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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr27 | genome | chr27:619057..622835 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO27G01840.2 ID=NO27G01840.2|Name=NO27G01840.2|organism=Nannochloropsis oceanica|type=mRNA|length=2852bp
ACTTGACTTTATTAATTGACCCTTCCTTCCCGCATCTCGTACACAAATCG
TTGCACTGCCAGTGGATTATGAATCAAGAGACGGGCAAACGGAATCAAAA
GCCCTGCCTCCACTGCAGCCGAGACAAGGTGAAATGTGACGGTAATTTCC
CCTGCGACCGCTGCTTTGAACGCTCTTACCGCTGCAGCAAAAATACTTCT
CTTCCTCTTCCTCGTTCTCATCTTCCTGATTATCCTCTGGCAAGCACTCG
TTCTCGTTACCGTCGCCGCAGCCTCGCCAGTGGCGAAAGTGAAAGTCAAG
CTGTCGCACCGGAGGAAGGGGAGAAAGGGAGGGAGGAGGGGGAAGCCAAC
GAGGTCGAGACTCCCTTTGCGGATCTAGTATTTTCGCGGAATGACCCCTT
GAGTCAAGTCCCATACGCTCTGACGGCCTTTCATCGTCTCCATGCCGAAG
GACGTATAAGTCGAGAGCGCGTTGTGACTCGCCTACGCATGTGGCAGGCC
TGGTCCCTCGCTGTCGGGCGCGACGTCACCTACTCACTTTCTTCCGCCAT
AGCCAAAGCTCTCTCCATCACCCCTATCGAGCTCGAAAGCCCGTCCACCC
TCCTCACCTCCCCCCCGTGCTCTGCCCTCCGAGCCGAGACCATCGGCAAG
TTCCACCGGATCGCCGTAGCCAGCCAGGCTCTCCGGGGCACGCCGTTCTT
CATTTCAGCCAACGACGAGAGCCGGGCATGTATATTTTCAATAAGCGACC
CGGAGAGCGACTATATCGTCCAGACGGCCAACGATATCTGCCAAAAATGG
CTCATCGACCCTCAGTCCGACTTGGAGGCCCAGATCCTTGGAAGGCACGC
CATTCAGCTGCTCGTTCACCCTGCTTTGGTGTGCCGGGAGGACCGTGTGA
CATACGCCGAATCGATGTTAATCCTCGGCATGACAGAAATGACCCCCTCG
AAGCAGTCCTTTCTCTTGAAGGGTTGTCCGAGGGATGGAGAGGCGAAGCT
CTTCCTCATCACCAACCATCAGGTGCTCTTGCCGGTGCCTGTACCTTCAT
CGGCGGGGAAGGGGGGAGGTCTGTCTGAAGAGGGCAAAGCGAGAGGGGCG
ATGGGGGGGGCACGGTATGTATATGCGGCCCTCCAATACATCGATATTTG
TCCTCCCTCTCGCCATATTACCGACCAGCCGGGAAAAAGATACATGAAAT
GCGCCCGCAATTTCCGGAGGGACAATAATCTGTCACGATGGCCGCTGCCC
TCCCCCTCCTCCCTCCCGCCCTCTTCCCCTTTCTCTCTCTCCACCTCCCT
TCCACCCCCTTTGCCGTTTCCCGCGCACTTGTCCTCGTTATCGCCCACCA
TCTCATCTATTTCTTCGTCCTCCGCCACGACCGACTGTTGTTACAGTGGA
CCATGCTCTCTCTTCGTGCCACCAGCGCGAGAAAAGCGAGCGAAGATGAC
CCGAAGCGAAGGAGAAGGAGGAGATGGAGAAGGAAGAGGAGAAGGAGGAA
AAAGAGGAAACGATACAGCAGCAGCAGCAGCAGCAGCAGCAGCACAAGGA
