NO27G01460.1, NO27G01460.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO27G01460.1
Unique Name	NO27G01460.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3147
Alignment location	chr27:475791..480951 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr27	genome	chr27:475791..480951 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO27G01460.1 vs.
Match: GAX99864.1 (exosome complex exonuclease RRP4 [Pythium insidiosum])

HSP 1 Score: 235.7 bits (600), Expect = 6.400e-58
Identity = 133/282 (47.16%), Postives = 181/282 (64.18%), Query Frame = 0

Query:  722 VVAVPGQVLIEADRDKEGGLAFIRGHGTYQEEDDVAPAAAMEEERERRGGKVRLCACNGGIIERVNKLVTVLPPKTRYQGAIGDLVVGRITEVGAKRWKVDLRGHKDAVLQLSAVILPDGLQRIRGHEDVLQMRRFYQEKDLISAEVQNIMSDGTVHLHTRTVRYGKLQNGLLVYVRPSLVRRSKHHFITLPRQGVDVILGVNGYVWVSRSLSLSREGGLEGGREEELQTG----KAEVLLALQGAHAARPTTSQERLQIARVRNALLLLDQAFLSISSETI 1000
            VV  PG+V+       E G AF+RGHGTY   +++  + A                   G++E+VN+L+TV P  +RY G +GD+VVGR+TEVG KRWKVD+ G +DA L LS+V LP G QR R +ED LQMR F+ E DLISAE+Q +  DG++ LHTR++RYGKL+NG  V VRPSLV+R K H +TLP  GVDVILG NGY+W+SRSLS + +G  +    E+   G    + EVL   +  HAA   + ++R +IARV  A+L L++ F  I+ ++I
Sbjct:   29 VVVTPGEVI-----STETG-AFLRGHGTYLSNNELVASVA-------------------GVVEKVNQLITVRPLVSRYIGEVGDIVVGRVTEVGNKRWKVDVNGQQDAGLMLSSVTLPGGAQRRRTYEDQLQMRSFFVENDLISAEIQEVRYDGSLSLHTRSLRYGKLENGQFVAVRPSLVKRMKQHMVTLPTLGVDVILGTNGYLWISRSLS-ALDGVDDVASTEDTGPGSMETRVEVLTHKRQRHAATKMSHEDREKIARVYRAVLQLNEQFRVITPDSI 284

The following BLAST results are available for this feature:

BLAST of NO27G01460.1 vs.

BLAST of NO27G01460.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
GAX99864.1	6.400e-58	47.16	exosome complex exonuclease RRP4 [Pythium insidios...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO27G01460	NO27G01460	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO27G01460.1	NO27G01460.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO27G01460.1.cds1	NO27G01460.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01460.1.cds2	NO27G01460.