NO28G01650.4, NO28G01650.4 (mRNA) Nannochloropsis oceanica

Overview
NameNO28G01650.4
Unique NameNO28G01650.4
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1455
Alignment locationchr28:515699..518266 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr28genomechr28:515699..518266 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO28G01650.4 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO28G01650NO28G01650Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO28G01650.4NO28G01650.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO28G01650.4.cds1NO28G01650.4.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO28G01650.4.cds2NO28G01650.4.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO28G01650.4.cds3NO28G01650.4.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO28G01650.4.cds4NO28G01650.4.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO28G01650.4.cds5NO28G01650.4.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO28G01650.4 ID=NO28G01650.4|Name=NO28G01650.4|organism=Nannochloropsis oceanica|type=mRNA|length=1455bp
ACCACAGCCAGAGTTACGCGGTAGCCTACACATCACATTTTACTTTCCCG
CCTCGACGGAAATGTCAGCGCACTACGGCGATAAGTGTGCCTTGTGCGGG
AAGAACGACTTCCTGCCGCTCAACGGACAACGTCACCATCGCTCGTCCCG
AGGCAGTGGGCTTAGGCAAAGCTCTGGCTGACGAAATGGCTGATGTTGCT
CGCCGCTTTGAGGGGAAGGGCGAGTGGTCGCAGAAGGTGCACATCCGAGT
CAAGGGTAGCGGTGCCGCACTAGCTTCTTCCTTCCAAAAAGAAAACAAAT
TTCTTCGAGCTTACCGGGCAAAGGCGAAGGGAGGGAGAAGCAACAGCAAA
GGCCAGCGCATGTCGGACACGGTGCGCCGAATGCTGATGAAGGGAAAAGC
GGGAGGGAGGAGCGGCCTGCACCAGGACGATCGTTTTTATCTCGAGGTAA
GTAGGCAGGGAGGGAGGGAGGGAGAGGGGAAGGAAGGGAAAGAGGAGGGG
GTAGCATCTGACAAGTCTTTACGTTCCCTGTGTTCAAAGATACGCTTTGG
GGGCCTCCTCATTGGAGAGGATGGCACCTCCTCCTCCCCCTCCTCCTCCC
CCTCCTCGCCATCGTCGTCTTCTTCTTGTCCACCACTTGAGGTGGTAGAC
TACATCTTTGTCTCTCGGTTGTGGACCCTCGGAAGAACTCTCGATGAGGC
GGTGGGGAAGCACCAGGCCGCGCTGCGAAAAGTCTATCCTCCCTCTCCTT
CTTCTCCTTCCCACAAGCCCTCCCCTACTTCCTACACCTTCCTGAATGAG
CGCACTGGCCTCTCCCTCCATCCTTTCCTCGGCCGCTCCCTCCTCGACCT
CGCTTCGGCCAAGCTCGTCGATGACTATGAGTCTCTCATCCTTCTTCCTT
TCAGTGAAGAGGGGGGGAAAGAAGAGGGAGAAAATGAGGGAGCGAAAGAG
GGAGAGGCTGCTGCGAGAGAAGGAGGGGAGGAAGGAGAGAAGGAAGGGAC
AACAATGACAAAAACAGCAGCAGAAGCGGTAGCAGTAGCTACCCAAAAAT
CAAAGACGATCACAGCGGCAGTGGCAGCAGCAGTAGAGCCAATGAGCACA
GAGGTAGAAGACGGACAGAGTGAAGGGAAAGGAGAAGCTTCCCTTCCTCC
ATCTCTCACCTTGTACATCACCCAAGGTTCCTCTGTCTCTCACCCTCTCG
TCTTTCCCTTGTCCGAGTGGCCCTCCCTATGTACCTCTGACCTACAAGAA
CGTGTGTGGACTGCTACAGGAATTAGACCTGAGCGGCAAAAATTGTTGTT
CAAGGGCGTGATGGAGGGGGGAGGAAAGAAACTCTGTGAATGGAAAGGCC
TCCGAGACGGGAGCAAGATCACTCTCATGACGAAGAAGTAAAAAGGACCA
GACGACGAACGAAAGGGAATGAGATGCGCGCCGCACATGTGCATTCTTTT
GGAGG