GTACGAGAAACAACAAAAACAGCAGGAGGAGCAGCAGCAGCATGTTTGGA
AGTGGATATGCAGGTCTCTACCGGTATTGGGGCCATACTTGACTTCGTCG
ATAATAACGGTAGTGCAGCCGTTGTCCAAGCAGCAGCAGCAGTAGCAGCA
TCGACAACGACAGCCTCAGTTGGTGGAGGGATAACAGCACCCCGAGGGCA
TACAGACACCGACTCGTGTTTGCACAACCCGAGACAGAATAGCGGTGAGA
ATGTGCTCAAAGAGGACTGCAAAGACGATAACCATCAACACCACCACCAC
CAGCAGCGGCAGCAGCAGCAGCAGCAGCGGTGGGTGCCGGCAGAAGGCAC
AGTCGTGCCAGGGTTTGCTACCCTTCCCTTGCCTCTCTCGCTCTCGCGGC
CACCTACCAGCCGCAGCAGCAGCAAGAACGAAGTAGATAGCAAGGGAGAC
AGAACGGGCATGGAGGAGGAAAAAGTTGCATGCACACACGAGGATTTGCA
TAACAAGAGAAAGGGAAGGAACAGGGGAAAGCAAGAAGGGAGGGAGGGAG
TAGGGATTAAGATGAAGGCGGAGGGAGAAGACGGGAAGGATGAAGACCAC
GAGGATGAGGAGGAAGGGGCCCAAAATCTTCTCTTAAGCATCTTCCCGCG
TGCCTCGCTGCCCTCTTCCCGACGTGACTTATCTCATAAGTCTGGCTCGT
CCTCGTCGTCGTCATCCTCCTTCTCTTCCAGCTTCTCCTCCAGTGGTGCG
CATGCCCAATCTGGCCGCCTCTCGTCTCCGTTGACTCTGCAAGGGCTGCA
GCCAGAAGGAGGCGAAAGACAAGGGAAAGAAAGAGGCTACGAACGAGAAA
AGAGAAGGGAAAGAGGAAGGGGAAGAGGTGGGCGAAGAGGAGCAAGAAGG
ACCGGAGACCAAAAAGGAAGAGGAAAAGGTCGGGGAGGTGGTGATGATGC
CAGAATGGATGGAGAGGGAGAAAGTACAGAGCGTGTTGCCTCAAATTCTG
CGATTTGGCACTGGGAAGACGAAAGAGTGGGAGAGAAAGCGGATGAAAAT
ACGAGGGCTAGTGCGGTCCCTGTATTGGACGATGAGGTTTTGAAGATGCT
TTTTGATGAAGGCAGCGGCTGAGTCCTTCTAACTGTTTCATACTTAAACA
ACATGTTGTAAATTTACTAATTCAAAGAATGAAGTCGTGTACATTCTTCC
CGAGGCCCCACCTCTGGGTCTCGCACCTCCATTCCTCAATGTTTGTATGA
ATTGTTTCAACTCTACCTGGCAGACATGTCTTCGAAAGGAATTAGAATTT
TG back to topprotein sequence of NO27G01840.2 >NO27G01840.2-protein ID=NO27G01840.2-protein|Name=NO27G01840.2|organism=Nannochloropsis oceanica|type=polypeptide|length=868bp
MNQETGKRNQKPCLHCSRDKVKCDGNFPCDRCFERSYRCSKNTSLPLPRS
HLPDYPLASTRSRYRRRSLASGESESQAVAPEEGEKGREEGEANEVETPF
ADLVFSRNDPLSQVPYALTAFHRLHAEGRISRERVVTRLRMWQAWSLAVG
RDVTYSLSSAIAKALSITPIELESPSTLLTSPPCSALRAETIGKFHRIAV
ASQALRGTPFFISANDESRACIFSISDPESDYIVQTANDICQKWLIDPQS
DLEAQILGRHAIQLLVHPALVCREDRVTYAESMLILGMTEMTPSKQSFLL
KGCPRDGEAKLFLITNHQVLLPVPVPSSAGKGGGLSEEGKARGAMGGARY
VYAALQYIDICPPSRHITDQPGKRYMKCARNFRRDNNLSRWPLPSPSSLP
