NO24G00300.1, NO24G00300.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO24G00300.1
Unique NameNO24G00300.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1437
Alignment locationchr24:100018..102601 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr24genomechr24:100018..102601 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO24G00300.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO24G00300NO24G00300Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO24G00300.1NO24G00300.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO24G00300.1.cds1NO24G00300.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO24G00300.1.cds2NO24G00300.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO24G00300.1.cds3NO24G00300.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO24G00300.1.cds4NO24G00300.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO24G00300.1 ID=NO24G00300.1|Name=NO24G00300.1|organism=Nannochloropsis oceanica|type=mRNA|length=1437bp
ATGAAAGCTATTCGGAAGAAATATGTGGGGAGAAGGCCCAGCGCTGTCGC
CTCGCCAAGGCCGCGTGTTATCCGTAGCGCTAGCAGCAGCAGCGCTAGCA
GTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTACCGCCATCACC
ACTACCAGCACCAGCAGTACCCTCCCTCCTTCCATCCCGTCCTCCTCCCC
CTCCTCCTCCCCTCCTCATCCACCTCATTCCCTCCTCACGGGCATCCCAA
GCTTGTCGACCCGGTCATGGCCACCGGCATTGACGAGGACGAGGAAGGAG
ACTTCGACCACGGCTTCCTTCAATGGGGCCCTCACCAGCAGCAGTGCAAG
TACAAGTACCACCTCCCCCCTCCCTCCTCCTCTATACCAGCCACAGACCT
TTGCCCTGGCCGTGGCTGTCGCACTCATCCGCCTCCGCGAGAAGGCAGCC
CTACGCCGTAAACGAAAGCTTCCATCCCCTCTCCTCCCCACCCGCCCTTC
CACCCTCCCTCCTCCTCCACCAGTGCGAGGAGGAGGTGCTTTGCTCATGT
CACTCCCGGACGAGCTAGAGGGATGCCTGCGAACGCGAGAACTAGCCTCG
GCCTTGGAAAACGTTTGCTTCCTGCTACCTTCTAAGGATGGGAGGATGAG
CGAGGGAGGCATGGAGGGTGAGGAGGCGGGAAGGAGAAACAAGGAAGGGG
GCCAAGAAAAGGGAATGGAAGGATATGCGTACCTGAAGGCGTGCCTTGTA
CACGCTCAGACAGGAGAAAGACATGGAGGAGAAGGAGAAAGAAGAGAAGG
AGGGGGAGGAGGAGGAAGAGGAGGAGGAGGAAGAAGGAGTGCGGGAAGAC
AGGAAGGAGGGTGGGAAGGAAGCAAGCCCTGCTCTCCCCTCCAGGCTGTA
ACGCTAGGTCTCTTCAGCTATTTTCTTCTTCCTTCTCAAAAAGAGGCGGG
GAGGGAAAAAGGGAAGGAGGACTTGCTCCAGCATCCCTCCCCACATCTTC
TCCTACGAGCCGTTGCCCTGTACCATAGCCTGCTCCAAGAATCTCTCCCT
CCCTCCCTCTCTCTCTCCCTCCCTCATTCCCTCCCCCTTGACCTCCACGC
TATCGAGGCAGGCCTAGCCCACTCCCTGATCCGCTTTGGTCGACACGTCC
TCCTGCTAACCCCTCCCTCCCTCCCTCCATCCATCCCTCCCTCTCTCCTC
GAAGCCCTTCCCTCCCTCTTGGACCTGTATGAGACCATAATACTGTCCCG
CGTGCGTCTGTGGACGGGGGAGGGAGGGGGAGAGGGAGGGATGGAGGGTG
TGATTGAGAGACTGGTCCGAGTGGCACTGGCGCTCAGGCCGCTTCGACTC
GCGGAGGCCTACGTGTGGACGAGCGTCGGGAGGGTGAAAGCGGAGGTGGT
GAGGAAGGGAGGGAGGGAGGGGGGGAGGACATGCTAG
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protein sequence of NO24G00300.1

>NO24G00300.1-protein ID=NO24G00300.1-protein|Name=NO24G00300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=479bp