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protein sequence of NO28G01650.4

>NO28G01650.4-protein ID=NO28G01650.4-protein|Name=NO28G01650.4|organism=Nannochloropsis oceanica|type=polypeptide|length=402bp
MADVARRFEGKGEWSQKVHIRVKGSGAALASSFQKENKFLRAYRAKAKGG
RSNSKGQRMSDTVRRMLMKGKAGGRSGLHQDDRFYLEVSRQGGREGEGKE
GKEEGVASDKSLRSLCSKIRFGGLLIGEDGTSSSPSSSPSSPSSSSSCPP
LEVVDYIFVSRLWTLGRTLDEAVGKHQAALRKVYPPSPSSPSHKPSPTSY
TFLNERTGLSLHPFLGRSLLDLASAKLVDDYESLILLPFSEEGGKEEGEN
EGAKEGEAAAREGGEEGEKEGTTMTKTAAEAVAVATQKSKTITAAVAAAV
EPMSTEVEDGQSEGKGEASLPPSLTLYITQGSSVSHPLVFPLSEWPSLCT
SDLQERVWTATGIRPERQKLLFKGVMEGGGKKLCEWKGLRDGSKITLMTK
K*
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mRNA from alignment at chr28:515699..518266-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO28G01650.4 ID=NO28G01650.4|Name=NO28G01650.4|organism=Nannochloropsis oceanica|type=mRNA|length=2568bp|location=Sequence derived from alignment at chr28:515699..518266- (Nannochloropsis oceanica)
ACCACAGCCAGAGTTACGCGGTAGCCTACACATCACATTTTACTTTCCCG
CCTCGACGGAAATGTCAGCGCACTACGGCGATAAGTGTGCCTTGTGCGGG
AAGAACGACTTCCTGCCGCTCAAGTGCGTTGTGGGGAGTTACGGAGGGAG
GGCAGGGAGGGAGGGCAGGGAGGGAGGGCAGTGAAGGGAAGGAGGAAGAG
GTACAAAGGGTCTACAGATGCACTGCATGGACGCGTCGCACATGCTCTTA
TACATTCATTTTCCGAACATTTTTGTTTTCGTTATGTGCATAGGTGTGAT
TTGTGCGCACTTCTTCTTTGCACGGAACATATGGCCCCGTTTGCACACCC
CTGCGCGGGGCGGGGTGAGCAGAGAGGGGAGAATGGGAGAGGGAGGGGAG
GGGGGCATAGAGCTTGAGTCAGAGAGGCGGAATAGCAAGTGAAATGAAAG
CTTCTGGATATTGTCTATGCATGCGTAGGGCCTTTGCGCTCGCTTCTTCC
CACCCATTTCTTCCCTCCCTCTTACCCTCCCTCCCTCCCTCCCTCCCTTT
TTCCGCAGCGGACAACGTCACCATCGCTCGTCCCGAGGCAGTGGGCTTAG
GCAAAGCTCTGGCTGACGAAATGGCTGATGTTGCTCGCCGCTTTGAGGGG
AAGGGCGAGGTAAGGAACGAGGGAGTGAAGGAGGAAGAGGAAGGGAGGGA
GGGAGGGGGGTAGGACCTCTCCCAGGCATCCTCCCTACGCAAATTGAACT
TCATCCCTCCCTCTCTCCCTCCCTCCCTCCCTTCTTCCCTCCCTCCCCCC
GTCTCCAGTGGTCGCAGAAGGTGCACATCCGAGTCAAGGGTAGCGGTGCC
GCACTAGCTTCTTCCTTCCAAAAAGAAAACAAATTTCTTCGAGCTTACCG
GGCAAAGGCGAAGGGAGGTAGGGAGGGAGGGAGGGGGGGAGAGAAGGAGA
GAGGGGATCAGAAAGGGAGGAAAGGAGGAGTTAGAGAGGAAGGGAGGGAG
GGAATGAGAGAGGGATGGCATAAAGGATGCTTTCATCCACCTCACCCATC
CAACTTTCATTTCTTTCCTCCCTTCCTTCCTCGGCTGAGAATGCTCTTCT
GTGTCTGTCAAAGATGTCCACTATTTCTCTCTCCCCCCCTTCCTCCCTCC
CTTTCTCTCTCCCTCCCTTCCTCCTCAGGGAGAAGCAACAGCAAAGGCCA
GCGCATGTCGGACACGGTGCGCCGAATGCTGATGAAGGGAAAAGCGGGAG
GGAGGAGCGGCCTGCACCAGGACGATCGTTTTTATCTCGAGGTAAGTAGG
CAGGGAGGGAGGGAGGGAGAGGGGAAGGAAGGGAAAGAGGAGGGGGTAGC
ATCTGACAAGTCTTTACGTTCCCTGTGTTCAAAGATACGCTTTGGGGGCC
TCCTCATTGGAGAGGATGGCACCTCCTCCTCCCCCTCCTCCTCCCCCTCC
TCGCCATCGTCGTCTTCTTCTTGTCCACCACTTGAGGTACGCTCAACTTT
TAAAACGCTATGCACATACGCACCACTCCCCTCCCTCCTTTCCTCCTTCC
TTCCCCCTCCTTCCCCTCCTCCCCTCCTTGTGACAAGGCACCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCCCCCCCAGGTGGTAGACTACATCTTT
