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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr28 | genome | chr28:352486..355905 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO28G01140.1 ID=NO28G01140.1|Name=NO28G01140.1|organism=Nannochloropsis oceanica|type=mRNA|length=3321bp
ATGAGTTTTCAGTTTTCTGACTTGTGGATCCATACTTTCTTCCCACTTAT
CGCCCTCCTCTTTGACTACAACAGCTTCGAGCTCTTCAACTGCCATCTCT
TGTTCCTCCCCTCCCTCCTCCCCTCCCTTCCCCTTCCGAAACGTGTAAAA
TTGCAGTTCCAACAATACACTGGCCAAGGCAAAGACTGCCCATTGCAACA
ACAGGGGCAAGGTCTCGCCTAAGTACAATAAATAGGGGATTATCAAGACC
GCGGAGGCATGCCATAAGAGGACGAGGGAGAGGGAGAGGCCCTCGGTAGA
GCGACGGGCTTGGTTGAGGAAGATCTGTGGAAAGAGGAGCAAGGCGAAGC
AGACCATGGCTATGTATCCACATGTCTGAATGACAGCATTCAAAGGCATG
GACAGCCTAGAGATGGACGGAGGAGGGAGAGAGGAAGAAGGAGGGAGGAG
GCGGGAAGGGAGGGTTGGTTTTGTTATGTGCGAGTGCCTTTGCAGAAGCA
GCTTGGAATGAAAAATTTGCACAGAGAGAGAGTATATTAAGGTGGGGTCA
TATCTCTTTGGAAATATGGAGGAGTAGAGGCGTGCATGCGTGCATGGCAA
AGGGCAGCGAGAAATAGATACAGAGTGGGGCTTGGCACTTCGCATTGTGT
GAGCGAGAGAGAGCTAGGGTTGGGGATCCGTGGCGGCGATTGCGCTTACC
TTTGATGCTAGGAGTGAAGGAAGCTACAAAAAATCCTGTTACACGGCAAT
CTGCATCCGGATCCTGGTGTGTGTGTGAGTTGCCTGTCTGGGGGTGGGGA
GGGGGAAGGGAGGGAGGAGAGGGTGCGTTAGAGGAGAGAAGTGCGTGGAT
TGGAGGCCGGCAAGAACACAACAAGCGGGCAAAAATTTGGGCTTGGACAT
ATTATAACCTTGAAAGCATCTTCACACTTAAGCACTGTCATGTCCGAGGG
TGGTCAAGGGGTACGCACGTAGTCGCAGAGCAGCGATGTGAAGCCTCGTC
GAGATGCCGAGAGTCCTTCTCAGGAGGGACAAGCAGGCAGCACTGGCGAC
CAAAAATAAGAGGAGACACAAATGGAAAGAGTGGTGAGCATTGCCAGGTA
GCACATCAGCCGGAGGAAGGTTTCATATCAAGGGGAGAAAAAAAAACACA
TACTACATCCCGTCGGAGGATGATGGGGAATATTTTGGAGCAACGACACG
TACCCTGCCCGATCAACATATAATAGTTTCCCCGGAGGCTTCGGTTGTGT
GGCCCTGCGTCCCGCCTCCTCATACATACAACATATAATAGTTTCCCCGG
AGGCTTCGGTTGTGTGGCCCTGCGTCCCGCCTCCTTATACATACGACAGA
CCATCTATAAAAGGCATTGGGACTGTCCTAGATGACCAGCGAGGGCTTTT
CTAGGGCCATCCTACTGTCCTACTTTACCGTGACATCCATCACACCACAA
GCACACAGCGCCTTAATCATGCCTAGGCGTCCACGGCCGTTGCCCTCCCT
TCTTCTCCTCCTCATCCTCCTCTTCCTCCTCCCCCACTCCACGCTCCCTT
CCTCCCAACCTCTTCCCCTATCTGCCGCCTCCTCCTCTTCGAGCCCTCCT
CCTCCTCCACCATCACCATCTGCTTACGTGGATTTGCTGCACGACCCATG
TTTTGTCACGAGCAACGACATTCGAGATTTCAACATGTATGGTTTCAAAC
