NO23G01610.1, NO23G01610.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO23G01610.1
Unique NameNO23G01610.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4538
Alignment locationchr23:595742..600279 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr23genomechr23:595742..600279 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO23G01610.1 vs.
Match: XP_004988343.1 (hypothetical protein PTSG_10292 [Salpingoeca rosetta]; EGD80018.1 hypothetical protein PTSG_10292 [Salpingoeca rosetta])

HSP 1 Score: 71.6 bits (174), Expect = 2.100e-8
Identity = 43/117 (36.75%), Postives = 59/117 (50.43%), Query Frame = 0
Query: 1218 LLSAVCGHMPSWALDDLILTLVGFLSAFPPPPSSSLPYHPSSSSSSITMQWMAWAIALPYFPRAHVSAQARSLFINQIEECMRKKDVKKFKAAVKAFCGGKKKGTAGMPPSRGRKGG 1335
            LL AVCG +PSWALDD++  +   +                  S+ +T Q +  A+  P F R  VS +A+ +F+   +      D K+ K AVK FCGGKKK T+G P   G  GG
Sbjct:  983 LLLAVCGGLPSWALDDIMQAIRTIMECL---------------SADVTSQLLYGAMCQPTFARPDVSDKAKLIFLEDFQRLGATSDWKRLKNAVKKFCGGKKKNTSGTPAIGGGSGG 1084          
The following BLAST results are available for this feature:
BLAST of NO23G01610.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
XP_004988343.12.100e-836.75hypothetical protein PTSG_10292 [Salpingoeca roset... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO23G01610NO23G01610Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO23G01610.1NO23G01610.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO23G01610.1.cds1NO23G01610.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO23G01610.1 ID=NO23G01610.1|Name=NO23G01610.1|organism=Nannochloropsis oceanica|type=mRNA|length=4538bp
GTGGAAGATGACCACGCCATTTTTGCTGTGCATGCGCAATTCCCCCTCCT
TCCCCTCCACCTTTTTCTTGTCATCCTCCCCCAGGGCAGCCTCCCTCCGC
TGTACATGTTCGCAACCGCATTAAGTGCCTGCCGTCGCTCGCCACGTAAG
GCGGAGACTGCTCTTATCATCACATGTCGCCAGCGACGCCCCACCACATC
GAACCTGATTCCCTGATTCTCCCCCATCCTTTTTCATGGTCCATCCCACA
CTACAGTACGACCGAAATGTATACATCACTCGCACACACACAGGTGAAAT
ATCATGATGATACCACTCATTCTACATCGGCAACGTTCGTCTTCCAGACC
CTGACCTCCCCGCGAAATGGCAACCTCACCACCAGTGCCGCACACTCTCC
TTGAGCTCCTCCAGCAGCTCGAAGGCCACTTACACGCGCTCTTGTCGCCC
CAGCCAGCGGTAAATAAGGGAAATGGTGACAGCCATGATAAGTGGCTGCA