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01460.1.cds3	NO27G01460.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01460.1.cds4	NO27G01460.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01460.1.cds5	NO27G01460.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01460.1.cds6	NO27G01460.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01460.1.cds7	NO27G01460.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01460.1.cds8	NO27G01460.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO27G01460.1.cds9	NO27G01460.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr27:475791..480951-
coding sequence from alignment at chr27:475791..480951-

mRNA sequence

>NO27G01460.1 ID=NO27G01460.1|Name=NO27G01460.1|organism=Nannochloropsis oceanica|type=mRNA|length=3147bp
ATGGCGCAGCTTGGACTGACTGGTCGAGCCGGGGCCATTCTGCTACTGGC
GATTGCCACCAGCAACCTCCACGGCATTGCGGAGGGGAAGACAGCGACGA
CAATTCTTGCTCACCCGGCAACAGCGGCGCGCGACGTGATCCTGACGGCC
GATGGTTCCAGCCCATCTCCTCACTCAAATTCAATCCTCGCCACTGAGCC
TGCCTCGGGCCTCTTCTACCTTGACAACATCGTGGACGAAGCTTCCATTA
CCATGCTCAAAACCCGTTTCAATCTGACAATGCAAACGGCTTCGGTGGAT
GGCCGTAGAATGATGGACGTGCCAATTGGGGTTGTGGCCAGGCTCGGGAC
AGCGCTACAGTATCGTCGCCTTGATTCAGTGATATTGCATGGTAATGATG
CCAGTGACGACAACGACAAGTATTTCAAGCACGGCCAAGCGCGATTTCAG
CTGCCTATCCAGGAGCACAAAAACGGGTTTGGGAACCACAAGGATCACTA
TTACCAGACCACTCTGCATGAAAAGCACGTGGTAGTAGAAGGCCAAGTGG
GAATTCTCTACTTGGATGGCGACGGTCAAATGATTTTTACGAACGACGAG
ACCAAAGCGGAGACCTCCATTGGCATTGTTGCAGGGCGCTTTATCGCCTG
GAATAACGCAGCCTTTACTCATCGCGTGGTGCACGGGCCGTTCAATATCA
TGCGGCGTATGATGGGACCTATGACATGGAATAATGTGGCTCAGGAGGAG
ACGCCCAAAGATGGTATTGCTCAGATCTATGGTGGCTTGTTGAGTGTGTG
TGGCGGAACTTCCCCTGCTCAATGTACAAACCTGACTGATTACCGGTGCG
ATGGAAATACCTATGTAAGCACCAGCGGAGGAAACACCAGCTGGTTTGAC
TGCGCGAGTTTTTGTGACGATAATATCGGCACCACTTTAGGGTATGGTCA
ATTTGACAGCACCAATAGCGTATGCTACTGTGGAGGCAATACTTCGTGCC
CTCTTTTCACACCTGATCCTGGCTTCATCCAATTCATGTACAATAGCGGT
GACGAAGACTGTCCAACTTTGACAGTGTCGCCCACACAACAGCCTTCTAC
ACAGCCCTCCAACAGCCCCTCTGGCGCTACTGGCGCTCCCACCTCCTATC
CTACCTTTGCCCCGCCGCCGCCCGACGCACCTGTCGAGATCCTGGGGCAA
GGATTCGTGTGCGGGCCAGAGGTCACCCTTGTCAGTAGACGTCATGCCAT