PSSPFSLSTSLPPPLPFPAHLSSLSPTISSISSSSATTDCCYSGPCSLFV
PPAREKRAKMTRSEGEGGDGEGRGEGGKRGNDTAAAAAAAAAQGVRETTK
TAGGAAAACLEVDMQVSTGIGAILDFVDNNGSAAVVQAAAAVAASTTTAS
VGGGITAPRGHTDTDSCLHNPRQNSGENVLKEDCKDDNHQHHHHQQRQQQ
QQQRWVPAEGTVVPGFATLPLPLSLSRPPTSRSSSKNEVDSKGDRTGMEE
EKVACTHEDLHNKRKGRNRGKQEGREGVGIKMKAEGEDGKDEDHEDEEEG
AQNLLLSIFPRASLPSSRRDLSHKSGSSSSSSSSFSSSFSSSGAHAQSGR
LSSPLTLQGLQPEGGERQGKERGYEREKRRERGRGRGGRRGARRTGDQKG
RGKGRGGGDDARMDGEGESTERVASNSAIWHWEDERVGEKADENTRASAV
PVLDDEVLKMLFDEGSG* back to topmRNA from alignment at chr27:619057..622835+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO27G01840.2 ID=NO27G01840.2|Name=NO27G01840.2|organism=Nannochloropsis oceanica|type=mRNA|length=3779bp|location=Sequence derived from alignment at chr27:619057..622835+ (Nannochloropsis oceanica)
ACTTGACTTTATTAATTGACCCTTCCTTCCCGCATCTCGTACACAAATCG
TTGCACTGCCAGTGGATTATGAATCAAGAGACGGGCAAACGGAATCAAAA
GCCCTGCCTCCACTGCAGGTAAGCACAATGTGGTGTTCCTCGTCCGTAAG
CCCCTGTCCTTTTTCTGATCTGTTGGAAGGCCCCGGGTGACGTGGGTGCG
CTGATGGTGACTTGGTGATTTTGCTTGACCAAGTCAAGGGATGCGGATGG
AGGGCTTCTTGTATAGTACTCACTTTACAACTTTTACCGCATTTACACTC
GCACATGCACTCGACAGCCGAGACAAGGTGAAATGTGACGGTAATTTCCC
CTGGTAAGTGTGTGCCGTTTGTCTGGTGAATGAGCTTCCTCCCATCAATG
TCAGCCAGAACAATGGGCGGGGCTATCCGGTCGAAGTACGGTTATCCTTT
CTTCCATGTAATCGCAAGAAGCCATTTCTCGTACTTGCTTGAGGCTGTCG
CTGTTTGAGTAATAAGCAAGTCCTCTCGGTCCAGGCATGGGTGGTATTCG
ATATGGGATGTGTCGTTGATGGGGAGGAGTGAATGAGGAAGACGGAGGGA
GGGAGAGAGGGAGTGGGAAAAGGGAGGGGATACGAACAAGGAAGGGAAGG
ACGGCTGCACGACTGGTTGATGAGTGCCAGAAAGCTAGAAAAAGGAAGAG
TAAGTTGATTGAGTGCTGAAGGTGATGGTACATTGTGAAAATAATCGTCA
AATCCACACCCACCCACACAGCGACCGCTGCTTTGAACGCTCTTACCGCT
GCAGCAAAAATACTTCTCTTCCTCTTCCTCGTTCTCATCTTCCTGATTAT
CCTCTGGCAAGCACTCGTTCTCGTTACCGTCGCCGCAGCCTCGCCAGTGG
CGAAAGTGAAAGTCAAGCTGTCGCACCGGAGGAAGGGGAGAAAGGGAGGG
AGGAGGGGGAAGCCAACGAGGTCGAGACTCCCTTTGCGGATCTAGTATTT
TCGCGGAATGACCCCTTGAGTCAAGTCCCATACGCTCTGACGGCCTTTCA
TCGTCTCCATGCCGAAGGACGTATAAGTCGAGAGCGCGTTGTGACTCGCC