MKAIRKKYVGRRPSAVASPRPRVIRSASSSSASSSSSSSSSSSSSSTAIT
TTSTSSTLPPSIPSSSPSSSPPHPPHSLLTGIPSLSTRSWPPALTRTRKE
TSTTASFNGALTSSSASTSTTSPLPPPLYQPQTFALAVAVALIRLREKAA
LRRKRKLPSPLLPTRPSTLPPPPPVRGGGALLMSLPDELEGCLRTRELAS
ALENVCFLLPSKDGRMSEGGMEGEEAGRRNKEGGQEKGMEGYAYLKACLV
HAQTGERHGGEGERREGGGGGGRGGGGRRSAGRQEGGWEGSKPCSPLQAV
TLGLFSYFLLPSQKEAGREKGKEDLLQHPSPHLLLRAVALYHSLLQESLP
PSLSLSLPHSLPLDLHAIEAGLAHSLIRFGRHVLLLTPPSLPPSIPPSLL
EALPSLLDLYETIILSRVRLWTGEGGGEGGMEGVIERLVRVALALRPLRL
AEAYVWTSVGRVKAEVVRKGGREGGRTC*
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mRNA from alignment at chr24:100018..102601-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO24G00300.1 ID=NO24G00300.1|Name=NO24G00300.1|organism=Nannochloropsis oceanica|type=mRNA|length=2584bp|location=Sequence derived from alignment at chr24:100018..102601- (Nannochloropsis oceanica)
ATGAAAGCTATTCGGAAGAAATATGTGGGGAGAAGGCCCAGCGCTGTCGC
CTCGCCAAGGTAAGGAAGGAAGGGGGGAGGAAAGGGGGAGGAAGGGAGGG
TAGGAAGGAAGGAGGATAGGAAGGAGGGAAGGAGGAAGAGAGGGAAGAGG
TGTATGTCAACTTTCCTCCCTCCCTTCCTCCTCCCTTACCCCCGGATAGG
CCGCGTGTTATCCGTAGCGCTAGCAGCAGCAGCGCTAGCAGTAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGTACCGCCATCACCACTACCAGCA
CCAGCAGTACCCTCCCTCCTTCCATCCCGTCCTCCTCCCCCTCCTCCTCC
CCTCCTCATCCACCTCATTCCCTCCTCACGGTGCGTGCACTCAAGGAAGA
ACATCGGCTCAGGCCCGACGGCTGCTTCGAGGGAGCGAGGGAATGTCATA
CACTCATCTAGTCTGCTCATACTTTACAGGGCATCCCAAGCTTGTCGACC
CGGTCATGGCCACCGGCATTGACGAGGACGAGGAAGGAGACTTCGACCAC
GGCTTCCTTCAATGGGGCCCTGTCTGCTCCTCCCTCCCTCCCCTTCTCCC
TCCCCCGCCCTCCGACTCGACCACGCAGTCATTTTCTTCATCGTCACTTC
TCTCGTCCGCTTCTTCTTCTCCGAGCAAGAAGCAGCGGATCACCTATTTT
CCCTCCCCCCCCCCTCCTCCTCCTCCTTCTCCTCCACGGGGGCAGAGGGG
AGGGAGGTATAAACATGGCATGGATGACATGTGCATGAGGAAGCCCGAAG
GGAGTGAAAACTGGAAGAGTGAGTGTATGAGGATTTGGATATATATATGA
GTGTTGTGGAGGGGTTGACGTGAGTCAGAAATCACAAAAAAATGCACCGA
ATTAGAGAGGGCTCCATGAAGAAAGTAGTGGCATGTTTTGATGTTGTGAG
GTTTGGTAGAAGAAATGCAAGAAACGAATTAAAATTAACGATAAAAGTGT
GTGGACACTTCCAGCCAGCTTTTCCCCTTATCTCTGCGTTGCCCCACACC
ATGGACGGTAGCAAGCAAAGGGAAACAGAGAAAGCGTCTTCCCAAATACC
CCTTTTCCATTTGTTTTTGTCGTTGTGCCTCCAAGTAAAGTAGAGCAGGG
CTGCGCACAATGCAAGGGACAATGTGTTATCATCTCAGGAACGTATATTT
TGACGAACACGAGGTGTCCTCACGAGGTGTCCAGCCGTCGCGGCCCATGC
TCTGTAAAGGGTTATTATCATATGGTAATGAAGGCAATCATTGCTTGCTG
TTGGGCTTGTGGTCTCAGTTGTAGAATGAAAGGAGTTCCAAAGTTATGTC
GAGTGTTGCTTGACGTTTCGGCCCGCTCCTGCGCATGTCTCAACATCGTC
CTCCTCTTCTCTTCCCTCCTCCTCACCCCTCCTGTCCATACATACAGGCA
CATGCCTCTACCACCGCCCTCGTCCCAAGCACCAGCAGCAGTGCAAGTAC
AAGTACCACCTCCCCCCTCCCTCCTCCTCTATACCAGCCACAGACCTTTG
CCCTGGCCGTGGCTGTCGCACTCATCCGCCTCCGCGAGAAGGCAGCCCTA
CGCCGTAAACGAAAGCTTCCATCCCCTCTCCTCCCCACCCGCCCTTCCAC
CCTCCCTCCTCCTCCACCAGTGCGAGGAGGAGGTGCTTTGCTCATGTCAC
TCCCGGACGAGCTAGAGGGATGCCTGCGAACGCGAGAACTAGCCTCGGCC
TTGGAAAACGTTTGCTTCCTGCTACCTTCTAAGGATGGGAGGATGAGCGA