ACACTTCCAATTGGCTCCTGAGGCATGGGCCGTATGCGTGGAGGGCTTCC
GTCTCACCCTCGCAAGCCATCAGCACCAGTCTCTGCAAGAGCAGCAGCAG
CTGCACCACCAACACCATCACCACCACCGTCTTTCGCTTTTTCTCGCACA
GACCCTTGTCCTGAAAGCCCGCCGATCTTGGCGAGATGGTGGGTTGGCTG
ACCACCAAATACAGGAGCTTGCAGCATTACCTTTCCAAATCCTCGCCCTT
CAGCCTTCCCTACCTCAGCATTACGACCTCATCGTTACCCAACTATGCCT
CGGGCTTTGTGCCGCTGCCTTGACATGTCCACGCATCACACCCGAAAGTC
TTTTTGCTCACCTCATGGCATTGGCCTCTGAGGCAGGAAAAGGGGAAAAG
GAAGAGGAGGGGAGCGATACTGTGTGTATGCTCCGTCTAAAAGTCCTTGA
ACTTTTGCCTGAAGAGGCCCAAAGACGACGCACCCTCTCCCTTCCCGCTG
AACGGCGATCTGCCATCCTTCATAACCTGTGCCACGGAGGACTTGAGGGC
CCTGCTGGGTACGCCCTTGCATATCTCCTTTCCTCCTCCACCTCCTCCAC
CTCTTCCTCCTCCTCCTCCTCTTCCTTCCAGCCCTCGTCCTCGTGGTCCC
TTCCTCACTCCTCCCTCCGTGCGGTAGGGGCATGGTTGGAACTGAAAACT
GTGTCGTGGAACGATATTTTGAAGCCATTGGTGGTCCCGCACCTCACGGA
AATAGTGCTGAGGGAATGTCAGGGACGGAGGGAGGGAGGGAAGGAGGGAG
GGCTGGGAGCATCGGCACTGGATCTTTTGACTATCATTGTGACGGCAGCA
CCACCTGAAGGACCACCGTCCCTCTTGAAGGAGGAGGAGCAGCAGCAGTG
CCTGCGGCCGGGGCAGCAGAGCGTGGAGGTAGGCATGATGCTGCTGCCGT
TGCTTCGGAGTGTTTGGGTGTCGGTGGAGGGGGAAGGGCTGCCTGCCCTT
GAGTCTTCGGTTGGTCGGGCTTTCCTGGGACTGGTGGTAGCAGTGGGAAA
GGCAGGGCTATTGGAGATGGAGGATGGAGAGGACGAGGACGACGGGGAGG
GAGGGGAGCGGGAGACGCGAAAGTGGGGCGGTGGGGAAGGGAGGAGGCGG
AGAGGAGGAGGAGGAGGAAGGGGGGGAGCGACCGCAGCAGCTTGGCCATT
TCCACACGCTGCTGGTGGAGAAGAGGTTCTTCCTCTTCAGAGAGATCCCA
TGGCAATCCTGACCCCCCTCCTCCTCACCCTTGAACACGCGCCTCTGGAG
CTGGTTTTGCTGACCTTCGAGTTTTGGAATCACCTCGGCTGCAGCAGTTG
TACGACGAGCAGCAGCAGCAGCAGCGGCAGCAGCAACAGTGTCGGCAGTA
ACGACACGCCCTCTCCACCTTTGGCTTCTACCACAAGAGAAGACCAAACA
CTTTCCGCCCCTGCCTCCCTCCTCCTCATCCAGCACCATGCCCTCCGTCA
AGCCCTCCCTCGGCTCCTCCACCGCACTGCCTTCCCCCCCTCCTATCCCT
CATTCTCCTTGACTGCCCGTGAAGCCCTCCTAGAATTTCGAGAGGAGGCG
CGAGACGTCCTGCGTGCCTGGGTTCTGGTCCCCTCCTCCATCCCGCCCTC
CCCCCCTTCCTCCTTCACCCTCACCCTGCTGGCCCACGAGACGGTGACGC
ACCTCGAGCAGCTGGCAGAGGAGAGCTACTACAATCACCAGCACCAGCAG
CAGCAGCAGGGGGAAGCATCCGTCTTTCCCTCCTTCCCTCCACCATGGGC
CACTGCCGAGTCCCTCCTCCACGCGCTCACTGCCACTCCGAACACCCACC
CCCTCCCTCTTCTCCTCCCTCCCCCTCTCTTGCCCCGCCTCCTCCTCGCC
CTAGATTCTCTCCCCTCCCATCCTGCCCTCCTCCGCGCTGCCGTCTTCCT
TCTCTCCTCCTTCGCCGACTTCCTGGCCGCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCCTCCCTCGCTCTCGACCTCTGCCTCCGCTCCTTCTCCTTC
TCTCAGGCTTCCACCGAGACCTTTCCTTTCCTCTCAAAACAAGACCATGC