GGCAGCATCAGGGGCCGATATGGAGAGGACGGAGCGAGAGAAGCAGGCAG
GAGAGGAGTTCTTATCGGAAATTGGCCGGGACTATCATCAGCAACAGGGC
GCCTTGGACGCTGCATGGACACCGGAGACCTGTTTTGCTGCCTGCGCTCA
GCGATTGGGTAATCCTCCTTCCTTCGTGATCAATATCTACAATGACGGCG
GACAGCAAGTGTGCACCTGTTGTCGCTCCTGCGATGGGACCCGCTATGTC
CCTTCTGCCCAAACCTTTGCAGCATGTGGAGGCGTTGCAATGAATCTGAG
CCTCACGGCTAAGGCGAGCCGTGCAAAGGTCGGTGCACGGCGTGGGGGCA
AGATTACGTACACCGTCCGACTCAAGAACAGGCAGGCGTTTGAAAGTGGG
GTCGGCATGCGCATAGTCCTGCCCCCTCACATGACTTATGTCAGGAGCAA
ATCCAAGCCCCCGGTGTACAGCAATGTCTCGTTGTCGGCCGCAGGTATGG
GCAGGTTGTTGTTGCAGCAAGGTCAGAAATGGGGGGCCTCGGCTGCTGCT
AATGACACCCTCGTCGATTGGCCCGTGGTGCCCATGCCTGCTAAAAAGCG
ACGCAGGTTTATAGTCTACATGCGCGTGAAAGAGAGCGCACCGAGGAATG
CCTTCCATTGGAAGGTGGAGGAGGAGGCGGAGGCGGTGGAAGCAGAGGAG
GAGGAGGCGGAGGCGGAGGAGGCGGAGGAGGAGGAGGAGGCGGAGGAGAA
CGAGGACGAGGCAGAGGAGGAGGTCATGAGCGGGCCATCCGAGGACTGTA
TTGGTGTGACACCTGTGAACAGTTCGTGTCCCGGGACGGCAATGGGGCAC
GTAACATCCTACGGGTGTACAGGAGTATGAACATTCGACACCCTCGCACA
CATTGCCGAGGCCGTGGTGGCCGTGCCAGGGCAAGTGTTGATCGAAGCCG
ATCGGGACAAGGAAGGCGGGCTTGCCTTCATTCGCGGGCACGGCACTTAC
CAAGAAGAGGATGACGTTGCACCAGCAGCAGCAATGGAGGAGGAGAGAGA
GAGAAGGGGAGGAAAGGTTCGACTTTGTGCGTGCAATGGCGGGATAATAG
AGCGGGTGAATAAGCTCGTGACAGTGCTCCCACCCAAGACACGGTATCAG
GGCGCGATCGGTGACCTGGTGGTGGGCCGCATCACCGAGGTGGGAGCCAA
GCGCTGGAAGGTAGACTTAAGAGGGCACAAGGACGCCGTTCTCCAGCTCT
CCGCCGTCATCCTTCCCGACGGCCTGCAGCGCATCCGGGGCCACGAGGAC
GTGCTCCAGATGCGACGGTTCTACCAAGAAAAGGACCTTATCAGCGCCGA
GGTCCAAAACATCATGAGCGACGGTACTGTTCACCTCCACACCCGGACCG
TGCGCTACGGCAAACTGCAGAACGGCCTACTCGTCTACGTCCGCCCCTCC
CTCGTGCGGAGAAGCAAGCACCACTTCATCACGCTGCCTCGACAGGGGGT
GGATGTCATCCTGGGCGTCAATGGCTATGTCTGGGTGTCCCGTTCCCTTT
CCCTTTCCAGGGAGGGAGGGTTGGAGGGAGGGAGGGAGGAGGAGCTACAG
ACGGGAAAAGCAGAGGTCCTCCTCGCCCTCCAAGGCGCCCACGCTGCCCG
TCCCACCACCAGTCAGGAGCGGCTGCAGATAGCCCGGGTCCGAAACGCTC
TGCTGCTGCTGGATCAGGCCTTCCTCTCCATTTCCTCCGAAACGATCGAG
CGCGTATGCGCCGTGTCGGAGGCCCTTGCCCTCCCTCCCGCACACCTTCT
CTCCCCTACCGGCGCTCAGGCCGTGCTGGCAATCCTCTTGAACGAGGACG
AGGGCTGGGGGGAGAAAGGGGAAAAGGACAAGCGATTGAAGAGCTAG

protein sequence of NO27G01460.1

>NO27G01460.1-protein ID=NO27G01460.1-protein|Name=NO27G01460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1049bp