TACGCATGTGGCAGGCCTGGTACGTCTGTTTATGTTTGGTTTCTTCTCTC
CCTGTCTTTCCTCCATGCACAGCCATTAAATAATCGTTACTTACACTATG
TGATGAATCGCTGCTTGACACCTTATTTGGGTTCATGCCAGGTCCCTCGC
TGTCGGGCGCGACGTCACCTACTCACTTTCTTCCGCCATAGCCAAAGCTC
TCTCCATCACCCCTATCGAGCTCGAAAGCCCGTCCACCCTCCTCACCTCC
CCCCCGTGCTCTGCCCTCCGAGCCGAGACCATCGGCAAGTTCCACCGGAT
CGCCGTAGCCAGCCAGGTCCGTCGACGTGATGTCATGTTGGTGATGATGA
TCGTCCTGCATCGTTCCCCTCCTCCCTTTCTTGCGATCTATGTTTCATCG
CTTCTCTCCCGGCTCCAAGAATCATCAAGTCCACGCTAATTTAAATTTCT
CATTTCCCCCCTCCCTCCTCCCATCCCCCTCCCCCCTCTCTATCCATCCT
CCAGGCTCTCCGGGGCACGCCGTTCTTCATTTCAGCCAACGACGAGAGCC
GGGCATGTATATTTTCAATAAGCGACCCGGAGAGCGACTATATCGTCCAG
ACGGCCAACGATATCTGCCAAAAATGGCTCATCGACCCTCAGTCCGACTT
GGAGGCCCAGATCCTTGGAAGGCACGCCATTCAGCTGCTCGTTCACCCTG
CTTTGGTGTGCCGGGAGGACCGTGTGACATACGCCGAATCGATGTTAATC
CTCGGCATGACAGAAATGACCCCCTCGAAGCAGTCCTTTCTCTTGAAGGG
TTGTCCGAGGGATGGAGAGGCGAAGCTCTTCCTCATCACCAACCATCAGG
TGCTCTTGCCGGTGCCTGTACCTTCATCGGCGGGGAAGGGGGGAGGTCTG
TCTGAAGAGGGCAAAGCGAGAGGGGCGATGGGGGGGGCACGGTATGTATA
TGCGGCCCTCCAATACATCGATATTTGTCCTCCCTCTCGCCATATTACCG
ACCAGCCGGGAAAAAGATACATGAAATGCGCCCGCAATTTCCGGAGGGAC
AATAATCTGTCACGATGGCCGCTGCCCTCCCCCTCCTCCCTCCCGCCCTC
TTCCCCTTTCTCTCTCTCCACCTCCCTTCCACCCCCTTTGCCGTTTCCCG
CGCACTTGTCCTCGTTATCGCCCACCATCTCATCTATTTCTTCGTCCTCC
GCCACGACCGACTGTTGTTACAGTGGACCATGCTCTCTCTTCGTGCCACC
AGCGCGAGAAAAGCGAGCGAAGATGACCCGAAGCGAAGGAGAAGGAGGAG
ATGGAGAAGGAAGAGGAGAAGGAGGAAAAAGAGGAAACGATACAGCAGCA
GCAGCAGCAGCAGCAGCAGCACAAGGAGTACGAGAAACAACAAAAACAGC
AGGAGGAGCAGCAGCAGCATGTTTGGAAGTGGATATGCAGGTCTCTACCG
GTATTGGGGCCATACTTGACTTCGTCGATAATAACGGTAGTGCAGCCGTT
GTCCAAGCAGCAGCAGCAGTAGCAGCATCGACAACGACAGCCTCAGTTGG
TGGAGGGATAACAGCACCCCGAGGGCATACAGACACCGACTCGTGTTTGC
ACAACCCGAGACAGAATAGCGGTGAGAATGTGCTCAAAGAGGACTGCAAA
GACGATAACCATCAACACCACCACCACCAGCAGCGGCAGCAGCAGCAGCA
GCAGCGGTGGGTGCCGGCAGAAGGCACAGTCGTGCCAGGGTTTGCTACCC
TTCCCTTGCCTCTCTCGCTCTCGCGGCCACCTACCAGCCGCAGCAGCAGC
AAGAACGAAGTAGATAGCAAGGGAGACAGAACGGGCATGGAGGAGGAAAA
AGTTGCATGCACACACGAGGATTTGCATAACAAGAGAAAGGGAAGGAACA
