NO28G01410.1, NO28G01410.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO28G01410.1
Unique NameNO28G01410.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2341
Alignment locationchr28:441672..444278 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr28genomechr28:441672..444278 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO28G01410.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO28G01410NO28G01410Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO28G01410.1NO28G01410.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO28G01410.1.cds1NO28G01410.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO28G01410.1.cds2NO28G01410.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO28G01410.1.cds3NO28G01410.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO28G01410.1 ID=NO28G01410.1|Name=NO28G01410.1|organism=Nannochloropsis oceanica|type=mRNA|length=2341bp
AGTGGGAAGCACACCACATAGGTCAATAGAGCTCGTCTCCCGCCCGCCCT
CCATTCTCCCATCCTCCACGCACTTCACAAATGGTCGTCACGGCCATGTT
GTACATGGATGGATTTGAAGGAAGGAGGGATCAGTCCCTCACACTGGCAG
GCAGACAGACACCTGTCGCATGGAAGCTACAAAAAAACGGACACTCTGAA
GGCAACGAACGTGAGGTAAGCAGGCAATAATTCTCACATCCAGGCCTTGA
CCATTCAACCACGGTTACAACATCTCCATTCGATACACAGAAAGAAGAGT
CTGGTAGTGTAGGCGCTGCTGGTGGTGGTTCTCGGCTGCTGCCGCCCCAA
AAAGCCTAAACTTCGTTTCAATGGCGACAGTGATCATCGATCATTACTTC
CACTCCACATTTCCACGCGGCCTTTCACCATCACTCTTTACCACTCCTCC
ATCCCGACACAGACAGGCACGCCAAGCCCTTGTTTGTGAAATAACGAGGC
AGATCCTTTCTTCCTTCCTATTACCTGGAAGGCAGAGGCCGCTTAGAGTA
TCCTGTTTGACTGCCCTTTGCCCTCCTCGTTCTACGACCTCCTCCCCCCC
AGTCTCTATCCCAACGTCTCGTGGCCACCATTCAACGCCAAGCAAGCTAA
GAAACATTCGGTTTAAAAACAATATGCCTCGGTCACAGCATTACAATAAT
GTATTTCGTCCATCCTCCTCTTTGCTAGACGACCAGGCCCTCGATGGTGG
CTTCGGCGGCAGCAGCGCCAGCAGCAGCAGCAGCAGTAGTAGTAGTAGAA
GTAGTGGGAATAGTAGTAGTGGTGAAGACTCCGACGACGACGAAGAAATT
CATCACCACCATCACCACCAAAACGGTCACCGTCCCGGCTCATTCTCTAC
CTCTTCCTCCTCCAGCAGCAGCAGCGGCAGTAGCCACAACAACGGCAGTC
CCGACCACTTGACACATGCAGAGCTCACCCTCTTCTCCTCCTTCGTCGCC