GCTGGCATAACGGAAGCACTTTGGGAGCCTGGACAGTCACCTCTGGTGCC
GTGGATCAATACCTTGCCCCCGCTGTTGCCCAGAGCGCCGCCGCCAACCC
CAGAGGGTACCCCCCCCTCTGGCCCCTTCCTTCCCCCCTCCCTCCCTCCT
GCACCTCACTCTTGGACATCAACAGTGATGACGCCGCCAGTATTTCACAA
GCGGTGAGAGTGCGGGAGGGAAGGAGGTACCGGCTGAGTTTTTTGTTTGC
CGGGGATGCCCTGTCTTTGCATTTGCCCTCTTCAGGAGTAGGAGGAGGAG
GAGGAGGAGGAGGGGATATAAGGAGTGGTGGCGCAACTGCAGGAACACCA
TCAGGAGAAGGAGCAAAAGCAGGAGTGACACCAGGCCCTCCACCTTCCCA
CCAAGGATTGCCGCCGTTCAAATCGTTTTCGGTGTCGTGGCAAGGGACGG
AGGTCGGGCAGGTCTTCATTAATACGCTGGACCCCAGCACGGCGGGCAAC
GGTTGGGATTCTGCGAGCTACGACGTGACTGCTCTTTCGGAGGAAGAACG
ACTCAGTCTCGAGGCCATAGAAAGGAAGAAATTTGGCAATAAGGGAGGTA
AGAAGCACGAGAAGAAGAAGGAGAAGAAGAAGGAGAAGAAGGAGGAGGAG
AAGGAAATTGAGAAGGCGGCAAAGGAGCGTGAGAACCTGATAATGCAGGC
ACGAGAGGAGGGTGAGAAGGAGAAATGGCTCACAGCCATCATCAACATCA
CCTCCACCACTAAGGGAAAAAGCAGTTTGTTCCTCACCGACGTCCATCTG
TACGACCTCTCCACCCCCCTCCCTACTTCCCTCCCTTCCTCCTCCCCTTC
CTTTTCCACCTCTCGTATAATATTTCTGGTGGTCGCGCTCGGCATGGGGT
TGACTCTTTTTTGTTTGTTAGTGAATGTGTTGGCGTCGGCCAAGGGGGGC
TGGCGCTGGGACAAGCTCTCGCAGTGGCACAGAATGGAGGAGGAGGAGGA
GGAGGAGGAGATAGAGGAGGATGGGGGGGAAGGACTGAGAGGCTTGTATT
ATTATCCATCGTTGGAAATGCCGAGGAGGACGATGGAGGAAGGGGAGGAG
GTAAAGGGAAAAGGAGGGTGGGAGGACAGGAGGGACGATGAGGAGGAGGT
ACTTTTTCAGAGGGAGCGGGGACGAGGAAGGAGGGAGGGACGGAGAGAGG
GGAATGGGCTGCCGTCGGTGAGGCACCAAAGGGAGGAGGGGTACGGAAGC
ACGGGCTCTCGAAGAGATGGTGGCGGAGGAAGAGGAAAAGGAGACGGTGG
AGAAAGAGAGATTGATGTATAGGAAGGGAGGGAGGCATTGAGTGATATAA
GACGGGTAATCGGGGAATTTTGATGAGCCGGGAGAAATAACAAGGAGAAG
TCGCCAAAACCAAATGGCAGATGCGATAGATGAGTGACAGAATGATCAGA
AGCTCAAATTAAACGGAAAACAAAATAAATGTGGTGTTGACCCACGAATG
TCAAAATACAAACATAGAAGAAGAGGAATTACGAAAATGAAAAAATAAGA
AGAATCTGAAAATAAAATAAGAGTGAAGGCTAAGCTTGCCAAATTATTAA
AATGCACGCATTTTACAATGC back to topprotein sequence of NO28G01140.1 >NO28G01140.1-protein ID=NO28G01140.1-protein|Name=NO28G01140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=547bp
MTSEGFSRAILLSYFTVTSITPQAHSALIMPRRPRPLPSLLLLLILLFLL
PHSTLPSSQPLPLSAASSSSSPPPPPPSPSAYVDLLHDPCFVTSNDIRDF
NMYGFKRWHNGSTLGAWTVTSGAVDQYLAPAVAQSAAANPRGYPPLWPLP
SPLPPSCTSLLDINSDDAASISQAVRVREGRRYRLSFLFAGDALSLHLPS
SGVGGGGGGGGDIRSGGATAGTPSGEGAKAGVTPGPPPSHQGLPPFKSFS