MAQLGLTGRAGAILLLAIATSNLHGIAEGKTATTILAHPATAARDVILTA
DGSSPSPHSNSILATEPASGLFYLDNIVDEASITMLKTRFNLTMQTASVD
GRRMMDVPIGVVARLGTALQYRRLDSVILHGNDASDDNDKYFKHGQARFQ
LPIQEHKNGFGNHKDHYYQTTLHEKHVVVEGQVGILYLDGDGQMIFTNDE
TKAETSIGIVAGRFIAWNNAAFTHRVVHGPFNIMRRMMGPMTWNNVAQEE
TPKDGIAQIYGGLLSVCGGTSPAQCTNLTDYRCDGNTYVSTSGGNTSWFD
CASFCDDNIGTTLGYGQFDSTNSVCYCGGNTSCPLFTPDPGFIQFMYNSG
DEDCPTLTVSPTQQPSTQPSNSPSGATGAPTSYPTFAPPPPDAPVEILGQ
GFVCGPEVTLVSRRHAMAASGADMERTEREKQAGEEFLSEIGRDYHQQQG
ALDAAWTPETCFAACAQRLGNPPSFVINIYNDGGQQVCTCCRSCDGTRYV
PSAQTFAACGGVAMNLSLTAKASRAKVGARRGGKITYTVRLKNRQAFESG
VGMRIVLPPHMTYVRSKSKPPVYSNVSLSAAGMGRLLLQQGQKWGASAAA
NDTLVDWPVVPMPAKKRRRFIVYMRVKESAPRNAFHWKVEEEAEAVEAEE
EEAEAEEAEEEEEAEENEDEAEEEVMSGPSEDCIGVTPVNSSCPGTAMGH
VTSYGCTGV*TFDTLAHIAEAVVAVPGQVLIEADRDKEGGLAFIRGHGTY
QEEDDVAPAAAMEEERERRGGKVRLCACNGGIIERVNKLVTVLPPKTRYQ
GAIGDLVVGRITEVGAKRWKVDLRGHKDAVLQLSAVILPDGLQRIRGHED
VLQMRRFYQEKDLISAEVQNIMSDGTVHLHTRTVRYGKLQNGLLVYVRPS
LVRRSKHHFITLPRQGVDVILGVNGYVWVSRSLSLSREGGLEGGREEELQ
TGKAEVLLALQGAHAARPTTSQERLQIARVRNALLLLDQAFLSISSETIE
RVCAVSEALALPPAHLLSPTGAQAVLAILLNEDEGWGEKGEKDKRLKS*

mRNA from alignment at chr27:475791..480951-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO27G01460.1 ID=NO27G01460.1|Name=NO27G01460.1|organism=Nannochloropsis oceanica|type=mRNA|length=5161bp|location=Sequence derived from alignment at chr27:475791..480951- (Nannochloropsis oceanica)
ATGGCGCAGCTTGGACTGACTGGTCGAGCCGGGGCCATTCTGCTACTGGC
GATTGCCACCAGCAACCTCCACGGCATTGCGGAGGGGAAGACAGCGACGA
CAATTCTTGCTCACCCGGCAACAGCGGCGCGCGACGTGATCCTGACGGCC
GATGGTTCCAGCCCATCTCCTCACTCAAATTCAATCCTCGCCACTGAGCC
TGCCTCGGGCCTCTTCTACCTTGACAACATCGTGGACGAAGCTTCCATTA
CCATGCTCAAAACCCGTTTCAATCTGACAATGCAAACGGCTTCGGTGGAT
GGCCGTAGAATGATGGACGTGCCAATTGGGGTTGTGGCCAGGCTCGGGAC
AGCGCTACAGTATCGTCGCCTTGATTCAGTGATATTGCATGGTAATGATG
CCAGTGACGACAACGACAAGTATTTCAAGCACGGCCAAGCGCGATTTCAG
CTGCCTATCCAGGAGCACAAAAACGGGTTTGGGAACCACAAGGATCACTA
TTACCAGACCACTCTGCATGAAAAGCACGTGGTAGTAGAAGGCCAAGTGG
GAATTCTCTACTTGGATGGCGACGGTCAAATGATTTTTACGAACGACGAG