CATGCCCACTTGGCCCTTCCCGACTGGGATGAAGAGGATATGGGCAAACT
CATCTATCTCATCTCGACGTTCAAAAACAAACATTTAAATTCCAAAAAAT
TGTTTCACTTCATTGCCTCTTCCTGCCCTGAATACGTCACGGGACCCTTC
CTGGCTCGTGTGATGGGACCGGAGGGCGGGAGGAAGGAAAAGAGAAAGGG
CAGGTTGCTAAATGCGAAGCAGGTGGTGCAATTAATCGAGGCGGGAGCTC
GGAATAAAGAGGACCTGATCTTGAAGATTGTGGACGTGCTGGAGCACCAG
GTCCTGTCGTTGTCGGACGAAGCGACTGCGTTATGCCTGGTGGCTACTGT
AGACGGACAGCACCCCTCCCTCAAGCGGTCCCTTGCCCTCGCCCTCGGGG
AGATGTGTGAATCGAAGGGTCAATTCATTTTCCTCCTGTCCCTCTTTCAG
GAACGGGGGAAGGGGGGGAGGGACGGGTGGATGAGGGAGGTAGGGCGGGA
GGCCGCTGCACTTTGGTGGGAGGATTTGGGCGCTGGAAGGGGGGGGAGGA
GGAGAAAGGGGAGGAAGAGGAGGGAGGGAGGGAGGGAGGAAGAGGAGGAA
GAAGAGCTGAGGAGGTTATACCCGGAGGTGGAGGAATTTTGGGAGGGGAT
AAGGGAGAGGAGGGAGCAGGAGGGAGGGGAGGAGGACGAGGAGGACGAGG
AGGGGAACCTGAAGGGTTTTGTGGTGAGGGATGAGGAGGGGTTGGAGGAG
GAGGGGGGGGAGGAGGAGGAGGGGGAGGAGGGGGAGGAGGAAGAGGGGTT
GGATGAGGAGGAAGGGGAGGAGGAGGAGGAGGAAGAAGGGATAAAAAAGG
AAAAGGAGAAAGAAAAAGAAAAAGAGGAGGAGAAGGAGGAGGAGAAGCTG
AAGGAGGAAAAGAGGACTGGACGCATCAAGAACAAGGACATTCGTCGACG
GCAAGAGAAGAGGAGGAAGAGGGAGAGGGAGGCAGTGGGGGGGGAGAGAA
AGAAGGAGGTGGGTGAAAAGGAGGAGGAGGGGGGAAAGAAGAAGGAGGAG
GCTGTGGGAGGGAAGAGAAAGAAGAAGGAGGTGGGGGAAGAGGAGGAGGA
GGAGGAAGGGGAAGGGGGATGGAAAGGGGAAAAGAAGGAGGAGGAAAATG
GCGGGAGGATGGGGAAGGGGGCAAAGAAGGAGGAGAAGAAGAAGAAGAAG
AAGAAGAACCGCAACAAGAAGAGGAGTGGGATGATAGCTGGCCGGCAAGG
AGAAGGAGAAAGAGAAGGGGGAGGGAAAGAAAAAGAGAGAGGAGAAGGGA
GGCACGCAAGCGTGAAACGTCGACGGGTGGTGTCTGATTAA
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protein sequence of NO28G01410.1

>NO28G01410.1-protein ID=NO28G01410.1-protein|Name=NO28G01410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=657bp
MATVIIDHYFHSTFPRGLSPSLFTTPPSRHRQARQALVCEITRQILSSFL
LPGRQRPLRVSCLTALCPPRSTTSSPPVSIPTSRGHHSTPSKLRNIRFKN
NMPRSQHYNNVFRPSSSLLDDQALDGGFGGSSASSSSSSSSSRSSGNSSS
GEDSDDDEEIHHHHHHQNGHRPGSFSTSSSSSSSSGSSHNNGSPDHLTHA
ELTLFSSFVAHAHLALPDWDEEDMGKLIYLISTFKNKHLNSKKLFHFIAS
SCPEYVTGPFLARVMGPEGGRKEKRKGRLLNAKQVVQLIEAGARNKEDLI
LKIVDVLEHQVLSLSDEATALCLVATVDGQHPSLKRSLALALGEMCESKG