VSWQGTEVGQVFINTLDPSTAGNGWDSASYDVTALSEEERLSLEAIERKK
FGNKGGKKHEKKKEKKKEKKEEEKEIEKAAKERENLIMQAREEGEKEKWL
TAIINITSTTKGKSSLFLTDVHLYDLSTPLPTSLPSSSPSFSTSRIIFLV
VALGMGLTLFCLLVNVLASAKGGWRWDKLSQWHRMEEEEEEEEIEEDGGE
GLRGLYYYPSLEMPRRTMEEGEEVKGKGGWEDRRDDEEEVLFQRERGRGR
REGRREGNGLPSVRHQREEGYGSTGSRRDGGGGRGKGDGGEREIDV* back to topmRNA from alignment at chr28:352486..355905- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO28G01140.1 ID=NO28G01140.1|Name=NO28G01140.1|organism=Nannochloropsis oceanica|type=mRNA|length=3420bp|location=Sequence derived from alignment at chr28:352486..355905- (Nannochloropsis oceanica)
ATGAGTTTTCAGTTTTCTGACTTGTGGATCCATACTTTCTTCCCACTTAT
CGCCCTCCTCTTTGACTACAACAGCTTCGAGCTCTTCAACTGCCATCTCT
TGTTCCTCCCCTCCCTCCTCCCCTCCCTTCCCCTTCCGAAACGTGTAAAA
TTGCAGTTCCAACAATACACTGGCCAAGGCAAAGACTGCCCATTGCAACA
ACAGGGGCAAGGTCTCGCCTAAGTACAATAAATAGGGGATTATCAAGACC
GCGGAGGCATGCCATAAGAGGACGAGGGAGAGGGAGAGGCCCTCGGTAGA
GCGACGGGCTTGGTTGAGGAAGATCTGTGGAAAGAGGAGCAAGGCGAAGC
AGACCATGGCTATGTATCCACATGTCTGAATGACAGCATTCAAAGGCATG
GACAGCCTAGAGATGGACGGAGGAGGGAGAGAGGAAGAAGGAGGGAGGAG
GCGGGAAGGGAGGGTTGGTTTTGTTATGTGCGAGTGCCTTTGCAGAAGCA
GCTTGGAATGAAAAATTTGCACAGAGAGAGAGTATATTAAGGTGGGGTCA
TATCTCTTTGGAAATATGGAGGAGTAGAGGCGTGCATGCGTGCATGGCAA
AGGGCAGCGAGAAATAGATACAGAGTGGGGCTTGGCACTTCGCATTGTGT
GAGCGAGAGAGAGCTAGGGTTGGGGATCCGTGGCGGCGATTGCGCTTACC
TTTGATGCTAGGAGTGAAGGAAGCTACAAAAAATCCTGTTACACGGCAAT
CTGCATCCGGATCCTGGTGTGTGTGTGAGTTGCCTGTCTGGGGGTGGGGA
GGGGGAAGGGAGGGAGGAGAGGGTGCGTTAGAGGAGAGAAGTGCGTGGAT
TGGAGGCCGGCAAGAACACAACAAGCGGGCAAAAATTTGGGCTTGGACAT
ATTATAACCTTGAAAGCATCTTCACACTTAAGCACTGTCATGTCCGAGGG
TGGTCAAGGGGTACGCACGTAGTCGCAGAGCAGCGATGTGAAGCCTCGTC
GAGATGCCGAGAGTCCTTCTCAGGAGGGACAAGCAGGCAGCACTGGCGAC
CAAAAATAAGAGGAGACACAAATGGAAAGAGTGGTGAGCATTGCCAGGTA
GCACATCAGCCGGAGGAAGGTTTCATATCAAGGGGAGAAAAAAAAACACA
TACTACATCCCGTCGGAGGATGATGGGGAATATTTTGGAGCAACGACACG
TACCCTGCCCGATCAACATATAATAGTTTCCCCGGAGGCTTCGGTTGTGT
GGCCCTGCGTCCCGCCTCCTCATACATACAACATATAATAGTTTCCCCGG
AGGCTTCGGTTGTGTGGCCCTGCGTCCCGCCTCCTTATACATACGACAGA
CCATCTATAAAAGGCATTGGGACTGTCCTAGATGACCAGCGAGGGCTTTT
