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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr28 | genome | chr28:515699..518266 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO28G01650.3 ID=NO28G01650.3|Name=NO28G01650.3|organism=Nannochloropsis oceanica|type=mRNA|length=1362bp ACCACAGCCAGAGTTACGCGGTAGCCTACACATCACATTTTACTTTCCCG CCTCGACGGAAATGTCAGCGCACTACGGCGATAAGTGTGCCTTGTGCGGG AAGAACGACTTCCTGCCGCTCAACGGACAACGTCACCATCGCTCGTCCCG AGGCAGTGGGCTTAGGCAAAGCTCTGGCTGACGAAATGGCTGATGTTGCT CGCCGCTTTGAGGGGAAGGGCGAGTGGTCGCAGAAGGTGCACATCCGAGT CAAGGGTAGCGGTGCCGCACTAGCTTCTTCCTTCCAAAAAGAAAACAAAT TTCTTCGAGCTTACCGGGCAAAGGCGAAGGGAGGGAGAAGCAACAGCAAA GGCCAGCGCATGTCGGACACGGTGCGCCGAATGCTGATGAAGGGAAAAGC GGGAGGGAGGAGCGGCCTGCACCAGGACGATCGTTTTTATCTCGAGATAC GCTTTGGGGGCCTCCTCATTGGAGAGGATGGCACCTCCTCCTCCCCCTCC TCCTCCCCCTCCTCGCCATCGTCGTCTTCTTCTTGTCCACCACTTGAGGT GGTAGACTACATCTTTGTCTCTCGGTTGTGGACCCTCGGAAGAACTCTCG ATGAGGCGGTGGGGAAGCACCAGGCCGCGCTGCGAAAAGTCTATCCTCCC TCTCCTTCTTCTCCTTCCCACAAGCCCTCCCCTACTTCCTACACCTTCCT GAATGAGCGCACTGGCCTCTCCCTCCATCCTTTCCTCGGCCGCTCCCTCC TCGACCTCGCTTCGGCCAAGCTCGTCGATGACTATGAGTCTCTCATCCTT CTTCCTTTCAGTGAAGAGGGGGGGAAAGAAGAGGGAGAAAATGAGGGAGC GAAAGAGGGAGAGGCTGCTGCGAGAGAAGGAGGGGAGGAAGGAGAGAAGG AAGGGACAACAATGACAAAAACAGCAGCAGAAGCGGTAGCAGTAGCTACC CAAAAATCAAAGACGATCACAGCGGCAGTGGCAGCAGCAGTAGAGCCAAT GAGCACAGAGGTAGAAGACGGACAGAGTGAAGGGAAAGGAGAAGCTTCCC TTCCTCCATCTCTCACCTTGTACATCACCCAAGGTTCCTCTGTCTCTCAC CCTCTCGTCTTTCCCTTGTCCGAGTGGCCCTCCCTATGTACCTCTGACCT ACAAGAACGTGTGTGGACTGCTACAGGAATTAGACCTGAGCGGCAAAAAT TGTTGTTCAAGGGCGTGATGGAGGGGGGAGGAAAGAAACTCTGTGAATGG AAAGGCCTCCGAGACGGGAGCAAGATCACTCTCATGACGAAGAAGTAAAA AGGACCAGACGACGAACGAAAGGGAATGAGATGCGCGCCGCACATGTGCA TTCTTTTGGAGG back to topprotein sequence of NO28G01650.3 >NO28G01650.3-protein ID=NO28G01650.3-protein|Name=NO28G01650.3|organism=Nannochloropsis oceanica|type=polypeptide|length=371bp MADVARRFEGKGEWSQKVHIRVKGSGAALASSFQKENKFLRAYRAKAKGG RSNSKGQRMSDTVRRMLMKGKAGGRSGLHQDDRFYLEIRFGGLLIGEDGT SSSPSSSPSSPSSSSSCPPLEVVDYIFVSRLWTLGRTLDEAVGKHQAALR KVYPPSPSSPSHKPSPTSYTFLNERTGLSLHPFLGRSLLDLASAKLVDDY ESLILLPFSEEGGKEEGENEGAKEGEAAAREGGEEGEKEGTTMTKTAAEA VAVATQKSKTITAAVAAAVEPMSTEVEDGQSEGKGEASLPPSLTLYITQG SSVSHPLVFPLSEWPSLCTSDLQERVWTATGIRPERQKLLFKGVMEGGGK