ACCAAAGCGGAGACCTCCATTGGCATTGTTGCAGGGCGCTTTATCGCCTG
GAATAACGCAGCCTTTACTCATCGCGTGGTGCACGGGCCGTTCAATATCA
TGCGGCGTATGATGGGACCTATGACATGGAATAATGTGGCTCAGGAGGAG
ACGCCCAAAGATGGTATTGCTCAGATCTATGGTGGCTTGTTGAGTGTGTG
TGGCGGAACTTCCCCTGCTCAATGTACAAACCTGACTGATTACCGGTGCG
ATGGAAATACCTATGTAAGCACCAGCGGAGGAAACACCAGCTGGTTTGAC
TGCGCGAGTTTTTGTGACGATAATATCGGCACCACTTTAGGGTATGGTCA
ATTTGACAGCACCAATAGCGTATGCTACTGTGGAGGCAATACTTCGTGCC
CTCTTTTCACACCTGATCCTGGCTTCATCCAATTCATGTACAATAGCGGT
GACGAAGACTGTCCAACTTTGACAGTGTCGCCCACACAACAGCCTTCTAC
ACAGCCCTCCAACAGCCCCTCTGGCGCTACTGGCGCTCCCACCTCCTATC
CTACCTTTGCCCCGCCGCCGCCCGACGCACCTGTCGAGATCCTGGGGCAA
GGATTCGTGTGCGGGCCAGAGGTCACCCTTGTCAGTAGACGTCATGCCAT
GGCAGCATCAGGGGCCGATATGGAGAGGACGGAGCGAGAGAAGCAGGCAG
GAGAGGAGTTCTTATCGGAAATTGGCCGGGACTATCATCAGCAACAGGGC
GCCTTGGACGCTGCATGGACACCGGAGACCTGTTTTGCTGCCTGCGCTCA
GCGATTGGGTAATCCTCCTTCCTTCGTGATCAATATCTACAATGACGGCG
GACAGCAAGTGTGCACCTGTTGTCGCTCCTGCGATGGGACCCGCTATGTC
CCTTCTGCCCAAACCTTTGCAGCATGTGGAGGCGTTGCAATGAATCTGAG
CCTCACGGCTAAGGCGAGCCGTGCAAAGGTCGGTGCACGGCGTGGGGGCA
AGATTACGTACACCGTCCGACTCAAGAACAGGCAGGCGTTTGAAAGTGGG
GTCGGCATGCGCATAGTCCTGCCCCCTCACATGACTTATGTCAGGAGCAA
ATCCAAGCCCCCGGTGTACAGCAATGTCTCGTTGTCGGCCGCAGGTATGG
GCAGGTTGTTGTTGCAGCAAGGTCAGAAATGGGGGGCCTCGGCTGCTGCT
AATGACACCCTCGTCGATTGGCCCGTGGTGCCCATGCCTGCTAAAAAGCG
ACGCAGGTTTATAGTCTACATGCGCGTGAAAGAGAGCGCACCGGTAGGGA
CATCGTTGGTGTTCACGAGCTATGTCTACCAAAGCACTCCCACGGGTATC
ACCTTTTGTGATAAATACGCCGAGGACTTGACGGTGTTAGTCAAAAAATA
AAAATTATACCCCGATCACGGGAAAAGGATTCGCCCACCGGGGAATGAAA
GTAACATGGTATCCTAACGTAAAGGAGTCGGGAGACATACATCAACGGGT
GGAAAGAGACAATTTCCAGAATATTTGTAGCATGAAGGTTGAGAACGCAA
GCGGTGCAACATAGAGAGAAAGAAATAGCGGGATAGCGGGGGAGCGAAGA
GAAGTAGGGAACAATGTTGAGTGAGACCTAAAATTGGGCAAAAAATCGAC
GTGAGTATGTTTCGATTGAAAGTCATACAGACGAAAAGTTAAGCACATCC
TCTTGACCTGATAGCGGACATGCTTATGCCATTGATCGCCTCACTTTGAA
GTTCAGAGGAATGCCTTCCATTGGAAGGTGGAGGAGGAGGCGGAGGCGGT
GGAAGCAGAGGAGGAGGAGGCGGAGGCGGAGGAGGCGGAGGAGGAGGAGG
AGGCGGAGGAGAACGAGGACGAGGCAGAGGAGGAGGTCATGAGCGGGCCA
TCCGAGGACTGTATTGGTGTGACACCTGTGAACAGTTCGTGTCCCGGGAC
GGCAATGGGGCACGTAACATCCTACGGGTGTACAGGAGTATGGTCCGTGG