CTAGGGCCATCCTACTGTCCTACTTTACCGTGACATCCATCACACCACAA
GCACACAGCGCCTTAATCATGCCTAGGCGTCCACGGCCGTTGCCCTCCCT
TCTTCTCCTCCTCATCCTCCTCTTCCTCCTCCCCCACTCCACGCTCCCTT
CCTCCCAACCTCTTCCCCTATCTGCCGCCTCCTCCTCTTCGAGCCCTCCT
CCTCCTCCACCATCACCATCTGCTTACGTGGATTTGCTGCACGACCCATG
TTTTGTCACGAGCAACGACATTCGAGATTTCAACATGTATGGTTTCAAAC
GCTGGCATAACGGAAGCACTTTGGGAGCCTGGACAGGTAGTTCCTCCCTC
CCTCTTTCCCTCCCACCCTCTCTCTCTCCTCCTTTCTTCCCAAATCAGGT
CCTCACCATTATTCTTACCACCGCACACCTACCAGTCACCTCTGGTGCCG
TGGATCAATACCTTGCCCCCGCTGTTGCCCAGAGCGCCGCCGCCAACCCC
AGAGGGTACCCCCCCCTCTGGCCCCTTCCTTCCCCCCTCCCTCCCTCCTG
CACCTCACTCTTGGACATCAACAGTGATGACGCCGCCAGTATTTCACAAG
CGGTGAGAGTGCGGGAGGGAAGGAGGTACCGGCTGAGTTTTTTGTTTGCC
GGGGATGCCCTGTCTTTGCATTTGCCCTCTTCAGGAGTAGGAGGAGGAGG
AGGAGGAGGAGGGGATATAAGGAGTGGTGGCGCAACTGCAGGAACACCAT
CAGGAGAAGGAGCAAAAGCAGGAGTGACACCAGGCCCTCCACCTTCCCAC
CAAGGATTGCCGCCGTTCAAATCGTTTTCGGTGTCGTGGCAAGGGACGGA
GGTCGGGCAGGTCTTCATTAATACGCTGGACCCCAGCACGGCGGGCAACG
GTTGGGATTCTGCGAGCTACGACGTGACTGCTCTTTCGGAGGAAGAACGA
CTCAGTCTCGAGGCCATAGAAAGGAAGAAATTTGGCAATAAGGGAGGTAA
GAAGCACGAGAAGAAGAAGGAGAAGAAGAAGGAGAAGAAGGAGGAGGAGA
AGGAAATTGAGAAGGCGGCAAAGGAGCGTGAGAACCTGATAATGCAGGCA
CGAGAGGAGGGTGAGAAGGAGAAATGGCTCACAGCCATCATCAACATCAC
CTCCACCACTAAGGGAAAAAGCAGTTTGTTCCTCACCGACGTCCATCTGT
ACGACCTCTCCACCCCCCTCCCTACTTCCCTCCCTTCCTCCTCCCCTTCC
TTTTCCACCTCTCGTATAATATTTCTGGTGGTCGCGCTCGGCATGGGGTT
GACTCTTTTTTGTTTGTTAGTGAATGTGTTGGCGTCGGCCAAGGGGGGCT
GGCGCTGGGACAAGCTCTCGCAGTGGCACAGAATGGAGGAGGAGGAGGAG
GAGGAGGAGATAGAGGAGGATGGGGGGGAAGGACTGAGAGGCTTGTATTA
TTATCCATCGTTGGAAATGCCGAGGAGGACGATGGAGGAAGGGGAGGAGG
TAAAGGGAAAAGGAGGGTGGGAGGACAGGAGGGACGATGAGGAGGAGGTA
CTTTTTCAGAGGGAGCGGGGACGAGGAAGGAGGGAGGGACGGAGAGAGGG
GAATGGGCTGCCGTCGGTGAGGCACCAAAGGGAGGAGGGGTACGGAAGCA
CGGGCTCTCGAAGAGATGGTGGCGGAGGAAGAGGAAAAGGAGACGGTGGA
GAAAGAGAGATTGATGTATAGGAAGGGAGGGAGGCATTGAGTGATATAAG
ACGGGTAATCGGGGAATTTTGATGAGCCGGGAGAAATAACAAGGAGAAGT
CGCCAAAACCAAATGGCAGATGCGATAGATGAGTGACAGAATGATCAGAA
GCTCAAATTAAACGGAAAACAAAATAAATGTGGTGTTGACCCACGAATGT
CAAAATACAAACATAGAAGAAGAGGAATTACGAAAATGAAAAAATAAGAA
GAATCTGAAAATAAAATAAGAGTGAAGGCTAAGCTTGCCAAATTATTAAA