GGGGAAAGCAAGAAGGGAGGGAGGGAGTAGGGATTAAGATGAAGGCGGAG
GGAGAAGACGGGAAGGATGAAGACCACGAGGATGAGGAGGAAGGGGCCCA
AAATCTTCTCTTAAGCATCTTCCCGCGTGCCTCGCTGCCCTCTTCCCGAC
GTGACTTATCTCATAAGTCTGGCTCGTCCTCGTCGTCGTCATCCTCCTTC
TCTTCCAGCTTCTCCTCCAGTGGTGCGCATGCCCAATCTGGCCGCCTCTC
GTCTCCGTTGACTCTGCAAGGGCTGCAGCCAGAAGGAGGCGAAAGACAAG
GGAAAGAAAGAGGCTACGAACGAGAAAAGAGAAGGGAAAGAGGAAGGGGA
AGAGGTGGGCGAAGAGGAGCAAGAAGGACCGGAGACCAAAAAGGAAGAGG
AAAAGGTCGGGGAGGTGGTGATGATGCCAGAATGGATGGAGAGGGAGAAA
GTACAGAGCGTGTTGCCTCAAATTCTGCGATTTGGCACTGGGAAGACGAA
AGAGTGGGAGAGAAAGCGGATGAAAATACGAGGGCTAGTGCGGTCCCTGT
ATTGGACGATGAGGTTTTGAAGATGCTTTTTGATGAAGGCAGCGGCTGAG
TCCTTCTAACTGTTTCATACTTAAACAACATGTTGTAAATTTACTAATTC
AAAGAATGAAGTCGTGTACATTCTTCCCGAGGCCCCACCTCTGGGTCTCG
CACCTCCATTCCTCAATGTTTGTATGAATTGTTTCAACTCTACCTGGCAG
ACATGTCTTCGAAAGGAATTAGAATTTTG back to topCoding sequence (CDS) from alignment at chr27:619057..622835+ >NO27G01840.2 ID=NO27G01840.2|Name=NO27G01840.2|organism=Nannochloropsis oceanica|type=CDS|length=2604bp|location=Sequence derived from alignment at chr27:619057..622835+ (Nannochloropsis oceanica)
ATGAATCAAGAGACGGGCAAACGGAATCAAAAGCCCTGCCTCCACTGCAG
CCGAGACAAGGTGAAATGTGACGGTAATTTCCCCTGCGACCGCTGCTTTG
AACGCTCTTACCGCTGCAGCAAAAATACTTCTCTTCCTCTTCCTCGTTCT
CATCTTCCTGATTATCCTCTGGCAAGCACTCGTTCTCGTTACCGTCGCCG
CAGCCTCGCCAGTGGCGAAAGTGAAAGTCAAGCTGTCGCACCGGAGGAAG
GGGAGAAAGGGAGGGAGGAGGGGGAAGCCAACGAGGTCGAGACTCCCTTT
GCGGATCTAGTATTTTCGCGGAATGACCCCTTGAGTCAAGTCCCATACGC
TCTGACGGCCTTTCATCGTCTCCATGCCGAAGGACGTATAAGTCGAGAGC
GCGTTGTGACTCGCCTACGCATGTGGCAGGCCTGGTCCCTCGCTGTCGGG
CGCGACGTCACCTACTCACTTTCTTCCGCCATAGCCAAAGCTCTCTCCAT
CACCCCTATCGAGCTCGAAAGCCCGTCCACCCTCCTCACCTCCCCCCCGT
GCTCTGCCCTCCGAGCCGAGACCATCGGCAAGTTCCACCGGATCGCCGTA
GCCAGCCAGGCTCTCCGGGGCACGCCGTTCTTCATTTCAGCCAACGACGA
GAGCCGGGCATGTATATTTTCAATAAGCGACCCGGAGAGCGACTATATCG
TCCAGACGGCCAACGATATCTGCCAAAAATGGCTCATCGACCCTCAGTCC
GACTTGGAGGCCCAGATCCTTGGAAGGCACGCCATTCAGCTGCTCGTTCA