QFIFLLSLFQERGKGGRDGWMREVGREAAALWWEDLGAGRGGRRRKGRKR
REGGREEEEEEELRRLYPEVEEFWEGIRERREQEGGEEDEEDEEGNLKGF
VVRDEEGLEEEGGEEEEGEEGEEEEGLDEEEGEEEEEEEGIKKEKEKEKE
KEEEKEEEKLKEEKRTGRIKNKDIRRRQEKRRKREREAVGGERKKEVGEK
EEEGGKKKEEAVGGKRKKKEVGEEEEEEEGEGGWKGEKKEEENGGRMGKG
AKKEEKKKKKKKNRNKKRSGMIAGRQGEGEREGGGKEKERGEGRHASVKR
RRVVSD*
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mRNA from alignment at chr28:441672..444278+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO28G01410.1 ID=NO28G01410.1|Name=NO28G01410.1|organism=Nannochloropsis oceanica|type=mRNA|length=2607bp|location=Sequence derived from alignment at chr28:441672..444278+ (Nannochloropsis oceanica)
AGTGGGAAGCACACCACATAGGTCAATAGAGCTCGTCTCCCGCCCGCCCT
CCATTCTCCCATCCTCCACGCACTTCACAAATGGTCGTCACGGCCATGTT
GTACATGGATGGATTTGAAGGAAGGAGGGATCAGTCCCTCACACTGGCAG
GCAGACAGACACCTGTCGCATGGAAGCTACAAAAAAACGGACACTCTGAA
GGCAACGAACGTGAGGTAAGCAGGCAATAATTCTCACATCCAGGCCTTGA
CCATTCAACCACGGTTACAACATCTCCATTCGATACACAGAAAGAAGAGT
CTGGTAGTGTAGGCGCTGCTGGTGGTGGTTCTCGGCTGCTGCCGCCCCAA
AAAGCCTAAACTTCGTTTCAATGGCGACAGTGATCATCGATCATTACTTC
CACTCCACATTTCCACGCGGCCTTTCACCATCACTCTTTACCACTCCTCC
ATCCCGACACAGACAGGCACGCCAAGCCCTTGTTTGTGAAATAACGAGGC
AGATCCTTTCTTCCTTCCTATTACCTGGAAGGCAGAGGCCGCTTAGAGTA
TCCTGTTTGACTGCCCTTTGCCCTCCTCGTTCTACGACCTCCTCCCCCCC
AGTCTCTATCCCAACGTCTCGTGGCCACCATTCAACGCCAAGCAAGCTAA
GAAACATTCGGTTTAAAAACAATATGCCTCGGTCACAGCATTACAATAAT
GTATTTCGTCCATCCTCCTCTTTGCTAGACGACCAGGCCCTCGATGGTGG
CTTCGGCGGCAGCAGCGCCAGCAGCAGCAGCAGCAGTAGTAGTAGTAGAA
GTAGTGGGAATAGTAGTAGTGGTGAAGACTCCGACGACGACGAAGAAATT
CATCACCACCATCACCACCAAAACGGTCACCGTCCCGGCTCATTCTCTAC
CTCTTCCTCCTCCAGCAGCAGCAGCGGCAGTAGCCACAACAACGGCAGTC
CCGACCACTTGACACATGCAGAGCTCACCCTCTTCTCCTCCTTCGTCGCC
CATGCCCACTTGGCCCTTCCCGACTGGGATGAAGAGGATATGGGCAAACT
CATCTATCTCATCTCGACGTTCAAAAACAAACATTTAAATTCCAAAAAAT
TGTTTCACTTCATTGCCTCTTCCTGCCCTGAATACGTCACGGGACCCTTC
CTGGCTCGTGTGATGGGACCGGAGGGCGGGAGGAAGGAAAAGAGAAAGGG