ATGCACGCATTTTACAATGC back to topCoding sequence (CDS) from alignment at chr28:352486..355905- >NO28G01140.1 ID=NO28G01140.1|Name=NO28G01140.1|organism=Nannochloropsis oceanica|type=CDS|length=1641bp|location=Sequence derived from alignment at chr28:352486..355905- (Nannochloropsis oceanica)
ATGACCAGCGAGGGCTTTTCTAGGGCCATCCTACTGTCCTACTTTACCGT
GACATCCATCACACCACAAGCACACAGCGCCTTAATCATGCCTAGGCGTC
CACGGCCGTTGCCCTCCCTTCTTCTCCTCCTCATCCTCCTCTTCCTCCTC
CCCCACTCCACGCTCCCTTCCTCCCAACCTCTTCCCCTATCTGCCGCCTC
CTCCTCTTCGAGCCCTCCTCCTCCTCCACCATCACCATCTGCTTACGTGG
ATTTGCTGCACGACCCATGTTTTGTCACGAGCAACGACATTCGAGATTTC
AACATGTATGGTTTCAAACGCTGGCATAACGGAAGCACTTTGGGAGCCTG
GACAGTCACCTCTGGTGCCGTGGATCAATACCTTGCCCCCGCTGTTGCCC
AGAGCGCCGCCGCCAACCCCAGAGGGTACCCCCCCCTCTGGCCCCTTCCT
TCCCCCCTCCCTCCCTCCTGCACCTCACTCTTGGACATCAACAGTGATGA
CGCCGCCAGTATTTCACAAGCGGTGAGAGTGCGGGAGGGAAGGAGGTACC
GGCTGAGTTTTTTGTTTGCCGGGGATGCCCTGTCTTTGCATTTGCCCTCT
TCAGGAGTAGGAGGAGGAGGAGGAGGAGGAGGGGATATAAGGAGTGGTGG
CGCAACTGCAGGAACACCATCAGGAGAAGGAGCAAAAGCAGGAGTGACAC
CAGGCCCTCCACCTTCCCACCAAGGATTGCCGCCGTTCAAATCGTTTTCG
GTGTCGTGGCAAGGGACGGAGGTCGGGCAGGTCTTCATTAATACGCTGGA
CCCCAGCACGGCGGGCAACGGTTGGGATTCTGCGAGCTACGACGTGACTG
CTCTTTCGGAGGAAGAACGACTCAGTCTCGAGGCCATAGAAAGGAAGAAA
TTTGGCAATAAGGGAGGTAAGAAGCACGAGAAGAAGAAGGAGAAGAAGAA
GGAGAAGAAGGAGGAGGAGAAGGAAATTGAGAAGGCGGCAAAGGAGCGTG
AGAACCTGATAATGCAGGCACGAGAGGAGGGTGAGAAGGAGAAATGGCTC
ACAGCCATCATCAACATCACCTCCACCACTAAGGGAAAAAGCAGTTTGTT
CCTCACCGACGTCCATCTGTACGACCTCTCCACCCCCCTCCCTACTTCCC
TCCCTTCCTCCTCCCCTTCCTTTTCCACCTCTCGTATAATATTTCTGGTG
GTCGCGCTCGGCATGGGGTTGACTCTTTTTTGTTTGTTAGTGAATGTGTT
GGCGTCGGCCAAGGGGGGCTGGCGCTGGGACAAGCTCTCGCAGTGGCACA
GAATGGAGGAGGAGGAGGAGGAGGAGGAGATAGAGGAGGATGGGGGGGAA
GGACTGAGAGGCTTGTATTATTATCCATCGTTGGAAATGCCGAGGAGGAC
GATGGAGGAAGGGGAGGAGGTAAAGGGAAAAGGAGGGTGGGAGGACAGGA
GGGACGATGAGGAGGAGGTACTTTTTCAGAGGGAGCGGGGACGAGGAAGG
AGGGAGGGACGGAGAGAGGGGAATGGGCTGCCGTCGGTGAGGCACCAAAG
GGAGGAGGGGTACGGAAGCACGGGCTCTCGAAGAGATGGTGGCGGAGGAA
GAGGAAAAGGAGACGGTGGAGAAAGAGAGATTGATGTATAG back to top
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