TGGGGCTGTTGCACTCCTCAAGCTCACCTCCCTCCCTCCCTCCCTCCATC
CCTTCCTCCCCTCTCCCGCCGATCGCCTCACCCTTGCGTATTTCTCCCTG
AGACGCCAAGAGGAAGGAGGAAGGGAGGGAGGGAGGGAGGGCTGCCCCCT
CACTCCTGCGAGCATAGCCTTAGTGTTGGAGGCTACGGCGAAAGTAGTGC
TCGCGACAAGAGACCCGGATAAGCTCGAAGCGCTCGTCGGGCCGATGTGG
GCACGGATTGGAGAAGAATTGTGTGGAAGGGAGGGAGGGAAGGAGGGAGG
GAGGGAGGGGGATGTGGTGACGCTGGAGTTGGAGGCGATAGAGGTGGTAG
TGCGGGCGGCTCGAACACTGATAGTGCAGGGCCAGAAGGCCAAGGCGCCT
CCGCCGCCGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAGCAACAACA
GGTGGGGGTATCTCCTCCCTCCCTCCCTCTCCTTCCATCTATCGCCTCCG
TAGTCGCAGAGAGCTTCGTCGCCCGCGGGGAAGGGTTGACAGCGTTGCTT
GGGCTCCAGAGTATCAACTCTCCCTCCCTCCCTCCTTCCTCCCTCTCTTC
CCTTTGCCGTAGAAATAAGGGAAATGGGTGGTCGACCGCCTCACTACAGC
TTACCACTGCGCTCTTCCGTCTCTTGCAAGTCGAGCTTGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGGAGGGTTTCCAACAGGGACAACCTCCGACG
CATCTTCTTCCAATGTTTCTCCGCTTGGGCACCTCTGCTCCTCACCTCCA
CCACCACCAGCATCTCCCCACCTCCATCTTCCTCCTTCTCCTCCTCCCCC
ACTCCCTCCTTCGTCCTCCTTCCTGTCCAGCTGTCTTGGGCGGAGGCTGC
GCTTGCCGTTGGTCTCACTTTGGGTACAGATTCAATCAACGCTCCTTGGG
AAGTCTACCGCACTCTCTCCCAACGCGCTGCCCATCTCCTCCTCCAGATA
GCTCCTCCCTCCCTCATTCCTTCCTTCTTACATGTACAAAGGGAGGACCT
AGCTGCCGCGTTCTTTTCTTCATGGACTCGCGTCCTCCTCCTTTTCTTCC
CTTCTTCCTCTTTCTCATCCTCGTCCTCCTCCTCTTCCCTGAATGCCATC
ACAAGCAGCAATGGCAGAAACACCCTCTCATGTTCCTCCTCCCTTCTTTC
TCCATTTTTCCCTCTCATTCTCGCCACCGCTGCCTCGTGTCTAAACCTGC
AAGAACGCACCGGCGCCCGAGCCGTCCTCCTCTTCGTCCGCAAGGCCTTC
CTCTTCCTCCCTTCGGCCTTTTTCCTTCCTCTTCCCATCATCACCCATCA
AAAGGAAAGAATAGAGAGAGGGGAGGATGGACCTCAACAATGCCTTGGCC
AGTCCCTCATTTTCGCTCTCCTTTCAGCAGTCTGTGGACACATGCCTTCC
TGGGCGCTGGATGACCTCATCCTCACCCTTGTTGGATTCCTTTCCGCCTT
CCCTCCACCTCCTTCTTCTTCACTTCCTTACCATCCCTCCTCCTCTTCCT
CATCTATCACCATGCAGTGGATGGCATGGGCTATCGCTCTCCCGTATTTC
CCGCGGGCTCATGTCAGTGCCCAAGCGCGAAGTCTTTTCATCAACCAAAT
CGAGGAATGCATGAGGAAAAAGGACGTTAAAAAGTTCAAAGCGGCTGTGA
AGGCCTTTTGTGGGGGCAAGAAAAAGGGGACGGCAGGCATGCCGCCCTCT
AGGGGAAGGAAGGGAGGAAGGGAGAAAGAGGACCCGAAAGAAGAGGAACA
GATTGACATGAGAATATGAATGAAAATTGTGACAGCTTTTATGTAAAGTA
TGGTAATCTTTGACTGTGTAGAAACAGGGATAGAGTACTCACAGAACATT
ATCGCAATAGTAAGACAAAAAGAAAAATAACAATAGTG
back to top

protein sequence of NO23G01610.1

>NO23G01610.1-protein ID=NO23G01610.1-protein|Name=NO23G01610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1351bp