GGAAGCTCGTCCCCATGATCTTCGCTTTGGTCAAGCGCGGCAAGATATGC
GGGCACTCTATGTGTAGCGTTCCCGCTGACCTCCTCTTTTATCCTCCTTC
CCCTTCTCCTCCTGGCCCTGTGTGGGCCGTCCGGGGACTTTGCCTTGTCA
AAAAACCTGTCAAAGTCGCTAGAAAAACTCGCACAAGGAAATAAGGGATG
AATATGCAACATTTTATTGTTGGAAGGCTCCTCCTCGTATGCAAGTCCTC
GAGGACGCAGGTTGCATGCGATAGTTCTAGAGGGATGTAGGAACAGAAAA
AAAGAGCTAAATGATGTAGGGTGGTATGGCTATGTGCCACTTCGGCGAGA
TCCAACCGCGCACTTGTTCATTAACTCAACCCCTCTCTCTAAAATATGCC
CTCAAGTACTCACAAGTCCCCCCTTCACACACACGTACATACGAAGGCAG
CAAATCCTACTATGGCAGTGCGCGTATCGGTCGTGGCCAGACGGCCCGGC
GAAACAAGTCTCGCTCCTCACAAGTAAGTCTCCTCTCTCTCTCCCTCCAT
GCCATCCCTTTCCTATCCCGTTGCCTCCTCTGTCTCCCTCACCAACATCT
CCCCACATCCCAAACACAAATCTGTAGAACATTCGACACCCTCGCACACA
TTGCCGAGGCCGTGGTGGCCGTGCCAGGGCAAGTGTTGATCGAAGCCGAT
CGGGACAAGGAAGGCGGGCTTGCCTTCATTCGCGGGCACGGCACTTACCA
AGAAGAGGATGACGTTGCACCAGCAGCAGCAATGGAGGAGGAGAGAGAGA
GAAGGGGAGGAAAGGTTCGACTTTGTGCGTGCAATGGCGGGATAATAGAG
CGGGTGAATAAGCTCGTGACAGTGCTCCCACCCAAGACACGGTATCAGGT
AGGGCGGGAGGGAGGAAGGGAGGAGGGATTAAGAGGGGAGAGAGATTCGA
GAGTAGAGAAGGAAAGGTAAATCAACTGACATACACAATTCTGTATGCAG
CAAATACGGTGAGGCGTTCGGAGACCGCGATCATGAAAATTCATTTTCTC
TCGACCACCTCCCACCCACCCACCCACCCTCCCTCCCTCCCTCTCTCCCT
CCTTCCAGGGCGCGATCGGTGACCTGGTGGTGGGCCGCATCACCGAGGTG
GGAGCCAAGCGCTGGAAGGTAGACTTAAGAGGGCACAAGGTGAGGGAGGG
AGGGAGGGAGGGTGGGAGGGAGGGCATAGAGGGGGTGGATGAGGTATTCG
ATCGGAGAGAGTGAATGGAGGGAGTGAAGGCTTACATACCACCTTGTCTT
GTCCTCTTTTCCTCCCTCTTTCTCTCCCTCCTCGTCAACAGGACGCCGTT
CTCCAGCTCTCCGCCGTCATCCTTCCCGACGGCCTGCAGCGCATCCGGGG
CCACGAGGACGTGCTCCAGATGCGACGGTTCTACCAAGAAAAGGACCTTA
TCAGCGCCGAGGTCCAAAACATCATGGTCAGCCCTGCCAGCCTCCCTCCT
TCCTCTCTCTCTCCGTCTTCACTACTCACCTCCCCCCTCCTCTCCCTCCC
TCCCTTTTTTTCTGTCTGCGCTCAACCCCTTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCAGAGCGACGGTACTGTTCACCTCCACAC
CCGGACCGTGCGCTACGGCAAACTGCAGAACGGCCTACTCGTCTACGTCC
GCCCCTCCCTCGTGCGGAGAAGCAAGCACCACTTCATCACGCTGCCTCGA
CAGGGGGTGGATGTCATCCTGGGTATGCCGATGCCTTCCCTCCCCCCCTC
CCCCCTTCCCTCCCTCCCTCCCTCCCTCCATTTACTAAGCTCTCCCTTCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCACCCATCCTGTCTC
CTTCTCAGGCGTCAATGGCTATGTCTGGGTGTCCCGTTCCCTTTCCCTTT
CCAGGGAGGGAGGGTTGGAGGGAGGGAGGGAGGAGGAGCTACAGACGGGA
