERAVRMREEGAGIIDIGGESTRPGADEVGEEEELRRVV
PIIQGIRAHDKDTLLSIDTRRAGVARAAVEAGVDIVNDVSGGGFDSKMLA
TVAALDVPYIIMHMRGTPQTMMQRQHSTYNEDAVEEVCGELWGAVGRAEE
EGVRRWSMLVDPGIGFAKGLEVNMALLRGLDCVCERMVGLPVLVGVSRKK
FLGTLCDEPRAEERDVMTSVVNAVAISRGAAMVRVHNVPMAVQTVRLADS
LRK*
back to top
Synonyms
Publications