MATSPPVPHTLLELLQQLEGHLHALLSPQPAVNKGNGDSHDKWLQHFQLA
PEAWAVCVEGFRLTLASHQHQSLQEQQQLHHQHHHHHRLSLFLAQTLVLK
ARRSWRDGGLADHQIQELAALPFQILALQPSLPQHYDLIVTQLCLGLCAA
ALTCPRITPESLFAHLMALASEAGKGEKEEEGSDTVCMLRLKVLELLPEE
AQRRRTLSLPAERRSAILHNLCHGGLEGPAGYALAYLLSSSTSSTSSSSS
SSSFQPSSSWSLPHSSLRAVGAWLELKTVSWNDILKPLVVPHLTEIVLRE
CQGRREGGKEGGLGASALDLLTIIVTAAPPEGPPSLLKEEEQQQCLRPGQ
QSVEVGMMLLPLLRSVWVSVEGEGLPALESSVGRAFLGLVVAVGKAGLLE
MEDGEDEDDGEGGERETRKWGGGEGRRRRGGGGGRGGATAAAWPFPHAAG
GEEVLPLQRDPMAILTPLLLTLEHAPLELVLLTFEFWNHLGCSSCTTSSS
SSSGSSNSVGSNDTPSPPLASTTREDQTLSAPASLLLIQHHALRQALPRL
LHRTAFPPSYPSFSLTAREALLEFREEARDVLRAWVLVPSSIPPSPPSSF
TLTLLAHETVTHLEQLAEESYYNHQHQQQQQGEASVFPSFPPPWATAESL
LHALTATPNTHPLPLLLPPPLLPRLLLALDSLPSHPALLRAAVFLLSSFA
DFLAALPPSLPPSLPSLALDLCLRSFSFSQASTETFPFLSKQDHAGAVAL
LKLTSLPPSLHPFLPSPADRLTLAYFSLRRQEEGGREGGREGCPLTPASI
ALVLEATAKVVLATRDPDKLEALVGPMWARIGEELCGREGGKEGGREGDV
VTLELEAIEVVVRAARTLIVQGQKAKAPPPPQQQQQQQQQQQQQQVGVSP
PSLPLLPSIASVVAESFVARGEGLTALLGLQSINSPSLPPSSLSSLCRRN
KGNGWSTASLQLTTALFRLLQVELEGGREGGREGGRVSNRDNLRRIFFQC
FSAWAPLLLTSTTTSISPPPSSSFSSSPTPSFVLLPVQLSWAEAALAVGL
TLGTDSINAPWEVYRTLSQRAAHLLLQIAPPSLIPSFLHVQREDLAAAFF
SSWTRVLLLFFPSSSFSSSSSSSSLNAITSSNGRNTLSCSSSLLSPFFPL
ILATAASCLNLQERTGARAVLLFVRKAFLFLPSAFFLPLPIITHQKERIE
RGEDGPQQCLGQSLIFALLSAVCGHMPSWALDDLILTLVGFLSAFPPPPS
SSLPYHPSSSSSSITMQWMAWAIALPYFPRAHVSAQARSLFINQIEECMR
KKDVKKFKAAVKAFCGGKKKGTAGMPPSRGRKGGREKEDPKEEEQIDMRI
*
back to top

mRNA from alignment at chr23:595742..600279+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO23G01610.1 ID=NO23G01610.1|Name=NO23G01610.1|organism=Nannochloropsis oceanica|type=mRNA|length=4538bp|location=Sequence derived from alignment at chr23:595742..600279+ (Nannochloropsis oceanica)
GTGGAAGATGACCACGCCATTTTTGCTGTGCATGCGCAATTCCCCCTCCT TCCCCTCCACCTTTTTCTTGTCATCCTCCCCCAGGGCAGCCTCCCTCCGC TGTACATGTTCGCAACCGCATTAAGTGCCTGCCGTCGCTCGCCACGTAAG GCGGAGACTGCTCTTATCATCACATGTCGCCAGCGACGCCCCACCACATC GAACCTGATTCCCTGATTCTCCCCCATCCTTTTTCATGGTCCATCCCACA CTACAGTACGACCGAAATGTATACATCACTCGCACACACACAGGTGAAAT ATCATGATGATACCACTCATTCTACATCGGCAACGTTCGTCTTCCAGACC CTGACCTCCCCGCGAAATGGCAACCTCACCACCAGTGCCGCACACTCTCC TTGAGCTCCTCCAGCAGCTCGAAGGCCACTTACACGCGCTCTTGTCGCCC