KLCEWKGLRDGSKITLMTKK* back to topmRNA from alignment at chr28:515699..518266- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO28G01650.3 ID=NO28G01650.3|Name=NO28G01650.3|organism=Nannochloropsis oceanica|type=mRNA|length=2568bp|location=Sequence derived from alignment at chr28:515699..518266- (Nannochloropsis oceanica) ACCACAGCCAGAGTTACGCGGTAGCCTACACATCACATTTTACTTTCCCG
CCTCGACGGAAATGTCAGCGCACTACGGCGATAAGTGTGCCTTGTGCGGG
AAGAACGACTTCCTGCCGCTCAAGTGCGTTGTGGGGAGTTACGGAGGGAG
GGCAGGGAGGGAGGGCAGGGAGGGAGGGCAGTGAAGGGAAGGAGGAAGAG
GTACAAAGGGTCTACAGATGCACTGCATGGACGCGTCGCACATGCTCTTA
TACATTCATTTTCCGAACATTTTTGTTTTCGTTATGTGCATAGGTGTGAT
TTGTGCGCACTTCTTCTTTGCACGGAACATATGGCCCCGTTTGCACACCC
CTGCGCGGGGCGGGGTGAGCAGAGAGGGGAGAATGGGAGAGGGAGGGGAG
GGGGGCATAGAGCTTGAGTCAGAGAGGCGGAATAGCAAGTGAAATGAAAG
CTTCTGGATATTGTCTATGCATGCGTAGGGCCTTTGCGCTCGCTTCTTCC
CACCCATTTCTTCCCTCCCTCTTACCCTCCCTCCCTCCCTCCCTCCCTTT
TTCCGCAGCGGACAACGTCACCATCGCTCGTCCCGAGGCAGTGGGCTTAG
GCAAAGCTCTGGCTGACGAAATGGCTGATGTTGCTCGCCGCTTTGAGGGG
AAGGGCGAGGTAAGGAACGAGGGAGTGAAGGAGGAAGAGGAAGGGAGGGA
GGGAGGGGGGTAGGACCTCTCCCAGGCATCCTCCCTACGCAAATTGAACT
TCATCCCTCCCTCTCTCCCTCCCTCCCTCCCTTCTTCCCTCCCTCCCCCC
GTCTCCAGTGGTCGCAGAAGGTGCACATCCGAGTCAAGGGTAGCGGTGCC
GCACTAGCTTCTTCCTTCCAAAAAGAAAACAAATTTCTTCGAGCTTACCG
GGCAAAGGCGAAGGGAGGTAGGGAGGGAGGGAGGGGGGGAGAGAAGGAGA
GAGGGGATCAGAAAGGGAGGAAAGGAGGAGTTAGAGAGGAAGGGAGGGAG
GGAATGAGAGAGGGATGGCATAAAGGATGCTTTCATCCACCTCACCCATC
CAACTTTCATTTCTTTCCTCCCTTCCTTCCTCGGCTGAGAATGCTCTTCT
GTGTCTGTCAAAGATGTCCACTATTTCTCTCTCCCCCCCTTCCTCCCTCC
CTTTCTCTCTCCCTCCCTTCCTCCTCAGGGAGAAGCAACAGCAAAGGCCA
GCGCATGTCGGACACGGTGCGCCGAATGCTGATGAAGGGAAAAGCGGGAG
GGAGGAGCGGCCTGCACCAGGACGATCGTTTTTATCTCGAGGTAAGTAGG
CAGGGAGGGAGGGAGGGAGAGGGGAAGGAAGGGAAAGAGGAGGGGGTAGC
ATCTGACAAGTCTTTACGTTCCCTGTGTTCAAAGATACGCTTTGGGGGCC
TCCTCATTGGAGAGGATGGCACCTCCTCCTCCCCCTCCTCCTCCCCCTCC
TCGCCATCGTCGTCTTCTTCTTGTCCACCACTTGAGGTACGCTCAACTTT
TAAAACGCTATGCACATACGCACCACTCCCCTCCCTCCTTTCCTCCTTCC
TTCCCCCTCCTTCCCCTCCTCCCCTCCTTGTGACAAGGCACCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCCCCCCCAGGTGGTAGACTACATCTTT
GTCTCTCGGTTGTGGACCCTCGGAAGAACTCTCGATGAGGCGGTGGGGAA
GCACCAGGCCGCGCTGCGAAAAGTCTATCCTCCCTCTCCTTCTTCTCCTT
CCCACAAGGTGAGTGGCGAGCCCTGCCTTCCCTCCATCCCTCCCTCCCTT
CCTTCCTTCTTCCCTCCCCTGCGTGAACCTCGATTCTGCCGATAAATACA