GGGAGGCATGGAGGGTGAGGAGGCGGGAAGGAGAAACAAGGAAGGGGGCC
AAGAAAAGGGAATGGAAGGATATGCGTACCTGAAGGCGTGCCTTGTACAC
GCTCAGACAGGAGAAAGACATGGAGGAGAAGGAGAAAGAAGAGAAGGAGG
GGGAGGAGGAGGAAGAGGAGGAGGAGGAAGAAGGAGTGCGGGAAGACAGG
AAGGAGGGTGGGAAGGAAGCAAGCCCTGCTCTCCCCTCCAGGCTGTAACG
CTAGGTCTCTTCAGCTATTTTCTTCTTCCTTCTCAAAAAGAGGCGGGGAG
GGAAAAAGGGAAGGAGGACTTGCTCCAGCATCCCTCCCCACATCTTCTCC
TACGAGCCGTTGCCCTGTACCATAGCCTGCTCCAAGAATCTCTCCCTCCC
TCCCTCTCTCTCTCCCTCCCTCATTCCCTCCCCCTTGACCTCCACGCTAT
CGAGGCAGGCCTAGCCCACTCCCTGATCCGCTTTGGTCGACACGTCCTCC
TGCTAACCCCTCCCTCCCTCCCTCCATCCATCCCTCCCTCTCTCCTCGAA
GCCCTTCCCTCCCTCTTGGACCTGTATGAGACCATAATACTGTCCCGCGT
GCGTCTGTGGACGGGGGAGGGAGGGGGAGAGGGAGGGATGGAGGGTGTGA
TTGAGAGACTGGTCCGAGTGGCACTGGCGCTCAGGCCGCTTCGACTCGCG
GAGGCCTACGTGTGGACGAGCGTCGGGAGGGTGAAAGCGGAGGTGGTGAG
GAAGGGAGGGAGGGAGGGGGGGAGGACATGCTAG
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Coding sequence (CDS) from alignment at chr24:100018..102601-

>NO24G00300.1 ID=NO24G00300.1|Name=NO24G00300.1|organism=Nannochloropsis oceanica|type=CDS|length=1437bp|location=Sequence derived from alignment at chr24:100018..102601- (Nannochloropsis oceanica)
ATGAAAGCTATTCGGAAGAAATATGTGGGGAGAAGGCCCAGCGCTGTCGC
CTCGCCAAGGCCGCGTGTTATCCGTAGCGCTAGCAGCAGCAGCGCTAGCA
GTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTACCGCCATCACC
ACTACCAGCACCAGCAGTACCCTCCCTCCTTCCATCCCGTCCTCCTCCCC
CTCCTCCTCCCCTCCTCATCCACCTCATTCCCTCCTCACGGGCATCCCAA
GCTTGTCGACCCGGTCATGGCCACCGGCATTGACGAGGACGAGGAAGGAG
ACTTCGACCACGGCTTCCTTCAATGGGGCCCTCACCAGCAGCAGTGCAAG
TACAAGTACCACCTCCCCCCTCCCTCCTCCTCTATACCAGCCACAGACCT
TTGCCCTGGCCGTGGCTGTCGCACTCATCCGCCTCCGCGAGAAGGCAGCC
CTACGCCGTAAACGAAAGCTTCCATCCCCTCTCCTCCCCACCCGCCCTTC
CACCCTCCCTCCTCCTCCACCAGTGCGAGGAGGAGGTGCTTTGCTCATGT
CACTCCCGGACGAGCTAGAGGGATGCCTGCGAACGCGAGAACTAGCCTCG
GCCTTGGAAAACGTTTGCTTCCTGCTACCTTCTAAGGATGGGAGGATGAG
CGAGGGAGGCATGGAGGGTGAGGAGGCGGGAAGGAGAAACAAGGAAGGGG
GCCAAGAAAAGGGAATGGAAGGATATGCGTACCTGAAGGCGTGCCTTGTA
CACGCTCAGACAGGAGAAAGACATGGAGGAGAAGGAGAAAGAAGAGAAGG
AGGGGGAGGAGGAGGAAGAGGAGGAGGAGGAAGAAGGAGTGCGGGAAGAC
AGGAAGGAGGGTGGGAAGGAAGCAAGCCCTGCTCTCCCCTCCAGGCTGTA
ACGCTAGGTCTCTTCAGCTATTTTCTTCTTCCTTCTCAAAAAGAGGCGGG
GAGGGAAAAAGGGAAGGAGGACTTGCTCCAGCATCCCTCCCCACATCTTC
TCCTACGAGCCGTTGCCCTGTACCATAGCCTGCTCCAAGAATCTCTCCCT
CCCTCCCTCTCTCTCTCCCTCCCTCATTCCCTCCCCCTTGACCTCCACGC
TATCGAGGCAGGCCTAGCCCACTCCCTGATCCGCTTTGGTCGACACGTCC
TCCTGCTAACCCCTCCCTCCCTCCCTCCATCCATCCCTCCCTCTCTCCTC
GAAGCCCTTCCCTCCCTCTTGGACCTGTATGAGACCATAATACTGTCCCG
CGTGCGTCTGTGGACGGGGGAGGGAGGGGGAGAGGGAGGGATGGAGGGTG
TGATTGAGAGACTGGTCCGAGTGGCACTGGCGCTCAGGCCGCTTCGACTC
GCGGAGGCCTACGTGTGGACGAGCGTCGGGAGGGTGAAAGCGGAGGTGGT
GAGGAAGGGAGGGAGGGAGGGGGGGAGGACATGCTAG
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Synonyms
Publications