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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr23 | genome | chr23:97065..99647 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO23G00230.1 vs.
Match: KFY09434.1 (hypothetical protein V492_05497 [Pseudogymnoascus sp. VKM F-4246]) HSP 1 Score: 117.5 bits (293), Expect = 1.200e-22 Identity = 64/156 (41.03%), Postives = 93/156 (59.62%), Query Frame = 0
Query: 111 LAVAAAHGHEACVTYLLRRGASVEHTDEEGCTPLYDACKAGHEGVVRLLIQAESDVQRSNARGTSPLICAAGEGHTRVVALLINTLLKEGHADHLDHRNSNGSTALCWSAFYGHTHVTRLLLMAGANPIIANNDGRCPLVKAKEREHEGCIELLQT 267
L+ AA +GHE V LL GA +E ++ TPL+ A + GHE VV+LL+ + ++ + G +PL+CAAG GH +VV LL+ +L+ + G T L W+A G+ V +LLLM GANP DG+ PL+ AK+ EHEG ++LL +
Sbjct: 957 LSRAAQNGHEEVVKLLLNGGAKMETSNMYNQTPLWWAAEKGHEAVVKLLLFKGAQIEAEDRDGQTPLMCAAGNGHEQVVKLLL------AKGANLEFADGAGQTPLSWAARNGNEEVVKLLLMKGANPKSKTIDGQTPLLLAKQNEHEGVVKLLSS 1106
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO23G00230.1 ID=NO23G00230.1|Name=NO23G00230.1|organism=Nannochloropsis oceanica|type=mRNA|length=1488bp
ATGGCGACGCCGCACGGGGGAGCGGGCGCGGAGCAACAAGAGGAGTTACT
GCCACAGCAACATCACCACCATCACGAGGTGGTGGAGGAGGAGCAGCAGC
TACAGCCTGACGCACAACAAGAGGTAGAAAGTTCGCTTGTCCTCTCGACA
GCAGAGTCTCTCGTCCATGCGGCCACCGTTGGCGACCTCCCCTATCTCCA
GCAACACCTTGACACCTTGGAACAAGAACAAGAAGGAGAAGCACTAGAAG
GCCGTAACCCCAATGCGACCTCCTCCCTCCATCCCTTCCCGCGTCCTTCC
TCCCGCCCTCCTCCCAACCTGTCCTCGCTTCTGGCGGTGGCGGCCGCGCA
TGGGCACGAAGCCTGCGTGACTTACCTCCTGAGACGAGGGGCGTCGGTGG
AGCACACCGACGAAGAAGGCTGCACTCCACTTTACGATGCTTGTAAGGCC
GGGCACGAAGGTGTCGTCCGGCTGCTGATCCAGGCGGAGAGCGATGTGCA
GCGAAGCAATGCCCGCGGTACCTCCCCTCTAATTTGTGCGGCGGGAGAAG
GCCACACTAGAGTAGTCGCCCTACTGATAAATACGCTGCTGAAGGAGGGC
CACGCGGATCACCTGGACCACCGCAACAGCAACGGCAGCACGGCCCTCTG
CTGGAGCGCATTTTACGGCCATACGCACGTGACTCGCCTGCTCCTCATGG
CAGGCGCCAATCCCATCATCGCCAATAATGACGGTCGCTGCCCCCTGGTC
AAGGCTAAGGAACGAGAGCACGAGGGCTGCATCGAGCTGCTCCAGACCTT
CCACCTCGAGCCCACCCGCACGTACCTCCTCCATAAACTCCGAGCCATTA
GTAATGTCCGACACGCGCACCAACGGCATTCATCCCCCAGCCATCGGCAG
CAGCAACAGCAGCAGCCCGAGGAGGGAGGGAGGGAGGAAGGGAGAAAGGA