ACCTCCCCCCCTCCTTCCCTACGTCCCTAGCCCTCCCCTACTTCCTACAC
CTTCCTGAATGAGCGCACTGGCCTCTCCCTCCATCCTTTCCTCGGCCGCT
CCCTCCTCGACCTCGCTTCGGCCAAGCTCGTCGATGACTATGAGTCTCTC
ATCCTTCTTCCTTTCAGTGAAGAGGGGGGGAAAGAAGAGGGAGAAAATGA
GGGAGCGAAAGAGGGAGAGGCTGCTGCGAGAGAAGGAGGGGAGGAAGGAG
AGAAGGAAGGGACAACAATGACAAAAACAGCAGCAGAAGCGGTAGCAGTA
GCTACCCAAAAATCAAAGACGATCACAGCGGCAGTGGCAGCAGCAGTAGA
GCCAATGAGCACAGAGGTAGAAGACGGACAGAGTGAAGGGAAAGGAGAAG
CTTCCCTTCCTCCATCTCTCACCTTGTACATCACCCAAGGTTCCTCTGTC
TCTCACCCTCTCGTCTTTCCCTTGTCCGAGTGGCCCTCCCTATGTACCTC
TGACCTACAAGAACGTGTGTGGACTGCTACAGGAATTAGACCTGAGCGGC
AAAAATTGTTGTTCAAGGGCGTGATGGAGGGGGGAGGAAAGAAACTCTGT
GAATGGAAAGGCCTCCGAGACGGGAGCAAGATCACTCTCATGACGAAGAA
GTAAAAAGGACCAGACGACGAACGAAAGGGAATGAGATGCGCGCCGCACA
TGTGCATTCTTTTGGAGG back to topCoding sequence (CDS) from alignment at chr28:515699..518266- >NO28G01650.3 ID=NO28G01650.3|Name=NO28G01650.3|organism=Nannochloropsis oceanica|type=CDS|length=1113bp|location=Sequence derived from alignment at chr28:515699..518266- (Nannochloropsis oceanica) ATGGCTGATGTTGCTCGCCGCTTTGAGGGGAAGGGCGAGTGGTCGCAGAA GGTGCACATCCGAGTCAAGGGTAGCGGTGCCGCACTAGCTTCTTCCTTCC AAAAAGAAAACAAATTTCTTCGAGCTTACCGGGCAAAGGCGAAGGGAGGG AGAAGCAACAGCAAAGGCCAGCGCATGTCGGACACGGTGCGCCGAATGCT GATGAAGGGAAAAGCGGGAGGGAGGAGCGGCCTGCACCAGGACGATCGTT TTTATCTCGAGATACGCTTTGGGGGCCTCCTCATTGGAGAGGATGGCACC TCCTCCTCCCCCTCCTCCTCCCCCTCCTCGCCATCGTCGTCTTCTTCTTG TCCACCACTTGAGGTGGTAGACTACATCTTTGTCTCTCGGTTGTGGACCC TCGGAAGAACTCTCGATGAGGCGGTGGGGAAGCACCAGGCCGCGCTGCGA AAAGTCTATCCTCCCTCTCCTTCTTCTCCTTCCCACAAGCCCTCCCCTAC TTCCTACACCTTCCTGAATGAGCGCACTGGCCTCTCCCTCCATCCTTTCC TCGGCCGCTCCCTCCTCGACCTCGCTTCGGCCAAGCTCGTCGATGACTAT GAGTCTCTCATCCTTCTTCCTTTCAGTGAAGAGGGGGGGAAAGAAGAGGG AGAAAATGAGGGAGCGAAAGAGGGAGAGGCTGCTGCGAGAGAAGGAGGGG AGGAAGGAGAGAAGGAAGGGACAACAATGACAAAAACAGCAGCAGAAGCG GTAGCAGTAGCTACCCAAAAATCAAAGACGATCACAGCGGCAGTGGCAGC AGCAGTAGAGCCAATGAGCACAGAGGTAGAAGACGGACAGAGTGAAGGGA AAGGAGAAGCTTCCCTTCCTCCATCTCTCACCTTGTACATCACCCAAGGT TCCTCTGTCTCTCACCCTCTCGTCTTTCCCTTGTCCGAGTGGCCCTCCCT ATGTACCTCTGACCTACAAGAACGTGTGTGGACTGCTACAGGAATTAGAC CTGAGCGGCAAAAATTGTTGTTCAAGGGCGTGATGGAGGGGGGAGGAAAG AAACTCTGTGAATGGAAAGGCCTCCGAGACGGGAGCAAGATCACTCTCAT GACGAAGAAGTAA back to top
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