CAGCCAGCGGTAAATAAGGGAAATGGTGACAGCCATGATAAGTGGCTGCA ACACTTCCAATTGGCTCCTGAGGCATGGGCCGTATGCGTGGAGGGCTTCC GTCTCACCCTCGCAAGCCATCAGCACCAGTCTCTGCAAGAGCAGCAGCAG CTGCACCACCAACACCATCACCACCACCGTCTTTCGCTTTTTCTCGCACA GACCCTTGTCCTGAAAGCCCGCCGATCTTGGCGAGATGGTGGGTTGGCTG ACCACCAAATACAGGAGCTTGCAGCATTACCTTTCCAAATCCTCGCCCTT CAGCCTTCCCTACCTCAGCATTACGACCTCATCGTTACCCAACTATGCCT CGGGCTTTGTGCCGCTGCCTTGACATGTCCACGCATCACACCCGAAAGTC TTTTTGCTCACCTCATGGCATTGGCCTCTGAGGCAGGAAAAGGGGAAAAG GAAGAGGAGGGGAGCGATACTGTGTGTATGCTCCGTCTAAAAGTCCTTGA ACTTTTGCCTGAAGAGGCCCAAAGACGACGCACCCTCTCCCTTCCCGCTG AACGGCGATCTGCCATCCTTCATAACCTGTGCCACGGAGGACTTGAGGGC CCTGCTGGGTACGCCCTTGCATATCTCCTTTCCTCCTCCACCTCCTCCAC CTCTTCCTCCTCCTCCTCCTCTTCCTTCCAGCCCTCGTCCTCGTGGTCCC TTCCTCACTCCTCCCTCCGTGCGGTAGGGGCATGGTTGGAACTGAAAACT GTGTCGTGGAACGATATTTTGAAGCCATTGGTGGTCCCGCACCTCACGGA AATAGTGCTGAGGGAATGTCAGGGACGGAGGGAGGGAGGGAAGGAGGGAG GGCTGGGAGCATCGGCACTGGATCTTTTGACTATCATTGTGACGGCAGCA CCACCTGAAGGACCACCGTCCCTCTTGAAGGAGGAGGAGCAGCAGCAGTG CCTGCGGCCGGGGCAGCAGAGCGTGGAGGTAGGCATGATGCTGCTGCCGT TGCTTCGGAGTGTTTGGGTGTCGGTGGAGGGGGAAGGGCTGCCTGCCCTT GAGTCTTCGGTTGGTCGGGCTTTCCTGGGACTGGTGGTAGCAGTGGGAAA GGCAGGGCTATTGGAGATGGAGGATGGAGAGGACGAGGACGACGGGGAGG GAGGGGAGCGGGAGACGCGAAAGTGGGGCGGTGGGGAAGGGAGGAGGCGG AGAGGAGGAGGAGGAGGAAGGGGGGGAGCGACCGCAGCAGCTTGGCCATT TCCACACGCTGCTGGTGGAGAAGAGGTTCTTCCTCTTCAGAGAGATCCCA TGGCAATCCTGACCCCCCTCCTCCTCACCCTTGAACACGCGCCTCTGGAG CTGGTTTTGCTGACCTTCGAGTTTTGGAATCACCTCGGCTGCAGCAGTTG TACGACGAGCAGCAGCAGCAGCAGCGGCAGCAGCAACAGTGTCGGCAGTA ACGACACGCCCTCTCCACCTTTGGCTTCTACCACAAGAGAAGACCAAACA CTTTCCGCCCCTGCCTCCCTCCTCCTCATCCAGCACCATGCCCTCCGTCA AGCCCTCCCTCGGCTCCTCCACCGCACTGCCTTCCCCCCCTCCTATCCCT CATTCTCCTTGACTGCCCGTGAAGCCCTCCTAGAATTTCGAGAGGAGGCG CGAGACGTCCTGCGTGCCTGGGTTCTGGTCCCCTCCTCCATCCCGCCCTC CCCCCCTTCCTCCTTCACCCTCACCCTGCTGGCCCACGAGACGGTGACGC ACCTCGAGCAGCTGGCAGAGGAGAGCTACTACAATCACCAGCACCAGCAG CAGCAGCAGGGGGAAGCATCCGTCTTTCCCTCCTTCCCTCCACCATGGGC CACTGCCGAGTCCCTCCTCCACGCGCTCACTGCCACTCCGAACACCCACC CCCTCCCTCTTCTCCTCCCTCCCCCTCTCTTGCCCCGCCTCCTCCTCGCC CTAGATTCTCTCCCCTCCCATCCTGCCCTCCTCCGCGCTGCCGTCTTCCT TCTCTCCTCCTTCGCCGACTTCCTGGCCGCCCTCCCTCCCTCCCTCCCTC CCTCCCTCCCCTCCCTCGCTCTCGACCTCTGCCTCCGCTCCTTCTCCTTC TCTCAGGCTTCCACCGAGACCTTTCCTTTCCTCTCAAAACAAGACCATGC