CAGGTTGCTAAATGCGAAGCAGGTGGTGCAATTAATCGAGGCGGGAGCTC
GGAATAAAGAGGACCTGATCTTGAAGATTGTGGACGTGCTGGAGCACCAG
GTGAACCCTCCCTCCCTCCCTCCCTCCCTCCATTCCTCCCTTCTTCCCTC
CCTCCCTCCTCTACTTCACGTCCAACTACCCTCCCTGCCTCCCTCCCTTG
CCTTGGGTGACGGCTCATTCCATCCCTTTGCTCCTTCCCTTCCTTCCCTC
TCTCCTCAGGTCCTGTCGTTGTCGGACGAAGCGACTGCGTTATGCCTGGT
GGCTACTGTAGACGGACAGCACCCCTCCCTCAAGCGGTCCCTTGCCCTCG
CCCTCGGGGAGATGTGTGAATCGAAGGGTCAATTCATTTTCCTCCTGTCC
CTCTTTCAGGAACGGGGGAAGGGGGGGAGGGACGGGTGGATGAGGGAGGT
AGGGCGGGAGGCCGCTGCACTTTGGTGGGAGGATTTGGGCGCTGGAAGGG
GGGGGAGGAGGAGAAAGGGGAGGAAGAGGAGGGAGGGAGGGAGGGAGGAA
GAGGAGGAAGAAGAGCTGAGGAGGTTATACCCGGAGGTGGAGGAATTTTG
GGAGGGGATAAGGGAGAGGAGGGAGCAGGAGGGAGGGGAGGAGGACGAGG
AGGACGAGGAGGGGAACCTGAAGGGTTTTGTGGTGAGGGATGAGGAGGGG
TTGGAGGAGGAGGGGGGGGAGGAGGAGGAGGGGGAGGAGGGGGAGGAGGA
AGAGGGGTTGGATGAGGAGGAAGGGGAGGAGGAGGAGGAGGAAGAAGGGA
TAAAAAAGGTTAGGAAAAGAAATCGGGAAAAAGGCAAGAAGGGAGAGAAT
AAGAGGGAGGAGGTGGAGGAGGTCGGGGACGAGGAGGGGGGGATGGAGAG
AAGAGGGAGAAACAGGAAAAGGAGAAAGAAAAAGAAAAAGAGGAGGAGAA
GGAGGAGGAGAAGCTGAAGGAGGAAAAGAGGACTGGACGCATCAAGAACA
AGGACATTCGTCGACGGCAAGAGAAGAGGAGGAAGAGGGAGAGGGAGGCA
GTGGGGGGGGAGAGAAAGAAGGAGGTGGGTGAAAAGGAGGAGGAGGGGGG
AAAGAAGAAGGAGGAGGCTGTGGGAGGGAAGAGAAAGAAGAAGGAGGTGG
GGGAAGAGGAGGAGGAGGAGGAAGGGGAAGGGGGATGGAAAGGGGAAAAG
AAGGAGGAGGAAAATGGCGGGAGGATGGGGAAGGGGGCAAAGAAGGAGGA
GAAGAAGAAGAAGAAGAAGAAGAACCGCAACAAGAAGAGGAGTGGGATGA
TAGCTGGCCGGCAAGGAGAAGGAGAAAGAGAAGGGGGAGGGAAAGAAAAA
GAGAGAGGAGAAGGGAGGCACGCAAGCGTGAAACGTCGACGGGTGGTGTC
TGATTAA
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Coding sequence (CDS) from alignment at chr28:441672..444278+

>NO28G01410.1 ID=NO28G01410.1|Name=NO28G01410.1|organism=Nannochloropsis oceanica|type=CDS|length=1971bp|location=Sequence derived from alignment at chr28:441672..444278+ (Nannochloropsis oceanica)
ATGGCGACAGTGATCATCGATCATTACTTCCACTCCACATTTCCACGCGG
CCTTTCACCATCACTCTTTACCACTCCTCCATCCCGACACAGACAGGCAC
GCCAAGCCCTTGTTTGTGAAATAACGAGGCAGATCCTTTCTTCCTTCCTA