CCCTGCTTTGGTGTGCCGGGAGGACCGTGTGACATACGCCGAATCGATGT
TAATCCTCGGCATGACAGAAATGACCCCCTCGAAGCAGTCCTTTCTCTTG
AAGGGTTGTCCGAGGGATGGAGAGGCGAAGCTCTTCCTCATCACCAACCA
TCAGGTGCTCTTGCCGGTGCCTGTACCTTCATCGGCGGGGAAGGGGGGAG
GTCTGTCTGAAGAGGGCAAAGCGAGAGGGGCGATGGGGGGGGCACGGTAT
GTATATGCGGCCCTCCAATACATCGATATTTGTCCTCCCTCTCGCCATAT
TACCGACCAGCCGGGAAAAAGATACATGAAATGCGCCCGCAATTTCCGGA
GGGACAATAATCTGTCACGATGGCCGCTGCCCTCCCCCTCCTCCCTCCCG
CCCTCTTCCCCTTTCTCTCTCTCCACCTCCCTTCCACCCCCTTTGCCGTT
TCCCGCGCACTTGTCCTCGTTATCGCCCACCATCTCATCTATTTCTTCGT
CCTCCGCCACGACCGACTGTTGTTACAGTGGACCATGCTCTCTCTTCGTG
CCACCAGCGCGAGAAAAGCGAGCGAAGATGACCCGAAGCGAAGGAGAAGG
AGGAGATGGAGAAGGAAGAGGAGAAGGAGGAAAAAGAGGAAACGATACAG
CAGCAGCAGCAGCAGCAGCAGCAGCACAAGGAGTACGAGAAACAACAAAA
ACAGCAGGAGGAGCAGCAGCAGCATGTTTGGAAGTGGATATGCAGGTCTC
TACCGGTATTGGGGCCATACTTGACTTCGTCGATAATAACGGTAGTGCAG
CCGTTGTCCAAGCAGCAGCAGCAGTAGCAGCATCGACAACGACAGCCTCA
GTTGGTGGAGGGATAACAGCACCCCGAGGGCATACAGACACCGACTCGTG
TTTGCACAACCCGAGACAGAATAGCGGTGAGAATGTGCTCAAAGAGGACT
GCAAAGACGATAACCATCAACACCACCACCACCAGCAGCGGCAGCAGCAG
CAGCAGCAGCGGTGGGTGCCGGCAGAAGGCACAGTCGTGCCAGGGTTTGC
TACCCTTCCCTTGCCTCTCTCGCTCTCGCGGCCACCTACCAGCCGCAGCA
GCAGCAAGAACGAAGTAGATAGCAAGGGAGACAGAACGGGCATGGAGGAG
GAAAAAGTTGCATGCACACACGAGGATTTGCATAACAAGAGAAAGGGAAG
GAACAGGGGAAAGCAAGAAGGGAGGGAGGGAGTAGGGATTAAGATGAAGG
CGGAGGGAGAAGACGGGAAGGATGAAGACCACGAGGATGAGGAGGAAGGG
GCCCAAAATCTTCTCTTAAGCATCTTCCCGCGTGCCTCGCTGCCCTCTTC
CCGACGTGACTTATCTCATAAGTCTGGCTCGTCCTCGTCGTCGTCATCCT
CCTTCTCTTCCAGCTTCTCCTCCAGTGGTGCGCATGCCCAATCTGGCCGC
CTCTCGTCTCCGTTGACTCTGCAAGGGCTGCAGCCAGAAGGAGGCGAAAG
ACAAGGGAAAGAAAGAGGCTACGAACGAGAAAAGAGAAGGGAAAGAGGAA
GGGGAAGAGGTGGGCGAAGAGGAGCAAGAAGGACCGGAGACCAAAAAGGA
AGAGGAAAAGGTCGGGGAGGTGGTGATGATGCCAGAATGGATGGAGAGGG
AGAAAGTACAGAGCGTGTTGCCTCAAATTCTGCGATTTGGCACTGGGAAG
ACGAAAGAGTGGGAGAGAAAGCGGATGAAAATACGAGGGCTAGTGCGGTC
CCTGTATTGGACGATGAGGTTTTGAAGATGCTTTTTGATGAAGGCAGCGG
CTGA back to top
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