TGGGGCTGTTGCACTCCTCAAGCTCACCTCCCTCCCTCCCTCCCTCCATC CCTTCCTCCCCTCTCCCGCCGATCGCCTCACCCTTGCGTATTTCTCCCTG AGACGCCAAGAGGAAGGAGGAAGGGAGGGAGGGAGGGAGGGCTGCCCCCT CACTCCTGCGAGCATAGCCTTAGTGTTGGAGGCTACGGCGAAAGTAGTGC TCGCGACAAGAGACCCGGATAAGCTCGAAGCGCTCGTCGGGCCGATGTGG GCACGGATTGGAGAAGAATTGTGTGGAAGGGAGGGAGGGAAGGAGGGAGG GAGGGAGGGGGATGTGGTGACGCTGGAGTTGGAGGCGATAGAGGTGGTAG TGCGGGCGGCTCGAACACTGATAGTGCAGGGCCAGAAGGCCAAGGCGCCT CCGCCGCCGCAGCAGCAGCAACAACAACAGCAGCAGCAGCAGCAACAACA GGTGGGGGTATCTCCTCCCTCCCTCCCTCTCCTTCCATCTATCGCCTCCG TAGTCGCAGAGAGCTTCGTCGCCCGCGGGGAAGGGTTGACAGCGTTGCTT GGGCTCCAGAGTATCAACTCTCCCTCCCTCCCTCCTTCCTCCCTCTCTTC CCTTTGCCGTAGAAATAAGGGAAATGGGTGGTCGACCGCCTCACTACAGC TTACCACTGCGCTCTTCCGTCTCTTGCAAGTCGAGCTTGAGGGAGGGAGG GAGGGAGGGAGGGAGGGAGGGAGGGTTTCCAACAGGGACAACCTCCGACG CATCTTCTTCCAATGTTTCTCCGCTTGGGCACCTCTGCTCCTCACCTCCA CCACCACCAGCATCTCCCCACCTCCATCTTCCTCCTTCTCCTCCTCCCCC ACTCCCTCCTTCGTCCTCCTTCCTGTCCAGCTGTCTTGGGCGGAGGCTGC GCTTGCCGTTGGTCTCACTTTGGGTACAGATTCAATCAACGCTCCTTGGG AAGTCTACCGCACTCTCTCCCAACGCGCTGCCCATCTCCTCCTCCAGATA GCTCCTCCCTCCCTCATTCCTTCCTTCTTACATGTACAAAGGGAGGACCT AGCTGCCGCGTTCTTTTCTTCATGGACTCGCGTCCTCCTCCTTTTCTTCC CTTCTTCCTCTTTCTCATCCTCGTCCTCCTCCTCTTCCCTGAATGCCATC ACAAGCAGCAATGGCAGAAACACCCTCTCATGTTCCTCCTCCCTTCTTTC TCCATTTTTCCCTCTCATTCTCGCCACCGCTGCCTCGTGTCTAAACCTGC AAGAACGCACCGGCGCCCGAGCCGTCCTCCTCTTCGTCCGCAAGGCCTTC CTCTTCCTCCCTTCGGCCTTTTTCCTTCCTCTTCCCATCATCACCCATCA AAAGGAAAGAATAGAGAGAGGGGAGGATGGACCTCAACAATGCCTTGGCC AGTCCCTCATTTTCGCTCTCCTTTCAGCAGTCTGTGGACACATGCCTTCC TGGGCGCTGGATGACCTCATCCTCACCCTTGTTGGATTCCTTTCCGCCTT CCCTCCACCTCCTTCTTCTTCACTTCCTTACCATCCCTCCTCCTCTTCCT CATCTATCACCATGCAGTGGATGGCATGGGCTATCGCTCTCCCGTATTTC CCGCGGGCTCATGTCAGTGCCCAAGCGCGAAGTCTTTTCATCAACCAAAT CGAGGAATGCATGAGGAAAAAGGACGTTAAAAAGTTCAAAGCGGCTGTGA AGGCCTTTTGTGGGGGCAAGAAAAAGGGGACGGCAGGCATGCCGCCCTCT AGGGGAAGGAAGGGAGGAAGGGAGAAAGAGGACCCGAAAGAAGAGGAACA GATTGACATGAGAATATGAATGAAAATTGTGACAGCTTTTATGTAAAGTA TGGTAATCTTTGACTGTGTAGAAACAGGGATAGAGTACTCACAGAACATT ATCGCAATAGTAAGACAAAAAGAAAAATAACAATAGTG
back to top

Coding sequence (CDS) from alignment at chr23:595742..600279+