TTACCTGGAAGGCAGAGGCCGCTTAGAGTATCCTGTTTGACTGCCCTTTG
CCCTCCTCGTTCTACGACCTCCTCCCCCCCAGTCTCTATCCCAACGTCTC
GTGGCCACCATTCAACGCCAAGCAAGCTAAGAAACATTCGGTTTAAAAAC
AATATGCCTCGGTCACAGCATTACAATAATGTATTTCGTCCATCCTCCTC
TTTGCTAGACGACCAGGCCCTCGATGGTGGCTTCGGCGGCAGCAGCGCCA
GCAGCAGCAGCAGCAGTAGTAGTAGTAGAAGTAGTGGGAATAGTAGTAGT
GGTGAAGACTCCGACGACGACGAAGAAATTCATCACCACCATCACCACCA
AAACGGTCACCGTCCCGGCTCATTCTCTACCTCTTCCTCCTCCAGCAGCA
GCAGCGGCAGTAGCCACAACAACGGCAGTCCCGACCACTTGACACATGCA
GAGCTCACCCTCTTCTCCTCCTTCGTCGCCCATGCCCACTTGGCCCTTCC
CGACTGGGATGAAGAGGATATGGGCAAACTCATCTATCTCATCTCGACGT
TCAAAAACAAACATTTAAATTCCAAAAAATTGTTTCACTTCATTGCCTCT
TCCTGCCCTGAATACGTCACGGGACCCTTCCTGGCTCGTGTGATGGGACC
GGAGGGCGGGAGGAAGGAAAAGAGAAAGGGCAGGTTGCTAAATGCGAAGC
AGGTGGTGCAATTAATCGAGGCGGGAGCTCGGAATAAAGAGGACCTGATC
TTGAAGATTGTGGACGTGCTGGAGCACCAGGTCCTGTCGTTGTCGGACGA
AGCGACTGCGTTATGCCTGGTGGCTACTGTAGACGGACAGCACCCCTCCC
TCAAGCGGTCCCTTGCCCTCGCCCTCGGGGAGATGTGTGAATCGAAGGGT
CAATTCATTTTCCTCCTGTCCCTCTTTCAGGAACGGGGGAAGGGGGGGAG
GGACGGGTGGATGAGGGAGGTAGGGCGGGAGGCCGCTGCACTTTGGTGGG
AGGATTTGGGCGCTGGAAGGGGGGGGAGGAGGAGAAAGGGGAGGAAGAGG
AGGGAGGGAGGGAGGGAGGAAGAGGAGGAAGAAGAGCTGAGGAGGTTATA
CCCGGAGGTGGAGGAATTTTGGGAGGGGATAAGGGAGAGGAGGGAGCAGG
AGGGAGGGGAGGAGGACGAGGAGGACGAGGAGGGGAACCTGAAGGGTTTT
GTGGTGAGGGATGAGGAGGGGTTGGAGGAGGAGGGGGGGGAGGAGGAGGA
GGGGGAGGAGGGGGAGGAGGAAGAGGGGTTGGATGAGGAGGAAGGGGAGG
AGGAGGAGGAGGAAGAAGGGATAAAAAAGGAAAAGGAGAAAGAAAAAGAA
AAAGAGGAGGAGAAGGAGGAGGAGAAGCTGAAGGAGGAAAAGAGGACTGG
ACGCATCAAGAACAAGGACATTCGTCGACGGCAAGAGAAGAGGAGGAAGA
GGGAGAGGGAGGCAGTGGGGGGGGAGAGAAAGAAGGAGGTGGGTGAAAAG
GAGGAGGAGGGGGGAAAGAAGAAGGAGGAGGCTGTGGGAGGGAAGAGAAA
GAAGAAGGAGGTGGGGGAAGAGGAGGAGGAGGAGGAAGGGGAAGGGGGAT
GGAAAGGGGAAAAGAAGGAGGAGGAAAATGGCGGGAGGATGGGGAAGGGG
GCAAAGAAGGAGGAGAAGAAGAAGAAGAAGAAGAAGAACCGCAACAAGAA
GAGGAGTGGGATGATAGCTGGCCGGCAAGGAGAAGGAGAAAGAGAAGGGG
GAGGGAAAGAAAAAGAGAGAGGAGAAGGGAGGCACGCAAGCGTGAAACGT
CGACGGGTGGTGTCTGATTAA
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Synonyms
Publications