AAAGCAGAGGCGAGTCCAGTATATCTCAGTCATCCTCTCGCCTACCCCTC
CCCCCCTCCCTCCCTCCCTCCTCCTCTGCCACCTTCTCCTTCTTCTTCTC
CTCACATAGAACTCTGTGCCTCATCCTTCGGGGACATTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCAGGTCCTCCTCGCCCTC
CAAGGCGCCCACGCTGCCCGTCCCACCACCAGTCAGGAGCGGCTGCAGAT
AGCCCGGGTCCGAAACGCTCTGCTGCTGCTGGATCAGGTGGGAGGGAGGA
AGGTTGTTCATTTAATTGACTTGGAATTCCTCATACGCCCTCCCTCCCTC
CCTTCCTTCCTCCCTCCCTCCCTCCCTCCAGGCCTTCCTCTCCATTTCCT
CCGAAACGATCGAGCGCGTATGCGCCGTGTCGGAGGCCCTTGCCCTCCCT
CCCGCACACCTTCTCTCCCCTACCGGCGCTCAGGCCGTGCTGGCAATCCT
CTTGAACGAGGACGAGGGCTGGGGGGAGAAAGGGGAAAAGGACAAGCGAT
TGAAGAGCTAG

Coding sequence (CDS) from alignment at chr27:475791..480951-

>NO27G01460.1 ID=NO27G01460.1|Name=NO27G01460.1|organism=Nannochloropsis oceanica|type=CDS|length=3147bp|location=Sequence derived from alignment at chr27:475791..480951- (Nannochloropsis oceanica)
ATGGCGCAGCTTGGACTGACTGGTCGAGCCGGGGCCATTCTGCTACTGGC
GATTGCCACCAGCAACCTCCACGGCATTGCGGAGGGGAAGACAGCGACGA
CAATTCTTGCTCACCCGGCAACAGCGGCGCGCGACGTGATCCTGACGGCC
GATGGTTCCAGCCCATCTCCTCACTCAAATTCAATCCTCGCCACTGAGCC
TGCCTCGGGCCTCTTCTACCTTGACAACATCGTGGACGAAGCTTCCATTA
CCATGCTCAAAACCCGTTTCAATCTGACAATGCAAACGGCTTCGGTGGAT
GGCCGTAGAATGATGGACGTGCCAATTGGGGTTGTGGCCAGGCTCGGGAC
AGCGCTACAGTATCGTCGCCTTGATTCAGTGATATTGCATGGTAATGATG
CCAGTGACGACAACGACAAGTATTTCAAGCACGGCCAAGCGCGATTTCAG
CTGCCTATCCAGGAGCACAAAAACGGGTTTGGGAACCACAAGGATCACTA
TTACCAGACCACTCTGCATGAAAAGCACGTGGTAGTAGAAGGCCAAGTGG
GAATTCTCTACTTGGATGGCGACGGTCAAATGATTTTTACGAACGACGAG
ACCAAAGCGGAGACCTCCATTGGCATTGTTGCAGGGCGCTTTATCGCCTG
GAATAACGCAGCCTTTACTCATCGCGTGGTGCACGGGCCGTTCAATATCA
TGCGGCGTATGATGGGACCTATGACATGGAATAATGTGGCTCAGGAGGAG
ACGCCCAAAGATGGTATTGCTCAGATCTATGGTGGCTTGTTGAGTGTGTG
TGGCGGAACTTCCCCTGCTCAATGTACAAACCTGACTGATTACCGGTGCG
ATGGAAATACCTATGTAAGCACCAGCGGAGGAAACACCAGCTGGTTTGAC
TGCGCGAGTTTTTGTGACGATAATATCGGCACCACTTTAGGGTATGGTCA
ATTTGACAGCACCAATAGCGTATGCTACTGTGGAGGCAATACTTCGTGCC
CTCTTTTCACACCTGATCCTGGCTTCATCCAATTCATGTACAATAGCGGT
GACGAAGACTGTCCAACTTTGACAGTGTCGCCCACACAACAGCCTTCTAC
ACAGCCCTCCAACAGCCCCTCTGGCGCTACTGGCGCTCCCACCTCCTATC