>NO23G01610.1 ID=NO23G01610.1|Name=NO23G01610.1|organism=Nannochloropsis oceanica|type=CDS|length=4053bp|location=Sequence derived from alignment at chr23:595742..600279+ (Nannochloropsis oceanica)
ATGGCAACCTCACCACCAGTGCCGCACACTCTCCTTGAGCTCCTCCAGCA
GCTCGAAGGCCACTTACACGCGCTCTTGTCGCCCCAGCCAGCGGTAAATA
AGGGAAATGGTGACAGCCATGATAAGTGGCTGCAACACTTCCAATTGGCT
CCTGAGGCATGGGCCGTATGCGTGGAGGGCTTCCGTCTCACCCTCGCAAG
CCATCAGCACCAGTCTCTGCAAGAGCAGCAGCAGCTGCACCACCAACACC
ATCACCACCACCGTCTTTCGCTTTTTCTCGCACAGACCCTTGTCCTGAAA
GCCCGCCGATCTTGGCGAGATGGTGGGTTGGCTGACCACCAAATACAGGA
GCTTGCAGCATTACCTTTCCAAATCCTCGCCCTTCAGCCTTCCCTACCTC
AGCATTACGACCTCATCGTTACCCAACTATGCCTCGGGCTTTGTGCCGCT
GCCTTGACATGTCCACGCATCACACCCGAAAGTCTTTTTGCTCACCTCAT
GGCATTGGCCTCTGAGGCAGGAAAAGGGGAAAAGGAAGAGGAGGGGAGCG
ATACTGTGTGTATGCTCCGTCTAAAAGTCCTTGAACTTTTGCCTGAAGAG
GCCCAAAGACGACGCACCCTCTCCCTTCCCGCTGAACGGCGATCTGCCAT
CCTTCATAACCTGTGCCACGGAGGACTTGAGGGCCCTGCTGGGTACGCCC
TTGCATATCTCCTTTCCTCCTCCACCTCCTCCACCTCTTCCTCCTCCTCC
TCCTCTTCCTTCCAGCCCTCGTCCTCGTGGTCCCTTCCTCACTCCTCCCT
CCGTGCGGTAGGGGCATGGTTGGAACTGAAAACTGTGTCGTGGAACGATA
TTTTGAAGCCATTGGTGGTCCCGCACCTCACGGAAATAGTGCTGAGGGAA
TGTCAGGGACGGAGGGAGGGAGGGAAGGAGGGAGGGCTGGGAGCATCGGC
ACTGGATCTTTTGACTATCATTGTGACGGCAGCACCACCTGAAGGACCAC
CGTCCCTCTTGAAGGAGGAGGAGCAGCAGCAGTGCCTGCGGCCGGGGCAG
CAGAGCGTGGAGGTAGGCATGATGCTGCTGCCGTTGCTTCGGAGTGTTTG
GGTGTCGGTGGAGGGGGAAGGGCTGCCTGCCCTTGAGTCTTCGGTTGGTC
GGGCTTTCCTGGGACTGGTGGTAGCAGTGGGAAAGGCAGGGCTATTGGAG
ATGGAGGATGGAGAGGACGAGGACGACGGGGAGGGAGGGGAGCGGGAGAC
GCGAAAGTGGGGCGGTGGGGAAGGGAGGAGGCGGAGAGGAGGAGGAGGAG
GAAGGGGGGGAGCGACCGCAGCAGCTTGGCCATTTCCACACGCTGCTGGT
GGAGAAGAGGTTCTTCCTCTTCAGAGAGATCCCATGGCAATCCTGACCCC
CCTCCTCCTCACCCTTGAACACGCGCCTCTGGAGCTGGTTTTGCTGACCT
TCGAGTTTTGGAATCACCTCGGCTGCAGCAGTTGTACGACGAGCAGCAGC
AGCAGCAGCGGCAGCAGCAACAGTGTCGGCAGTAACGACACGCCCTCTCC
ACCTTTGGCTTCTACCACAAGAGAAGACCAAACACTTTCCGCCCCTGCCT
CCCTCCTCCTCATCCAGCACCATGCCCTCCGTCAAGCCCTCCCTCGGCTC
CTCCACCGCACTGCCTTCCCCCCCTCCTATCCCTCATTCTCCTTGACTGC
CCGTGAAGCCCTCCTAGAATTTCGAGAGGAGGCGCGAGACGTCCTGCGTG
CCTGGGTTCTGGTCCCCTCCTCCATCCCGCCCTCCCCCCCTTCCTCCTTC
ACCCTCACCCTGCTGGCCCACGAGACGGTGACGCACCTCGAGCAGCTGGC
AGAGGAGAGCTACTACAATCACCAGCACCAGCAGCAGCAGCAGGGGGAAG
CATCCGTCTTTCCCTCCTTCCCTCCACCATGGGCCACTGCCGAGTCCCTC
CTCCACGCGCTCACTGCCACTCCGAACACCCACCCCCTCCCTCTTCTCCT