AGGGAGGGAGAACGAGATGCCGCCCTTGGAGACTCTTTCTTCACCTTCCG
CCTTCTTTCCTCTCTCTTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGAAAC
GACCACCGTCGCCAGTGGTGACGCCTGCCCCTCCTCTTTGTCCTCTCCCC
CACCCTCCTTCCCTGCCCTCCTCTCGCCTTCCTCCTCCTTCTCCTCTACT
TCAACCTCCTTCGCTCCCCCTCCCTTCCTTCGAGACAGAATGGAAGAGGG
ATTGGAGCTGCCCTACGTCCGTATCATCGAGGGAGGGAGGGAAGGAGGGA
GGGAAGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGAAGGCCGCGGAGCGG
AGACGAGAAGTGTTGAGATACGTTGTTGGGGGGCAGGGAGGGGGGGAGGG
AGGGGGGGAGGGAGGAGCAATGGCAGCGGAGCATTTTGTAGAGCTGTTAC
AATATATGACCTTGCGCTGGGCGGTTGGAGAGGGGTGA back to topprotein sequence of NO23G00230.1 >NO23G00230.1-protein ID=NO23G00230.1-protein|Name=NO23G00230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=496bp
MATPHGGAGAEQQEELLPQQHHHHHEVVEEEQQLQPDAQQEVESSLVLST
AESLVHAATVGDLPYLQQHLDTLEQEQEGEALEGRNPNATSSLHPFPRPS
SRPPPNLSSLLAVAAAHGHEACVTYLLRRGASVEHTDEEGCTPLYDACKA
GHEGVVRLLIQAESDVQRSNARGTSPLICAAGEGHTRVVALLINTLLKEG
HADHLDHRNSNGSTALCWSAFYGHTHVTRLLLMAGANPIIANNDGRCPLV
KAKEREHEGCIELLQTFHLEPTRTYLLHKLRAISNVRHAHQRHSSPSHRQ
QQQQQPEEGGREEGRKEGRENEMPPLETLSSPSAFFPLSSSSSSSSSSSS
SSSSSSSSSSSSSSSETTTVASGDACPSSLSSPPPSFPALLSPSSSFSST
STSFAPPPFLRDRMEEGLELPYVRIIEGGREGGREGGREGGREGGKAAER
RREVLRYVVGGQGGGEGGGEGGAMAAEHFVELLQYMTLRWAVGEG* back to topmRNA from alignment at chr23:97065..99647+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO23G00230.1 ID=NO23G00230.1|Name=NO23G00230.1|organism=Nannochloropsis oceanica|type=mRNA|length=2583bp|location=Sequence derived from alignment at chr23:97065..99647+ (Nannochloropsis oceanica)
ATGGCGACGCCGCACGGGGGAGCGGGCGCGGAGCAACAAGAGGAGTTACT
GCCACAGCAACATCACCACCATCACGAGGTGGTGGAGGAGGAGCAGCAGC
TACAGCCTGACGCACAACAAGAGGTAGAAAGTTCGCTTGTCCTCTCGACA
GCAGAGTCTCTCGTCCATGCGGCCACCGTTGGCGACCTCCCCTATCTCCA
GCAACACCTTGACACCTTGGAACAAGAACAAGAAGGAGAAGCACTAGAAG
GCCGTAACCCCAATGCGACCTCCTCCCTCCATCCCTTCCCGCGTCCTTCC
TCCCGCCCTCCTCCCAACCTGTCCTCGCTTCTGGCGGTGGCGGCCGCGCA
TGGGCACGAAGCCTGCGTGACTTACCTCCTGAGACGAGGGGCGTCGGTGG
AGCACACCGACGAAGAAGGTACGTCCCTCCGTCTGCTGCGTTCCTTTTTC
CGTCCCTCTCTCCAAAATAGTCCCTCCATCTCTTGTGTCTCTCCCTCTCT
GCCTCCTCCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCC
GCCCCTCCCTTTTGTCATTCACGGGAGCACGTCCGATTTCCTCAACCGTC
TTCCCCCCTCTTTAGGTCACTCATCAAGTCATCCTCCCTCCCTTCCCCCC
CCTCCCCTAGGCTGCACTCCACTTTACGATGCTTGTAAGGCCGGGCACGA
AGGTGTCGTCCGGCTGCTGATCCAGGTGAGAGATGGAGAGAGGAAGAGTG
GAGATAGGGAGGGAGGGAGGAAGGAAGGAAGGAAGGAAGGTATGGAGAGA
GGGAGGGAGGAAAGACCGAATTGTTTGAGAAAGAGAAGAGTAGGGGAACG
CTGGAGACATACTAAAGCGCGTGCAGCTCTCTAACTCCTCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCCCAGGCGGAGAGCGATGTGCAGCGAAGCAATG
CCCGCGGTACCTCCCCTCTAATTTGTGCGGCGGGAGAAGGCCACACTAGA
GTAGTCGCCCTACTGATAAATACGCTGCTGAAGGAGGGTAAGTAGAGAGA
GAGGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGAGGGAGGGAGGGAGGGA
GGGAGGGAGGGAGTGAGGGAGGGGGGCTGGAACGGTCGCACCTCTCACTG
ATTCCTCGATGTGATATAATCTCCCTCCCTCCTCCCCTCCCTCCCCCCCT
CCCTCCTTCCTTCCCGTAGGCCACGCGGATCACCTGGACCACCGCAACAG
CAACGGCAGCACGGCCCTCTGCTGGAGCGCATTTTACGGCCATACGCACG
TGACTCGCCTGCTCCTCATGGCAGGTACGTCGCGTCTTCCCGCCCTCCTT
TCCTCCCGCCCTCCCTCGGTCTATGTCCGGCGTCCCGCCTGTGGAGTCTT
TGCATCCCTCCCTCCCTCCGTCCCTCCCCCCCTCCCTCCCCCCCTCTCCT
CCCGTCATTCGACAAGCACCATCCCAATCTTTTCGACACACCACATGCCC
TTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTATGCAGGCGCCAATC
CCATCATCGCCAATAATGACGGTCGCTGCCCCCTGGTCAAGGCTAAGGAA
CGAGAGCACGAGGGCTGCATCGAGCTGCTCCAGGTAAGCCCTCCCTCCTT
CCCTCCTACCCCCCCTCCCTCCCCCCCTAAAATCTTCCCATTTCATCCCA
CCCCTCACTCTTTCCCATCTTCCTCTCCCTCTCCCTCCGATCTTCAATGT
GTCTCACCCCTCCTTTTTCCTCCCTCACTCTTTTCCCCCTCTCCTCCCCT
CCCTCCCTCTTTCACTCCTCCCCTTGATTGGTTCATCCTACCCCTTCCCT
CCTTCCTTCCCTCCTTCTCTCCCTCCTTCCCTCCCTCTAGACCTTCCACC
TCGAGCCCACCCGCACGTACCTCCTCCATAAACTCCGAGCCATTAGTAAT
GTCCGACACGCGCACCAACGGCATTCATCCCCCAGCCATCGGCAGCAGCA
ACAGCAGCAGCCCGAGGAGGGAGGGAGGGAGGAAGGGAGAAAGGAAGGGA
GGGAGAACGAGATGCCGCCCTTGGAGACTCTTTCTTCACCTTCCGCCTTC
TTTCCTCTCTCTTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGAAACGACCA
CCGTCGCCAGTGGTGACGCCTGCCCCTCCTCTTTGTCCTCTCCCCCACCC
TCCTTCCCTGCCCTCCTCTCGCCTTCCTCCTCCTTCTCCTCTACTTCAAC
CTCCTTCGCTCCCCCTCCCTTCCTTCGAGACAGAATGGAAGAGGGATTGG
AGCTGCCCTACGTCCGTATCATCGAGGGAGGGAGGGAAGGAGGGAGGGAA