CTACCTTTGCCCCGCCGCCGCCCGACGCACCTGTCGAGATCCTGGGGCAA
GGATTCGTGTGCGGGCCAGAGGTCACCCTTGTCAGTAGACGTCATGCCAT
GGCAGCATCAGGGGCCGATATGGAGAGGACGGAGCGAGAGAAGCAGGCAG
GAGAGGAGTTCTTATCGGAAATTGGCCGGGACTATCATCAGCAACAGGGC
GCCTTGGACGCTGCATGGACACCGGAGACCTGTTTTGCTGCCTGCGCTCA
GCGATTGGGTAATCCTCCTTCCTTCGTGATCAATATCTACAATGACGGCG
GACAGCAAGTGTGCACCTGTTGTCGCTCCTGCGATGGGACCCGCTATGTC
CCTTCTGCCCAAACCTTTGCAGCATGTGGAGGCGTTGCAATGAATCTGAG
CCTCACGGCTAAGGCGAGCCGTGCAAAGGTCGGTGCACGGCGTGGGGGCA
AGATTACGTACACCGTCCGACTCAAGAACAGGCAGGCGTTTGAAAGTGGG
GTCGGCATGCGCATAGTCCTGCCCCCTCACATGACTTATGTCAGGAGCAA
ATCCAAGCCCCCGGTGTACAGCAATGTCTCGTTGTCGGCCGCAGGTATGG
GCAGGTTGTTGTTGCAGCAAGGTCAGAAATGGGGGGCCTCGGCTGCTGCT
AATGACACCCTCGTCGATTGGCCCGTGGTGCCCATGCCTGCTAAAAAGCG
ACGCAGGTTTATAGTCTACATGCGCGTGAAAGAGAGCGCACCGAGGAATG
CCTTCCATTGGAAGGTGGAGGAGGAGGCGGAGGCGGTGGAAGCAGAGGAG
GAGGAGGCGGAGGCGGAGGAGGCGGAGGAGGAGGAGGAGGCGGAGGAGAA
CGAGGACGAGGCAGAGGAGGAGGTCATGAGCGGGCCATCCGAGGACTGTA
TTGGTGTGACACCTGTGAACAGTTCGTGTCCCGGGACGGCAATGGGGCAC
GTAACATCCTACGGGTGTACAGGAGTATGAACATTCGACACCCTCGCACA
CATTGCCGAGGCCGTGGTGGCCGTGCCAGGGCAAGTGTTGATCGAAGCCG
ATCGGGACAAGGAAGGCGGGCTTGCCTTCATTCGCGGGCACGGCACTTAC
CAAGAAGAGGATGACGTTGCACCAGCAGCAGCAATGGAGGAGGAGAGAGA
GAGAAGGGGAGGAAAGGTTCGACTTTGTGCGTGCAATGGCGGGATAATAG
AGCGGGTGAATAAGCTCGTGACAGTGCTCCCACCCAAGACACGGTATCAG
GGCGCGATCGGTGACCTGGTGGTGGGCCGCATCACCGAGGTGGGAGCCAA
GCGCTGGAAGGTAGACTTAAGAGGGCACAAGGACGCCGTTCTCCAGCTCT
CCGCCGTCATCCTTCCCGACGGCCTGCAGCGCATCCGGGGCCACGAGGAC
GTGCTCCAGATGCGACGGTTCTACCAAGAAAAGGACCTTATCAGCGCCGA
GGTCCAAAACATCATGAGCGACGGTACTGTTCACCTCCACACCCGGACCG
TGCGCTACGGCAAACTGCAGAACGGCCTACTCGTCTACGTCCGCCCCTCC
CTCGTGCGGAGAAGCAAGCACCACTTCATCACGCTGCCTCGACAGGGGGT
GGATGTCATCCTGGGCGTCAATGGCTATGTCTGGGTGTCCCGTTCCCTTT
CCCTTTCCAGGGAGGGAGGGTTGGAGGGAGGGAGGGAGGAGGAGCTACAG
ACGGGAAAAGCAGAGGTCCTCCTCGCCCTCCAAGGCGCCCACGCTGCCCG
TCCCACCACCAGTCAGGAGCGGCTGCAGATAGCCCGGGTCCGAAACGCTC
TGCTGCTGCTGGATCAGGCCTTCCTCTCCATTTCCTCCGAAACGATCGAG
CGCGTATGCGCCGTGTCGGAGGCCCTTGCCCTCCCTCCCGCACACCTTCT
CTCCCCTACCGGCGCTCAGGCCGTGCTGGCAATCCTCTTGAACGAGGACG
AGGGCTGGGGGGAGAAAGGGGAAAAGGACAAGCGATTGAAGAGCTAG

Synonyms

Publications