GTCTCTCGGTTGTGGACCCTCGGAAGAACTCTCGATGAGGCGGTGGGGAA
GCACCAGGCCGCGCTGCGAAAAGTCTATCCTCCCTCTCCTTCTTCTCCTT
CCCACAAGGTGAGTGGCGAGCCCTGCCTTCCCTCCATCCCTCCCTCCCTT
CCTTCCTTCTTCCCTCCCCTGCGTGAACCTCGATTCTGCCGATAAATACA
ACCTCCCCCCCTCCTTCCCTACGTCCCTAGCCCTCCCCTACTTCCTACAC
CTTCCTGAATGAGCGCACTGGCCTCTCCCTCCATCCTTTCCTCGGCCGCT
CCCTCCTCGACCTCGCTTCGGCCAAGCTCGTCGATGACTATGAGTCTCTC
ATCCTTCTTCCTTTCAGTGAAGAGGGGGGGAAAGAAGAGGGAGAAAATGA
GGGAGCGAAAGAGGGAGAGGCTGCTGCGAGAGAAGGAGGGGAGGAAGGAG
AGAAGGAAGGGACAACAATGACAAAAACAGCAGCAGAAGCGGTAGCAGTA
GCTACCCAAAAATCAAAGACGATCACAGCGGCAGTGGCAGCAGCAGTAGA
GCCAATGAGCACAGAGGTAGAAGACGGACAGAGTGAAGGGAAAGGAGAAG
CTTCCCTTCCTCCATCTCTCACCTTGTACATCACCCAAGGTTCCTCTGTC
TCTCACCCTCTCGTCTTTCCCTTGTCCGAGTGGCCCTCCCTATGTACCTC
TGACCTACAAGAACGTGTGTGGACTGCTACAGGAATTAGACCTGAGCGGC
AAAAATTGTTGTTCAAGGGCGTGATGGAGGGGGGAGGAAAGAAACTCTGT
GAATGGAAAGGCCTCCGAGACGGGAGCAAGATCACTCTCATGACGAAGAA
GTAAAAAGGACCAGACGACGAACGAAAGGGAATGAGATGCGCGCCGCACA
TGTGCATTCTTTTGGAGG
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Coding sequence (CDS) from alignment at chr28:515699..518266-

>NO28G01650.4 ID=NO28G01650.4|Name=NO28G01650.4|organism=Nannochloropsis oceanica|type=CDS|length=1206bp|location=Sequence derived from alignment at chr28:515699..518266- (Nannochloropsis oceanica)
ATGGCTGATGTTGCTCGCCGCTTTGAGGGGAAGGGCGAGTGGTCGCAGAA
GGTGCACATCCGAGTCAAGGGTAGCGGTGCCGCACTAGCTTCTTCCTTCC
AAAAAGAAAACAAATTTCTTCGAGCTTACCGGGCAAAGGCGAAGGGAGGG
AGAAGCAACAGCAAAGGCCAGCGCATGTCGGACACGGTGCGCCGAATGCT
GATGAAGGGAAAAGCGGGAGGGAGGAGCGGCCTGCACCAGGACGATCGTT
TTTATCTCGAGGTAAGTAGGCAGGGAGGGAGGGAGGGAGAGGGGAAGGAA
GGGAAAGAGGAGGGGGTAGCATCTGACAAGTCTTTACGTTCCCTGTGTTC
AAAGATACGCTTTGGGGGCCTCCTCATTGGAGAGGATGGCACCTCCTCCT
CCCCCTCCTCCTCCCCCTCCTCGCCATCGTCGTCTTCTTCTTGTCCACCA
CTTGAGGTGGTAGACTACATCTTTGTCTCTCGGTTGTGGACCCTCGGAAG
AACTCTCGATGAGGCGGTGGGGAAGCACCAGGCCGCGCTGCGAAAAGTCT
ATCCTCCCTCTCCTTCTTCTCCTTCCCACAAGCCCTCCCCTACTTCCTAC
ACCTTCCTGAATGAGCGCACTGGCCTCTCCCTCCATCCTTTCCTCGGCCG
CTCCCTCCTCGACCTCGCTTCGGCCAAGCTCGTCGATGACTATGAGTCTC
TCATCCTTCTTCCTTTCAGTGAAGAGGGGGGGAAAGAAGAGGGAGAAAAT
GAGGGAGCGAAAGAGGGAGAGGCTGCTGCGAGAGAAGGAGGGGAGGAAGG
AGAGAAGGAAGGGACAACAATGACAAAAACAGCAGCAGAAGCGGTAGCAG
TAGCTACCCAAAAATCAAAGACGATCACAGCGGCAGTGGCAGCAGCAGTA
GAGCCAATGAGCACAGAGGTAGAAGACGGACAGAGTGAAGGGAAAGGAGA
AGCTTCCCTTCCTCCATCTCTCACCTTGTACATCACCCAAGGTTCCTCTG
TCTCTCACCCTCTCGTCTTTCCCTTGTCCGAGTGGCCCTCCCTATGTACC
TCTGACCTACAAGAACGTGTGTGGACTGCTACAGGAATTAGACCTGAGCG
GCAAAAATTGTTGTTCAAGGGCGTGATGGAGGGGGGAGGAAAGAAACTCT
GTGAATGGAAAGGCCTCCGAGACGGGAGCAAGATCACTCTCATGACGAAG
AAGTAA
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Synonyms
Publications