GGAGGGAGGGAAGGAGGGAGGGAAGGAGGGAAGGCCGCGGAGCGGAGACG
AGAAGTGTTGAGATACGTTGTTGGGGGGCAGGGAGGGGGGGAGGGAGGGG
GGGAGGGAGGAGCAATGGCAGCGGAGCATTTTGTAGAGCTGTTACAATAT
ATGACCTTGCGCTGGGCGGTTGGAGAGGGGTGA back to topCoding sequence (CDS) from alignment at chr23:97065..99647+ >NO23G00230.1 ID=NO23G00230.1|Name=NO23G00230.1|organism=Nannochloropsis oceanica|type=CDS|length=1488bp|location=Sequence derived from alignment at chr23:97065..99647+ (Nannochloropsis oceanica)
ATGGCGACGCCGCACGGGGGAGCGGGCGCGGAGCAACAAGAGGAGTTACT
GCCACAGCAACATCACCACCATCACGAGGTGGTGGAGGAGGAGCAGCAGC
TACAGCCTGACGCACAACAAGAGGTAGAAAGTTCGCTTGTCCTCTCGACA
GCAGAGTCTCTCGTCCATGCGGCCACCGTTGGCGACCTCCCCTATCTCCA
GCAACACCTTGACACCTTGGAACAAGAACAAGAAGGAGAAGCACTAGAAG
GCCGTAACCCCAATGCGACCTCCTCCCTCCATCCCTTCCCGCGTCCTTCC
TCCCGCCCTCCTCCCAACCTGTCCTCGCTTCTGGCGGTGGCGGCCGCGCA
TGGGCACGAAGCCTGCGTGACTTACCTCCTGAGACGAGGGGCGTCGGTGG
AGCACACCGACGAAGAAGGCTGCACTCCACTTTACGATGCTTGTAAGGCC
GGGCACGAAGGTGTCGTCCGGCTGCTGATCCAGGCGGAGAGCGATGTGCA
GCGAAGCAATGCCCGCGGTACCTCCCCTCTAATTTGTGCGGCGGGAGAAG
GCCACACTAGAGTAGTCGCCCTACTGATAAATACGCTGCTGAAGGAGGGC
CACGCGGATCACCTGGACCACCGCAACAGCAACGGCAGCACGGCCCTCTG
CTGGAGCGCATTTTACGGCCATACGCACGTGACTCGCCTGCTCCTCATGG
CAGGCGCCAATCCCATCATCGCCAATAATGACGGTCGCTGCCCCCTGGTC
AAGGCTAAGGAACGAGAGCACGAGGGCTGCATCGAGCTGCTCCAGACCTT
CCACCTCGAGCCCACCCGCACGTACCTCCTCCATAAACTCCGAGCCATTA
GTAATGTCCGACACGCGCACCAACGGCATTCATCCCCCAGCCATCGGCAG
CAGCAACAGCAGCAGCCCGAGGAGGGAGGGAGGGAGGAAGGGAGAAAGGA
AGGGAGGGAGAACGAGATGCCGCCCTTGGAGACTCTTTCTTCACCTTCCG
CCTTCTTTCCTCTCTCTTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCGAAAC
GACCACCGTCGCCAGTGGTGACGCCTGCCCCTCCTCTTTGTCCTCTCCCC
CACCCTCCTTCCCTGCCCTCCTCTCGCCTTCCTCCTCCTTCTCCTCTACT
TCAACCTCCTTCGCTCCCCCTCCCTTCCTTCGAGACAGAATGGAAGAGGG
ATTGGAGCTGCCCTACGTCCGTATCATCGAGGGAGGGAGGGAAGGAGGGA
GGGAAGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGAAGGCCGCGGAGCGG
AGACGAGAAGTGTTGAGATACGTTGTTGGGGGGCAGGGAGGGGGGGAGGG
AGGGGGGGAGGGAGGAGCAATGGCAGCGGAGCATTTTGTAGAGCTGTTAC
AATATATGACCTTGCGCTGGGCGGTTGGAGAGGGGTGA back to top
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