CCCTCCCCCTCTCTTGCCCCGCCTCCTCCTCGCCCTAGATTCTCTCCCCT
CCCATCCTGCCCTCCTCCGCGCTGCCGTCTTCCTTCTCTCCTCCTTCGCC
GACTTCCTGGCCGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCTCCCT
CGCTCTCGACCTCTGCCTCCGCTCCTTCTCCTTCTCTCAGGCTTCCACCG
AGACCTTTCCTTTCCTCTCAAAACAAGACCATGCTGGGGCTGTTGCACTC
CTCAAGCTCACCTCCCTCCCTCCCTCCCTCCATCCCTTCCTCCCCTCTCC
CGCCGATCGCCTCACCCTTGCGTATTTCTCCCTGAGACGCCAAGAGGAAG
GAGGAAGGGAGGGAGGGAGGGAGGGCTGCCCCCTCACTCCTGCGAGCATA
GCCTTAGTGTTGGAGGCTACGGCGAAAGTAGTGCTCGCGACAAGAGACCC
GGATAAGCTCGAAGCGCTCGTCGGGCCGATGTGGGCACGGATTGGAGAAG
AATTGTGTGGAAGGGAGGGAGGGAAGGAGGGAGGGAGGGAGGGGGATGTG
GTGACGCTGGAGTTGGAGGCGATAGAGGTGGTAGTGCGGGCGGCTCGAAC
ACTGATAGTGCAGGGCCAGAAGGCCAAGGCGCCTCCGCCGCCGCAGCAGC
AGCAACAACAACAGCAGCAGCAGCAGCAACAACAGGTGGGGGTATCTCCT
CCCTCCCTCCCTCTCCTTCCATCTATCGCCTCCGTAGTCGCAGAGAGCTT
CGTCGCCCGCGGGGAAGGGTTGACAGCGTTGCTTGGGCTCCAGAGTATCA
ACTCTCCCTCCCTCCCTCCTTCCTCCCTCTCTTCCCTTTGCCGTAGAAAT
AAGGGAAATGGGTGGTCGACCGCCTCACTACAGCTTACCACTGCGCTCTT
CCGTCTCTTGCAAGTCGAGCTTGAGGGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGTTTCCAACAGGGACAACCTCCGACGCATCTTCTTCCAATGT
TTCTCCGCTTGGGCACCTCTGCTCCTCACCTCCACCACCACCAGCATCTC
CCCACCTCCATCTTCCTCCTTCTCCTCCTCCCCCACTCCCTCCTTCGTCC
TCCTTCCTGTCCAGCTGTCTTGGGCGGAGGCTGCGCTTGCCGTTGGTCTC
ACTTTGGGTACAGATTCAATCAACGCTCCTTGGGAAGTCTACCGCACTCT
CTCCCAACGCGCTGCCCATCTCCTCCTCCAGATAGCTCCTCCCTCCCTCA
TTCCTTCCTTCTTACATGTACAAAGGGAGGACCTAGCTGCCGCGTTCTTT
TCTTCATGGACTCGCGTCCTCCTCCTTTTCTTCCCTTCTTCCTCTTTCTC
ATCCTCGTCCTCCTCCTCTTCCCTGAATGCCATCACAAGCAGCAATGGCA
GAAACACCCTCTCATGTTCCTCCTCCCTTCTTTCTCCATTTTTCCCTCTC
ATTCTCGCCACCGCTGCCTCGTGTCTAAACCTGCAAGAACGCACCGGCGC
CCGAGCCGTCCTCCTCTTCGTCCGCAAGGCCTTCCTCTTCCTCCCTTCGG
CCTTTTTCCTTCCTCTTCCCATCATCACCCATCAAAAGGAAAGAATAGAG
AGAGGGGAGGATGGACCTCAACAATGCCTTGGCCAGTCCCTCATTTTCGC
TCTCCTTTCAGCAGTCTGTGGACACATGCCTTCCTGGGCGCTGGATGACC
TCATCCTCACCCTTGTTGGATTCCTTTCCGCCTTCCCTCCACCTCCTTCT
TCTTCACTTCCTTACCATCCCTCCTCCTCTTCCTCATCTATCACCATGCA
GTGGATGGCATGGGCTATCGCTCTCCCGTATTTCCCGCGGGCTCATGTCA
GTGCCCAAGCGCGAAGTCTTTTCATCAACCAAATCGAGGAATGCATGAGG
AAAAAGGACGTTAAAAAGTTCAAAGCGGCTGTGAAGGCCTTTTGTGGGGG
CAAGAAAAAGGGGACGGCAGGCATGCCGCCCTCTAGGGGAAGGAAGGGAG
GAAGGGAGAAAGAGGACCCGAAAGAAGAGGAACAGATTGACATGAGAATA
TGA
back to top
Synonyms
Publications